17-03-17 20:56:58.188 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:56:58.188 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-17 20:56:58.188 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8315 mm, delta = 0.5490 mm
17-03-17 20:56:58.188 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:56:58.188 -07 000000502 INF: FPGA: Recv YRDPOS 153256
17-03-17 20:56:58.198 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:56:58.198 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:56:58.198 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-17 20:56:58.198 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-17 20:56:58.198 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-17 20:56:58.318 -07 000000576 INF: FPGA: Recv YMVTO 154378 873
17-03-17 20:56:58.318 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 112 ms to get response, and 117 ms overall
17-03-17 20:56:58.318 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm)
17-03-17 20:56:58.318 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 873 steps (0.546 mm). Slippage = -0.003 mm (0.00%).
17-03-17 20:56:58.318 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 117 ms, distance = 0.549 mm, average velocity = 4.693 mm/sec
17-03-17 20:57:00.348 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.003063,
17-03-17 20:57:01.318 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:57:01.318 -07 000000576 INF: FPGA: Recv YRDPOS 154381
17-03-17 20:57:01.328 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:57:01.328 -07 000000610 INF: Y Motor: Encoder = 154381 = motor step 120610.2 = 75.3813 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:57:01.338 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000768, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:57:01.338 -07 000000610 INF: Y Motor: Position error after settling = 2 encoder counts (0.001 mm), Delta during settling = 3 counts (0.001 mm)
17-03-17 20:57:01.338 -07 000000610 INF: Y Motor: Moved to 75.3813 after 3155 ms
17-03-17 20:57:01.348 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 60° ===================
17-03-17 20:57:01.348 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-17 20:57:01.348 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-17 20:57:01.348 -07 000000502 INF: FPGA: Recv TEC2TEMP 
17-03-17 20:57:01.358 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:57:01.358 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 20:57:01.358 -07 000000512 INF: FPGA: Recv TEC2EN 
17-03-17 20:57:01.368 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:57:01.368 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 60° ===================
17-03-17 20:57:01.368 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:01.368 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 20:57:01.368 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:01.388 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 20:57:01.388 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-17 20:57:01.388 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 20:57:01.688 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:57:01.708 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 20:57:01.708 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 20:57:01.758 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:01.778 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:57:01.778 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:57:01.828 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:57:01.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=646, R2=670, Total=1316. Warn if over 250 bubbles per interval.
17-03-17 20:57:01.878 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:01.878 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 20:57:01.878 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:01.908 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 20:57:01.908 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 20:57:01.908 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:57:02.038 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 20:57:02.078 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:05.208 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:05.238 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:05.658 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:05.688 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:05.708 -07 000000541 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.98264,
17-03-17 20:57:06.108 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:06.138 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:06.138 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 20:57:06.138 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:06.268 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:06.298 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 20:57:06.298 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 20:57:06.428 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:06.458 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 20:57:06.458 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 20:57:06.458 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:57:06.588 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:57:06.618 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:06.828 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-17 20:57:06.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=648, R2=672, Total=1320. Warn if over 250 bubbles per interval.
17-03-17 20:57:07.048 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:07.078 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:07.078 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:57:07.078 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:08.298 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 20:57:08.298 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-17 20:57:08.298 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:08.318 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:57:08.318 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-17 20:57:08.318 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-17 20:57:08.448 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:57:08.468 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-17 20:57:08.468 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-17 20:57:08.518 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:08.538 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 20:57:08.538 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:57:08.638 -07 000000610 INF: =================== Cycle #45, Pumping Reagent CMS (4) ===================
17-03-17 20:57:08.638 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 20:57:08.638 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:08.668 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 20:57:08.668 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 20:57:08.668 -07 000000610 INF: =================== Cycle #45, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-17 20:57:08.798 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 20:57:08.838 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:10.278 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:10.308 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:10.728 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:10.758 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:10.758 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 20:57:10.758 -07 000000610 INF: =================== Cycle #45, Pumping Reagent CMS (4) ===================
17-03-17 20:57:10.888 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:10.918 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 20:57:10.918 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 20:57:11.048 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:11.068 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.990831,
17-03-17 20:57:11.078 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 20:57:11.078 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 20:57:11.078 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:57:11.208 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:57:11.238 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:11.668 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:11.698 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:11.698 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:57:11.698 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:11.828 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 6
17-03-17 20:57:11.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=6, R2=2, Total=8. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=654, R2=674, Total=1328. Warn if over 250 bubbles per interval.
17-03-17 20:57:12.918 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 20:57:12.918 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 20:57:12.918 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:12.938 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 20:57:12.938 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-17 20:57:12.938 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-17 20:57:13.088 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:57:13.108 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-17 20:57:13.108 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-17 20:57:13.158 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:13.178 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:57:13.178 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:57:13.278 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:13.278 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 20:57:13.278 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:13.308 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 20:57:13.308 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 20:57:13.308 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:57:13.438 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 20:57:13.478 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:14.348 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:14.378 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:14.378 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 20:57:14.378 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:14.508 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:14.538 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 20:57:14.538 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 20:57:14.668 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:14.698 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 20:57:14.698 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 20:57:14.698 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:57:14.828 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:57:14.858 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:15.288 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:15.318 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:15.318 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 20:57:15.318 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:15.318 -07 000000415 INF: WaitCommand(10000) start
17-03-17 20:57:15.318 -07 000000458 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 20:57:15.318 -07 000000458 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 20:57:16.428 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.005817,
17-03-17 20:57:16.538 -07 000000458 INF: AsyncDelayTimer waited 1216ms
17-03-17 20:57:16.538 -07 000000458 INF: LanePump: Xmit /1?\r
17-03-17 20:57:17.188 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 2
17-03-17 20:57:17.188 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=2, R2=3, Total=5. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=656, R2=677, Total=1333. Warn if over 250 bubbles per interval.
17-03-17 20:57:17.198 -07 000000458 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 20:57:17.198 -07 000000458 INF: LanePump: Current Position of Pump is: 1110
17-03-17 20:57:17.328 -07 000000458 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 20:57:17.368 -07 000000458 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:18.898 -07 000000458 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:18.928 -07 000000458 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:19.348 -07 000000458 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:19.378 -07 000000458 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:19.378 -07 000000458 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 20:57:19.378 -07 000000458 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 20:57:19.378 -07 000000458 INF: ===================  ===================
17-03-17 20:57:21.788 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.011254,
17-03-17 20:57:21.828 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 0
17-03-17 20:57:21.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=2, Total=2. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=656, R2=679, Total=1335. Warn if over 250 bubbles per interval.
17-03-17 20:57:25.328 -07 000000415 INF: WaitCommand(10000) end
17-03-17 20:57:25.328 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:25.328 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-17 20:57:25.328 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:25.368 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 20:57:25.368 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 20:57:25.368 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:57:25.498 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-17 20:57:25.538 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:26.838 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 2
17-03-17 20:57:26.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=2, R2=0, Total=2. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=658, R2=679, Total=1337. Warn if over 250 bubbles per interval.
17-03-17 20:57:27.148 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.007176,
17-03-17 20:57:31.668 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:31.698 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:31.828 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 1
17-03-17 20:57:31.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=1, R2=3, Total=4. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=659, R2=682, Total=1341. Warn if over 250 bubbles per interval.
17-03-17 20:57:32.118 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:32.148 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:32.508 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.007176,
17-03-17 20:57:32.568 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:33.498 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:33.918 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:33.948 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:33.948 -07 000000610 INF: LanePump: Waited 8409 ms for pump motion to complete
17-03-17 20:57:33.948 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:34.078 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:34.108 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 20:57:34.108 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 20:57:34.238 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:34.268 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 20:57:34.268 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 20:57:34.268 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:57:34.398 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:57:34.428 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:34.858 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:34.888 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:34.888 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:57:34.888 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:36.108 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 20:57:36.108 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-17 20:57:36.108 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:36.128 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:57:36.128 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-17 20:57:36.128 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-17 20:57:36.338 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:57:36.358 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-17 20:57:36.358 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-17 20:57:36.408 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:36.428 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 20:57:36.428 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:57:36.528 -07 000000610 INF: =================== Cycle #45, Pumping Reagent IMT (1) ===================
17-03-17 20:57:36.528 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 20:57:36.528 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:36.558 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 20:57:36.558 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 20:57:36.558 -07 000000610 INF: =================== Cycle #45, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-17 20:57:36.688 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 20:57:36.728 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:36.828 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 2
17-03-17 20:57:36.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=2, R2=1, Total=3. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=661, R2=683, Total=1344. Warn if over 250 bubbles per interval.
17-03-17 20:57:38.168 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:38.198 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:38.618 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:38.648 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:38.648 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 20:57:38.648 -07 000000610 INF: =================== Cycle #45, Pumping Reagent IMT (1) ===================
17-03-17 20:57:38.778 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:38.808 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 20:57:38.808 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 20:57:38.808 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.004458,
17-03-17 20:57:38.938 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:38.968 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 20:57:38.968 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 20:57:38.968 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:57:39.098 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:57:39.128 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:39.558 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:39.588 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:39.588 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:57:39.588 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:40.808 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-17 20:57:40.808 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 20:57:40.808 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:40.828 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 20:57:40.828 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-17 20:57:40.828 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 20:57:41.058 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:57:41.078 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-17 20:57:41.078 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-17 20:57:41.128 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:57:41.148 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:57:41.148 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:57:41.248 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:41.248 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 20:57:41.248 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:41.278 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 20:57:41.278 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 20:57:41.278 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:57:41.408 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 20:57:41.448 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:57:41.828 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 3
17-03-17 20:57:41.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=3, R2=3, Total=6. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=686, Total=1350. Warn if over 250 bubbles per interval.
17-03-17 20:57:42.318 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:42.348 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:42.348 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-17 20:57:42.348 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:57:42.478 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:42.508 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 20:57:42.508 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 20:57:42.638 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:57:42.668 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 20:57:42.668 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 20:57:42.668 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:57:42.798 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:57:42.828 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:43.258 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:57:43.288 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:57:43.288 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:57:43.288 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:43.288 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 65° ===================
17-03-17 20:57:43.288 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-17 20:57:43.288 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-17 20:57:43.288 -07 000000512 INF: FPGA: Recv TEC2TEMP 
17-03-17 20:57:43.298 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:57:43.298 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 20:57:43.298 -07 000000618 INF: FPGA: Recv TEC2EN 
17-03-17 20:57:43.308 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:57:43.308 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 65° ===================
17-03-17 20:57:43.308 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:57:43.308 -07 000000610 INF: WaitCommand(30000) start
17-03-17 20:57:44.178 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.014009,
17-03-17 20:57:47.228 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 0
17-03-17 20:57:47.228 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=3, Total=3. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:57:49.548 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.028963,
17-03-17 20:57:51.828 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:57:51.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:57:54.918 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.033041,
17-03-17 20:57:56.838 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:57:56.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:00.288 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.016692,
17-03-17 20:58:01.838 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:01.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:05.658 -07 000000433 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.005817,
17-03-17 20:58:06.828 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:06.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:11.028 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.000345,
17-03-17 20:58:11.828 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:11.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:13.318 -07 000000610 INF: WaitCommand(30000) end
17-03-17 20:58:13.318 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:58:13.318 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-17 20:58:13.418 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:13.448 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 20:58:13.448 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 20:58:13.448 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:58:13.578 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-17 20:58:13.618 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:14.158 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:14.188 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:14.188 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-17 20:58:14.188 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:58:14.318 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:14.348 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 20:58:14.348 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 20:58:14.478 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:14.508 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 20:58:14.508 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 20:58:14.508 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:58:14.638 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:58:14.668 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:15.098 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:15.128 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:15.128 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 20:58:15.128 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:58:15.128 -07 000000433 INF: WaitCommand(30000) start
17-03-17 20:58:15.128 -07 000000415 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 20:58:15.128 -07 000000415 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 20:58:16.348 -07 000000415 INF: AsyncDelayTimer waited 1216ms
17-03-17 20:58:16.348 -07 000000415 INF: LanePump: Xmit /1?\r
17-03-17 20:58:16.378 -07 000000415 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 20:58:16.378 -07 000000415 INF: LanePump: Current Position of Pump is: 1920
17-03-17 20:58:16.398 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.997626,
17-03-17 20:58:16.508 -07 000000415 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 20:58:16.548 -07 000000415 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:16.828 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:16.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:18.888 -07 000000415 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:18.918 -07 000000415 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:19.338 -07 000000415 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:19.368 -07 000000415 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:19.368 -07 000000415 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-17 20:58:19.368 -07 000000415 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 20:58:19.368 -07 000000415 INF: ===================  ===================
17-03-17 20:58:21.768 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.003063,
17-03-17 20:58:21.828 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:21.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:26.828 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:26.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:27.138 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.978563,
17-03-17 20:58:31.828 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:31.828 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:32.508 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.000345,
17-03-17 20:58:36.828 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:36.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:37.868 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.983999,
17-03-17 20:58:41.828 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:58:41.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=664, R2=689, Total=1353. Warn if over 250 bubbles per interval.
17-03-17 20:58:43.228 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.981281,
17-03-17 20:58:45.138 -07 000000433 INF: WaitCommand(30000) end
17-03-17 20:58:45.138 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 22° ===================
17-03-17 20:58:45.138 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-17 20:58:45.138 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-17 20:58:45.148 -07 000000512 INF: FPGA: Recv TEC2TEMP 
17-03-17 20:58:45.148 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:58:45.148 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 20:58:45.148 -07 000000618 INF: FPGA: Recv TEC2EN 
17-03-17 20:58:45.158 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:58:45.158 -07 000000610 INF: =================== Cycle #45, Flow Cell Temp 22° ===================
17-03-17 20:58:45.158 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:58:45.168 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:58:45.168 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 20:58:45.168 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:45.198 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 20:58:45.198 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 20:58:45.198 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:58:45.328 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 20:58:45.368 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:46.828 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-17 20:58:46.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=665, R2=689, Total=1354. Warn if over 250 bubbles per interval.
17-03-17 20:58:48.498 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:48.528 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:48.588 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.956714,
17-03-17 20:58:48.948 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:48.978 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:49.398 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:49.428 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:49.428 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 20:58:49.428 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:58:49.558 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:49.588 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 20:58:49.588 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 20:58:49.718 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:49.748 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 20:58:49.748 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 20:58:49.748 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:58:49.878 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:58:49.908 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:50.338 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:50.368 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:50.368 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:58:50.368 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:58:51.588 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 20:58:51.588 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-17 20:58:51.588 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:58:51.608 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:58:51.608 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-17 20:58:51.608 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-17 20:58:51.758 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:58:51.778 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 20:58:51.778 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 20:58:51.828 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:58:51.838 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-17 20:58:51.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=691, Total=1358. Warn if over 250 bubbles per interval.
17-03-17 20:58:51.848 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 20:58:51.848 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:58:51.948 -07 000000610 INF: =================== Cycle #45, Pumping Reagent USM (2) ===================
17-03-17 20:58:51.948 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 20:58:51.948 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:51.978 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 20:58:51.978 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 20:58:51.978 -07 000000610 INF: =================== Cycle #45, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-17 20:58:52.108 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 20:58:52.148 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:53.588 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:53.618 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:53.948 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.963579,
17-03-17 20:58:54.038 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:54.068 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:54.068 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 20:58:54.068 -07 000000610 INF: =================== Cycle #45, Pumping Reagent USM (2) ===================
17-03-17 20:58:54.198 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:54.228 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 20:58:54.228 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 20:58:54.358 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:54.388 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 20:58:54.388 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 20:58:54.388 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:58:54.518 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:58:54.548 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:54.978 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:55.008 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:55.008 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 20:58:55.008 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:58:56.228 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-17 20:58:56.228 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 20:58:56.228 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:58:56.248 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 20:58:56.248 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-17 20:58:56.248 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 20:58:56.398 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:58:56.418 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 20:58:56.418 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 20:58:56.468 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:58:56.488 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:58:56.488 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 20:58:56.588 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:58:56.588 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 20:58:56.588 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:56.618 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 20:58:56.618 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 20:58:56.618 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 20:58:56.748 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 20:58:56.788 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:58:56.838 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-17 20:58:56.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:58:57.658 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:57.688 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:57.688 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 20:58:57.688 -07 000000610 INF: =================== Cycle #45, Pumping Reagent PR2 (3) ===================
17-03-17 20:58:57.818 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:57.848 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 20:58:57.848 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 20:58:57.978 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 20:58:58.008 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 20:58:58.008 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 20:58:58.008 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 20:58:58.138 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 20:58:58.168 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:58.598 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 20:58:58.628 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:58:58.628 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 20:58:58.628 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 20:58:58.628 -07 000000626 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 20:58:58.628 -07 000000512 INF: WaitCommand(10000) start
17-03-17 20:58:58.628 -07 000000626 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 20:58:59.308 -07 000000433 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.99219,
17-03-17 20:58:59.848 -07 000000626 INF: AsyncDelayTimer waited 1214ms
17-03-17 20:58:59.848 -07 000000626 INF: LanePump: Xmit /1?\r
17-03-17 20:58:59.878 -07 000000626 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 20:58:59.878 -07 000000626 INF: LanePump: Current Position of Pump is: 1110
17-03-17 20:59:00.008 -07 000000626 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 20:59:00.048 -07 000000626 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:59:01.578 -07 000000626 INF: LanePump: Xmit /1Q\r
17-03-17 20:59:01.608 -07 000000626 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 20:59:01.838 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:01.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:02.028 -07 000000626 INF: LanePump: Xmit /1Q\r
17-03-17 20:59:02.058 -07 000000626 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 20:59:02.058 -07 000000626 INF: LanePump: Waited 2010 ms for pump motion to complete
17-03-17 20:59:02.058 -07 000000626 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 20:59:02.058 -07 000000626 INF: ===================  ===================
17-03-17 20:59:04.668 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.983999,
17-03-17 20:59:06.838 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:06.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:08.638 -07 000000512 INF: WaitCommand(10000) end
17-03-17 20:59:08.638 -07 000000610 INF: =================== Cycle #45, Imaging ===================
17-03-17 20:59:08.638 -07 000000610 INF: Imaging Cycle 45: ScanTilesCommand Cycle 45 time start.
17-03-17 20:59:08.638 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-17 20:59:08.638 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:59:08.668 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 20:59:08.668 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-17 20:59:08.668 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-17 20:59:08.968 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 20:59:08.988 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 20:59:08.988 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 20:59:09.038 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 20:59:09.058 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 20:59:09.058 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:09.058 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:09.058 -07 000000512 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-17 20:59:09.058 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:09.058 -07 000000512 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-17 20:59:09.058 -07 000000502 INF: FPGA: Recv EXLED1ON 
17-03-17 20:59:09.068 -07 000000512 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 20:59:09.068 -07 000000512 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-17 20:59:09.068 -07 000000433 INF: FPGA: Recv EXLED1ADCR 23103
17-03-17 20:59:09.078 -07 000000512 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:09.078 -07 000000512 INF: RedLED: Using Red data: Photodiode ADC 23103 --> 7.4 mW (old method), or 204.8 mW (new method). Difference = 197.4 mW
17-03-17 20:59:09.078 -07 000000512 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-17 20:59:09.078 -07 000000626 INF: FPGA: Recv EXLED1OFF 
17-03-17 20:59:09.088 -07 000000512 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:09.088 -07 000000512 INF: RedLED: LED was on for 19 ms
17-03-17 20:59:09.088 -07 000000512 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms.
17-03-17 20:59:09.088 -07 000000512 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-17 20:59:09.088 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:09.088 -07 000000512 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-17 20:59:09.088 -07 000000502 INF: FPGA: Recv EXLED2ON 
17-03-17 20:59:09.098 -07 000000512 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 20:59:09.098 -07 000000512 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 20:59:09.098 -07 000000618 INF: FPGA: Recv EXLED1ADCR 2097
17-03-17 20:59:09.108 -07 000000512 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:09.108 -07 000000512 INF: GreenLED: Using Green data: Photodiode ADC 2097 --> 0.9 mW (old method), or 182.2 mW (new method). Difference = 181.3 mW
17-03-17 20:59:09.108 -07 000000512 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-17 20:59:09.108 -07 000000433 INF: FPGA: Recv EXLED2OFF 
17-03-17 20:59:09.118 -07 000000512 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:09.118 -07 000000512 INF: GreenLED: LED was on for 19 ms
17-03-17 20:59:09.118 -07 000000512 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-17 20:59:09.118 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 20:59:09.118 -07 000000618 INF: FPGA: Recv EMCUR 
17-03-17 20:59:09.128 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:09.128 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-17 20:59:09.628 -07 000000618 INF: FPGA: Recv EMOUT
17-03-17 20:59:09.628 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 20:59:09.628 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-17 20:59:09.628 -07 000000433 INF: FPGA: Recv EMCUR 
17-03-17 20:59:09.638 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:09.638 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 20:59:09.638 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38134765625, Z-Position -0.127589135943467. ------
17-03-17 20:59:09.638 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:09.638 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17948 mm
17-03-17 20:59:09.638 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:09.638 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:09.638 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 20:59:09.648 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:09.648 -07 000000626 INF: Y Motor: Moving to 59.9126 mm, started at 75.3813 mm, delta = -15.4687 mm
17-03-17 20:59:09.648 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:09.648 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 39207, sync = True, waitForSettling = False)
17-03-17 20:59:09.648 -07 000000576 INF: Z Motor: Moving to -0.179478 mm, started at -0.127589 mm, distance = -51.89 um
17-03-17 20:59:09.648 -07 000000512 INF: FPGA: Recv YRDPOS 154381
17-03-17 20:59:09.658 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:09.658 -07 000000626 INF: Y Motor: Encoder = 154381 = motor step 120610.2 = 75.3813 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:09.658 -07 000000626 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-17 20:59:09.658 -07 000000626 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 20:59:09.658 -07 000000576 INF: FPGA: Xmit ZDACW 39207\n [Z Motor]
17-03-17 20:59:09.658 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 20:59:09.668 -07 000000576 INF: FPGA: 'ZDACW 39207' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:09.668 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 20:59:09.678 -07 000000626 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 20:59:09.688 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:09.688 -07 000000512 INF: FPGA: Recv ZDACR 39207
17-03-17 20:59:09.698 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 20:59:09.698 -07 000000576 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 20:59:09.868 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 20:59:09.868 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-17 20:59:10.028 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.990831,
17-03-17 20:59:11.358 -07 000000576 INF: FPGA: Recv YMVTO 122703 24776
17-03-17 20:59:11.358 -07 000000626 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1675 ms to get response, and 1705 ms overall
17-03-17 20:59:11.358 -07 000000626 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 20:59:11.358 -07 000000626 INF: Y Motor: To move from 75.381 to 59.913 (-15.469 mm) should take 24750 steps, but required 24776 steps (15.485 mm). Slippage = 0.016 mm (0.00%).
17-03-17 20:59:11.358 -07 000000626 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1705 ms, distance = 15.469 mm, average velocity = 9.073 mm/sec
17-03-17 20:59:11.838 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:11.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:14.208 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:14.208 -07 000000458 INF: FPGA: Recv YRDPOS 122698
17-03-17 20:59:14.218 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:14.218 -07 000000626 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:14.238 -07 000000626 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:14.238 -07 000000626 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-17 20:59:14.238 -07 000000626 INF: Y Motor: Moved to 59.9111 after 4594 ms
17-03-17 20:59:14.238 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.179478 mm (DAC = 39207)
17-03-17 20:59:14.238 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.248 -07 000000576 INF: FPGA: Recv ZSGSRD 37234
17-03-17 20:59:14.248 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 20:59:14.248 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.248 -07 000000512 INF: FPGA: Recv ZSGSRD 37231
17-03-17 20:59:14.258 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.258 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.258 -07 000000576 INF: FPGA: Recv ZSGSRD 37221
17-03-17 20:59:14.268 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.268 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.268 -07 000000458 INF: FPGA: Recv ZSGSRD 37226
17-03-17 20:59:14.278 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.278 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.278 -07 000000576 INF: FPGA: Recv ZSGSRD 37228
17-03-17 20:59:14.288 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.288 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.288 -07 000000458 INF: FPGA: Recv ZSGSRD 37229
17-03-17 20:59:14.298 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:14.298 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.298 -07 000000618 INF: FPGA: Recv ZSGSRD 37228
17-03-17 20:59:14.308 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.308 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.308 -07 000000458 INF: FPGA: Recv ZSGSRD 37223
17-03-17 20:59:14.318 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.318 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.318 -07 000000547 INF: FPGA: Recv ZSGSRD 37236
17-03-17 20:59:14.328 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.328 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:14.328 -07 000000458 INF: FPGA: Recv ZSGSRD 37228
17-03-17 20:59:14.338 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.338 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:14.338 -07 000000576 INF: FPGA: Recv ZPIEZORD 33714
17-03-17 20:59:14.348 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:14.348 -07 000000502 INF: Z Motor: Piezo is near 52.0 V (nominally 0 to 100 V), expect near 59.8 V, since DAC is at 5.983 V. Piezo Error = -7.8 V.
17-03-17 20:59:14.348 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -179.5 um, Read 10 ADC samples: Avg = 37228 (-178.6 uncal um), Error = 0.9 uncal um, Median = 37228 (-178.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 37221 (-178.5 uncal um), Max = 37236 (-178.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 20:59:14.348 -07 000000502 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37228, posNoise = 8, negNoise = 7
17-03-17 20:59:14.348 -07 000000502 INF: Z Motor: After move to -0.179478, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:14.348 -07 000000502 INF: Z Motor: Settle wait time = 4597 ms, measure time = 102 ms (allowed 150 ms), total time = 4699 ms
17-03-17 20:59:14.348 -07 000000502 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:14.398 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4753 ms
17-03-17 20:59:14.398 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:14.398 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:14.398 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:14.398 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:14.398 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:14.398 -07 000000433 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 20:59:14.398 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:14.408 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 20:59:14.408 -07 000000433 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 20:59:14.428 -07 000000433 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 20:59:14.428 -07 000000433 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 20:59:14.428 -07 000000433 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 20:59:14.428 -07 000000433 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 20:59:14.448 -07 000000433 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 20:59:14.448 -07 000000433 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 44 ms.
17-03-17 20:59:14.448 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 20:59:14.488 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 20:59:14.688 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 20:59:14.688 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 20:59:14.688 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 20:59:14.698 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-17 20:59:14.728 -07 000000576 INF: FPGA: Recv @CAMSNAP 280
17-03-17 20:59:14.738 -07 000000458 INF: FPGA: Recv CAMSNAP
17-03-17 20:59:14.738 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 287 ms overall
17-03-17 20:59:14.818 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 125 ms.
17-03-17 20:59:14.818 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:14.818 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 20:59:14.818 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 20:59:14.838 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:14.838 -07 000000433 INF: Image SNR check: start
17-03-17 20:59:14.838 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:14.848 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:14.848 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 20:59:14.848 -07 000000433 INF: Image SNR check: pass  [peak (Max-Min)=63.10]
17-03-17 20:59:14.848 -07 000000433 INF: Autofocus start
17-03-17 20:59:14.848 -07 000000433 INF: MeasureProfile start
17-03-17 20:59:14.858 -07 000000433 INF: MeasureProfile done
17-03-17 20:59:14.858 -07 000000433 INF: X=16  Z correction [um]=0.01042744
17-03-17 20:59:14.858 -07 000000433 INF: Autofocus finished
17-03-17 20:59:15.048 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-17 20:59:15.048 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 20:59:15.048 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.179483921624612. ----------
17-03-17 20:59:15.048 -07 000000610 INF: Cycle	45	Tile	1	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:15.058 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37722, sync = True, waitForSettling = True)
17-03-17 20:59:15.058 -07 000000610 INF: Z Motor: Moving to -0.172680 mm, started at -0.179484 mm, distance = 6.80 um
17-03-17 20:59:15.058 -07 000000610 INF: FPGA: Xmit ZDACW 37722\n [Z Motor]
17-03-17 20:59:15.058 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 20:59:15.068 -07 000000610 INF: FPGA: 'ZDACW 37722' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.078 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:15.078 -07 000000502 INF: FPGA: Recv ZDACR 37722
17-03-17 20:59:15.088 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:15.088 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:15.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.238 -07 000000458 INF: FPGA: Recv ZSGSRD 36169
17-03-17 20:59:15.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 2 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:15.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.248 -07 000000576 INF: FPGA: Recv ZSGSRD 36169
17-03-17 20:59:15.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.258 -07 000000547 INF: FPGA: Recv ZSGSRD 36168
17-03-17 20:59:15.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.268 -07 000000433 INF: FPGA: Recv ZSGSRD 36173
17-03-17 20:59:15.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.278 -07 000000502 INF: FPGA: Recv ZSGSRD 36171
17-03-17 20:59:15.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.288 -07 000000626 INF: FPGA: Recv ZSGSRD 36174
17-03-17 20:59:15.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:15.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.298 -07 000000502 INF: FPGA: Recv ZSGSRD 36177
17-03-17 20:59:15.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.308 -07 000000431 INF: FPGA: Recv ZSGSRD 36166
17-03-17 20:59:15.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.318 -07 000000569 INF: FPGA: Recv ZSGSRD 36173
17-03-17 20:59:15.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:15.328 -07 000000431 INF: FPGA: Recv ZSGSRD 36169
17-03-17 20:59:15.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.338 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:15.338 -07 000000626 INF: FPGA: Recv ZPIEZORD 32296
17-03-17 20:59:15.348 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:15.348 -07 000000610 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.756 V. Piezo Error = -8.6 V.
17-03-17 20:59:15.348 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.7 um, Read 10 ADC samples: Avg = 36171 (-171.8 uncal um), Error = 0.9 uncal um, Median = 36170 (-171.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36166 (-171.8 uncal um), Max = 36177 (-171.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 20:59:15.348 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36171, posNoise = 6, negNoise = 5
17-03-17 20:59:15.348 -07 000000610 INF: Z Motor: After move to -0.172680, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:15.348 -07 000000610 INF: Z Motor: MoveAbsStepped took 290 ms)
17-03-17 20:59:15.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:15.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:15.348 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:15.348 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:15.348 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:15.348 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:15.348 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:15.348 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:15.348 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:15.348 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:15.348 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:15.348 -07 000000547 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 20:59:15.348 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 20:59:15.348 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:15.368 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 20:59:15.368 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 20:59:15.368 -07 000000547 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-17 20:59:15.368 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:15.378 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:15.378 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:15.388 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.996267,
17-03-17 20:59:15.388 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-17 20:59:15.388 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms.
17-03-17 20:59:15.408 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37898 150\n [Camera]
17-03-17 20:59:15.608 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:16.028 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:16.028 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:16.028 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:16.028 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:16.028 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 20:59:16.028 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:16.028 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:16.028 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:16.138 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:16.138 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1050349616, 0x0, 418435064) start.
17-03-17 20:59:16.218 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37898 808
17-03-17 20:59:16.368 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:16.408 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 20:59:16.408 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 20:59:16.408 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:16.418 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 20:59:16.418 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 20:59:16.518 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1050349616, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 20:59:16.518 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 20:59:16.518 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:16.528 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:16.528 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 500 ms.
17-03-17 20:59:16.568 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:16.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:16.578 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:16.578 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:16.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:16.578 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:16.578 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:16.578 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-17 20:59:16.588 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:16.588 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 20:59:16.768 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:16.768 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:16.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37898 150' command took 2 ms to send, 1351 ms to get response, and 1374 ms overall
17-03-17 20:59:16.768 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.173055
17-03-17 20:59:16.768 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17305 mm
17-03-17 20:59:16.768 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:16.768 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37804, sync = True, waitForSettling = False)
17-03-17 20:59:16.768 -07 000000502 INF: Z Motor: Moving to -0.173056 mm, started at -0.172694 mm, distance = -0.36 um
17-03-17 20:59:16.768 -07 000000502 INF: FPGA: Xmit ZDACW 37804\n [Z Motor]
17-03-17 20:59:16.768 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 20:59:16.768 -07 000000480 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-17 20:59:16.778 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:16.778 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 20:59:16.778 -07 000000502 INF: FPGA: 'ZDACW 37804' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:16.778 -07 000000626 INF: FPGA: Recv YRDPOS 122698
17-03-17 20:59:16.788 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 20:59:16.788 -07 000000480 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:16.788 -07 000000480 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:16.788 -07 000000480 INF: Y Motor: Moving 1330 steps2
17-03-17 20:59:16.788 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:16.788 -07 000000438 INF: FPGA: Recv ZDACR 37804
17-03-17 20:59:16.798 -07 000000502 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 20:59:16.798 -07 000000502 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 20:59:16.798 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:16.838 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:16.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:16.978 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 20:59:16.978 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 20:59:16.978 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:16.978 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 398 ms.
17-03-17 20:59:16.988 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 20:59:16.988 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:16.988 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:16.988 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms.
17-03-17 20:59:16.988 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:16.998 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 417 ms.
17-03-17 20:59:17.168 -07 000000547 INF: FPGA: Recv YMVTILE
17-03-17 20:59:17.168 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 20:59:17.198 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:17.208 -07 000000547 INF: FPGA: Recv YRDPOS 124381
17-03-17 20:59:17.208 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 20:59:17.208 -07 000000480 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:17.208 -07 000000480 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 20:59:17.208 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.831 mm, average velocity = 2.143 mm/sec
17-03-17 20:59:18.158 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:18.158 -07 000000626 INF: FPGA: Recv YRDPOS 124382
17-03-17 20:59:18.168 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:18.168 -07 000000480 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:18.188 -07 000000480 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:18.188 -07 000000480 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 20:59:18.188 -07 000000480 INF: Y Motor: Moved to 60.7334 after 1416 ms (table move)
17-03-17 20:59:18.188 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173056 mm (DAC = 37804)
17-03-17 20:59:18.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.188 -07 000000431 INF: FPGA: Recv ZSGSRD 36230
17-03-17 20:59:18.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:18.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.198 -07 000000480 INF: FPGA: Recv ZSGSRD 36219
17-03-17 20:59:18.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.208 -07 000000431 INF: FPGA: Recv ZSGSRD 36226
17-03-17 20:59:18.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.218 -07 000000618 INF: FPGA: Recv ZSGSRD 36224
17-03-17 20:59:18.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.228 -07 000000502 INF: FPGA: Recv ZSGSRD 36237
17-03-17 20:59:18.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.238 -07 000000480 INF: FPGA: Recv ZSGSRD 36229
17-03-17 20:59:18.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.248 -07 000000431 INF: FPGA: Recv ZSGSRD 36233
17-03-17 20:59:18.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.258 -07 000000480 INF: FPGA: Recv ZSGSRD 36231
17-03-17 20:59:18.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.268 -07 000000433 INF: FPGA: Recv ZSGSRD 36230
17-03-17 20:59:18.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.278 -07 000000012 INF: FPGA: Recv ZSGSRD 36225
17-03-17 20:59:18.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.288 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:18.288 -07 000000433 INF: FPGA: Recv ZPIEZORD 32368
17-03-17 20:59:18.298 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.298 -07 000000610 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.7 V, since DAC is at 5.769 V. Piezo Error = -8.5 V.
17-03-17 20:59:18.298 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.1 um, Read 10 ADC samples: Avg = 36228 (-172.2 uncal um), Error = 0.9 uncal um, Median = 36230 (-172.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 36219 (-172.1 uncal um), Max = 36237 (-172.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 20:59:18.298 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36228, posNoise = 9, negNoise = 9
17-03-17 20:59:18.298 -07 000000610 INF: Z Motor: After move to -0.173056, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:18.298 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 105 ms (allowed 150 ms), total time = 1524 ms
17-03-17 20:59:18.298 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:18.348 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-17 20:59:18.348 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:18.348 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.173059709482851. ----------
17-03-17 20:59:18.348 -07 000000610 INF: Cycle	45	Tile	2	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:18.348 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37627, sync = True, waitForSettling = True)
17-03-17 20:59:18.348 -07 000000610 INF: Z Motor: Moving to -0.172245 mm, started at -0.173060 mm, distance = 0.81 um
17-03-17 20:59:18.348 -07 000000610 INF: FPGA: Xmit ZDACW 37627\n [Z Motor]
17-03-17 20:59:18.348 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 20:59:18.358 -07 000000610 INF: FPGA: 'ZDACW 37627' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 20:59:18.358 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:18.358 -07 000000618 INF: FPGA: Recv ZDACR 37627
17-03-17 20:59:18.368 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.368 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:18.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.518 -07 000000576 INF: FPGA: Recv ZSGSRD 36100
17-03-17 20:59:18.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:18.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.528 -07 000000502 INF: FPGA: Recv ZSGSRD 36101
17-03-17 20:59:18.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.538 -07 000000576 INF: FPGA: Recv ZSGSRD 36103
17-03-17 20:59:18.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.548 -07 000000547 INF: FPGA: Recv ZSGSRD 36102
17-03-17 20:59:18.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.558 -07 000000502 INF: FPGA: Recv ZSGSRD 36106
17-03-17 20:59:18.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.568 -07 000000012 INF: FPGA: Recv ZSGSRD 36105
17-03-17 20:59:18.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.578 -07 000000431 INF: FPGA: Recv ZSGSRD 36106
17-03-17 20:59:18.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.588 -07 000000576 INF: FPGA: Recv ZSGSRD 36102
17-03-17 20:59:18.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.598 -07 000000431 INF: FPGA: Recv ZSGSRD 36106
17-03-17 20:59:18.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:18.608 -07 000000502 INF: FPGA: Recv ZSGSRD 36104
17-03-17 20:59:18.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.618 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:18.618 -07 000000431 INF: FPGA: Recv ZPIEZORD 32195
17-03-17 20:59:18.628 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:18.628 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.742 V. Piezo Error = -8.6 V.
17-03-17 20:59:18.628 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36104 (-171.4 uncal um), Error = 0.9 uncal um, Median = 36104 (-171.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 36100 (-171.4 uncal um), Max = 36106 (-171.4 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 20:59:18.628 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36104, posNoise = 2, negNoise = 4
17-03-17 20:59:18.628 -07 000000610 INF: Z Motor: After move to -0.172245, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:18.628 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 20:59:18.628 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:18.628 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:18.628 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:18.628 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:18.628 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:18.628 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:18.628 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:18.628 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:18.628 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:18.628 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:18.628 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:18.628 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:18.638 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 20:59:18.638 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:18.638 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:18.638 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:18.648 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 20:59:18.648 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:18.648 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 20:59:18.648 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:18.658 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37804 150\n [Camera]
17-03-17 20:59:18.858 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:19.278 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:19.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:19.278 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:19.278 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:19.278 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1085771880, 0x0, 391868352) start.
17-03-17 20:59:19.278 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:19.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:19.278 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:19.278 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:19.278 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1121194144, 0x0, 418435064) start.
17-03-17 20:59:19.468 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37804 808
17-03-17 20:59:19.618 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:19.668 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1121194144, 0x0, 418435064) end. Duration was 389 ms.
17-03-17 20:59:19.668 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 20:59:19.668 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:19.678 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:19.678 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1085771880, 0x0, 391868352) end. Duration was 395 ms.
17-03-17 20:59:19.678 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 20:59:19.678 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:19.678 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:19.678 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 20:59:19.678 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 20:59:19.818 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:19.818 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:19.828 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:19.828 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:19.828 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 20:59:19.828 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:19.828 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:19.828 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:19.828 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:19.828 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 20:59:20.018 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 20:59:20.018 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:20.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37804 150' command took 2 ms to send, 1351 ms to get response, and 1361 ms overall
17-03-17 20:59:20.018 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.172400
17-03-17 20:59:20.018 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17240 mm
17-03-17 20:59:20.018 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:20.018 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 20:59:20.018 -07 000000618 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-17 20:59:20.018 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:20.228 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 404 ms.
17-03-17 20:59:20.228 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-17 20:59:20.228 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:20.228 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 404 ms.
17-03-17 20:59:20.228 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-17 20:59:20.228 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:20.228 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:20.228 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-17 20:59:20.238 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:20.238 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-17 20:59:20.248 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 37661, sync = True, waitForSettling = False)
17-03-17 20:59:20.248 -07 000000627 INF: Z Motor: Moving to -0.172401 mm, started at -0.172263 mm, distance = -0.14 um
17-03-17 20:59:20.248 -07 000000627 INF: FPGA: Xmit ZDACW 37661\n [Z Motor]
17-03-17 20:59:20.248 -07 000000480 INF: FPGA: Recv YRDPOS 124382
17-03-17 20:59:20.248 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 20:59:20.248 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 115 ms to get response, and 232 ms overall
17-03-17 20:59:20.248 -07 000000618 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:20.248 -07 000000618 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:20.248 -07 000000618 INF: Y Motor: Moving 1343 steps-20
17-03-17 20:59:20.258 -07 000000627 INF: FPGA: 'ZDACW 37661' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:20.258 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:20.258 -07 000000480 INF: FPGA: Recv ZDACR 37661
17-03-17 20:59:20.268 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:20.268 -07 000000627 INF: Z Motor: MoveAbsStepped took 18 ms (did NOT wait for settling yet))
17-03-17 20:59:20.268 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:20.638 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 20:59:20.638 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 389 ms overall
17-03-17 20:59:20.678 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:20.678 -07 000000480 INF: FPGA: Recv YRDPOS 126083
17-03-17 20:59:20.688 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:20.688 -07 000000618 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:20.688 -07 000000618 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 20:59:20.688 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.839 mm, average velocity = 2.157 mm/sec
17-03-17 20:59:20.758 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.996267,
17-03-17 20:59:21.638 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:21.638 -07 000000569 INF: FPGA: Recv YRDPOS 126083
17-03-17 20:59:21.648 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:21.648 -07 000000618 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:21.668 -07 000000618 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:21.668 -07 000000618 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 20:59:21.668 -07 000000618 INF: Y Motor: Moved to 61.5640 after 1648 ms (table move)
17-03-17 20:59:21.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172401 mm (DAC = 37661)
17-03-17 20:59:21.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.668 -07 000000480 INF: FPGA: Recv ZSGSRD 36126
17-03-17 20:59:21.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:21.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.678 -07 000000627 INF: FPGA: Recv ZSGSRD 36123
17-03-17 20:59:21.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.688 -07 000000431 INF: FPGA: Recv ZSGSRD 36125
17-03-17 20:59:21.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.698 -07 000000627 INF: FPGA: Recv ZSGSRD 36126
17-03-17 20:59:21.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.708 -07 000000626 INF: FPGA: Recv ZSGSRD 36134
17-03-17 20:59:21.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.718 -07 000000431 INF: FPGA: Recv ZSGSRD 36131
17-03-17 20:59:21.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.728 -07 000000627 INF: FPGA: Recv ZSGSRD 36128
17-03-17 20:59:21.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.738 -07 000000569 INF: FPGA: Recv ZSGSRD 36122
17-03-17 20:59:21.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.748 -07 000000626 INF: FPGA: Recv ZSGSRD 36120
17-03-17 20:59:21.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:21.758 -07 000000627 INF: FPGA: Recv ZSGSRD 36133
17-03-17 20:59:21.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:21.768 -07 000000618 INF: FPGA: Recv ZPIEZORD 32278
17-03-17 20:59:21.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:21.778 -07 000000610 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.747 V. Piezo Error = -8.5 V.
17-03-17 20:59:21.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.4 um, Read 10 ADC samples: Avg = 36127 (-171.5 uncal um), Error = 0.9 uncal um, Median = 36126 (-171.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36120 (-171.5 uncal um), Max = 36134 (-171.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 20:59:21.778 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36127, posNoise = 7, negNoise = 7
17-03-17 20:59:21.778 -07 000000610 INF: Z Motor: After move to -0.172401, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:21.778 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 105 ms (allowed 150 ms), total time = 1529 ms
17-03-17 20:59:21.778 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:21.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1806 ms
17-03-17 20:59:21.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:21.828 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.172410864056533. ----------
17-03-17 20:59:21.828 -07 000000610 INF: Cycle	45	Tile	3	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:21.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37484, sync = True, waitForSettling = True)
17-03-17 20:59:21.828 -07 000000610 INF: Z Motor: Moving to -0.171591 mm, started at -0.172411 mm, distance = 0.82 um
17-03-17 20:59:21.838 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:21.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:21.848 -07 000000610 INF: FPGA: Xmit ZDACW 37484\n [Z Motor]
17-03-17 20:59:21.848 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 20:59:21.858 -07 000000610 INF: FPGA: 'ZDACW 37484' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 20:59:21.858 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:21.858 -07 000000458 INF: FPGA: Recv ZDACR 37484
17-03-17 20:59:21.868 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:21.868 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:22.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.018 -07 000000627 INF: FPGA: Recv ZSGSRD 36003
17-03-17 20:59:22.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:22.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.028 -07 000000458 INF: FPGA: Recv ZSGSRD 36007
17-03-17 20:59:22.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.038 -07 000000627 INF: FPGA: Recv ZSGSRD 36000
17-03-17 20:59:22.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.048 -07 000000627 INF: FPGA: Recv ZSGSRD 35996
17-03-17 20:59:22.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.058 -07 000000627 INF: FPGA: Recv ZSGSRD 35999
17-03-17 20:59:22.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.068 -07 000000458 INF: FPGA: Recv ZSGSRD 35997
17-03-17 20:59:22.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.078 -07 000000458 INF: FPGA: Recv ZSGSRD 36003
17-03-17 20:59:22.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.088 -07 000000458 INF: FPGA: Recv ZSGSRD 36001
17-03-17 20:59:22.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.098 -07 000000431 INF: FPGA: Recv ZSGSRD 35999
17-03-17 20:59:22.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:22.108 -07 000000458 INF: FPGA: Recv ZSGSRD 36005
17-03-17 20:59:22.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.118 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:22.118 -07 000000431 INF: FPGA: Recv ZPIEZORD 32108
17-03-17 20:59:22.128 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:22.128 -07 000000610 INF: Z Motor: Piezo is near 48.6 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.720 V. Piezo Error = -8.6 V.
17-03-17 20:59:22.128 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36001 (-170.7 uncal um), Error = 0.9 uncal um, Median = 36000 (-170.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35996 (-170.7 uncal um), Max = 36007 (-170.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 20:59:22.128 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36001, posNoise = 6, negNoise = 5
17-03-17 20:59:22.128 -07 000000610 INF: Z Motor: After move to -0.171591, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:22.128 -07 000000610 INF: Z Motor: MoveAbsStepped took 294 ms)
17-03-17 20:59:22.128 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:22.128 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:22.128 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:22.128 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:22.128 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:22.128 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:22.128 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:22.128 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:22.128 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:22.128 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:22.128 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:22.128 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:22.138 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 20:59:22.138 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:22.138 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:22.138 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:22.148 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 20:59:22.148 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:22.148 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 20:59:22.148 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:22.148 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37661 150\n [Camera]
17-03-17 20:59:22.358 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:22.778 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:22.778 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:22.778 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:22.778 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:22.778 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:22.778 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:22.778 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:22.778 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-17 20:59:22.788 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:22.788 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 20:59:22.968 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37661 808
17-03-17 20:59:23.158 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 367 ms.
17-03-17 20:59:23.158 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms.
17-03-17 20:59:23.158 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:23.158 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 373 ms.
17-03-17 20:59:23.158 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 20:59:23.158 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:23.158 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:23.158 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:23.158 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:23.168 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 20:59:23.168 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:23.318 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:23.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:23.328 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:23.328 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:23.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:23.328 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:23.328 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:23.328 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 20:59:23.328 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:23.328 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 20:59:23.708 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 20:59:23.708 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 20:59:23.708 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:23.708 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 20:59:23.708 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 20:59:23.708 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:23.708 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:23.708 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 20:59:23.718 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:23.718 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 20:59:23.738 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:23.738 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:23.738 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37661 150' command took 2 ms to send, 1579 ms to get response, and 1589 ms overall
17-03-17 20:59:23.748 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 20:59:23.748 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.171601413326671. ------
17-03-17 20:59:23.748 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:23.748 -07 000000431 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17789 mm
17-03-17 20:59:23.748 -07 000000431 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:24.738 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 20:59:24.738 -07 000000502 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-17 20:59:24.738 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:25.738 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:25.738 -07 000000576 INF: FPGA: Recv YRDPOS 126083
17-03-17 20:59:25.738 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1980 ms to get response, and 1984 ms overall
17-03-17 20:59:25.738 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 990 ms to get response, and 998 ms overall
17-03-17 20:59:25.738 -07 000000512 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 20:59:25.738 -07 000000502 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:25.738 -07 000000502 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:25.738 -07 000000502 INF: Y Motor: Moving 1342 steps-18
17-03-17 20:59:25.738 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 38861, sync = True, waitForSettling = False)
17-03-17 20:59:25.738 -07 000000576 INF: Z Motor: Moving to -0.177894 mm, started at -0.171601 mm, distance = -6.29 um
17-03-17 20:59:25.748 -07 000000576 INF: FPGA: Xmit ZDACW 38861\n [Z Motor]
17-03-17 20:59:25.758 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:26.738 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 20:59:26.738 -07 000000433 INF: FPGA: Recv FOCMRRFOC
17-03-17 20:59:26.738 -07 000000576 INF: FPGA: 'ZDACW 38861' command took 0 ms to send, 980 ms to get response, and 997 ms overall
17-03-17 20:59:26.738 -07 000000512 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 994 ms to get response, and 1002 ms overall
17-03-17 20:59:26.738 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 20:59:26.738 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 975 ms to get response, and 1003 ms overall
17-03-17 20:59:26.738 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:26.738 -07 000000433 INF: FPGA: Recv ZDACR 38861
17-03-17 20:59:26.748 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:26.748 -07 000000576 INF: Z Motor: MoveAbsStepped took 1007 ms (did NOT wait for settling yet))
17-03-17 20:59:26.778 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:26.778 -07 000000576 INF: FPGA: Recv YRDPOS 127786
17-03-17 20:59:26.788 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:26.788 -07 000000502 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:26.788 -07 000000502 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 20:59:26.788 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 1003 ms, distance = 0.839 mm, average velocity = 0.836 mm/sec
17-03-17 20:59:26.838 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:26.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:27.048 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.981281,
17-03-17 20:59:27.738 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:27.738 -07 000000576 INF: FPGA: Recv YRDPOS 127786
17-03-17 20:59:27.748 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.748 -07 000000502 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:27.768 -07 000000502 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:27.768 -07 000000502 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 20:59:27.768 -07 000000502 INF: Y Motor: Moved to 62.3955 after 3030 ms (table move)
17-03-17 20:59:27.768 -07 000000431 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177894 mm (DAC = 38861)
17-03-17 20:59:27.768 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.768 -07 000000512 INF: FPGA: Recv ZSGSRD 36989
17-03-17 20:59:27.778 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:27.778 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.778 -07 000000502 INF: FPGA: Recv ZSGSRD 36983
17-03-17 20:59:27.788 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.788 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.788 -07 000000576 INF: FPGA: Recv ZSGSRD 36983
17-03-17 20:59:27.798 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.798 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.798 -07 000000502 INF: FPGA: Recv ZSGSRD 36980
17-03-17 20:59:27.808 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.808 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.808 -07 000000576 INF: FPGA: Recv ZSGSRD 36981
17-03-17 20:59:27.818 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.818 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.818 -07 000000502 INF: FPGA: Recv ZSGSRD 36981
17-03-17 20:59:27.828 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.828 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.828 -07 000000576 INF: FPGA: Recv ZSGSRD 36983
17-03-17 20:59:27.838 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.838 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.838 -07 000000502 INF: FPGA: Recv ZSGSRD 36977
17-03-17 20:59:27.848 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.848 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.848 -07 000000576 INF: FPGA: Recv ZSGSRD 36984
17-03-17 20:59:27.858 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.858 -07 000000431 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:27.858 -07 000000547 INF: FPGA: Recv ZSGSRD 36983
17-03-17 20:59:27.868 -07 000000431 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.868 -07 000000431 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:27.868 -07 000000576 INF: FPGA: Recv ZPIEZORD 33414
17-03-17 20:59:27.878 -07 000000431 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:27.878 -07 000000431 INF: Z Motor: Piezo is near 51.4 V (nominally 0 to 100 V), expect near 59.3 V, since DAC is at 5.930 V. Piezo Error = -7.9 V.
17-03-17 20:59:27.878 -07 000000431 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.9 um, Read 10 ADC samples: Avg = 36982 (-177.0 uncal um), Error = 0.9 uncal um, Median = 36983 (-177.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36977 (-177.0 uncal um), Max = 36989 (-177.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 20:59:27.878 -07 000000431 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36982, posNoise = 7, negNoise = 5
17-03-17 20:59:27.878 -07 000000431 INF: Z Motor: After move to -0.177894, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:27.878 -07 000000431 INF: Z Motor: Settle wait time = 2033 ms, measure time = 104 ms (allowed 150 ms), total time = 2137 ms
17-03-17 20:59:27.878 -07 000000431 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:27.928 -07 000000431 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4173 ms
17-03-17 20:59:27.928 -07 000000431 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:27.928 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:27.928 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:27.928 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:27.928 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:27.928 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 20:59:27.928 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:27.928 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:27.928 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 20:59:27.938 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 20:59:27.938 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 20:59:27.948 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 20:59:27.948 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 20:59:27.948 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 20:59:27.998 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 20:59:28.198 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 20:59:28.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 20:59:28.198 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 20:59:28.198 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 675221432, 0x0, 559484976) start.
17-03-17 20:59:28.238 -07 000000438 INF: FPGA: Recv @CAMSNAP 280
17-03-17 20:59:28.238 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-17 20:59:28.238 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 284 ms overall
17-03-17 20:59:28.328 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 675221432, 0x0, 559484976) end. Duration was 128 ms.
17-03-17 20:59:28.328 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:28.328 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 20:59:28.328 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 20:59:28.338 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:28.338 -07 000000433 INF: Autofocus start
17-03-17 20:59:28.338 -07 000000433 INF: MeasureProfile start
17-03-17 20:59:28.338 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:28.348 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:28.348 -07 000000576 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 20:59:28.348 -07 000000433 INF: MeasureProfile done
17-03-17 20:59:28.348 -07 000000433 INF: X=16  Z correction [um]=0.01042744
17-03-17 20:59:28.348 -07 000000433 INF: Autofocus finished
17-03-17 20:59:28.548 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-17 20:59:28.548 -07 000000576 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 20:59:28.548 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.177903565437739. ----------
17-03-17 20:59:28.548 -07 000000610 INF: Cycle	45	Tile	4	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:28.558 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37376, sync = True, waitForSettling = True)
17-03-17 20:59:28.558 -07 000000610 INF: Z Motor: Moving to -0.171096 mm, started at -0.177904 mm, distance = 6.81 um
17-03-17 20:59:28.558 -07 000000610 INF: FPGA: Xmit ZDACW 37376\n [Z Motor]
17-03-17 20:59:28.558 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 20:59:28.568 -07 000000610 INF: FPGA: 'ZDACW 37376' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:28.568 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:28.568 -07 000000438 INF: FPGA: Recv ZDACR 37376
17-03-17 20:59:28.578 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.578 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:28.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.728 -07 000000458 INF: FPGA: Recv ZSGSRD 35925
17-03-17 20:59:28.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.738 -07 000000433 INF: FPGA: Recv ZSGSRD 35925
17-03-17 20:59:28.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.748 -07 000000431 INF: FPGA: Recv ZSGSRD 35922
17-03-17 20:59:28.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.758 -07 000000438 INF: FPGA: Recv ZSGSRD 35919
17-03-17 20:59:28.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.768 -07 000000547 INF: FPGA: Recv ZSGSRD 35923
17-03-17 20:59:28.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.778 -07 000000502 INF: FPGA: Recv ZSGSRD 35929
17-03-17 20:59:28.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.788 -07 000000547 INF: FPGA: Recv ZSGSRD 35926
17-03-17 20:59:28.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.798 -07 000000433 INF: FPGA: Recv ZSGSRD 35918
17-03-17 20:59:28.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.808 -07 000000627 INF: FPGA: Recv ZSGSRD 35927
17-03-17 20:59:28.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:28.818 -07 000000576 INF: FPGA: Recv ZSGSRD 35932
17-03-17 20:59:28.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.828 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:28.828 -07 000000547 INF: FPGA: Recv ZPIEZORD 31997
17-03-17 20:59:28.838 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:28.838 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.703 V. Piezo Error = -8.7 V.
17-03-17 20:59:28.838 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35925 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35925 (-170.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35918 (-170.2 uncal um), Max = 35932 (-170.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 20:59:28.838 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35925, posNoise = 7, negNoise = 7
17-03-17 20:59:28.838 -07 000000610 INF: Z Motor: After move to -0.171096, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:28.838 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 20:59:28.838 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:28.838 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:28.838 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:28.838 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:28.838 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:28.838 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:28.838 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:28.838 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:28.838 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:28.838 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:28.838 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:28.838 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:28.848 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 20:59:28.848 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:28.848 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 20:59:28.848 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:28.858 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 20:59:28.858 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 20:59:28.858 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 20:59:28.858 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 20:59:28.868 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37552 150\n [Camera]
17-03-17 20:59:29.068 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:29.488 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:29.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:29.488 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:29.488 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:29.488 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 20:59:29.488 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:29.488 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:29.488 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:29.488 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:29.488 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 1051856944, 0x0, 418435064) start.
17-03-17 20:59:29.678 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37552 808
17-03-17 20:59:29.828 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:29.878 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 20:59:29.878 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 20:59:29.878 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:29.878 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:29.878 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 20:59:29.878 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 1051856944, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 20:59:29.878 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 20:59:29.878 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:29.888 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:29.888 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 20:59:30.028 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:30.028 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:30.038 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:30.148 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:30.148 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:30.148 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:30.148 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:30.148 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1087279208, 0x0, 391868352) start.
17-03-17 20:59:30.158 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:30.158 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 20:59:30.228 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:30.228 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:30.228 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37552 150' command took 2 ms to send, 1351 ms to get response, and 1360 ms overall
17-03-17 20:59:30.228 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171649
17-03-17 20:59:30.228 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17165 mm
17-03-17 20:59:30.228 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:30.228 -07 000000458 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 20:59:30.228 -07 000000458 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-17 20:59:30.228 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:30.228 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 37497, sync = True, waitForSettling = False)
17-03-17 20:59:30.228 -07 000000438 INF: Z Motor: Moving to -0.171650 mm, started at -0.171113 mm, distance = -0.54 um
17-03-17 20:59:30.228 -07 000000512 INF: FPGA: Recv YRDPOS 127787
17-03-17 20:59:30.238 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:30.238 -07 000000458 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:30.238 -07 000000438 INF: FPGA: Xmit ZDACW 37497\n [Z Motor]
17-03-17 20:59:30.238 -07 000000458 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:30.238 -07 000000458 INF: Y Motor: Moving 1339 steps-15
17-03-17 20:59:30.238 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 20:59:30.248 -07 000000438 INF: FPGA: 'ZDACW 37497' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 20:59:30.248 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:30.248 -07 000000433 INF: FPGA: Recv ZDACR 37497
17-03-17 20:59:30.258 -07 000000458 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:30.258 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:30.258 -07 000000438 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-17 20:59:30.528 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 20:59:30.528 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 20:59:30.528 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:30.528 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1087279208, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 20:59:30.528 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 20:59:30.528 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:30.528 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:30.538 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:30.538 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 500 ms.
17-03-17 20:59:30.538 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 20:59:30.628 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 20:59:30.628 -07 000000458 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-17 20:59:30.678 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:30.678 -07 000000512 INF: FPGA: Recv YRDPOS 129483
17-03-17 20:59:30.688 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:30.688 -07 000000458 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:30.688 -07 000000458 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 20:59:30.688 -07 000000458 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.837 mm, average velocity = 2.119 mm/sec
17-03-17 20:59:31.638 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:31.638 -07 000000512 INF: FPGA: Recv YRDPOS 129484
17-03-17 20:59:31.648 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.648 -07 000000458 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:31.668 -07 000000458 INF: Y Motor: After move to 63.232609, error = -0.007999, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:31.668 -07 000000458 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 20:59:31.668 -07 000000458 INF: Y Motor: Moved to 63.2246 after 1438 ms (table move)
17-03-17 20:59:31.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171650 mm (DAC = 37497)
17-03-17 20:59:31.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.668 -07 000000512 INF: FPGA: Recv ZSGSRD 36006
17-03-17 20:59:31.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:31.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.678 -07 000000458 INF: FPGA: Recv ZSGSRD 36008
17-03-17 20:59:31.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.688 -07 000000512 INF: FPGA: Recv ZSGSRD 36004
17-03-17 20:59:31.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.698 -07 000000458 INF: FPGA: Recv ZSGSRD 36022
17-03-17 20:59:31.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.708 -07 000000627 INF: FPGA: Recv ZSGSRD 36008
17-03-17 20:59:31.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.718 -07 000000458 INF: FPGA: Recv ZSGSRD 36014
17-03-17 20:59:31.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.728 -07 000000627 INF: FPGA: Recv ZSGSRD 36008
17-03-17 20:59:31.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.738 -07 000000627 INF: FPGA: Recv ZSGSRD 36010
17-03-17 20:59:31.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:31.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.748 -07 000000576 INF: FPGA: Recv ZSGSRD 36013
17-03-17 20:59:31.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.758 -07 000000576 INF: FPGA: Recv ZSGSRD 36007
17-03-17 20:59:31.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:31.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:31.768 -07 000000627 INF: FPGA: Recv ZPIEZORD 32132
17-03-17 20:59:31.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.778 -07 000000610 INF: Z Motor: Piezo is near 48.6 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.722 V. Piezo Error = -8.6 V.
17-03-17 20:59:31.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.7 um, Read 10 ADC samples: Avg = 36010 (-170.8 uncal um), Error = 0.9 uncal um, Median = 36008 (-170.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 36004 (-170.7 uncal um), Max = 36022 (-170.9 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:31.778 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36010, posNoise = 12, negNoise = 6
17-03-17 20:59:31.778 -07 000000610 INF: Z Motor: After move to -0.171650, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:31.778 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 104 ms (allowed 150 ms), total time = 1544 ms
17-03-17 20:59:31.778 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:31.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-17 20:59:31.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:31.828 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.224609375, Z-position -0.171659231235947. ----------
17-03-17 20:59:31.828 -07 000000610 INF: Cycle	45	Tile	5	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:31.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37320, sync = True, waitForSettling = True)
17-03-17 20:59:31.828 -07 000000610 INF: Z Motor: Moving to -0.170840 mm, started at -0.171659 mm, distance = 0.82 um
17-03-17 20:59:31.828 -07 000000610 INF: FPGA: Xmit ZDACW 37320\n [Z Motor]
17-03-17 20:59:31.828 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 20:59:31.838 -07 000000610 INF: FPGA: 'ZDACW 37320' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:31.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:31.838 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:31.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:31.838 -07 000000502 INF: FPGA: Recv ZDACR 37320
17-03-17 20:59:31.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:31.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:31.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:31.998 -07 000000458 INF: FPGA: Recv ZSGSRD 35887
17-03-17 20:59:32.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:32.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.008 -07 000000502 INF: FPGA: Recv ZSGSRD 35884
17-03-17 20:59:32.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.018 -07 000000458 INF: FPGA: Recv ZSGSRD 35886
17-03-17 20:59:32.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.028 -07 000000512 INF: FPGA: Recv ZSGSRD 35886
17-03-17 20:59:32.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.038 -07 000000576 INF: FPGA: Recv ZSGSRD 35878
17-03-17 20:59:32.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.048 -07 000000627 INF: FPGA: Recv ZSGSRD 35885
17-03-17 20:59:32.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.058 -07 000000576 INF: FPGA: Recv ZSGSRD 35883
17-03-17 20:59:32.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.068 -07 000000458 INF: FPGA: Recv ZSGSRD 35884
17-03-17 20:59:32.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.078 -07 000000627 INF: FPGA: Recv ZSGSRD 35886
17-03-17 20:59:32.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:32.098 -07 000000012 INF: FPGA: Recv ZSGSRD 35889
17-03-17 20:59:32.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:32.108 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:32.108 -07 000000433 INF: FPGA: Recv ZPIEZORD 31953
17-03-17 20:59:32.118 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:32.118 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.695 V. Piezo Error = -8.7 V.
17-03-17 20:59:32.118 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35885 (-170.0 uncal um), Error = 0.9 uncal um, Median = 35886 (-170.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35878 (-169.9 uncal um), Max = 35889 (-170.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 20:59:32.118 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35885, posNoise = 4, negNoise = 7
17-03-17 20:59:32.118 -07 000000610 INF: Z Motor: After move to -0.170840, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:32.118 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-17 20:59:32.118 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:32.118 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:32.118 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:32.118 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:32.118 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:32.118 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:32.118 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:32.118 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:32.118 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 20:59:32.118 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:32.118 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:32.118 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:32.128 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:32.128 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:32.128 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 20:59:32.128 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:32.138 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 20:59:32.138 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:32.138 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 20:59:32.138 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 20:59:32.148 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37497 150\n [Camera]
17-03-17 20:59:32.348 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:32.408 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.993549,
17-03-17 20:59:32.768 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:32.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:32.768 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:32.768 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:32.768 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:32.768 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:32.768 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:32.768 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 20:59:32.778 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:32.778 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 20:59:32.958 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37497 808
17-03-17 20:59:33.108 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:33.168 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 397 ms.
17-03-17 20:59:33.168 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 20:59:33.168 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:33.178 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 398 ms.
17-03-17 20:59:33.178 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 20:59:33.178 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:33.178 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:33.178 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 20:59:33.178 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:33.188 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-17 20:59:33.308 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:33.308 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:33.318 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:33.318 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:33.318 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:33.318 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:33.428 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:33.428 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1051856944, 0x0, 391868352) start.
17-03-17 20:59:33.428 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:33.438 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 20:59:33.508 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 20:59:33.508 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:33.508 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37497 150' command took 2 ms to send, 1351 ms to get response, and 1361 ms overall
17-03-17 20:59:33.508 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.171254
17-03-17 20:59:33.508 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17125 mm
17-03-17 20:59:33.508 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:33.508 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 20:59:33.508 -07 000000626 INF: Y Motor: Moving to 64.0626 mm, started at 63.2246 mm, delta = 0.8380 mm
17-03-17 20:59:33.508 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 37410, sync = True, waitForSettling = False)
17-03-17 20:59:33.508 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:33.508 -07 000000627 INF: Z Motor: Moving to -0.171252 mm, started at -0.170856 mm, distance = -0.40 um
17-03-17 20:59:33.508 -07 000000502 INF: FPGA: Recv YRDPOS 129484
17-03-17 20:59:33.518 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:33.518 -07 000000626 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:33.518 -07 000000626 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:33.518 -07 000000626 INF: Y Motor: Moving 1341 steps-17
17-03-17 20:59:33.518 -07 000000627 INF: FPGA: Xmit ZDACW 37410\n [Z Motor]
17-03-17 20:59:33.518 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 20:59:33.528 -07 000000627 INF: FPGA: 'ZDACW 37410' command took 1 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 20:59:33.528 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:33.528 -07 000000576 INF: FPGA: Recv ZDACR 37410
17-03-17 20:59:33.538 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:33.538 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:33.538 -07 000000627 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 20:59:33.818 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 20:59:33.818 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 20:59:33.818 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:33.818 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1051856944, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 20:59:33.818 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 20:59:33.818 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:33.818 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:33.818 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:33.818 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 507 ms.
17-03-17 20:59:33.828 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-17 20:59:33.908 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 20:59:33.908 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 20:59:33.948 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:33.948 -07 000000458 INF: FPGA: Recv YRDPOS 131188
17-03-17 20:59:33.958 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:33.958 -07 000000626 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:33.958 -07 000000626 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-17 20:59:33.958 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec
17-03-17 20:59:34.908 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:34.908 -07 000000627 INF: FPGA: Recv YRDPOS 131189
17-03-17 20:59:34.918 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:34.918 -07 000000626 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:34.938 -07 000000626 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:34.938 -07 000000626 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 20:59:34.938 -07 000000626 INF: Y Motor: Moved to 64.0571 after 1424 ms (table move)
17-03-17 20:59:34.938 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171252 mm (DAC = 37410)
17-03-17 20:59:34.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.938 -07 000000502 INF: FPGA: Recv ZSGSRD 35949
17-03-17 20:59:34.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:34.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.948 -07 000000626 INF: FPGA: Recv ZSGSRD 35942
17-03-17 20:59:34.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:34.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.958 -07 000000012 INF: FPGA: Recv ZSGSRD 35950
17-03-17 20:59:34.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:34.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.968 -07 000000458 INF: FPGA: Recv ZSGSRD 35959
17-03-17 20:59:34.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:34.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.978 -07 000000576 INF: FPGA: Recv ZSGSRD 35949
17-03-17 20:59:34.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:34.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.988 -07 000000502 INF: FPGA: Recv ZSGSRD 35950
17-03-17 20:59:34.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:34.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:34.998 -07 000000626 INF: FPGA: Recv ZSGSRD 35947
17-03-17 20:59:35.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.008 -07 000000458 INF: FPGA: Recv ZSGSRD 35948
17-03-17 20:59:35.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.018 -07 000000627 INF: FPGA: Recv ZSGSRD 35940
17-03-17 20:59:35.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.028 -07 000000502 INF: FPGA: Recv ZSGSRD 35938
17-03-17 20:59:35.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.038 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:35.038 -07 000000627 INF: FPGA: Recv ZPIEZORD 32070
17-03-17 20:59:35.048 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.048 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.708 V. Piezo Error = -8.6 V.
17-03-17 20:59:35.048 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35947 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35948 (-170.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 35938 (-170.3 uncal um), Max = 35959 (-170.5 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 20:59:35.048 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35947, posNoise = 12, negNoise = 9
17-03-17 20:59:35.048 -07 000000610 INF: Z Motor: After move to -0.171252, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:35.048 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 108 ms (allowed 150 ms), total time = 1534 ms
17-03-17 20:59:35.048 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:35.098 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-17 20:59:35.098 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:35.098 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.171254505871016. ----------
17-03-17 20:59:35.098 -07 000000610 INF: Cycle	45	Tile	6	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:35.098 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37234, sync = True, waitForSettling = True)
17-03-17 20:59:35.098 -07 000000610 INF: Z Motor: Moving to -0.170446 mm, started at -0.171255 mm, distance = 0.81 um
17-03-17 20:59:35.098 -07 000000610 INF: FPGA: Xmit ZDACW 37234\n [Z Motor]
17-03-17 20:59:35.098 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 20:59:35.108 -07 000000610 INF: FPGA: 'ZDACW 37234' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:35.108 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:35.108 -07 000000012 INF: FPGA: Recv ZDACR 37234
17-03-17 20:59:35.118 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.118 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:35.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.268 -07 000000502 INF: FPGA: Recv ZSGSRD 35825
17-03-17 20:59:35.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:35.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.278 -07 000000458 INF: FPGA: Recv ZSGSRD 35826
17-03-17 20:59:35.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.288 -07 000000512 INF: FPGA: Recv ZSGSRD 35825
17-03-17 20:59:35.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.298 -07 000000626 INF: FPGA: Recv ZSGSRD 35822
17-03-17 20:59:35.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.308 -07 000000458 INF: FPGA: Recv ZSGSRD 35822
17-03-17 20:59:35.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.318 -07 000000576 INF: FPGA: Recv ZSGSRD 35821
17-03-17 20:59:35.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.328 -07 000000627 INF: FPGA: Recv ZSGSRD 35824
17-03-17 20:59:35.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.338 -07 000000433 INF: FPGA: Recv ZSGSRD 35821
17-03-17 20:59:35.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.348 -07 000000627 INF: FPGA: Recv ZSGSRD 35821
17-03-17 20:59:35.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:35.358 -07 000000576 INF: FPGA: Recv ZSGSRD 35825
17-03-17 20:59:35.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.368 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:35.368 -07 000000458 INF: FPGA: Recv ZPIEZORD 31850
17-03-17 20:59:35.378 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:35.378 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -8.8 V.
17-03-17 20:59:35.378 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35823 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35823 (-169.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 35821 (-169.6 uncal um), Max = 35826 (-169.6 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 20:59:35.378 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35823, posNoise = 3, negNoise = 2
17-03-17 20:59:35.378 -07 000000610 INF: Z Motor: After move to -0.170446, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:35.378 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 20:59:35.378 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:35.378 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:35.378 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:35.378 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:35.378 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:35.378 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:35.378 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:35.378 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:35.378 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:35.378 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:35.378 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:35.378 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:35.388 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 20:59:35.388 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:35.388 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:35.388 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:35.398 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 20:59:35.398 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 20:59:35.398 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 20:59:35.398 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 20:59:35.398 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37410 150\n [Camera]
17-03-17 20:59:35.598 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:36.028 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:36.028 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:36.028 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:36.028 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:36.028 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:36.028 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:36.028 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:36.028 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 20:59:36.028 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:36.028 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 20:59:36.218 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37410 808
17-03-17 20:59:36.368 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:36.428 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 20:59:36.428 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 20:59:36.428 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:36.428 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 397 ms.
17-03-17 20:59:36.428 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 20:59:36.428 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:36.428 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:36.428 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 20:59:36.428 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:36.438 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-17 20:59:36.568 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:36.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:36.568 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:36.568 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:36.568 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1087279208, 0x0, 391868352) start.
17-03-17 20:59:36.578 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:36.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:36.578 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:36.578 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:36.578 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1122701472, 0x0, 418435064) start.
17-03-17 20:59:36.768 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP 1355
17-03-17 20:59:36.768 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:36.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37410 150' command took 2 ms to send, 1352 ms to get response, and 1362 ms overall
17-03-17 20:59:36.768 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170942
17-03-17 20:59:36.768 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17094 mm
17-03-17 20:59:36.768 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:36.768 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37342, sync = True, waitForSettling = False)
17-03-17 20:59:36.768 -07 000000512 INF: Z Motor: Moving to -0.170941 mm, started at -0.170458 mm, distance = -0.48 um
17-03-17 20:59:36.768 -07 000000512 INF: FPGA: Xmit ZDACW 37342\n [Z Motor]
17-03-17 20:59:36.768 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 20:59:36.768 -07 000000576 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-17 20:59:36.768 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 20:59:36.778 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:36.778 -07 000000512 INF: FPGA: 'ZDACW 37342' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:36.778 -07 000000433 INF: FPGA: Recv YRDPOS 131189
17-03-17 20:59:36.788 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 20:59:36.788 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:36.788 -07 000000576 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:36.788 -07 000000576 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:36.788 -07 000000576 INF: Y Motor: Moving 1337 steps-12
17-03-17 20:59:36.788 -07 000000433 INF: FPGA: Recv ZDACR 37342
17-03-17 20:59:36.798 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:36.798 -07 000000512 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 20:59:36.798 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:36.838 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:36.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:36.958 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1087279208, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 20:59:36.958 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 20:59:36.958 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:36.958 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1122701472, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 20:59:36.958 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 20:59:36.958 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:36.958 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:36.958 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 20:59:36.958 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:36.968 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 20:59:37.168 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 20:59:37.168 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 20:59:37.208 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:37.208 -07 000000433 INF: FPGA: Recv YRDPOS 132872
17-03-17 20:59:37.218 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:37.218 -07 000000576 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:37.218 -07 000000576 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 20:59:37.218 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.835 mm, average velocity = 2.153 mm/sec
17-03-17 20:59:37.778 -07 000000433 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.985358,
17-03-17 20:59:38.168 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:38.168 -07 000000626 INF: FPGA: Recv YRDPOS 132872
17-03-17 20:59:38.178 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.178 -07 000000576 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:38.198 -07 000000576 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:38.198 -07 000000576 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 20:59:38.198 -07 000000576 INF: Y Motor: Moved to 64.8789 after 1426 ms (table move)
17-03-17 20:59:38.198 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170941 mm (DAC = 37342)
17-03-17 20:59:38.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.208 -07 000000627 INF: FPGA: Recv ZSGSRD 35905
17-03-17 20:59:38.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 20:59:38.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.208 -07 000000576 INF: FPGA: Recv ZSGSRD 35897
17-03-17 20:59:38.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:38.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.218 -07 000000458 INF: FPGA: Recv ZSGSRD 35899
17-03-17 20:59:38.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.228 -07 000000576 INF: FPGA: Recv ZSGSRD 35902
17-03-17 20:59:38.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.238 -07 000000626 INF: FPGA: Recv ZSGSRD 35912
17-03-17 20:59:38.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.248 -07 000000576 INF: FPGA: Recv ZSGSRD 35906
17-03-17 20:59:38.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.258 -07 000000627 INF: FPGA: Recv ZSGSRD 35897
17-03-17 20:59:38.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.268 -07 000000433 INF: FPGA: Recv ZSGSRD 35895
17-03-17 20:59:38.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.278 -07 000000512 INF: FPGA: Recv ZSGSRD 35895
17-03-17 20:59:38.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.288 -07 000000433 INF: FPGA: Recv ZSGSRD 35902
17-03-17 20:59:38.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.298 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:38.298 -07 000000458 INF: FPGA: Recv ZPIEZORD 32033
17-03-17 20:59:38.308 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.308 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.698 V. Piezo Error = -8.5 V.
17-03-17 20:59:38.308 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.9 um, Read 10 ADC samples: Avg = 35901 (-170.1 uncal um), Error = 0.9 uncal um, Median = 35900 (-170.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35895 (-170.0 uncal um), Max = 35912 (-170.2 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:38.308 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35901, posNoise = 11, negNoise = 6
17-03-17 20:59:38.308 -07 000000610 INF: Z Motor: After move to -0.170941, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:38.308 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 103 ms (allowed 150 ms), total time = 1534 ms
17-03-17 20:59:38.308 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:38.358 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 20:59:38.358 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:38.358 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.170958992112495. ----------
17-03-17 20:59:38.358 -07 000000610 INF: Cycle	45	Tile	7	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:38.358 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37165, sync = True, waitForSettling = True)
17-03-17 20:59:38.358 -07 000000610 INF: Z Motor: Moving to -0.170130 mm, started at -0.170959 mm, distance = 0.83 um
17-03-17 20:59:38.358 -07 000000610 INF: FPGA: Xmit ZDACW 37165\n [Z Motor]
17-03-17 20:59:38.358 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 20:59:38.368 -07 000000610 INF: FPGA: 'ZDACW 37165' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:38.368 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:38.368 -07 000000569 INF: FPGA: Recv ZDACR 37165
17-03-17 20:59:38.378 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.378 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:38.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.528 -07 000000576 INF: FPGA: Recv ZSGSRD 35775
17-03-17 20:59:38.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:38.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.538 -07 000000569 INF: FPGA: Recv ZSGSRD 35773
17-03-17 20:59:38.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.548 -07 000000576 INF: FPGA: Recv ZSGSRD 35779
17-03-17 20:59:38.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.558 -07 000000569 INF: FPGA: Recv ZSGSRD 35774
17-03-17 20:59:38.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.568 -07 000000569 INF: FPGA: Recv ZSGSRD 35777
17-03-17 20:59:38.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.578 -07 000000576 INF: FPGA: Recv ZSGSRD 35771
17-03-17 20:59:38.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.588 -07 000000569 INF: FPGA: Recv ZSGSRD 35771
17-03-17 20:59:38.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.598 -07 000000576 INF: FPGA: Recv ZSGSRD 35776
17-03-17 20:59:38.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.608 -07 000000576 INF: FPGA: Recv ZSGSRD 35771
17-03-17 20:59:38.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:38.618 -07 000000458 INF: FPGA: Recv ZSGSRD 35776
17-03-17 20:59:38.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.628 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:38.628 -07 000000458 INF: FPGA: Recv ZPIEZORD 31813
17-03-17 20:59:38.638 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:38.638 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.671 V. Piezo Error = -8.7 V.
17-03-17 20:59:38.638 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35774 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35774 (-169.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35771 (-169.2 uncal um), Max = 35779 (-169.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 20:59:38.638 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35774, posNoise = 5, negNoise = 3
17-03-17 20:59:38.638 -07 000000610 INF: Z Motor: After move to -0.170130, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:38.638 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 20:59:38.638 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:38.638 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:38.638 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:38.638 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:38.638 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:38.638 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:38.638 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:38.638 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:38.638 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:38.638 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:38.638 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:38.638 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:38.648 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 20:59:38.648 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:38.648 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 20:59:38.648 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:38.658 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 20:59:38.658 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:38.658 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 20:59:38.658 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:38.658 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37342 150\n [Camera]
17-03-17 20:59:38.868 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-17 20:59:39.288 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:39.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:39.288 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:39.288 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:39.288 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 20:59:39.288 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:39.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:39.288 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:39.288 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:39.288 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 20:59:39.478 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37342 808
17-03-17 20:59:39.628 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:39.688 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 399 ms.
17-03-17 20:59:39.688 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 20:59:39.688 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:39.688 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 20:59:39.688 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 20:59:39.688 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:39.688 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 20:59:39.688 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-17 20:59:39.698 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:39.698 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-17 20:59:39.828 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:39.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:39.828 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:39.828 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:39.828 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 20:59:39.838 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:39.838 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:39.838 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:39.838 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:39.838 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 20:59:40.018 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:40.018 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:40.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37342 150' command took 2 ms to send, 1349 ms to get response, and 1360 ms overall
17-03-17 20:59:40.038 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 20:59:40.038 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.170143117170491. ------
17-03-17 20:59:40.048 -07 000000547 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17669 mm
17-03-17 20:59:40.048 -07 000000547 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:40.048 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:40.048 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:40.048 -07 000000433 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 20:59:40.048 -07 000000433 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-17 20:59:40.048 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 38599, sync = True, waitForSettling = False)
17-03-17 20:59:40.048 -07 000000512 INF: Z Motor: Moving to -0.176695 mm, started at -0.170143 mm, distance = -6.55 um
17-03-17 20:59:40.058 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:40.058 -07 000000433 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:40.058 -07 000000626 INF: FPGA: Recv YRDPOS 132872
17-03-17 20:59:40.068 -07 000000512 INF: FPGA: Xmit ZDACW 38599\n [Z Motor]
17-03-17 20:59:40.068 -07 000000433 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 20:59:40.068 -07 000000433 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:40.068 -07 000000433 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:40.068 -07 000000433 INF: Y Motor: Moving 1350 steps-28
17-03-17 20:59:40.078 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 20:59:40.088 -07 000000433 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:40.208 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 20:59:40.208 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 20:59:40.208 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:40.218 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:40.218 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 20:59:40.218 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 20:59:40.218 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:40.228 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:40.228 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 20:59:40.228 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 20:59:40.238 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 20:59:40.238 -07 000000512 INF: FPGA: 'ZDACW 38599' command took 0 ms to send, 161 ms to get response, and 182 ms overall
17-03-17 20:59:40.238 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:40.238 -07 000000576 INF: FPGA: Recv ZDACR 38599
17-03-17 20:59:40.248 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:40.248 -07 000000512 INF: Z Motor: MoveAbsStepped took 191 ms (did NOT wait for settling yet))
17-03-17 20:59:40.278 -07 000000576 INF: FPGA: Recv FOCMRRFOC
17-03-17 20:59:40.278 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-17 20:59:40.468 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 20:59:40.468 -07 000000433 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall
17-03-17 20:59:40.508 -07 000000433 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:40.508 -07 000000626 INF: FPGA: Recv YRDPOS 134583
17-03-17 20:59:40.518 -07 000000433 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:40.518 -07 000000433 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:40.518 -07 000000433 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 20:59:40.518 -07 000000433 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.844 mm, average velocity = 2.115 mm/sec
17-03-17 20:59:41.468 -07 000000433 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:41.468 -07 000000512 INF: FPGA: Recv YRDPOS 134583
17-03-17 20:59:41.478 -07 000000433 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:41.478 -07 000000433 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:41.498 -07 000000433 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:41.498 -07 000000433 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 20:59:41.498 -07 000000433 INF: Y Motor: Moved to 65.7144 after 1449 ms (table move)
17-03-17 20:59:41.508 -07 000000547 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176695 mm (DAC = 38599)
17-03-17 20:59:41.508 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.508 -07 000000576 INF: FPGA: Recv ZSGSRD 36805
17-03-17 20:59:41.518 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.518 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.518 -07 000000626 INF: FPGA: Recv ZSGSRD 36800
17-03-17 20:59:41.528 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.528 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.528 -07 000000576 INF: FPGA: Recv ZSGSRD 36792
17-03-17 20:59:41.538 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.538 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.538 -07 000000433 INF: FPGA: Recv ZSGSRD 36794
17-03-17 20:59:41.548 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.548 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.548 -07 000000576 INF: FPGA: Recv ZSGSRD 36791
17-03-17 20:59:41.558 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.558 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.558 -07 000000512 INF: FPGA: Recv ZSGSRD 36796
17-03-17 20:59:41.568 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:41.568 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.568 -07 000000569 INF: FPGA: Recv ZSGSRD 36784
17-03-17 20:59:41.578 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.578 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.578 -07 000000626 INF: FPGA: Recv ZSGSRD 36797
17-03-17 20:59:41.588 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.588 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.588 -07 000000626 INF: FPGA: Recv ZSGSRD 36804
17-03-17 20:59:41.598 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.598 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:41.598 -07 000000569 INF: FPGA: Recv ZSGSRD 36797
17-03-17 20:59:41.608 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.608 -07 000000547 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:41.608 -07 000000576 INF: FPGA: Recv ZPIEZORD 33154
17-03-17 20:59:41.618 -07 000000547 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:41.618 -07 000000547 INF: Z Motor: Piezo is near 50.8 V (nominally 0 to 100 V), expect near 58.9 V, since DAC is at 5.890 V. Piezo Error = -8.1 V.
17-03-17 20:59:41.618 -07 000000547 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.7 um, Read 10 ADC samples: Avg = 36796 (-175.8 uncal um), Error = 0.9 uncal um, Median = 36796 (-175.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 36784 (-175.7 uncal um), Max = 36805 (-175.9 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 12 (0.1 uncal um)
17-03-17 20:59:41.618 -07 000000547 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36796, posNoise = 9, negNoise = 12
17-03-17 20:59:41.618 -07 000000547 INF: Z Motor: After move to -0.176695, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:41.618 -07 000000547 INF: Z Motor: Settle wait time = 1451 ms, measure time = 111 ms (allowed 150 ms), total time = 1562 ms
17-03-17 20:59:41.618 -07 000000547 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:41.658 -07 000000547 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-17 20:59:41.658 -07 000000547 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:41.658 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:41.658 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:41.658 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:41.658 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 20:59:41.658 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:41.658 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:41.658 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:41.658 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 20:59:41.668 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 20:59:41.668 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 20:59:41.678 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 20:59:41.678 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 20:59:41.678 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 20:59:41.728 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 20:59:41.838 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:41.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:41.918 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 20:59:41.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 20:59:41.928 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 20:59:42.048 -07 000000569 INF: FPGA: Recv @CAMSNAP 282
17-03-17 20:59:42.048 -07 000000569 INF: FPGA: Recv CAMSNAP
17-03-17 20:59:42.048 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424986384, 0x0, 559484976) start.
17-03-17 20:59:42.048 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 361 ms to get response, and 366 ms overall
17-03-17 20:59:42.168 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424986384, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 20:59:42.168 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:42.168 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 20:59:42.168 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 249 ms.
17-03-17 20:59:42.248 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:42.248 -07 000000547 INF: Autofocus start
17-03-17 20:59:42.248 -07 000000547 INF: MeasureProfile start
17-03-17 20:59:42.248 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:42.258 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:42.258 -07 000000626 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 20:59:42.258 -07 000000547 INF: MeasureProfile done
17-03-17 20:59:42.258 -07 000000547 INF: X=32  Z correction [um]=0.09220707
17-03-17 20:59:42.258 -07 000000547 INF: Autofocus finished
17-03-17 20:59:42.458 -07 000000547 INF: FPGA: Recv FOCMRRIMG
17-03-17 20:59:42.458 -07 000000626 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 20:59:42.458 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.176708661979371. ----------
17-03-17 20:59:42.468 -07 000000610 INF: Cycle	45	Tile	8	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:42.468 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37131, sync = True, waitForSettling = True)
17-03-17 20:59:42.468 -07 000000610 INF: Z Motor: Moving to -0.169975 mm, started at -0.176709 mm, distance = 6.73 um
17-03-17 20:59:42.468 -07 000000610 INF: FPGA: Xmit ZDACW 37131\n [Z Motor]
17-03-17 20:59:42.468 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 20:59:42.478 -07 000000610 INF: FPGA: 'ZDACW 37131' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 20:59:42.478 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:42.478 -07 000000576 INF: FPGA: Recv ZDACR 37131
17-03-17 20:59:42.488 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.488 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:42.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.638 -07 000000433 INF: FPGA: Recv ZSGSRD 35752
17-03-17 20:59:42.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:42.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.648 -07 000000569 INF: FPGA: Recv ZSGSRD 35751
17-03-17 20:59:42.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.658 -07 000000547 INF: FPGA: Recv ZSGSRD 35751
17-03-17 20:59:42.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.668 -07 000000512 INF: FPGA: Recv ZSGSRD 35746
17-03-17 20:59:42.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.678 -07 000000547 INF: FPGA: Recv ZSGSRD 35743
17-03-17 20:59:42.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.688 -07 000000512 INF: FPGA: Recv ZSGSRD 35754
17-03-17 20:59:42.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.698 -07 000000547 INF: FPGA: Recv ZSGSRD 35749
17-03-17 20:59:42.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.708 -07 000000569 INF: FPGA: Recv ZSGSRD 35750
17-03-17 20:59:42.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.718 -07 000000547 INF: FPGA: Recv ZSGSRD 35750
17-03-17 20:59:42.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:42.728 -07 000000576 INF: FPGA: Recv ZSGSRD 35749
17-03-17 20:59:42.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.738 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:42.738 -07 000000547 INF: FPGA: Recv ZPIEZORD 31763
17-03-17 20:59:42.748 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:42.748 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.666 V. Piezo Error = -8.8 V.
17-03-17 20:59:42.748 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35750 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35750 (-169.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35743 (-169.1 uncal um), Max = 35754 (-169.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 20:59:42.748 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35750, posNoise = 4, negNoise = 7
17-03-17 20:59:42.748 -07 000000610 INF: Z Motor: After move to -0.169975, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:42.748 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 20:59:42.748 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:42.748 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:42.748 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:42.748 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:42.748 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:42.748 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:42.748 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:42.748 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:42.748 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:42.748 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:42.748 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:42.748 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:42.758 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 20:59:42.758 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:42.758 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 20:59:42.758 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:42.768 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 20:59:42.768 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 20:59:42.768 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 20:59:42.768 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 20:59:42.768 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37308 150\n [Camera]
17-03-17 20:59:42.968 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:43.158 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.012614,
17-03-17 20:59:43.388 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:43.388 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:43.388 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:43.388 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:43.388 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:43.398 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:43.398 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:43.398 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 20:59:43.398 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:43.398 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 20:59:43.578 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37308 808
17-03-17 20:59:43.728 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:43.778 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 20:59:43.778 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:43.778 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:43.778 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 20:59:43.778 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 20:59:43.778 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:43.778 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 20:59:43.778 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 20:59:43.788 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:43.788 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 20:59:43.938 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:43.938 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:43.938 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:43.938 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:43.938 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 20:59:43.938 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:43.938 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:43.938 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:44.048 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:44.048 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-17 20:59:44.128 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:44.128 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:44.128 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37308 150' command took 2 ms to send, 1354 ms to get response, and 1360 ms overall
17-03-17 20:59:44.128 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.170335
17-03-17 20:59:44.128 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17033 mm
17-03-17 20:59:44.128 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:44.128 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 20:59:44.128 -07 000000502 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-17 20:59:44.128 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:44.138 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 37210, sync = True, waitForSettling = False)
17-03-17 20:59:44.138 -07 000000431 INF: Z Motor: Moving to -0.170336 mm, started at -0.169989 mm, distance = -0.35 um
17-03-17 20:59:44.138 -07 000000431 INF: FPGA: Xmit ZDACW 37210\n [Z Motor]
17-03-17 20:59:44.138 -07 000000547 INF: FPGA: Recv YRDPOS 134583
17-03-17 20:59:44.138 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 20:59:44.138 -07 000000502 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:44.138 -07 000000502 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:44.138 -07 000000502 INF: Y Motor: Moving 1341 steps-17
17-03-17 20:59:44.138 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 20:59:44.148 -07 000000431 INF: FPGA: 'ZDACW 37210' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:44.148 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:44.148 -07 000000576 INF: FPGA: Recv ZDACR 37210
17-03-17 20:59:44.158 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:44.158 -07 000000431 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-17 20:59:44.158 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:44.318 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 20:59:44.318 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:44.318 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:44.328 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 20:59:44.328 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 20:59:44.428 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 20:59:44.428 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 20:59:44.428 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:44.428 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 20:59:44.438 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 494 ms.
17-03-17 20:59:44.528 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 20:59:44.528 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall
17-03-17 20:59:44.578 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:44.578 -07 000000433 INF: FPGA: Recv YRDPOS 136272
17-03-17 20:59:44.588 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:44.588 -07 000000502 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:44.588 -07 000000502 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 20:59:44.588 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.838 mm, average velocity = 2.117 mm/sec
17-03-17 20:59:45.538 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:45.538 -07 000000626 INF: FPGA: Recv YRDPOS 136273
17-03-17 20:59:45.548 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:45.548 -07 000000502 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:45.568 -07 000000502 INF: Y Motor: After move to 66.552605, error = -0.013054, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:45.568 -07 000000502 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 20:59:45.568 -07 000000502 INF: Y Motor: Moved to 66.5396 after 1434 ms (table move)
17-03-17 20:59:45.568 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170336 mm (DAC = 37210)
17-03-17 20:59:45.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.568 -07 000000569 INF: FPGA: Recv ZSGSRD 35807
17-03-17 20:59:45.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:45.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.578 -07 000000626 INF: FPGA: Recv ZSGSRD 35806
17-03-17 20:59:45.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.588 -07 000000512 INF: FPGA: Recv ZSGSRD 35812
17-03-17 20:59:45.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.598 -07 000000502 INF: FPGA: Recv ZSGSRD 35811
17-03-17 20:59:45.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.608 -07 000000569 INF: FPGA: Recv ZSGSRD 35803
17-03-17 20:59:45.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.618 -07 000000626 INF: FPGA: Recv ZSGSRD 35800
17-03-17 20:59:45.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.628 -07 000000512 INF: FPGA: Recv ZSGSRD 35804
17-03-17 20:59:45.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.638 -07 000000433 INF: FPGA: Recv ZSGSRD 35806
17-03-17 20:59:45.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.648 -07 000000502 INF: FPGA: Recv ZSGSRD 35803
17-03-17 20:59:45.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:45.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.658 -07 000000626 INF: FPGA: Recv ZSGSRD 35808
17-03-17 20:59:45.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.668 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:45.668 -07 000000547 INF: FPGA: Recv ZPIEZORD 31897
17-03-17 20:59:45.678 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.678 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.678 V. Piezo Error = -8.6 V.
17-03-17 20:59:45.678 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35806 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35806 (-169.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35800 (-169.4 uncal um), Max = 35812 (-169.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:45.678 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35806, posNoise = 6, negNoise = 6
17-03-17 20:59:45.678 -07 000000610 INF: Z Motor: After move to -0.170336, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:45.678 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 104 ms (allowed 150 ms), total time = 1539 ms
17-03-17 20:59:45.678 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:45.728 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-17 20:59:45.728 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:45.728 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53955078125, Z-position -0.170348691959028. ----------
17-03-17 20:59:45.728 -07 000000610 INF: Cycle	45	Tile	9	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:45.728 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37033, sync = True, waitForSettling = True)
17-03-17 20:59:45.728 -07 000000610 INF: Z Motor: Moving to -0.169526 mm, started at -0.170349 mm, distance = 0.82 um
17-03-17 20:59:45.728 -07 000000610 INF: FPGA: Xmit ZDACW 37033\n [Z Motor]
17-03-17 20:59:45.728 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 20:59:45.738 -07 000000610 INF: FPGA: 'ZDACW 37033' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:45.738 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:45.738 -07 000000576 INF: FPGA: Recv ZDACR 37033
17-03-17 20:59:45.748 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.748 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:45.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.898 -07 000000547 INF: FPGA: Recv ZSGSRD 35676
17-03-17 20:59:45.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.908 -07 000000576 INF: FPGA: Recv ZSGSRD 35683
17-03-17 20:59:45.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.918 -07 000000431 INF: FPGA: Recv ZSGSRD 35685
17-03-17 20:59:45.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.928 -07 000000547 INF: FPGA: Recv ZSGSRD 35678
17-03-17 20:59:45.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.938 -07 000000626 INF: FPGA: Recv ZSGSRD 35679
17-03-17 20:59:45.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.948 -07 000000433 INF: FPGA: Recv ZSGSRD 35682
17-03-17 20:59:45.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.958 -07 000000502 INF: FPGA: Recv ZSGSRD 35675
17-03-17 20:59:45.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.968 -07 000000431 INF: FPGA: Recv ZSGSRD 35682
17-03-17 20:59:45.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.978 -07 000000502 INF: FPGA: Recv ZSGSRD 35673
17-03-17 20:59:45.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:45.988 -07 000000626 INF: FPGA: Recv ZSGSRD 35678
17-03-17 20:59:45.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:45.998 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:45.998 -07 000000576 INF: FPGA: Recv ZPIEZORD 31715
17-03-17 20:59:46.008 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:46.008 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.651 V. Piezo Error = -8.8 V.
17-03-17 20:59:46.008 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35679 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35678 (-168.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35673 (-168.6 uncal um), Max = 35685 (-168.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:46.008 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35679, posNoise = 6, negNoise = 6
17-03-17 20:59:46.008 -07 000000610 INF: Z Motor: After move to -0.169526, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:46.008 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 20:59:46.008 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:46.008 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:46.008 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:46.008 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:46.008 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:46.008 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:46.008 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:46.008 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:46.008 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:46.008 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:46.008 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:46.008 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:46.018 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 20:59:46.018 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:46.018 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:46.018 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:46.018 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 20:59:46.018 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 20:59:46.028 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 20:59:46.028 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 20:59:46.028 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37210 150\n [Camera]
17-03-17 20:59:46.228 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:46.648 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:46.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:46.648 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:46.648 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:46.648 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:46.658 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:46.658 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:46.658 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 20:59:46.658 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:46.658 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 20:59:46.838 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:46.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:46.848 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37210 808
17-03-17 20:59:46.988 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:47.028 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 20:59:47.028 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 20:59:47.028 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:47.038 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 20:59:47.038 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 20:59:47.038 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:47.038 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:47.038 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:47.038 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 20:59:47.048 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 20:59:47.198 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:47.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:47.198 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:47.198 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:47.198 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 20:59:47.198 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:47.198 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:47.198 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:47.198 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:47.198 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 20:59:47.388 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 20:59:47.388 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:47.388 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37210 150' command took 2 ms to send, 1353 ms to get response, and 1360 ms overall
17-03-17 20:59:47.388 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170382
17-03-17 20:59:47.388 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17038 mm
17-03-17 20:59:47.388 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:47.398 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 20:59:47.398 -07 000000576 INF: Y Motor: Moving to 67.3826 mm, started at 66.5396 mm, delta = 0.8431 mm
17-03-17 20:59:47.398 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:47.398 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37220, sync = True, waitForSettling = False)
17-03-17 20:59:47.398 -07 000000502 INF: Z Motor: Moving to -0.170382 mm, started at -0.169533 mm, distance = -0.85 um
17-03-17 20:59:47.398 -07 000000626 INF: FPGA: Recv YRDPOS 136273
17-03-17 20:59:47.408 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:47.408 -07 000000576 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:47.408 -07 000000576 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:47.408 -07 000000576 INF: Y Motor: Moving 1349 steps-28
17-03-17 20:59:47.408 -07 000000502 INF: FPGA: Xmit ZDACW 37220\n [Z Motor]
17-03-17 20:59:47.408 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 20:59:47.418 -07 000000502 INF: FPGA: 'ZDACW 37220' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 20:59:47.418 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:47.418 -07 000000512 INF: FPGA: Recv ZDACR 37220
17-03-17 20:59:47.428 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:47.428 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:47.428 -07 000000502 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 20:59:47.578 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 20:59:47.578 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 20:59:47.578 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:47.578 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 20:59:47.578 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 20:59:47.578 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:47.588 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:47.588 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 20:59:47.588 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:47.588 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 20:59:47.798 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-17 20:59:47.798 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 20:59:47.838 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:47.848 -07 000000502 INF: FPGA: Recv YRDPOS 137978
17-03-17 20:59:47.848 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 5 ms overall
17-03-17 20:59:47.848 -07 000000576 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:47.848 -07 000000576 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-17 20:59:47.848 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.124 mm/sec
17-03-17 20:59:48.518 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.004458,
17-03-17 20:59:48.798 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:48.798 -07 000000512 INF: FPGA: Recv YRDPOS 137979
17-03-17 20:59:48.808 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:48.808 -07 000000576 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:48.828 -07 000000576 INF: Y Motor: After move to 67.382607, error = -0.010048, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:48.828 -07 000000576 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 20:59:48.828 -07 000000576 INF: Y Motor: Moved to 67.3726 after 1433 ms (table move)
17-03-17 20:59:48.828 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170382 mm (DAC = 37220)
17-03-17 20:59:48.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.848 -07 000000512 INF: FPGA: Recv ZSGSRD 35814
17-03-17 20:59:48.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 20:59:48.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.858 -07 000000502 INF: FPGA: Recv ZSGSRD 35816
17-03-17 20:59:48.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.878 -07 000000512 INF: FPGA: Recv ZSGSRD 35818
17-03-17 20:59:48.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:48.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.888 -07 000000012 INF: FPGA: Recv ZSGSRD 35811
17-03-17 20:59:48.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.918 -07 000000626 INF: FPGA: Recv ZSGSRD 35808
17-03-17 20:59:48.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 20:59:48.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.928 -07 000000012 INF: FPGA: Recv ZSGSRD 35813
17-03-17 20:59:48.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.938 -07 000000431 INF: FPGA: Recv ZSGSRD 35818
17-03-17 20:59:48.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.948 -07 000000502 INF: FPGA: Recv ZSGSRD 35819
17-03-17 20:59:48.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.958 -07 000000626 INF: FPGA: Recv ZSGSRD 35813
17-03-17 20:59:48.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:48.968 -07 000000512 INF: FPGA: Recv ZSGSRD 35812
17-03-17 20:59:48.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.978 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:48.978 -07 000000433 INF: FPGA: Recv ZPIEZORD 31899
17-03-17 20:59:48.988 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.679 V. Piezo Error = -8.6 V.
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35814 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35814 (-169.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35808 (-169.5 uncal um), Max = 35819 (-169.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35814, posNoise = 5, negNoise = 6
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: After move to -0.170382, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 154 ms (allowed 150 ms), total time = 1589 ms
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 154 ms, longer than max expected time of 150 ms
17-03-17 20:59:48.988 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-17 20:59:48.988 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:48.988 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37255859375, Z-position -0.170400085656162. ----------
17-03-17 20:59:48.988 -07 000000610 INF: Cycle	45	Tile	10	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37043, sync = True, waitForSettling = True)
17-03-17 20:59:48.988 -07 000000610 INF: Z Motor: Moving to -0.169572 mm, started at -0.170400 mm, distance = 0.83 um
17-03-17 20:59:48.988 -07 000000610 INF: FPGA: Xmit ZDACW 37043\n [Z Motor]
17-03-17 20:59:48.998 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 20:59:48.998 -07 000000610 INF: FPGA: 'ZDACW 37043' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 20:59:48.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:48.998 -07 000000512 INF: FPGA: Recv ZDACR 37043
17-03-17 20:59:49.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:49.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.158 -07 000000431 INF: FPGA: Recv ZSGSRD 35684
17-03-17 20:59:49.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:49.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.168 -07 000000626 INF: FPGA: Recv ZSGSRD 35689
17-03-17 20:59:49.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.178 -07 000000431 INF: FPGA: Recv ZSGSRD 35685
17-03-17 20:59:49.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.188 -07 000000576 INF: FPGA: Recv ZSGSRD 35687
17-03-17 20:59:49.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.198 -07 000000012 INF: FPGA: Recv ZSGSRD 35689
17-03-17 20:59:49.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.208 -07 000000502 INF: FPGA: Recv ZSGSRD 35688
17-03-17 20:59:49.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.218 -07 000000433 INF: FPGA: Recv ZSGSRD 35680
17-03-17 20:59:49.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.228 -07 000000576 INF: FPGA: Recv ZSGSRD 35685
17-03-17 20:59:49.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.238 -07 000000431 INF: FPGA: Recv ZSGSRD 35684
17-03-17 20:59:49.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 20:59:49.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:49.248 -07 000000502 INF: FPGA: Recv ZSGSRD 35693
17-03-17 20:59:49.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:49.258 -07 000000431 INF: FPGA: Recv ZPIEZORD 31714
17-03-17 20:59:49.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:49.268 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.652 V. Piezo Error = -8.8 V.
17-03-17 20:59:49.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35686 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35686 (-168.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35680 (-168.7 uncal um), Max = 35693 (-168.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:49.268 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35686, posNoise = 7, negNoise = 6
17-03-17 20:59:49.268 -07 000000610 INF: Z Motor: After move to -0.169572, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:49.268 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 20:59:49.268 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:49.268 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:49.268 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:49.268 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:49.268 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:49.268 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:49.268 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:49.268 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:49.268 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:49.268 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:49.268 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:49.268 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:49.278 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 20:59:49.278 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:49.278 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:49.278 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:49.288 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 20:59:49.288 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 20:59:49.288 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 20:59:49.288 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 20:59:49.288 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37220 150\n [Camera]
17-03-17 20:59:49.488 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:49.918 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:49.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:49.918 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:49.918 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:49.918 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 20:59:49.918 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:49.918 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:49.918 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:49.918 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:49.918 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 20:59:50.108 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37220 808
17-03-17 20:59:50.258 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:50.298 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 20:59:50.298 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 20:59:50.298 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:50.298 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 20:59:50.298 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 20:59:50.298 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:50.298 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:50.298 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:50.298 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:50.308 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 20:59:50.458 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:50.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:50.458 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:50.458 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:50.458 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 20:59:50.468 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:50.468 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:50.468 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:50.468 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:50.468 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 20:59:50.648 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 20:59:50.658 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:50.658 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37220 150' command took 2 ms to send, 1350 ms to get response, and 1360 ms overall
17-03-17 20:59:50.658 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169963
17-03-17 20:59:50.658 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16996 mm
17-03-17 20:59:50.658 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:50.658 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 20:59:50.658 -07 000000618 INF: Y Motor: Moving to 68.2126 mm, started at 67.3726 mm, delta = 0.8400 mm
17-03-17 20:59:50.658 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:50.658 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37128, sync = True, waitForSettling = False)
17-03-17 20:59:50.658 -07 000000512 INF: Z Motor: Moving to -0.169961 mm, started at -0.169578 mm, distance = -0.38 um
17-03-17 20:59:50.658 -07 000000458 INF: FPGA: Recv YRDPOS 137979
17-03-17 20:59:50.668 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:50.668 -07 000000512 INF: FPGA: Xmit ZDACW 37128\n [Z Motor]
17-03-17 20:59:50.668 -07 000000618 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:50.668 -07 000000618 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:50.668 -07 000000618 INF: Y Motor: Moving 1344 steps-22
17-03-17 20:59:50.668 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 20:59:50.678 -07 000000512 INF: FPGA: 'ZDACW 37128' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 20:59:50.678 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:50.678 -07 000000569 INF: FPGA: Recv ZDACR 37128
17-03-17 20:59:50.688 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:50.688 -07 000000512 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 20:59:50.688 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:50.848 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 20:59:50.848 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 20:59:50.848 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:50.848 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 20:59:50.848 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 20:59:50.848 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:50.848 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:50.858 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 20:59:50.858 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:50.858 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 20:59:51.058 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-17 20:59:51.058 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 20:59:51.098 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:51.098 -07 000000502 INF: FPGA: Recv YRDPOS 139684
17-03-17 20:59:51.108 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:51.108 -07 000000618 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:51.108 -07 000000618 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 20:59:51.108 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-17 20:59:51.838 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:51.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:52.058 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:52.058 -07 000000626 INF: FPGA: Recv YRDPOS 139684
17-03-17 20:59:52.068 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:52.068 -07 000000618 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:52.088 -07 000000618 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:52.088 -07 000000618 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 20:59:52.088 -07 000000618 INF: Y Motor: Moved to 68.2051 after 1425 ms (table move)
17-03-17 20:59:52.088 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169961 mm (DAC = 37128)
17-03-17 20:59:52.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.088 -07 000000512 INF: FPGA: Recv ZSGSRD 35747
17-03-17 20:59:52.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:52.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.098 -07 000000502 INF: FPGA: Recv ZSGSRD 35739
17-03-17 20:59:52.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:52.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.108 -07 000000438 INF: FPGA: Recv ZSGSRD 35751
17-03-17 20:59:52.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.118 -07 000000569 INF: FPGA: Recv ZSGSRD 35750
17-03-17 20:59:52.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.128 -07 000000438 INF: FPGA: Recv ZSGSRD 35754
17-03-17 20:59:52.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.138 -07 000000626 INF: FPGA: Recv ZSGSRD 35749
17-03-17 20:59:52.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.148 -07 000000627 INF: FPGA: Recv ZSGSRD 35747
17-03-17 20:59:52.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.158 -07 000000626 INF: FPGA: Recv ZSGSRD 35746
17-03-17 20:59:52.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.168 -07 000000512 INF: FPGA: Recv ZSGSRD 35735
17-03-17 20:59:52.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.178 -07 000000626 INF: FPGA: Recv ZSGSRD 35746
17-03-17 20:59:52.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.188 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:52.188 -07 000000502 INF: FPGA: Recv ZPIEZORD 31820
17-03-17 20:59:52.198 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.198 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.665 V. Piezo Error = -8.7 V.
17-03-17 20:59:52.198 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35746 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35747 (-169.1 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 35735 (-169.0 uncal um), Max = 35754 (-169.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 20:59:52.198 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35746, posNoise = 8, negNoise = 11
17-03-17 20:59:52.198 -07 000000610 INF: Z Motor: After move to -0.169961, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:52.198 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 108 ms (allowed 150 ms), total time = 1534 ms
17-03-17 20:59:52.198 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:52.248 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-17 20:59:52.248 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:52.248 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.169963239230522. ----------
17-03-17 20:59:52.248 -07 000000610 INF: Cycle	45	Tile	11	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:52.248 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36952, sync = True, waitForSettling = True)
17-03-17 20:59:52.248 -07 000000610 INF: Z Motor: Moving to -0.169155 mm, started at -0.169963 mm, distance = 0.81 um
17-03-17 20:59:52.248 -07 000000610 INF: FPGA: Xmit ZDACW 36952\n [Z Motor]
17-03-17 20:59:52.248 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 20:59:52.258 -07 000000610 INF: FPGA: 'ZDACW 36952' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 20:59:52.258 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:52.258 -07 000000438 INF: FPGA: Recv ZDACR 36952
17-03-17 20:59:52.268 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.268 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:52.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.418 -07 000000569 INF: FPGA: Recv ZSGSRD 35625
17-03-17 20:59:52.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.428 -07 000000627 INF: FPGA: Recv ZSGSRD 35624
17-03-17 20:59:52.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.438 -07 000000502 INF: FPGA: Recv ZSGSRD 35623
17-03-17 20:59:52.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.448 -07 000000626 INF: FPGA: Recv ZSGSRD 35620
17-03-17 20:59:52.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.458 -07 000000502 INF: FPGA: Recv ZSGSRD 35627
17-03-17 20:59:52.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.468 -07 000000569 INF: FPGA: Recv ZSGSRD 35615
17-03-17 20:59:52.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.478 -07 000000502 INF: FPGA: Recv ZSGSRD 35617
17-03-17 20:59:52.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.488 -07 000000626 INF: FPGA: Recv ZSGSRD 35620
17-03-17 20:59:52.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.498 -07 000000502 INF: FPGA: Recv ZSGSRD 35622
17-03-17 20:59:52.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:52.508 -07 000000569 INF: FPGA: Recv ZSGSRD 35623
17-03-17 20:59:52.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:52.518 -07 000000502 INF: FPGA: Recv ZPIEZORD 31636
17-03-17 20:59:52.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:52.528 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.639 V. Piezo Error = -8.8 V.
17-03-17 20:59:52.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35622 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35622 (-168.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35615 (-168.2 uncal um), Max = 35627 (-168.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 20:59:52.528 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35622, posNoise = 5, negNoise = 7
17-03-17 20:59:52.528 -07 000000610 INF: Z Motor: After move to -0.169155, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:52.528 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 20:59:52.528 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:52.528 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:52.528 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:52.528 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:52.528 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:52.528 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:52.528 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:52.528 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:52.528 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:52.528 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:52.528 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:52.528 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:52.528 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 20:59:52.538 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 20:59:52.538 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:52.538 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:52.548 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 20:59:52.548 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 20:59:52.548 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 20:59:52.548 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 20:59:52.548 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37128 150\n [Camera]
17-03-17 20:59:52.748 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:53.178 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:53.178 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:53.178 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:53.178 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:53.178 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 20:59:53.178 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:53.178 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:53.178 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:53.178 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:53.178 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 20:59:53.368 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37128 809
17-03-17 20:59:53.518 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:53.548 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 20:59:53.548 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 20:59:53.548 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:53.558 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 20:59:53.558 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 20:59:53.558 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:53.558 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:53.558 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:53.558 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:53.568 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 20:59:53.718 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:53.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:53.718 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:53.718 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:53.718 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 20:59:53.728 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:53.728 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:53.728 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:53.728 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:53.728 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 20:59:53.888 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.005817,
17-03-17 20:59:53.908 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:53.918 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:53.918 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37128 150' command took 2 ms to send, 1350 ms to get response, and 1360 ms overall
17-03-17 20:59:53.918 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 20:59:53.918 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.205078125, Z-Position -0.169166636924944. ------
17-03-17 20:59:53.918 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17580 mm
17-03-17 20:59:53.918 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:53.918 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 20:59:53.918 -07 000000618 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-17 20:59:53.918 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 38405, sync = True, waitForSettling = False)
17-03-17 20:59:53.918 -07 000000502 INF: Z Motor: Moving to -0.175807 mm, started at -0.169167 mm, distance = -6.64 um
17-03-17 20:59:53.928 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:53.928 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:53.938 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 20:59:53.948 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:53.948 -07 000000480 INF: FPGA: Recv YRDPOS 139684
17-03-17 20:59:53.958 -07 000000502 INF: FPGA: Xmit ZDACW 38405\n [Z Motor]
17-03-17 20:59:53.958 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 31 ms overall
17-03-17 20:59:53.958 -07 000000618 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:53.958 -07 000000618 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:53.958 -07 000000618 INF: Y Motor: Moving 1340 steps-15
17-03-17 20:59:53.958 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 20:59:53.968 -07 000000502 INF: FPGA: 'ZDACW 38405' command took 0 ms to send, 0 ms to get response, and 40 ms overall
17-03-17 20:59:53.968 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 20:59:53.978 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:53.988 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:53.988 -07 000000458 INF: FPGA: Recv ZDACR 38405
17-03-17 20:59:53.998 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 20:59:53.998 -07 000000502 INF: Z Motor: MoveAbsStepped took 71 ms (did NOT wait for settling yet))
17-03-17 20:59:54.108 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 20:59:54.108 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 20:59:54.108 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:54.108 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 20:59:54.108 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 20:59:54.108 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:54.108 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:54.108 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 20:59:54.118 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 20:59:54.118 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 20:59:54.168 -07 000000512 INF: FPGA: Recv FOCMRRFOC
17-03-17 20:59:54.168 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 233 ms overall
17-03-17 20:59:54.348 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 20:59:54.348 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 20:59:54.388 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:54.398 -07 000000012 INF: FPGA: Recv YRDPOS 141368
17-03-17 20:59:54.398 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:54.398 -07 000000618 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:54.398 -07 000000618 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 20:59:54.398 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec
17-03-17 20:59:55.348 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:55.348 -07 000000512 INF: FPGA: Recv YRDPOS 141369
17-03-17 20:59:55.358 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:55.358 -07 000000618 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:55.378 -07 000000618 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:55.378 -07 000000618 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 20:59:55.378 -07 000000618 INF: Y Motor: Moved to 69.0278 after 1456 ms (table move)
17-03-17 20:59:55.378 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175807 mm (DAC = 38405)
17-03-17 20:59:55.378 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.388 -07 000000012 INF: FPGA: Recv ZSGSRD 36661
17-03-17 20:59:55.388 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 20:59:55.388 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.388 -07 000000476 INF: FPGA: Recv ZSGSRD 36656
17-03-17 20:59:55.398 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:55.398 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.398 -07 000000502 INF: FPGA: Recv ZSGSRD 36658
17-03-17 20:59:55.408 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.408 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.408 -07 000000012 INF: FPGA: Recv ZSGSRD 36658
17-03-17 20:59:55.418 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.418 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.418 -07 000000480 INF: FPGA: Recv ZSGSRD 36661
17-03-17 20:59:55.428 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.428 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.428 -07 000000502 INF: FPGA: Recv ZSGSRD 36655
17-03-17 20:59:55.438 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.438 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.438 -07 000000476 INF: FPGA: Recv ZSGSRD 36656
17-03-17 20:59:55.448 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.448 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.448 -07 000000458 INF: FPGA: Recv ZSGSRD 36650
17-03-17 20:59:55.458 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.458 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.458 -07 000000480 INF: FPGA: Recv ZSGSRD 36657
17-03-17 20:59:55.468 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.468 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:55.468 -07 000000012 INF: FPGA: Recv ZSGSRD 36651
17-03-17 20:59:55.478 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.478 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:55.478 -07 000000618 INF: FPGA: Recv ZPIEZORD 33012
17-03-17 20:59:55.488 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:55.488 -07 000000626 INF: Z Motor: Piezo is near 50.5 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.860 V. Piezo Error = -8.1 V.
17-03-17 20:59:55.488 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.8 um, Read 10 ADC samples: Avg = 36656 (-174.9 uncal um), Error = 0.9 uncal um, Median = 36656 (-174.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36650 (-174.9 uncal um), Max = 36661 (-175.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:55.488 -07 000000626 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36656, posNoise = 5, negNoise = 6
17-03-17 20:59:55.488 -07 000000626 INF: Z Motor: After move to -0.175807, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:55.488 -07 000000626 INF: Z Motor: Settle wait time = 1458 ms, measure time = 103 ms (allowed 150 ms), total time = 1561 ms
17-03-17 20:59:55.488 -07 000000626 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:55.538 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms
17-03-17 20:59:55.538 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:55.538 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:55.538 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:55.538 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:55.538 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:55.538 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 20:59:55.538 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:55.538 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:55.538 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 20:59:55.548 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 20:59:55.548 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 20:59:55.558 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 20:59:55.558 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 20:59:55.558 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 20:59:55.608 -07 000000433 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 20:59:55.808 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 20:59:55.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 20:59:55.808 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 20:59:55.808 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424986384, 0x0, 559484976) start.
17-03-17 20:59:55.848 -07 000000618 INF: FPGA: Recv @CAMSNAP 283
17-03-17 20:59:55.848 -07 000000438 INF: FPGA: Recv CAMSNAP
17-03-17 20:59:55.848 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 284 ms to get response, and 287 ms overall
17-03-17 20:59:55.938 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424986384, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 20:59:55.938 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:55.938 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 20:59:55.938 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 131 ms.
17-03-17 20:59:55.948 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 20:59:55.948 -07 000000458 INF: Autofocus start
17-03-17 20:59:55.948 -07 000000458 INF: MeasureProfile start
17-03-17 20:59:55.948 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-17 20:59:55.958 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 20:59:55.958 -07 000000480 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 20:59:55.958 -07 000000458 INF: MeasureProfile done
17-03-17 20:59:55.958 -07 000000458 INF: X=0  Z correction [um]=-0.0713522
17-03-17 20:59:55.958 -07 000000458 INF: Autofocus finished
17-03-17 20:59:56.158 -07 000000547 INF: FPGA: Recv FOCMRRIMG
17-03-17 20:59:56.158 -07 000000480 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 20:59:56.158 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.175809272279525. ----------
17-03-17 20:59:56.158 -07 000000610 INF: Cycle	45	Tile	12	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:56.168 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36902, sync = True, waitForSettling = True)
17-03-17 20:59:56.168 -07 000000610 INF: Z Motor: Moving to -0.168927 mm, started at -0.175809 mm, distance = 6.88 um
17-03-17 20:59:56.168 -07 000000610 INF: FPGA: Xmit ZDACW 36902\n [Z Motor]
17-03-17 20:59:56.168 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 20:59:56.178 -07 000000610 INF: FPGA: 'ZDACW 36902' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 20:59:56.178 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:56.178 -07 000000569 INF: FPGA: Recv ZDACR 36902
17-03-17 20:59:56.188 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.188 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:56.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.338 -07 000000480 INF: FPGA: Recv ZSGSRD 35587
17-03-17 20:59:56.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:56.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.348 -07 000000569 INF: FPGA: Recv ZSGSRD 35591
17-03-17 20:59:56.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.358 -07 000000431 INF: FPGA: Recv ZSGSRD 35582
17-03-17 20:59:56.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.368 -07 000000012 INF: FPGA: Recv ZSGSRD 35586
17-03-17 20:59:56.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.378 -07 000000626 INF: FPGA: Recv ZSGSRD 35589
17-03-17 20:59:56.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.388 -07 000000618 INF: FPGA: Recv ZSGSRD 35586
17-03-17 20:59:56.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.398 -07 000000480 INF: FPGA: Recv ZSGSRD 35586
17-03-17 20:59:56.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.408 -07 000000626 INF: FPGA: Recv ZSGSRD 35582
17-03-17 20:59:56.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.418 -07 000000512 INF: FPGA: Recv ZSGSRD 35593
17-03-17 20:59:56.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:56.428 -07 000000626 INF: FPGA: Recv ZSGSRD 35590
17-03-17 20:59:56.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.438 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:56.438 -07 000000431 INF: FPGA: Recv ZPIEZORD 31577
17-03-17 20:59:56.448 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:56.448 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.631 V. Piezo Error = -8.9 V.
17-03-17 20:59:56.448 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35587 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35586 (-168.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35582 (-168.0 uncal um), Max = 35593 (-168.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 20:59:56.448 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35587, posNoise = 6, negNoise = 5
17-03-17 20:59:56.448 -07 000000610 INF: Z Motor: After move to -0.168927, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:56.448 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 20:59:56.448 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:56.448 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:56.448 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:56.448 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:56.448 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:56.448 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:56.448 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:56.448 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:56.448 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:56.448 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:56.448 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:56.448 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:56.458 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:56.458 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:56.458 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 20:59:56.458 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:56.468 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 20:59:56.468 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:56.468 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 20:59:56.468 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 20:59:56.478 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 37078 150\n [Camera]
17-03-17 20:59:56.678 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 20:59:56.838 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 20:59:56.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 20:59:57.098 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 20:59:57.098 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 20:59:57.098 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:57.098 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:57.098 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 20:59:57.098 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 20:59:57.098 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 20:59:57.098 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:57.098 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:57.098 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 20:59:57.288 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37078 808
17-03-17 20:59:57.438 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 20:59:57.478 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 20:59:57.478 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 20:59:57.478 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:57.478 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 20:59:57.478 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 20:59:57.478 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:57.478 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:57.478 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:57.478 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 20:59:57.488 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 20:59:57.638 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 20:59:57.638 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 20:59:57.648 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 20:59:57.778 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 20:59:57.778 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 20:59:57.778 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 20:59:57.778 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 20:59:57.778 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 20:59:57.778 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 20:59:57.778 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 20:59:57.838 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 20:59:57.838 -07 000000012 INF: FPGA: Recv CAMDBLSNAP
17-03-17 20:59:57.838 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 37078 150' command took 2 ms to send, 1351 ms to get response, and 1361 ms overall
17-03-17 20:59:57.838 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.169319
17-03-17 20:59:57.838 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16932 mm
17-03-17 20:59:57.838 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 20:59:57.838 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 36988, sync = True, waitForSettling = False)
17-03-17 20:59:57.838 -07 000000626 INF: Z Motor: Moving to -0.169320 mm, started at -0.168942 mm, distance = -0.38 um
17-03-17 20:59:57.838 -07 000000626 INF: FPGA: Xmit ZDACW 36988\n [Z Motor]
17-03-17 20:59:57.838 -07 000000431 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 20:59:57.838 -07 000000431 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm
17-03-17 20:59:57.838 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 20:59:57.848 -07 000000626 INF: FPGA: 'ZDACW 36988' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 20:59:57.848 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:57.848 -07 000000618 INF: FPGA: Recv YRDPOS 141369
17-03-17 20:59:57.858 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 20:59:57.858 -07 000000431 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:57.858 -07 000000431 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 20:59:57.858 -07 000000431 INF: Y Motor: Moving 1352 steps-31
17-03-17 20:59:57.858 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:57.858 -07 000000618 INF: FPGA: Recv ZDACR 36988
17-03-17 20:59:57.868 -07 000000626 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:57.868 -07 000000626 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-17 20:59:57.868 -07 000000431 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 20:59:58.158 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 20:59:58.158 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 20:59:58.158 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:58.158 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 20:59:58.158 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 20:59:58.158 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 20:59:58.168 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 20:59:58.168 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 20:59:58.168 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 521 ms.
17-03-17 20:59:58.168 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 20:59:58.248 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-17 20:59:58.248 -07 000000431 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 373 ms to get response, and 392 ms overall
17-03-17 20:59:58.288 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:58.288 -07 000000512 INF: FPGA: Recv YRDPOS 143080
17-03-17 20:59:58.298 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:58.298 -07 000000431 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:58.298 -07 000000431 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 20:59:58.298 -07 000000431 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.845 mm, average velocity = 2.150 mm/sec
17-03-17 20:59:59.248 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 20:59:59.248 -07 000000618 INF: FPGA: Recv YRDPOS 143080
17-03-17 20:59:59.258 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 20:59:59.258 -07 000000431 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 20:59:59.268 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.994908,
17-03-17 20:59:59.278 -07 000000431 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 20:59:59.278 -07 000000431 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 20:59:59.278 -07 000000431 INF: Y Motor: Moved to 69.8633 after 1439 ms (table move)
17-03-17 20:59:59.278 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169320 mm (DAC = 36988)
17-03-17 20:59:59.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.308 -07 000000502 INF: FPGA: Recv ZSGSRD 35640
17-03-17 20:59:59.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-17 20:59:59.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.328 -07 000000429 INF: FPGA: Recv ZSGSRD 35649
17-03-17 20:59:59.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 20:59:59.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.338 -07 000000576 INF: FPGA: Recv ZSGSRD 35655
17-03-17 20:59:59.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.348 -07 000000502 INF: FPGA: Recv ZSGSRD 35641
17-03-17 20:59:59.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.358 -07 000000618 INF: FPGA: Recv ZSGSRD 35644
17-03-17 20:59:59.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.368 -07 000000576 INF: FPGA: Recv ZSGSRD 35644
17-03-17 20:59:59.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.378 -07 000000512 INF: FPGA: Recv ZSGSRD 35639
17-03-17 20:59:59.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.388 -07 000000547 INF: FPGA: Recv ZSGSRD 35644
17-03-17 20:59:59.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.398 -07 000000569 INF: FPGA: Recv ZSGSRD 35646
17-03-17 20:59:59.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.408 -07 000000431 INF: FPGA: Recv ZSGSRD 35651
17-03-17 20:59:59.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.418 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:59.418 -07 000000012 INF: FPGA: Recv ZPIEZORD 31708
17-03-17 20:59:59.428 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.428 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.644 V. Piezo Error = -8.7 V.
17-03-17 20:59:59.428 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35645 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35644 (-168.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35639 (-168.4 uncal um), Max = 35655 (-168.5 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 20:59:59.428 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35645, posNoise = 10, negNoise = 6
17-03-17 20:59:59.428 -07 000000610 INF: Z Motor: After move to -0.169320, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:59.428 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 141 ms (allowed 150 ms), total time = 1584 ms
17-03-17 20:59:59.428 -07 000000610 INF: Z Motor: Waiting extra 9 ms after reading position to reach expected total of 150 ms
17-03-17 20:59:59.438 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-17 20:59:59.438 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 20:59:59.438 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.169314393804204. ----------
17-03-17 20:59:59.438 -07 000000610 INF: Cycle	45	Tile	13	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 20:59:59.438 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36811, sync = True, waitForSettling = True)
17-03-17 20:59:59.438 -07 000000610 INF: Z Motor: Moving to -0.168510 mm, started at -0.169314 mm, distance = 0.80 um
17-03-17 20:59:59.438 -07 000000610 INF: FPGA: Xmit ZDACW 36811\n [Z Motor]
17-03-17 20:59:59.438 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 20:59:59.448 -07 000000610 INF: FPGA: 'ZDACW 36811' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 20:59:59.448 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 20:59:59.448 -07 000000547 INF: FPGA: Recv ZDACR 36811
17-03-17 20:59:59.458 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.458 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 20:59:59.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.608 -07 000000569 INF: FPGA: Recv ZSGSRD 35516
17-03-17 20:59:59.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.638 -07 000000429 INF: FPGA: Recv ZSGSRD 35522
17-03-17 20:59:59.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 20:59:59.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.658 -07 000000431 INF: FPGA: Recv ZSGSRD 35526
17-03-17 20:59:59.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 20:59:59.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.668 -07 000000626 INF: FPGA: Recv ZSGSRD 35516
17-03-17 20:59:59.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.678 -07 000000431 INF: FPGA: Recv ZSGSRD 35518
17-03-17 20:59:59.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.688 -07 000000431 INF: FPGA: Recv ZSGSRD 35523
17-03-17 20:59:59.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.698 -07 000000431 INF: FPGA: Recv ZSGSRD 35519
17-03-17 20:59:59.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.708 -07 000000431 INF: FPGA: Recv ZSGSRD 35517
17-03-17 20:59:59.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.718 -07 000000576 INF: FPGA: Recv ZSGSRD 35524
17-03-17 20:59:59.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 20:59:59.728 -07 000000576 INF: FPGA: Recv ZSGSRD 35526
17-03-17 20:59:59.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.738 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 20:59:59.738 -07 000000576 INF: FPGA: Recv ZPIEZORD 31499
17-03-17 20:59:59.748 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 20:59:59.748 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.617 V. Piezo Error = -8.9 V.
17-03-17 20:59:59.748 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35521 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35520 (-167.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35516 (-167.6 uncal um), Max = 35526 (-167.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 20:59:59.748 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35521, posNoise = 5, negNoise = 5
17-03-17 20:59:59.748 -07 000000610 INF: Z Motor: After move to -0.168510, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 20:59:59.748 -07 000000610 INF: Z Motor: MoveAbsStepped took 306 ms)
17-03-17 20:59:59.748 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 20:59:59.748 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 20:59:59.748 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 20:59:59.748 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 20:59:59.748 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 20:59:59.748 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 20:59:59.748 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 20:59:59.748 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 20:59:59.748 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 20:59:59.748 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 20:59:59.748 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 20:59:59.748 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 20:59:59.748 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 20:59:59.748 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 20:59:59.758 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 20:59:59.758 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 20:59:59.768 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 20:59:59.768 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 20:59:59.768 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 20:59:59.768 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 20:59:59.768 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36988 150\n [Camera]
17-03-17 20:59:59.968 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:00.398 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:00.398 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:00.398 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:00.398 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:00.398 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:00.398 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:00.398 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:00.398 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:00.398 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:00.398 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:00:00.588 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36988 808
17-03-17 21:00:00.738 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:00.768 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 21:00:00.768 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:00:00.768 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:00.768 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:00:00.768 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 21:00:00.768 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:00.778 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:00.778 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:00.778 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:00:00.788 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:00:00.938 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:00.938 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:00.938 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:01.058 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:01.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:01.058 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:01.058 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:01.058 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:00:01.058 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:01.058 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:00:01.128 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:01.128 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:01.128 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36988 150' command took 2 ms to send, 1348 ms to get response, and 1360 ms overall
17-03-17 21:00:01.138 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168833
17-03-17 21:00:01.138 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16883 mm
17-03-17 21:00:01.138 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:01.138 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 21:00:01.138 -07 000000480 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-17 21:00:01.138 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:01.138 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 36882, sync = True, waitForSettling = False)
17-03-17 21:00:01.138 -07 000000626 INF: Z Motor: Moving to -0.168835 mm, started at -0.168518 mm, distance = -0.32 um
17-03-17 21:00:01.138 -07 000000547 INF: FPGA: Recv YRDPOS 143080
17-03-17 21:00:01.148 -07 000000626 INF: FPGA: Xmit ZDACW 36882\n [Z Motor]
17-03-17 21:00:01.148 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:01.148 -07 000000480 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:01.148 -07 000000480 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:01.148 -07 000000480 INF: Y Motor: Moving 1343 steps-19
17-03-17 21:00:01.148 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:00:01.158 -07 000000626 INF: FPGA: 'ZDACW 36882' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:00:01.158 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:01.158 -07 000000012 INF: FPGA: Recv ZDACR 36882
17-03-17 21:00:01.168 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:01.168 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:01.168 -07 000000626 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:00:01.448 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 21:00:01.448 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:00:01.448 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:01.458 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 390 ms.
17-03-17 21:00:01.458 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:00:01.458 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:01.458 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:00:01.458 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 516 ms.
17-03-17 21:00:01.458 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:01.468 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-17 21:00:01.548 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 21:00:01.548 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 374 ms to get response, and 403 ms overall
17-03-17 21:00:01.588 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:01.588 -07 000000012 INF: FPGA: Recv YRDPOS 144770
17-03-17 21:00:01.598 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:01.598 -07 000000480 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:01.598 -07 000000480 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:00:01.598 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 403 ms, distance = 0.839 mm, average velocity = 2.083 mm/sec
17-03-17 21:00:01.838 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:01.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:02.548 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:02.548 -07 000000429 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:00:02.558 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:02.558 -07 000000480 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:02.578 -07 000000480 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:02.578 -07 000000480 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:00:02.578 -07 000000480 INF: Y Motor: Moved to 70.6890 after 1440 ms (table move)
17-03-17 21:00:02.578 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168835 mm (DAC = 36882)
17-03-17 21:00:02.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.578 -07 000000480 INF: FPGA: Recv ZSGSRD 35572
17-03-17 21:00:02.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:02.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.588 -07 000000480 INF: FPGA: Recv ZSGSRD 35568
17-03-17 21:00:02.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.598 -07 000000576 INF: FPGA: Recv ZSGSRD 35568
17-03-17 21:00:02.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.608 -07 000000431 INF: FPGA: Recv ZSGSRD 35570
17-03-17 21:00:02.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.618 -07 000000012 INF: FPGA: Recv ZSGSRD 35570
17-03-17 21:00:02.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.628 -07 000000502 INF: FPGA: Recv ZSGSRD 35572
17-03-17 21:00:02.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.638 -07 000000547 INF: FPGA: Recv ZSGSRD 35572
17-03-17 21:00:02.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.648 -07 000000618 INF: FPGA: Recv ZSGSRD 35568
17-03-17 21:00:02.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.658 -07 000000480 INF: FPGA: Recv ZSGSRD 35570
17-03-17 21:00:02.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.668 -07 000000502 INF: FPGA: Recv ZSGSRD 35566
17-03-17 21:00:02.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.678 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:02.678 -07 000000480 INF: FPGA: Recv ZPIEZORD 31628
17-03-17 21:00:02.688 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.688 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.628 V. Piezo Error = -8.7 V.
17-03-17 21:00:02.688 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35570 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35570 (-168.0 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35566 (-167.9 uncal um), Max = 35572 (-168.0 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:00:02.688 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35570, posNoise = 2, negNoise = 4
17-03-17 21:00:02.688 -07 000000610 INF: Z Motor: After move to -0.168835, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:02.688 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 104 ms (allowed 150 ms), total time = 1545 ms
17-03-17 21:00:02.688 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:02.738 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-17 21:00:02.738 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:02.738 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.168832577893572. ----------
17-03-17 21:00:02.738 -07 000000610 INF: Cycle	45	Tile	14	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:02.738 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36705, sync = True, waitForSettling = True)
17-03-17 21:00:02.738 -07 000000610 INF: Z Motor: Moving to -0.168025 mm, started at -0.168833 mm, distance = 0.81 um
17-03-17 21:00:02.738 -07 000000610 INF: FPGA: Xmit ZDACW 36705\n [Z Motor]
17-03-17 21:00:02.738 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:00:02.748 -07 000000610 INF: FPGA: 'ZDACW 36705' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:02.748 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:02.748 -07 000000012 INF: FPGA: Recv ZDACR 36705
17-03-17 21:00:02.758 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.758 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:02.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.908 -07 000000576 INF: FPGA: Recv ZSGSRD 35444
17-03-17 21:00:02.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:02.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.918 -07 000000618 INF: FPGA: Recv ZSGSRD 35445
17-03-17 21:00:02.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.928 -07 000000429 INF: FPGA: Recv ZSGSRD 35446
17-03-17 21:00:02.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.938 -07 000000502 INF: FPGA: Recv ZSGSRD 35446
17-03-17 21:00:02.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.948 -07 000000576 INF: FPGA: Recv ZSGSRD 35438
17-03-17 21:00:02.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.958 -07 000000618 INF: FPGA: Recv ZSGSRD 35444
17-03-17 21:00:02.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.968 -07 000000618 INF: FPGA: Recv ZSGSRD 35448
17-03-17 21:00:02.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.978 -07 000000576 INF: FPGA: Recv ZSGSRD 35440
17-03-17 21:00:02.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.988 -07 000000012 INF: FPGA: Recv ZSGSRD 35442
17-03-17 21:00:02.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:02.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:02.998 -07 000000480 INF: FPGA: Recv ZSGSRD 35445
17-03-17 21:00:03.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:03.008 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:03.008 -07 000000618 INF: FPGA: Recv ZPIEZORD 31446
17-03-17 21:00:03.018 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:03.018 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.601 V. Piezo Error = -8.8 V.
17-03-17 21:00:03.018 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35444 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35444 (-167.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35438 (-167.1 uncal um), Max = 35448 (-167.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:03.018 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35444, posNoise = 4, negNoise = 6
17-03-17 21:00:03.018 -07 000000610 INF: Z Motor: After move to -0.168025, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:03.018 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:00:03.018 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:03.018 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:03.018 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:03.018 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:03.018 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:03.018 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:03.018 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:03.018 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:03.018 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:03.018 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:03.018 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:03.018 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:03.018 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:03.018 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:03.028 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:00:03.028 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:03.038 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:03.038 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:00:03.038 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:03.038 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:00:03.038 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36882 150\n [Camera]
17-03-17 21:00:03.238 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:03.668 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:03.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:03.668 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:03.668 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:03.668 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:00:03.668 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:03.668 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:03.668 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:03.668 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:03.668 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:00:03.858 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36882 808
17-03-17 21:00:04.008 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:04.058 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:00:04.058 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:04.058 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:04.058 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:00:04.058 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:00:04.058 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:04.058 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:04.058 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:00:04.058 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:04.068 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:00:04.208 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:04.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:04.208 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:04.208 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:04.218 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:00:04.218 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:04.218 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:04.218 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:04.218 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:04.218 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-17 21:00:04.408 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:04.408 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:04.408 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36882 150' command took 4 ms to send, 1350 ms to get response, and 1362 ms overall
17-03-17 21:00:04.408 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.168431
17-03-17 21:00:04.408 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16843 mm
17-03-17 21:00:04.408 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:04.408 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 21:00:04.408 -07 000000576 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm
17-03-17 21:00:04.408 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:04.408 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 36794, sync = True, waitForSettling = False)
17-03-17 21:00:04.408 -07 000000618 INF: Z Motor: Moving to -0.168432 mm, started at -0.168023 mm, distance = -0.41 um
17-03-17 21:00:04.418 -07 000000431 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:00:04.418 -07 000000618 INF: FPGA: Xmit ZDACW 36794\n [Z Motor]
17-03-17 21:00:04.418 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:00:04.418 -07 000000576 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:04.418 -07 000000576 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:04.418 -07 000000576 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:00:04.418 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:00:04.428 -07 000000618 INF: FPGA: 'ZDACW 36794' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:00:04.428 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:04.438 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:04.438 -07 000000502 INF: FPGA: Recv ZDACR 36794
17-03-17 21:00:04.448 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:00:04.448 -07 000000618 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-17 21:00:04.598 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:00:04.598 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:04.598 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:04.598 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:00:04.598 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:00:04.598 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:04.598 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:04.598 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:00:04.598 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:04.608 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:00:04.648 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.990831,
17-03-17 21:00:04.798 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-17 21:00:04.798 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:00:04.838 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:04.848 -07 000000547 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:00:04.848 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:00:04.848 -07 000000576 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:04.848 -07 000000576 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:00:04.848 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.180 mm/sec
17-03-17 21:00:05.798 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:05.798 -07 000000547 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:00:05.808 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:05.808 -07 000000576 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:05.828 -07 000000576 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:05.828 -07 000000576 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:05.828 -07 000000576 INF: Y Motor: Moved to 71.5190 after 1417 ms (table move)
17-03-17 21:00:05.828 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168432 mm (DAC = 36794)
17-03-17 21:00:05.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.838 -07 000000618 INF: FPGA: Recv ZSGSRD 35514
17-03-17 21:00:05.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:00:05.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.838 -07 000000502 INF: FPGA: Recv ZSGSRD 35507
17-03-17 21:00:05.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.848 -07 000000502 INF: FPGA: Recv ZSGSRD 35513
17-03-17 21:00:05.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.858 -07 000000502 INF: FPGA: Recv ZSGSRD 35512
17-03-17 21:00:05.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.868 -07 000000502 INF: FPGA: Recv ZSGSRD 35514
17-03-17 21:00:05.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.878 -07 000000502 INF: FPGA: Recv ZSGSRD 35517
17-03-17 21:00:05.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.888 -07 000000576 INF: FPGA: Recv ZSGSRD 35509
17-03-17 21:00:05.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.898 -07 000000576 INF: FPGA: Recv ZSGSRD 35502
17-03-17 21:00:05.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.908 -07 000000502 INF: FPGA: Recv ZSGSRD 35505
17-03-17 21:00:05.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:05.918 -07 000000502 INF: FPGA: Recv ZSGSRD 35508
17-03-17 21:00:05.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:05.928 -07 000000502 INF: FPGA: Recv ZPIEZORD 31521
17-03-17 21:00:05.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:05.938 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.614 V. Piezo Error = -8.8 V.
17-03-17 21:00:05.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.4 um, Read 10 ADC samples: Avg = 35510 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35510 (-167.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35502 (-167.5 uncal um), Max = 35517 (-167.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:00:05.938 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35510, posNoise = 7, negNoise = 8
17-03-17 21:00:05.938 -07 000000610 INF: Z Motor: After move to -0.168432, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:05.938 -07 000000610 INF: Z Motor: Settle wait time = 1418 ms, measure time = 104 ms (allowed 150 ms), total time = 1522 ms
17-03-17 21:00:05.938 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:05.988 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-17 21:00:05.988 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:05.988 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.168447125165067. ----------
17-03-17 21:00:05.988 -07 000000610 INF: Cycle	45	Tile	15	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:05.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36617, sync = True, waitForSettling = True)
17-03-17 21:00:05.988 -07 000000610 INF: Z Motor: Moving to -0.167622 mm, started at -0.168447 mm, distance = 0.83 um
17-03-17 21:00:05.988 -07 000000610 INF: FPGA: Xmit ZDACW 36617\n [Z Motor]
17-03-17 21:00:05.988 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:00:05.998 -07 000000610 INF: FPGA: 'ZDACW 36617' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:05.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:05.998 -07 000000431 INF: FPGA: Recv ZDACR 36617
17-03-17 21:00:06.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:06.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.158 -07 000000431 INF: FPGA: Recv ZSGSRD 35387
17-03-17 21:00:06.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:06.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.168 -07 000000547 INF: FPGA: Recv ZSGSRD 35384
17-03-17 21:00:06.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.178 -07 000000431 INF: FPGA: Recv ZSGSRD 35388
17-03-17 21:00:06.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.188 -07 000000431 INF: FPGA: Recv ZSGSRD 35387
17-03-17 21:00:06.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.198 -07 000000429 INF: FPGA: Recv ZSGSRD 35389
17-03-17 21:00:06.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.208 -07 000000431 INF: FPGA: Recv ZSGSRD 35384
17-03-17 21:00:06.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.218 -07 000000480 INF: FPGA: Recv ZSGSRD 35376
17-03-17 21:00:06.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.228 -07 000000431 INF: FPGA: Recv ZSGSRD 35380
17-03-17 21:00:06.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.238 -07 000000502 INF: FPGA: Recv ZSGSRD 35385
17-03-17 21:00:06.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:06.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:06.248 -07 000000502 INF: FPGA: Recv ZSGSRD 35375
17-03-17 21:00:06.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:06.258 -07 000000431 INF: FPGA: Recv ZPIEZORD 31363
17-03-17 21:00:06.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:06.268 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.587 V. Piezo Error = -8.9 V.
17-03-17 21:00:06.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35384 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35384 (-166.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35375 (-166.7 uncal um), Max = 35389 (-166.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:00:06.268 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35384, posNoise = 5, negNoise = 9
17-03-17 21:00:06.268 -07 000000610 INF: Z Motor: After move to -0.167622, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:06.268 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:00:06.268 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:06.268 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:06.268 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:06.268 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:06.268 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:06.268 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:06.268 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:06.268 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:06.268 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:06.268 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:06.268 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:06.268 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:06.278 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:06.278 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:06.278 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:06.278 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:06.288 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:06.288 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:00:06.288 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:06.288 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:00:06.288 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36794 150\n [Camera]
17-03-17 21:00:06.488 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:06.838 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:06.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:06.918 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:06.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:06.918 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:06.918 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:06.918 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:00:06.918 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:06.918 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:06.918 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:07.038 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:07.038 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:00:07.108 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36794 808
17-03-17 21:00:07.258 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:07.298 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:00:07.298 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:07.298 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:07.298 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:07.298 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:07.418 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:00:07.418 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:00:07.418 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:07.418 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:07.428 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms.
17-03-17 21:00:07.458 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:07.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:07.458 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:07.468 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:07.468 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:07.468 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:07.468 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:07.468 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:07.468 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:07.468 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:00:07.648 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:07.658 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:07.658 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36794 150' command took 2 ms to send, 1350 ms to get response, and 1360 ms overall
17-03-17 21:00:07.658 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:00:07.658 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.167637674435205. ------
17-03-17 21:00:07.658 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:07.658 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17384 mm
17-03-17 21:00:07.658 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:07.668 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:07.668 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:07.668 -07 000000480 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:00:07.668 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 21:00:07.668 -07 000000382 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-17 21:00:07.668 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 37976, sync = True, waitForSettling = False)
17-03-17 21:00:07.668 -07 000000012 INF: Z Motor: Moving to -0.173843 mm, started at -0.167638 mm, distance = -6.21 um
17-03-17 21:00:07.678 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:07.678 -07 000000576 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:00:07.688 -07 000000012 INF: FPGA: Xmit ZDACW 37976\n [Z Motor]
17-03-17 21:00:07.688 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:00:07.688 -07 000000382 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:07.688 -07 000000382 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:07.688 -07 000000382 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:00:07.688 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:00:07.698 -07 000000012 INF: FPGA: 'ZDACW 37976' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 21:00:07.698 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:07.698 -07 000000576 INF: FPGA: Recv ZDACR 37976
17-03-17 21:00:07.708 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:07.708 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:07.708 -07 000000012 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-17 21:00:07.838 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:00:07.848 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:00:07.848 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:07.848 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:00:07.848 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:00:07.848 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:07.848 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:07.848 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:00:07.848 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:07.858 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:00:07.868 -07 000000012 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:00:07.868 -07 000000480 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:00:08.078 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 21:00:08.078 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:00:08.148 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:08.148 -07 000000458 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:00:08.158 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:08.158 -07 000000382 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:08.158 -07 000000382 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:00:08.158 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.120 mm/sec
17-03-17 21:00:09.108 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:09.108 -07 000000480 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:00:09.118 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:09.118 -07 000000382 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:09.138 -07 000000382 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:09.138 -07 000000382 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:09.138 -07 000000382 INF: Y Motor: Moved to 72.3496 after 1469 ms (table move)
17-03-17 21:00:09.138 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173843 mm (DAC = 37976)
17-03-17 21:00:09.138 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.138 -07 000000627 INF: FPGA: Recv ZSGSRD 36357
17-03-17 21:00:09.148 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:09.148 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.148 -07 000000012 INF: FPGA: Recv ZSGSRD 36356
17-03-17 21:00:09.158 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.158 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.158 -07 000000576 INF: FPGA: Recv ZSGSRD 36355
17-03-17 21:00:09.168 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.168 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.168 -07 000000458 INF: FPGA: Recv ZSGSRD 36343
17-03-17 21:00:09.178 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.178 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.178 -07 000000576 INF: FPGA: Recv ZSGSRD 36353
17-03-17 21:00:09.188 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.188 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.188 -07 000000458 INF: FPGA: Recv ZSGSRD 36345
17-03-17 21:00:09.198 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.198 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.198 -07 000000458 INF: FPGA: Recv ZSGSRD 36346
17-03-17 21:00:09.208 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.208 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.208 -07 000000012 INF: FPGA: Recv ZSGSRD 36354
17-03-17 21:00:09.218 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.218 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.218 -07 000000618 INF: FPGA: Recv ZSGSRD 36353
17-03-17 21:00:09.228 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.228 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:09.228 -07 000000627 INF: FPGA: Recv ZSGSRD 36356
17-03-17 21:00:09.238 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.238 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:09.238 -07 000000618 INF: FPGA: Recv ZPIEZORD 32634
17-03-17 21:00:09.248 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.248 -07 000000502 INF: Z Motor: Piezo is near 49.7 V (nominally 0 to 100 V), expect near 57.9 V, since DAC is at 5.795 V. Piezo Error = -8.2 V.
17-03-17 21:00:09.248 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.8 um, Read 10 ADC samples: Avg = 36352 (-173.0 uncal um), Error = 0.9 uncal um, Median = 36354 (-173.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36343 (-172.9 uncal um), Max = 36357 (-173.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:00:09.248 -07 000000502 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36352, posNoise = 5, negNoise = 9
17-03-17 21:00:09.248 -07 000000502 INF: Z Motor: After move to -0.173843, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:09.248 -07 000000502 INF: Z Motor: Settle wait time = 1472 ms, measure time = 104 ms (allowed 150 ms), total time = 1576 ms
17-03-17 21:00:09.248 -07 000000502 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:09.298 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1633 ms
17-03-17 21:00:09.298 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:09.298 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:09.298 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:09.298 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:09.298 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:09.298 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:00:09.298 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:09.298 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:09.298 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:00:09.308 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:00:09.308 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:00:09.318 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:00:09.318 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-17 21:00:09.318 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:00:09.368 -07 000000480 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:00:09.568 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:00:09.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:00:09.568 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:00:09.568 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-17 21:00:09.608 -07 000000618 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:00:09.608 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-17 21:00:09.608 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 285 ms overall
17-03-17 21:00:09.698 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 128 ms.
17-03-17 21:00:09.698 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:09.698 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:00:09.698 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 131 ms.
17-03-17 21:00:09.708 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:09.708 -07 000000618 INF: Autofocus start
17-03-17 21:00:09.708 -07 000000618 INF: MeasureProfile start
17-03-17 21:00:09.708 -07 000000012 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:09.718 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:09.718 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:00:09.718 -07 000000618 INF: MeasureProfile done
17-03-17 21:00:09.718 -07 000000618 INF: X=48  Z correction [um]=0.1739867
17-03-17 21:00:09.718 -07 000000618 INF: Autofocus finished
17-03-17 21:00:09.918 -07 000000382 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:00:09.918 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:00:09.918 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.173856311788429. ----------
17-03-17 21:00:09.928 -07 000000610 INF: Cycle	45	Tile	16	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:09.928 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36526, sync = True, waitForSettling = True)
17-03-17 21:00:09.928 -07 000000610 INF: Z Motor: Moving to -0.167205 mm, started at -0.173856 mm, distance = 6.65 um
17-03-17 21:00:09.928 -07 000000610 INF: FPGA: Xmit ZDACW 36526\n [Z Motor]
17-03-17 21:00:09.928 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:00:09.938 -07 000000610 INF: FPGA: 'ZDACW 36526' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:00:09.938 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:09.938 -07 000000480 INF: FPGA: Recv ZDACR 36526
17-03-17 21:00:09.948 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:09.948 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:10.018 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.011254,
17-03-17 21:00:10.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.098 -07 000000012 INF: FPGA: Recv ZSGSRD 35313
17-03-17 21:00:10.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:10.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.108 -07 000000480 INF: FPGA: Recv ZSGSRD 35316
17-03-17 21:00:10.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.118 -07 000000502 INF: FPGA: Recv ZSGSRD 35322
17-03-17 21:00:10.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.128 -07 000000458 INF: FPGA: Recv ZSGSRD 35312
17-03-17 21:00:10.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.138 -07 000000576 INF: FPGA: Recv ZSGSRD 35317
17-03-17 21:00:10.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.148 -07 000000618 INF: FPGA: Recv ZSGSRD 35318
17-03-17 21:00:10.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.158 -07 000000012 INF: FPGA: Recv ZSGSRD 35317
17-03-17 21:00:10.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.168 -07 000000627 INF: FPGA: Recv ZSGSRD 35320
17-03-17 21:00:10.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.178 -07 000000012 INF: FPGA: Recv ZSGSRD 35308
17-03-17 21:00:10.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:10.188 -07 000000480 INF: FPGA: Recv ZSGSRD 35318
17-03-17 21:00:10.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.198 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:10.198 -07 000000576 INF: FPGA: Recv ZPIEZORD 31272
17-03-17 21:00:10.208 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:10.208 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.574 V. Piezo Error = -8.9 V.
17-03-17 21:00:10.208 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35316 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35317 (-166.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35308 (-166.3 uncal um), Max = 35322 (-166.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:00:10.208 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35316, posNoise = 6, negNoise = 8
17-03-17 21:00:10.208 -07 000000610 INF: Z Motor: After move to -0.167205, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:10.208 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 21:00:10.208 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:10.208 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:10.208 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:10.208 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:10.208 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:10.208 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:10.208 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:10.208 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:10.208 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:00:10.208 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:10.208 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:00:10.208 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:10.218 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:00:10.218 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:10.218 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 5 ms.
17-03-17 21:00:10.218 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:10.228 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:00:10.228 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 21:00:10.228 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 21:00:10.228 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:00:10.228 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36703 150\n [Camera]
17-03-17 21:00:10.428 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:10.858 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:10.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:10.858 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:10.858 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:10.858 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:10.858 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:00:10.858 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:10.858 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:10.858 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:10.858 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:00:11.048 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36703 808
17-03-17 21:00:11.198 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:11.238 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:00:11.238 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:00:11.238 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:11.238 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:11.238 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:00:11.238 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:11.238 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:11.248 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:11.248 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:00:11.248 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:00:11.398 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:11.398 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:11.398 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:11.518 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:11.518 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:11.518 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:11.518 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:11.518 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:00:11.518 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:11.518 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:00:11.588 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:11.588 -07 000000476 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:11.588 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36703 150' command took 2 ms to send, 1357 ms to get response, and 1360 ms overall
17-03-17 21:00:11.588 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167697
17-03-17 21:00:11.588 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16770 mm
17-03-17 21:00:11.588 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:11.598 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 36633, sync = True, waitForSettling = False)
17-03-17 21:00:11.598 -07 000000458 INF: Z Motor: Moving to -0.167695 mm, started at -0.167201 mm, distance = -0.49 um
17-03-17 21:00:11.598 -07 000000458 INF: FPGA: Xmit ZDACW 36633\n [Z Motor]
17-03-17 21:00:11.598 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 21:00:11.598 -07 000000480 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-17 21:00:11.598 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:00:11.608 -07 000000458 INF: FPGA: 'ZDACW 36633' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:00:11.608 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:11.608 -07 000000012 INF: FPGA: Recv YRDPOS 148173
17-03-17 21:00:11.618 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:00:11.618 -07 000000480 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:11.618 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:11.618 -07 000000476 INF: FPGA: Recv ZDACR 36633
17-03-17 21:00:11.618 -07 000000480 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:11.618 -07 000000480 INF: Y Motor: Moving 1348 steps-27
17-03-17 21:00:11.628 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:00:11.628 -07 000000458 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-17 21:00:11.628 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:11.838 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:11.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:11.898 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 21:00:11.898 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 21:00:11.898 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:11.908 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 21:00:11.908 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:00:11.908 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:11.908 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:11.908 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:11.908 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 509 ms.
17-03-17 21:00:11.918 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 21:00:11.998 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:00:11.998 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-17 21:00:12.038 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:12.038 -07 000000431 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:00:12.048 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:12.048 -07 000000480 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:12.048 -07 000000480 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 21:00:12.048 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.843 mm, average velocity = 2.201 mm/sec
17-03-17 21:00:12.998 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:12.998 -07 000000576 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:00:13.008 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:13.008 -07 000000480 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:13.028 -07 000000480 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:13.028 -07 000000480 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:13.028 -07 000000480 INF: Y Motor: Moved to 73.1763 after 1429 ms (table move)
17-03-17 21:00:13.028 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167695 mm (DAC = 36633)
17-03-17 21:00:13.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.028 -07 000000012 INF: FPGA: Recv ZSGSRD 35391
17-03-17 21:00:13.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:13.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.038 -07 000000576 INF: FPGA: Recv ZSGSRD 35387
17-03-17 21:00:13.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.048 -07 000000476 INF: FPGA: Recv ZSGSRD 35388
17-03-17 21:00:13.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.058 -07 000000576 INF: FPGA: Recv ZSGSRD 35394
17-03-17 21:00:13.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.068 -07 000000382 INF: FPGA: Recv ZSGSRD 35402
17-03-17 21:00:13.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.078 -07 000000576 INF: FPGA: Recv ZSGSRD 35400
17-03-17 21:00:13.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.088 -07 000000382 INF: FPGA: Recv ZSGSRD 35391
17-03-17 21:00:13.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.098 -07 000000012 INF: FPGA: Recv ZSGSRD 35391
17-03-17 21:00:13.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.108 -07 000000476 INF: FPGA: Recv ZSGSRD 35394
17-03-17 21:00:13.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.118 -07 000000012 INF: FPGA: Recv ZSGSRD 35396
17-03-17 21:00:13.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.128 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:13.128 -07 000000476 INF: FPGA: Recv ZPIEZORD 31396
17-03-17 21:00:13.138 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.138 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.590 V. Piezo Error = -8.8 V.
17-03-17 21:00:13.138 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.7 um, Read 10 ADC samples: Avg = 35393 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35392 (-166.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35387 (-166.8 uncal um), Max = 35402 (-166.9 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:13.138 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35393, posNoise = 9, negNoise = 6
17-03-17 21:00:13.138 -07 000000610 INF: Z Motor: After move to -0.167695, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:13.138 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 106 ms (allowed 150 ms), total time = 1538 ms
17-03-17 21:00:13.138 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:13.188 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-17 21:00:13.188 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:13.198 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.167695492344481. ----------
17-03-17 21:00:13.198 -07 000000610 INF: Cycle	45	Tile	17	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:13.198 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36457, sync = True, waitForSettling = True)
17-03-17 21:00:13.198 -07 000000610 INF: Z Motor: Moving to -0.166889 mm, started at -0.167695 mm, distance = 0.81 um
17-03-17 21:00:13.198 -07 000000610 INF: FPGA: Xmit ZDACW 36457\n [Z Motor]
17-03-17 21:00:13.208 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:00:13.208 -07 000000610 INF: FPGA: 'ZDACW 36457' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:00:13.208 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:13.208 -07 000000576 INF: FPGA: Recv ZDACR 36457
17-03-17 21:00:13.218 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:13.218 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:13.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.368 -07 000000429 INF: FPGA: Recv ZSGSRD 35268
17-03-17 21:00:13.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.378 -07 000000502 INF: FPGA: Recv ZSGSRD 35272
17-03-17 21:00:13.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.388 -07 000000382 INF: FPGA: Recv ZSGSRD 35274
17-03-17 21:00:13.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.398 -07 000000012 INF: FPGA: Recv ZSGSRD 35271
17-03-17 21:00:13.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.408 -07 000000382 INF: FPGA: Recv ZSGSRD 35270
17-03-17 21:00:13.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.418 -07 000000012 INF: FPGA: Recv ZSGSRD 35264
17-03-17 21:00:13.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.428 -07 000000626 INF: FPGA: Recv ZSGSRD 35274
17-03-17 21:00:13.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.438 -07 000000476 INF: FPGA: Recv ZSGSRD 35271
17-03-17 21:00:13.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.448 -07 000000502 INF: FPGA: Recv ZSGSRD 35266
17-03-17 21:00:13.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:13.458 -07 000000431 INF: FPGA: Recv ZSGSRD 35275
17-03-17 21:00:13.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.468 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:13.468 -07 000000480 INF: FPGA: Recv ZPIEZORD 31217
17-03-17 21:00:13.478 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:13.478 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.563 V. Piezo Error = -8.9 V.
17-03-17 21:00:13.478 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.9 um, Read 10 ADC samples: Avg = 35270 (-166.0 uncal um), Error = 0.9 uncal um, Median = 35271 (-166.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35264 (-166.0 uncal um), Max = 35275 (-166.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:13.478 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35270, posNoise = 5, negNoise = 6
17-03-17 21:00:13.478 -07 000000610 INF: Z Motor: After move to -0.166889, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:13.478 -07 000000610 INF: Z Motor: MoveAbsStepped took 272 ms)
17-03-17 21:00:13.478 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:13.478 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:13.478 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:13.478 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:13.478 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:13.478 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:13.478 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:13.478 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:13.478 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:00:13.478 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:13.478 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:13.478 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:13.478 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:00:13.478 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:13.478 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:13.478 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:13.488 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:00:13.488 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:13.488 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:00:13.488 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:13.498 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36633 150\n [Camera]
17-03-17 21:00:13.698 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:14.118 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:14.118 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:14.118 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:14.118 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:14.118 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:14.128 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:14.128 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:14.128 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:14.128 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:14.128 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:00:14.308 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36633 808
17-03-17 21:00:14.458 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:14.508 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:00:14.508 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:14.508 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:14.508 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:00:14.508 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:00:14.508 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:14.508 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:14.508 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:00:14.508 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:14.518 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:00:14.668 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:14.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:14.668 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:14.668 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:14.668 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:00:14.668 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:14.668 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:14.668 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:14.668 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:14.668 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-17 21:00:14.858 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:14.858 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:14.858 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36633 150' command took 2 ms to send, 1353 ms to get response, and 1360 ms overall
17-03-17 21:00:14.968 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.167308
17-03-17 21:00:14.968 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16731 mm
17-03-17 21:00:14.978 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:14.978 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 21:00:14.978 -07 000000382 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-17 21:00:14.978 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:14.978 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 36548, sync = True, waitForSettling = False)
17-03-17 21:00:14.978 -07 000000012 INF: Z Motor: Moving to -0.167306 mm, started at -0.166905 mm, distance = -0.40 um
17-03-17 21:00:14.978 -07 000000480 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:00:14.988 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:14.988 -07 000000382 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:14.988 -07 000000382 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:14.988 -07 000000382 INF: Y Motor: Moving 1354 steps-33
17-03-17 21:00:14.988 -07 000000012 INF: FPGA: Xmit ZDACW 36548\n [Z Motor]
17-03-17 21:00:14.988 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:00:14.998 -07 000000012 INF: FPGA: 'ZDACW 36548' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:00:14.998 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:14.998 -07 000000626 INF: FPGA: Recv ZDACR 36548
17-03-17 21:00:15.008 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:15.008 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:15.008 -07 000000012 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-17 21:00:15.048 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:00:15.048 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:00:15.048 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:15.048 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:00:15.048 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:00:15.048 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:15.048 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:15.048 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:15.048 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:15.058 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:00:15.378 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 21:00:15.378 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:00:15.388 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.007176,
17-03-17 21:00:15.438 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:15.438 -07 000000476 INF: FPGA: Recv YRDPOS 151568
17-03-17 21:00:15.448 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 21:00:15.448 -07 000000382 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:15.448 -07 000000382 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 21:00:15.448 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.846 mm, average velocity = 2.126 mm/sec
17-03-17 21:00:16.398 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:16.398 -07 000000480 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:00:16.408 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:16.408 -07 000000382 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:16.418 -07 000000382 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:16.418 -07 000000382 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:00:16.418 -07 000000382 INF: Y Motor: Moved to 74.0083 after 1443 ms (table move)
17-03-17 21:00:16.418 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167306 mm (DAC = 36548)
17-03-17 21:00:16.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.428 -07 000000502 INF: FPGA: Recv ZSGSRD 35341
17-03-17 21:00:16.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:00:16.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.428 -07 000000012 INF: FPGA: Recv ZSGSRD 35334
17-03-17 21:00:16.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:00:16.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.438 -07 000000476 INF: FPGA: Recv ZSGSRD 35332
17-03-17 21:00:16.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.448 -07 000000480 INF: FPGA: Recv ZSGSRD 35333
17-03-17 21:00:16.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.458 -07 000000502 INF: FPGA: Recv ZSGSRD 35337
17-03-17 21:00:16.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.468 -07 000000012 INF: FPGA: Recv ZSGSRD 35337
17-03-17 21:00:16.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.478 -07 000000626 INF: FPGA: Recv ZSGSRD 35329
17-03-17 21:00:16.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.488 -07 000000480 INF: FPGA: Recv ZSGSRD 35336
17-03-17 21:00:16.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:16.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.498 -07 000000012 INF: FPGA: Recv ZSGSRD 35341
17-03-17 21:00:16.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.508 -07 000000476 INF: FPGA: Recv ZSGSRD 35338
17-03-17 21:00:16.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:16.518 -07 000000502 INF: FPGA: Recv ZPIEZORD 31327
17-03-17 21:00:16.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.528 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.577 V. Piezo Error = -8.8 V.
17-03-17 21:00:16.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.3 um, Read 10 ADC samples: Avg = 35336 (-166.5 uncal um), Error = 0.8 uncal um, Median = 35336 (-166.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35329 (-166.4 uncal um), Max = 35341 (-166.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:00:16.528 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35336, posNoise = 5, negNoise = 7
17-03-17 21:00:16.528 -07 000000610 INF: Z Motor: After move to -0.167306, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:16.528 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 102 ms (allowed 150 ms), total time = 1547 ms
17-03-17 21:00:16.528 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:16.578 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-17 21:00:16.578 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:16.578 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.1673293122524. ----------
17-03-17 21:00:16.578 -07 000000610 INF: Cycle	45	Tile	18	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:16.578 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36372, sync = True, waitForSettling = True)
17-03-17 21:00:16.578 -07 000000610 INF: Z Motor: Moving to -0.166500 mm, started at -0.167329 mm, distance = 0.83 um
17-03-17 21:00:16.578 -07 000000610 INF: FPGA: Xmit ZDACW 36372\n [Z Motor]
17-03-17 21:00:16.578 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:00:16.588 -07 000000610 INF: FPGA: 'ZDACW 36372' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:16.588 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:16.588 -07 000000502 INF: FPGA: Recv ZDACR 36372
17-03-17 21:00:16.598 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.598 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:16.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.748 -07 000000382 INF: FPGA: Recv ZSGSRD 35213
17-03-17 21:00:16.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:16.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.758 -07 000000431 INF: FPGA: Recv ZSGSRD 35211
17-03-17 21:00:16.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.768 -07 000000618 INF: FPGA: Recv ZSGSRD 35210
17-03-17 21:00:16.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.778 -07 000000502 INF: FPGA: Recv ZSGSRD 35208
17-03-17 21:00:16.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.788 -07 000000480 INF: FPGA: Recv ZSGSRD 35211
17-03-17 21:00:16.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.798 -07 000000476 INF: FPGA: Recv ZSGSRD 35207
17-03-17 21:00:16.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.808 -07 000000382 INF: FPGA: Recv ZSGSRD 35210
17-03-17 21:00:16.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.818 -07 000000502 INF: FPGA: Recv ZSGSRD 35210
17-03-17 21:00:16.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.828 -07 000000480 INF: FPGA: Recv ZSGSRD 35213
17-03-17 21:00:16.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:16.838 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:16.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:16.838 -07 000000626 INF: FPGA: Recv ZSGSRD 35209
17-03-17 21:00:16.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.848 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:16.848 -07 000000480 INF: FPGA: Recv ZPIEZORD 31127
17-03-17 21:00:16.858 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:16.858 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.550 V. Piezo Error = -9.0 V.
17-03-17 21:00:16.858 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.5 um, Read 10 ADC samples: Avg = 35210 (-165.7 uncal um), Error = 0.8 uncal um, Median = 35210 (-165.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35207 (-165.6 uncal um), Max = 35213 (-165.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:00:16.858 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35210, posNoise = 3, negNoise = 3
17-03-17 21:00:16.858 -07 000000610 INF: Z Motor: After move to -0.166500, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:16.858 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:00:16.858 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:16.858 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:16.858 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:16.858 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:16.858 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:16.858 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:16.858 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:16.858 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:16.858 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:16.858 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:16.858 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:16.858 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:16.858 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:16.858 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:16.868 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:16.868 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:16.878 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:16.878 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:00:16.878 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:16.878 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:00:16.878 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36548 150\n [Camera]
17-03-17 21:00:17.078 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:17.508 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:17.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:17.508 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:17.508 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:17.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:17.508 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:17.508 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:17.508 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:00:17.508 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:17.508 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:00:17.698 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36548 808
17-03-17 21:00:17.848 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:17.878 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:00:17.878 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 21:00:17.878 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:17.878 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 21:00:17.888 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 21:00:17.888 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:17.888 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:17.888 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:00:17.888 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:17.898 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:00:18.048 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:18.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:18.048 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:18.058 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:18.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:18.058 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:18.058 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:18.058 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:18.058 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:18.058 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:00:18.238 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:18.238 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:18.238 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36548 150' command took 2 ms to send, 1348 ms to get response, and 1360 ms overall
17-03-17 21:00:18.238 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.166847
17-03-17 21:00:18.248 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16685 mm
17-03-17 21:00:18.248 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:18.258 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 36448, sync = True, waitForSettling = False)
17-03-17 21:00:18.258 -07 000000431 INF: Z Motor: Moving to -0.166848 mm, started at -0.166520 mm, distance = -0.33 um
17-03-17 21:00:18.258 -07 000000431 INF: FPGA: Xmit ZDACW 36448\n [Z Motor]
17-03-17 21:00:18.258 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 21:00:18.258 -07 000000382 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-17 21:00:18.258 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:00:18.268 -07 000000431 INF: FPGA: 'ZDACW 36448' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:18.268 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:18.268 -07 000000618 INF: FPGA: Recv ZDACR 36448
17-03-17 21:00:18.278 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:18.278 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:18.278 -07 000000431 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-17 21:00:18.278 -07 000000626 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:00:18.288 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 21:00:18.288 -07 000000382 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:18.288 -07 000000382 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:18.288 -07 000000382 INF: Y Motor: Moving 1351 steps-30
17-03-17 21:00:18.288 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:18.438 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:00:18.438 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:00:18.438 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:18.448 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:18.448 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:00:18.448 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:18.448 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:18.448 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:18.448 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:00:18.448 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:00:18.658 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:00:18.658 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-17 21:00:18.688 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:18.688 -07 000000502 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:00:18.698 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:18.698 -07 000000382 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:18.698 -07 000000382 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-17 21:00:18.698 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.234 mm/sec
17-03-17 21:00:19.648 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:19.648 -07 000000438 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:00:19.658 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:19.658 -07 000000382 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:19.668 -07 000000382 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:19.668 -07 000000382 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:19.668 -07 000000382 INF: Y Motor: Moved to 74.8320 after 1413 ms (table move)
17-03-17 21:00:19.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166848 mm (DAC = 36448)
17-03-17 21:00:19.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.678 -07 000000626 INF: FPGA: Recv ZSGSRD 35262
17-03-17 21:00:19.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:00:19.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.678 -07 000000626 INF: FPGA: Recv ZSGSRD 35267
17-03-17 21:00:19.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:19.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.688 -07 000000626 INF: FPGA: Recv ZSGSRD 35259
17-03-17 21:00:19.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.698 -07 000000382 INF: FPGA: Recv ZSGSRD 35261
17-03-17 21:00:19.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.708 -07 000000012 INF: FPGA: Recv ZSGSRD 35262
17-03-17 21:00:19.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.718 -07 000000433 INF: FPGA: Recv ZSGSRD 35272
17-03-17 21:00:19.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.728 -07 000000012 INF: FPGA: Recv ZSGSRD 35272
17-03-17 21:00:19.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.738 -07 000000382 INF: FPGA: Recv ZSGSRD 35262
17-03-17 21:00:19.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.748 -07 000000431 INF: FPGA: Recv ZSGSRD 35259
17-03-17 21:00:19.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.758 -07 000000626 INF: FPGA: Recv ZSGSRD 35260
17-03-17 21:00:19.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:19.768 -07 000000476 INF: FPGA: Recv ZPIEZORD 31214
17-03-17 21:00:19.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.778 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.562 V. Piezo Error = -8.9 V.
17-03-17 21:00:19.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35264 (-166.0 uncal um), Error = 0.8 uncal um, Median = 35262 (-166.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35259 (-166.0 uncal um), Max = 35272 (-166.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:00:19.778 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35264, posNoise = 8, negNoise = 5
17-03-17 21:00:19.778 -07 000000610 INF: Z Motor: After move to -0.166848, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:19.778 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 102 ms (allowed 150 ms), total time = 1518 ms
17-03-17 21:00:19.778 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:19.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1579 ms
17-03-17 21:00:19.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:19.828 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.166866768978193. ----------
17-03-17 21:00:19.828 -07 000000610 INF: Cycle	45	Tile	19	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:19.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36271, sync = True, waitForSettling = True)
17-03-17 21:00:19.828 -07 000000610 INF: Z Motor: Moving to -0.166038 mm, started at -0.166867 mm, distance = 0.83 um
17-03-17 21:00:19.828 -07 000000610 INF: FPGA: Xmit ZDACW 36271\n [Z Motor]
17-03-17 21:00:19.828 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:00:19.838 -07 000000610 INF: FPGA: 'ZDACW 36271' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:19.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:19.838 -07 000000431 INF: FPGA: Recv ZDACR 36271
17-03-17 21:00:19.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:19.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:19.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:19.998 -07 000000476 INF: FPGA: Recv ZSGSRD 35132
17-03-17 21:00:20.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:20.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.008 -07 000000431 INF: FPGA: Recv ZSGSRD 35139
17-03-17 21:00:20.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.018 -07 000000012 INF: FPGA: Recv ZSGSRD 35139
17-03-17 21:00:20.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.028 -07 000000382 INF: FPGA: Recv ZSGSRD 35143
17-03-17 21:00:20.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.038 -07 000000476 INF: FPGA: Recv ZSGSRD 35140
17-03-17 21:00:20.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.048 -07 000000431 INF: FPGA: Recv ZSGSRD 35135
17-03-17 21:00:20.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.058 -07 000000476 INF: FPGA: Recv ZSGSRD 35137
17-03-17 21:00:20.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.068 -07 000000431 INF: FPGA: Recv ZSGSRD 35131
17-03-17 21:00:20.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.078 -07 000000476 INF: FPGA: Recv ZSGSRD 35136
17-03-17 21:00:20.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:20.088 -07 000000626 INF: FPGA: Recv ZSGSRD 35137
17-03-17 21:00:20.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.098 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:20.098 -07 000000012 INF: FPGA: Recv ZPIEZORD 31041
17-03-17 21:00:20.108 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:20.108 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.535 V. Piezo Error = -9.0 V.
17-03-17 21:00:20.108 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.0 um, Read 10 ADC samples: Avg = 35137 (-165.2 uncal um), Error = 0.9 uncal um, Median = 35137 (-165.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35131 (-165.1 uncal um), Max = 35143 (-165.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:20.108 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35137, posNoise = 6, negNoise = 6
17-03-17 21:00:20.108 -07 000000610 INF: Z Motor: After move to -0.166038, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:20.108 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 21:00:20.108 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:20.108 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:20.108 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:20.108 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:20.108 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:20.108 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:20.108 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:20.108 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:20.108 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:20.108 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:20.108 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:20.108 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:20.118 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:20.118 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:20.118 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:00:20.118 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:20.128 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:00:20.128 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:20.128 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:00:20.128 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:20.128 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 36448 150\n [Camera]
17-03-17 21:00:20.328 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:20.748 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:20.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:20.758 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.012614,
17-03-17 21:00:20.758 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:20.758 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:20.758 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:00:20.758 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:20.758 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:20.758 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:20.758 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:20.758 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 21:00:20.938 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36448 808
17-03-17 21:00:21.088 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:21.128 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:00:21.128 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:00:21.128 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:21.128 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:00:21.128 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:00:21.128 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:21.138 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:21.138 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:00:21.138 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:21.148 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:00:21.298 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:21.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:21.298 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:21.298 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:21.298 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:00:21.298 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:21.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:21.298 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:21.298 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:21.298 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:00:21.488 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:21.488 -07 000000433 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:21.488 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 36448 150' command took 2 ms to send, 1353 ms to get response, and 1360 ms overall
17-03-17 21:00:21.688 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 388 ms.
17-03-17 21:00:21.688 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:00:21.688 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:21.688 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 21:00:21.688 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:00:21.688 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:21.688 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:21.688 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:00:21.688 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 21:00:21.688 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:21.698 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:00:21.738 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 43 ms.
17-03-17 21:00:21.738 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 21:00:21.778 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-17 21:00:21.778 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-17 21:00:21.778 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 21:00:21.778 -07 000000480 INF: FPGA: Recv EMCUR 
17-03-17 21:00:21.788 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:21.788 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-17 21:00:21.838 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:21.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:22.288 -07 000000480 INF: FPGA: Recv EMIN
17-03-17 21:00:22.288 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 21:00:22.288 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-17 21:00:22.288 -07 000000476 INF: FPGA: Recv EMCUR 
17-03-17 21:00:22.298 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:22.298 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:00:22.298 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83203125, Z-Position -0.16605089403619. ------
17-03-17 21:00:22.298 -07 000000431 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:22.298 -07 000000433 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.14037 mm
17-03-17 21:00:22.298 -07 000000433 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:22.298 -07 000000012 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:22.298 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 30663, sync = True, waitForSettling = False)
17-03-17 21:00:22.298 -07 000000476 INF: Z Motor: Moving to -0.140366 mm, started at -0.166051 mm, distance = 25.68 um
17-03-17 21:00:22.298 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 21:00:22.308 -07 000000476 INF: FPGA: Xmit ZDACW 30663\n [Z Motor]
17-03-17 21:00:22.308 -07 000000626 INF: Y Motor: Moving to 59.9126 mm, started at 74.8320 mm, delta = -14.9194 mm
17-03-17 21:00:22.308 -07 000000431 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:22.308 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 21:00:22.318 -07 000000431 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:00:22.318 -07 000000476 INF: FPGA: 'ZDACW 30663' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:22.328 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:22.328 -07 000000618 INF: FPGA: Recv YRDPOS 153258
17-03-17 21:00:22.338 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:22.338 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:00:22.338 -07 000000626 INF: Y Motor: Encoder = 153258 = motor step 119732.8 = 74.8330 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:22.338 -07 000000627 INF: FPGA: Recv ZDACR 30663
17-03-17 21:00:22.338 -07 000000626 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-17 21:00:22.338 -07 000000626 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 21:00:22.348 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:00:22.348 -07 000000476 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-17 21:00:22.348 -07 000000626 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 21:00:22.518 -07 000000476 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:00:22.518 -07 000000431 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 211 ms overall
17-03-17 21:00:23.978 -07 000000458 INF: FPGA: Recv YMVTO 122703 23904
17-03-17 21:00:23.978 -07 000000626 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1621 ms to get response, and 1637 ms overall
17-03-17 21:00:23.978 -07 000000626 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 21:00:23.978 -07 000000626 INF: Y Motor: To move from 74.833 to 59.913 (-14.919 mm) should take 23873 steps, but required 23904 steps (14.940 mm). Slippage = 0.019 mm (0.00%).
17-03-17 21:00:23.978 -07 000000626 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1637 ms, distance = 14.919 mm, average velocity = 9.114 mm/sec
17-03-17 21:00:26.128 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.009895,
17-03-17 21:00:26.828 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:26.828 -07 000000476 INF: FPGA: Recv YRDPOS 122698
17-03-17 21:00:26.838 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.838 -07 000000626 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:26.838 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:26.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:26.868 -07 000000626 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:26.868 -07 000000626 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-17 21:00:26.868 -07 000000626 INF: Y Motor: Moved to 59.9111 after 4560 ms
17-03-17 21:00:26.868 -07 000000433 INF: Z Motor: EndOfMoveAbsStepped: target = -0.140366 mm (DAC = 30663)
17-03-17 21:00:26.868 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.868 -07 000000512 INF: FPGA: Recv ZSGSRD 31144
17-03-17 21:00:26.878 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:26.878 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.878 -07 000000626 INF: FPGA: Recv ZSGSRD 31142
17-03-17 21:00:26.888 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.888 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.888 -07 000000512 INF: FPGA: Recv ZSGSRD 31138
17-03-17 21:00:26.898 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.898 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.898 -07 000000480 INF: FPGA: Recv ZSGSRD 31134
17-03-17 21:00:26.908 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:26.908 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.908 -07 000000569 INF: FPGA: Recv ZSGSRD 31142
17-03-17 21:00:26.918 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.918 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.918 -07 000000618 INF: FPGA: Recv ZSGSRD 31141
17-03-17 21:00:26.928 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.928 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.928 -07 000000458 INF: FPGA: Recv ZSGSRD 31141
17-03-17 21:00:26.938 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.938 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.938 -07 000000618 INF: FPGA: Recv ZSGSRD 31140
17-03-17 21:00:26.948 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.948 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.948 -07 000000569 INF: FPGA: Recv ZSGSRD 31135
17-03-17 21:00:26.958 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.958 -07 000000433 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:26.958 -07 000000480 INF: FPGA: Recv ZSGSRD 31143
17-03-17 21:00:26.968 -07 000000433 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.968 -07 000000433 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:26.968 -07 000000458 INF: FPGA: Recv ZPIEZORD 26844
17-03-17 21:00:26.978 -07 000000433 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:26.978 -07 000000433 INF: Z Motor: Piezo is near 37.3 V (nominally 0 to 100 V), expect near 46.8 V, since DAC is at 4.679 V. Piezo Error = -9.4 V.
17-03-17 21:00:26.978 -07 000000433 INF: Z Motor: ReadAdcAverage: Commanded Z = -140.4 um, Read 10 ADC samples: Avg = 31140 (-139.6 uncal um), Error = 0.8 uncal um, Median = 31141 (-139.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 31134 (-139.5 uncal um), Max = 31144 (-139.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:26.978 -07 000000433 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31140, posNoise = 4, negNoise = 6
17-03-17 21:00:26.978 -07 000000433 INF: Z Motor: After move to -0.140366, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:26.978 -07 000000433 INF: Z Motor: Settle wait time = 4564 ms, measure time = 106 ms (allowed 150 ms), total time = 4670 ms
17-03-17 21:00:26.978 -07 000000433 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:27.028 -07 000000433 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4724 ms
17-03-17 21:00:27.028 -07 000000433 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:27.028 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:27.028 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:27.028 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:27.028 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:27.028 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:00:27.028 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:27.028 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:00:27.028 -07 000000458 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 21:00:27.058 -07 000000458 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 21:00:27.058 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:00:27.058 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 21:00:27.058 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:00:27.068 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 21:00:27.068 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-17 21:00:27.078 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:00:27.118 -07 000000569 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:00:27.318 -07 000000431 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:00:27.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:00:27.318 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:00:27.318 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-17 21:00:27.358 -07 000000480 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:00:27.358 -07 000000569 INF: FPGA: Recv CAMSNAP
17-03-17 21:00:27.358 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 275 ms to get response, and 285 ms overall
17-03-17 21:00:27.438 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 119 ms.
17-03-17 21:00:27.438 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:27.438 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:00:27.438 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 122 ms.
17-03-17 21:00:27.458 -07 000000433 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:27.458 -07 000000382 INF: Image SNR check: start
17-03-17 21:00:27.458 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:27.468 -07 000000433 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:27.468 -07 000000433 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:00:27.478 -07 000000382 INF: Image SNR check: pass  [peak (Max-Min)=62.74]
17-03-17 21:00:27.478 -07 000000382 INF: Autofocus start
17-03-17 21:00:27.478 -07 000000382 INF: MeasureProfile start
17-03-17 21:00:27.488 -07 000000382 INF: MeasureProfile done
17-03-17 21:00:27.488 -07 000000382 INF: X=16  Z correction [um]=0.0530179
17-03-17 21:00:27.488 -07 000000382 INF: Autofocus finished
17-03-17 21:00:27.668 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:00:27.668 -07 000000433 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:00:27.668 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.140373318105571. ----------
17-03-17 21:00:27.678 -07 000000610 INF: Cycle	45	Tile	1	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:27.678 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29187, sync = True, waitForSettling = True)
17-03-17 21:00:27.678 -07 000000610 INF: Z Motor: Moving to -0.133610 mm, started at -0.140373 mm, distance = 6.76 um
17-03-17 21:00:27.678 -07 000000610 INF: FPGA: Xmit ZDACW 29187\n [Z Motor]
17-03-17 21:00:27.678 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:00:27.688 -07 000000610 INF: FPGA: 'ZDACW 29187' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:27.688 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:27.688 -07 000000433 INF: FPGA: Recv ZDACR 29187
17-03-17 21:00:27.698 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.698 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:27.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.848 -07 000000382 INF: FPGA: Recv ZSGSRD 30089
17-03-17 21:00:27.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.858 -07 000000618 INF: FPGA: Recv ZSGSRD 30088
17-03-17 21:00:27.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.868 -07 000000382 INF: FPGA: Recv ZSGSRD 30089
17-03-17 21:00:27.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.878 -07 000000433 INF: FPGA: Recv ZSGSRD 30082
17-03-17 21:00:27.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.888 -07 000000569 INF: FPGA: Recv ZSGSRD 30085
17-03-17 21:00:27.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.898 -07 000000618 INF: FPGA: Recv ZSGSRD 30095
17-03-17 21:00:27.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.908 -07 000000626 INF: FPGA: Recv ZSGSRD 30086
17-03-17 21:00:27.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.918 -07 000000433 INF: FPGA: Recv ZSGSRD 30085
17-03-17 21:00:27.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.928 -07 000000480 INF: FPGA: Recv ZSGSRD 30084
17-03-17 21:00:27.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:27.938 -07 000000433 INF: FPGA: Recv ZSGSRD 30090
17-03-17 21:00:27.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.948 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:27.948 -07 000000382 INF: FPGA: Recv ZPIEZORD 25697
17-03-17 21:00:27.958 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:27.958 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.454 V. Piezo Error = -9.6 V.
17-03-17 21:00:27.958 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.6 um, Read 10 ADC samples: Avg = 30087 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30087 (-132.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30082 (-132.8 uncal um), Max = 30095 (-132.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:00:27.958 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30087, posNoise = 8, negNoise = 5
17-03-17 21:00:27.958 -07 000000610 INF: Z Motor: After move to -0.133610, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:27.958 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:00:27.958 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:27.958 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:27.958 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:27.958 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:27.958 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:27.958 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:27.958 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:27.958 -07 000000476 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:27.958 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:27.958 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:27.958 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:27.958 -07 000000382 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 21:00:27.968 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:00:27.968 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:27.978 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:00:27.978 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:27.978 -07 000000382 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-17 21:00:27.978 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:27.988 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:00:27.988 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:27.998 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:00:27.998 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 33 ms.
17-03-17 21:00:27.998 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 29364 150\n [Camera]
17-03-17 21:00:28.198 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:28.618 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:28.618 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:28.618 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:28.618 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:28.618 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:00:28.618 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:28.618 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:28.618 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:28.618 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:28.618 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:00:28.808 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29364 808
17-03-17 21:00:28.958 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:28.998 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:00:28.998 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:00:28.998 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:28.998 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:00:28.998 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:28.998 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:29.008 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:29.008 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:29.008 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:00:29.008 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:00:29.168 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:29.168 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:29.168 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:29.168 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:29.168 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-17 21:00:29.168 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:29.168 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:29.168 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:29.168 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:29.168 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-17 21:00:29.358 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:29.358 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:29.358 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 29364 150' command took 2 ms to send, 1353 ms to get response, and 1361 ms overall
17-03-17 21:00:29.358 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.134100
17-03-17 21:00:29.358 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13410 mm
17-03-17 21:00:29.358 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:29.358 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 21:00:29.358 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 29294, sync = True, waitForSettling = False)
17-03-17 21:00:29.358 -07 000000569 INF: Z Motor: Moving to -0.134099 mm, started at -0.133609 mm, distance = -0.49 um
17-03-17 21:00:29.358 -07 000000569 INF: FPGA: Xmit ZDACW 29294\n [Z Motor]
17-03-17 21:00:29.358 -07 000000382 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-17 21:00:29.368 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 21:00:29.368 -07 000000569 INF: FPGA: 'ZDACW 29294' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:00:29.368 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:29.368 -07 000000618 INF: FPGA: Recv ZDACR 29294
17-03-17 21:00:29.378 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:29.378 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:29.378 -07 000000569 INF: Z Motor: MoveAbsStepped took 12 ms (did NOT wait for settling yet))
17-03-17 21:00:29.508 -07 000000480 INF: FPGA: Recv YRDPOS 122698
17-03-17 21:00:29.508 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 142 ms overall
17-03-17 21:00:29.508 -07 000000382 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:29.508 -07 000000382 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:29.508 -07 000000382 INF: Y Motor: Moving 1330 steps2
17-03-17 21:00:29.508 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:29.568 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 399 ms.
17-03-17 21:00:29.568 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:00:29.568 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:29.568 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 401 ms.
17-03-17 21:00:29.568 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 21:00:29.568 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:29.568 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:29.578 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:29.578 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-17 21:00:29.578 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-17 21:00:29.888 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:00:29.888 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall
17-03-17 21:00:29.918 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:29.918 -07 000000618 INF: FPGA: Recv YRDPOS 124381
17-03-17 21:00:29.928 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:29.928 -07 000000382 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:29.928 -07 000000382 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 21:00:29.928 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.831 mm, average velocity = 2.200 mm/sec
17-03-17 21:00:30.878 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:30.878 -07 000000438 INF: FPGA: Recv YRDPOS 124382
17-03-17 21:00:30.888 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:30.888 -07 000000382 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:30.908 -07 000000382 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:30.908 -07 000000382 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:00:30.908 -07 000000382 INF: Y Motor: Moved to 60.7334 after 1546 ms (table move)
17-03-17 21:00:30.908 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134099 mm (DAC = 29294)
17-03-17 21:00:30.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.908 -07 000000438 INF: FPGA: Recv ZSGSRD 30168
17-03-17 21:00:30.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:30.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.918 -07 000000627 INF: FPGA: Recv ZSGSRD 30165
17-03-17 21:00:30.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.928 -07 000000382 INF: FPGA: Recv ZSGSRD 30167
17-03-17 21:00:30.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.938 -07 000000433 INF: FPGA: Recv ZSGSRD 30160
17-03-17 21:00:30.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.948 -07 000000012 INF: FPGA: Recv ZSGSRD 30163
17-03-17 21:00:30.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.958 -07 000000382 INF: FPGA: Recv ZSGSRD 30163
17-03-17 21:00:30.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.968 -07 000000012 INF: FPGA: Recv ZSGSRD 30160
17-03-17 21:00:30.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.978 -07 000000458 INF: FPGA: Recv ZSGSRD 30166
17-03-17 21:00:30.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.988 -07 000000438 INF: FPGA: Recv ZSGSRD 30170
17-03-17 21:00:30.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:30.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:30.998 -07 000000382 INF: FPGA: Recv ZSGSRD 30165
17-03-17 21:00:31.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.008 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:31.008 -07 000000438 INF: FPGA: Recv ZPIEZORD 25904
17-03-17 21:00:31.018 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.018 -07 000000610 INF: Z Motor: Piezo is near 35.3 V (nominally 0 to 100 V), expect near 44.7 V, since DAC is at 4.470 V. Piezo Error = -9.4 V.
17-03-17 21:00:31.018 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.1 um, Read 10 ADC samples: Avg = 30165 (-133.3 uncal um), Error = 0.8 uncal um, Median = 30165 (-133.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30160 (-133.3 uncal um), Max = 30170 (-133.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:00:31.018 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30165, posNoise = 5, negNoise = 5
17-03-17 21:00:31.018 -07 000000610 INF: Z Motor: After move to -0.134099, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:31.018 -07 000000610 INF: Z Motor: Settle wait time = 1548 ms, measure time = 104 ms (allowed 150 ms), total time = 1652 ms
17-03-17 21:00:31.018 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:31.068 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1704 ms
17-03-17 21:00:31.068 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:31.068 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.134109711267354. ----------
17-03-17 21:00:31.068 -07 000000610 INF: Cycle	45	Tile	2	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:31.068 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29117, sync = True, waitForSettling = True)
17-03-17 21:00:31.068 -07 000000610 INF: Z Motor: Moving to -0.133289 mm, started at -0.134110 mm, distance = 0.82 um
17-03-17 21:00:31.068 -07 000000610 INF: FPGA: Xmit ZDACW 29117\n [Z Motor]
17-03-17 21:00:31.068 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:00:31.078 -07 000000610 INF: FPGA: 'ZDACW 29117' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:00:31.078 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:31.078 -07 000000627 INF: FPGA: Recv ZDACR 29117
17-03-17 21:00:31.088 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.088 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:31.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.238 -07 000000382 INF: FPGA: Recv ZSGSRD 30036
17-03-17 21:00:31.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.248 -07 000000627 INF: FPGA: Recv ZSGSRD 30040
17-03-17 21:00:31.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.258 -07 000000458 INF: FPGA: Recv ZSGSRD 30037
17-03-17 21:00:31.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.268 -07 000000576 INF: FPGA: Recv ZSGSRD 30033
17-03-17 21:00:31.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.278 -07 000000458 INF: FPGA: Recv ZSGSRD 30035
17-03-17 21:00:31.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:31.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.288 -07 000000012 INF: FPGA: Recv ZSGSRD 30043
17-03-17 21:00:31.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.298 -07 000000576 INF: FPGA: Recv ZSGSRD 30045
17-03-17 21:00:31.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.308 -07 000000458 INF: FPGA: Recv ZSGSRD 30035
17-03-17 21:00:31.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.318 -07 000000012 INF: FPGA: Recv ZSGSRD 30038
17-03-17 21:00:31.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:31.328 -07 000000576 INF: FPGA: Recv ZSGSRD 30036
17-03-17 21:00:31.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.338 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:31.338 -07 000000480 INF: FPGA: Recv ZPIEZORD 25730
17-03-17 21:00:31.348 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:31.348 -07 000000610 INF: Z Motor: Piezo is near 35.0 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.443 V. Piezo Error = -9.5 V.
17-03-17 21:00:31.348 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.3 um, Read 10 ADC samples: Avg = 30038 (-132.5 uncal um), Error = 0.8 uncal um, Median = 30036 (-132.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30033 (-132.5 uncal um), Max = 30045 (-132.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:00:31.348 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30038, posNoise = 7, negNoise = 5
17-03-17 21:00:31.348 -07 000000610 INF: Z Motor: After move to -0.133289, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:31.348 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:00:31.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:31.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:31.348 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:31.348 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:31.348 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:31.348 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:31.348 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:31.348 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:31.348 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:31.348 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:31.348 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:31.348 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:31.358 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:31.358 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:31.358 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:31.358 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:31.368 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:00:31.368 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:00:31.368 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:00:31.368 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:31.368 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 29294 150\n [Camera]
17-03-17 21:00:31.498 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.003063,
17-03-17 21:00:31.568 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:31.838 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:31.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:31.988 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:31.988 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:31.988 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:31.988 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:31.988 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:31.988 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:31.998 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:31.998 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:00:31.998 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:31.998 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:00:32.178 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29294 808
17-03-17 21:00:32.328 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:32.388 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 397 ms.
17-03-17 21:00:32.388 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:00:32.398 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:32.398 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 396 ms.
17-03-17 21:00:32.398 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:00:32.398 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:32.398 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:32.398 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-17 21:00:32.398 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:32.408 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-17 21:00:32.538 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:32.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:32.538 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:32.538 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:32.538 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:00:32.538 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:32.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:32.538 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:32.538 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:32.538 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:00:32.728 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:32.728 -07 000000627 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:32.728 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 29294 150' command took 2 ms to send, 1353 ms to get response, and 1361 ms overall
17-03-17 21:00:32.728 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133689
17-03-17 21:00:32.728 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13369 mm
17-03-17 21:00:32.728 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:32.728 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 21:00:32.728 -07 000000502 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-17 21:00:32.728 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:32.738 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 29204, sync = True, waitForSettling = False)
17-03-17 21:00:32.738 -07 000000382 INF: Z Motor: Moving to -0.133687 mm, started at -0.133294 mm, distance = -0.39 um
17-03-17 21:00:32.738 -07 000000382 INF: FPGA: Xmit ZDACW 29204\n [Z Motor]
17-03-17 21:00:32.738 -07 000000627 INF: FPGA: Recv YRDPOS 124382
17-03-17 21:00:32.738 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:00:32.738 -07 000000502 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:32.738 -07 000000502 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:32.738 -07 000000502 INF: Y Motor: Moving 1343 steps-20
17-03-17 21:00:32.738 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:00:32.748 -07 000000382 INF: FPGA: 'ZDACW 29204' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:32.748 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:32.748 -07 000000627 INF: FPGA: Recv ZDACR 29204
17-03-17 21:00:32.758 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:32.758 -07 000000382 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-17 21:00:32.758 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:32.918 -07 000000433 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:00:32.918 -07 000000433 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:00:32.918 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:32.928 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:32.928 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 395 ms.
17-03-17 21:00:32.928 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:00:32.928 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:32.928 -07 000000433 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:00:32.938 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:32.938 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 21:00:33.128 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 21:00:33.128 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 21:00:33.168 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:33.168 -07 000000480 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:00:33.178 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:33.178 -07 000000502 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:33.178 -07 000000502 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 21:00:33.178 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.839 mm, average velocity = 2.125 mm/sec
17-03-17 21:00:34.128 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:34.128 -07 000000618 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:00:34.138 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:34.138 -07 000000502 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:34.158 -07 000000502 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:34.158 -07 000000502 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:34.158 -07 000000502 INF: Y Motor: Moved to 61.5640 after 1424 ms (table move)
17-03-17 21:00:34.158 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133687 mm (DAC = 29204)
17-03-17 21:00:34.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.158 -07 000000618 INF: FPGA: Recv ZSGSRD 30095
17-03-17 21:00:34.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:34.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.168 -07 000000012 INF: FPGA: Recv ZSGSRD 30092
17-03-17 21:00:34.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.178 -07 000000618 INF: FPGA: Recv ZSGSRD 30093
17-03-17 21:00:34.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.188 -07 000000502 INF: FPGA: Recv ZSGSRD 30105
17-03-17 21:00:34.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.198 -07 000000382 INF: FPGA: Recv ZSGSRD 30107
17-03-17 21:00:34.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.208 -07 000000480 INF: FPGA: Recv ZSGSRD 30096
17-03-17 21:00:34.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.218 -07 000000012 INF: FPGA: Recv ZSGSRD 30098
17-03-17 21:00:34.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.228 -07 000000480 INF: FPGA: Recv ZSGSRD 30094
17-03-17 21:00:34.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.238 -07 000000382 INF: FPGA: Recv ZSGSRD 30098
17-03-17 21:00:34.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.248 -07 000000502 INF: FPGA: Recv ZSGSRD 30102
17-03-17 21:00:34.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:34.258 -07 000000480 INF: FPGA: Recv ZPIEZORD 25819
17-03-17 21:00:34.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.268 -07 000000610 INF: Z Motor: Piezo is near 35.2 V (nominally 0 to 100 V), expect near 44.6 V, since DAC is at 4.456 V. Piezo Error = -9.4 V.
17-03-17 21:00:34.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.7 um, Read 10 ADC samples: Avg = 30098 (-132.9 uncal um), Error = 0.8 uncal um, Median = 30097 (-132.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30092 (-132.9 uncal um), Max = 30107 (-132.9 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:34.268 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30098, posNoise = 9, negNoise = 6
17-03-17 21:00:34.268 -07 000000610 INF: Z Motor: After move to -0.133687, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:34.268 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 105 ms (allowed 150 ms), total time = 1529 ms
17-03-17 21:00:34.268 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:34.318 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1584 ms
17-03-17 21:00:34.318 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:34.318 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133679289053856. ----------
17-03-17 21:00:34.318 -07 000000610 INF: Cycle	45	Tile	3	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:34.318 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29028, sync = True, waitForSettling = True)
17-03-17 21:00:34.318 -07 000000610 INF: Z Motor: Moving to -0.132882 mm, started at -0.133679 mm, distance = 0.80 um
17-03-17 21:00:34.318 -07 000000610 INF: FPGA: Xmit ZDACW 29028\n [Z Motor]
17-03-17 21:00:34.318 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:00:34.328 -07 000000610 INF: FPGA: 'ZDACW 29028' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:34.328 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:34.328 -07 000000012 INF: FPGA: Recv ZDACR 29028
17-03-17 21:00:34.338 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.338 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:34.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.488 -07 000000502 INF: FPGA: Recv ZSGSRD 29981
17-03-17 21:00:34.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:34.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.498 -07 000000012 INF: FPGA: Recv ZSGSRD 29975
17-03-17 21:00:34.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.508 -07 000000480 INF: FPGA: Recv ZSGSRD 29979
17-03-17 21:00:34.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.518 -07 000000502 INF: FPGA: Recv ZSGSRD 29979
17-03-17 21:00:34.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.528 -07 000000480 INF: FPGA: Recv ZSGSRD 29975
17-03-17 21:00:34.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.538 -07 000000012 INF: FPGA: Recv ZSGSRD 29966
17-03-17 21:00:34.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.548 -07 000000502 INF: FPGA: Recv ZSGSRD 29970
17-03-17 21:00:34.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.558 -07 000000382 INF: FPGA: Recv ZSGSRD 29975
17-03-17 21:00:34.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.568 -07 000000502 INF: FPGA: Recv ZSGSRD 29975
17-03-17 21:00:34.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:34.578 -07 000000382 INF: FPGA: Recv ZSGSRD 29965
17-03-17 21:00:34.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.588 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:34.588 -07 000000502 INF: FPGA: Recv ZPIEZORD 25663
17-03-17 21:00:34.598 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:34.598 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.429 V. Piezo Error = -9.5 V.
17-03-17 21:00:34.598 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.9 um, Read 10 ADC samples: Avg = 29974 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29975 (-132.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29965 (-132.0 uncal um), Max = 29981 (-132.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:00:34.598 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29974, posNoise = 7, negNoise = 9
17-03-17 21:00:34.598 -07 000000610 INF: Z Motor: After move to -0.132882, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:34.598 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:00:34.598 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:34.598 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:34.598 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:34.598 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:34.598 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:34.598 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:34.598 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:34.598 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:34.598 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:34.598 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:34.598 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:00:34.598 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:34.608 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:34.608 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:34.608 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:34.608 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:34.618 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:34.618 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:00:34.618 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:34.618 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:00:34.618 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 29204 150\n [Camera]
17-03-17 21:00:34.818 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:35.248 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:35.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:35.248 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:35.248 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:35.248 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:00:35.248 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:35.248 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:35.248 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:35.368 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:35.368 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:00:35.438 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29204 808
17-03-17 21:00:35.588 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:35.628 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:00:35.628 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:35.628 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:35.638 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:35.638 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:00:35.748 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:00:35.748 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:00:35.748 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:35.748 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:35.758 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms.
17-03-17 21:00:35.788 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:35.788 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:35.788 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:35.798 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:35.798 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:35.798 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:35.798 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:35.798 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:35.798 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:35.798 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:00:35.978 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:35.988 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:35.988 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 29204 150' command took 2 ms to send, 1349 ms to get response, and 1360 ms overall
17-03-17 21:00:35.988 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:00:35.988 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.132882686748278. ------
17-03-17 21:00:35.988 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:35.988 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13925 mm
17-03-17 21:00:35.988 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:35.988 -07 000000433 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:35.998 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:35.998 -07 000000547 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:00:35.998 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 21:00:35.998 -07 000000512 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-17 21:00:35.998 -07 000000433 INF: Z Motor: Entering MoveAbsStepped (DAC = 30418, sync = True, waitForSettling = False)
17-03-17 21:00:35.998 -07 000000433 INF: Z Motor: Moving to -0.139245 mm, started at -0.132883 mm, distance = -6.36 um
17-03-17 21:00:36.008 -07 000000433 INF: FPGA: Xmit ZDACW 30418\n [Z Motor]
17-03-17 21:00:36.008 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:00:36.018 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:36.018 -07 000000433 INF: FPGA: 'ZDACW 30418' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:00:36.018 -07 000000480 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:00:36.028 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:00:36.028 -07 000000512 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:36.028 -07 000000512 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:36.028 -07 000000512 INF: Y Motor: Moving 1342 steps-18
17-03-17 21:00:36.028 -07 000000433 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:36.028 -07 000000627 INF: FPGA: Recv ZDACR 30418
17-03-17 21:00:36.038 -07 000000433 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:00:36.038 -07 000000433 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-17 21:00:36.038 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:36.178 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:00:36.178 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:00:36.178 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:36.178 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:00:36.178 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:00:36.178 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:36.178 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:36.178 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:00:36.178 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:36.188 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:00:36.198 -07 000000431 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:00:36.198 -07 000000547 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:00:36.408 -07 000000547 INF: FPGA: Recv YMVTILE
17-03-17 21:00:36.408 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:00:36.448 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:36.448 -07 000000627 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:00:36.458 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:36.458 -07 000000512 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:36.458 -07 000000512 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:00:36.458 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.161 mm/sec
17-03-17 21:00:36.838 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:36.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:36.868 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.990831,
17-03-17 21:00:37.408 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:37.408 -07 000000012 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:00:37.418 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:37.418 -07 000000512 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:37.438 -07 000000512 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:37.438 -07 000000512 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:37.438 -07 000000512 INF: Y Motor: Moved to 62.3955 after 1440 ms (table move)
17-03-17 21:00:37.438 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139245 mm (DAC = 30418)
17-03-17 21:00:37.438 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.438 -07 000000512 INF: FPGA: Recv ZSGSRD 30971
17-03-17 21:00:37.448 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:37.448 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.448 -07 000000627 INF: FPGA: Recv ZSGSRD 30963
17-03-17 21:00:37.458 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.458 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.458 -07 000000431 INF: FPGA: Recv ZSGSRD 30963
17-03-17 21:00:37.468 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.468 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.468 -07 000000480 INF: FPGA: Recv ZSGSRD 30968
17-03-17 21:00:37.478 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.478 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.478 -07 000000431 INF: FPGA: Recv ZSGSRD 30958
17-03-17 21:00:37.488 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.488 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.488 -07 000000431 INF: FPGA: Recv ZSGSRD 30961
17-03-17 21:00:37.498 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.498 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.498 -07 000000433 INF: FPGA: Recv ZSGSRD 30963
17-03-17 21:00:37.508 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.508 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.508 -07 000000433 INF: FPGA: Recv ZSGSRD 30970
17-03-17 21:00:37.518 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.518 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.518 -07 000000626 INF: FPGA: Recv ZSGSRD 30961
17-03-17 21:00:37.528 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.528 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:37.528 -07 000000547 INF: FPGA: Recv ZSGSRD 30967
17-03-17 21:00:37.538 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.538 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:37.538 -07 000000547 INF: FPGA: Recv ZPIEZORD 26997
17-03-17 21:00:37.548 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:37.548 -07 000000502 INF: Z Motor: Piezo is near 37.7 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.641 V. Piezo Error = -8.7 V.
17-03-17 21:00:37.548 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.2 um, Read 10 ADC samples: Avg = 30964 (-138.4 uncal um), Error = 0.8 uncal um, Median = 30963 (-138.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30958 (-138.4 uncal um), Max = 30971 (-138.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:37.548 -07 000000502 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30964, posNoise = 7, negNoise = 6
17-03-17 21:00:37.548 -07 000000502 INF: Z Motor: After move to -0.139245, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:37.548 -07 000000502 INF: Z Motor: Settle wait time = 1443 ms, measure time = 106 ms (allowed 150 ms), total time = 1549 ms
17-03-17 21:00:37.548 -07 000000502 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:37.598 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-17 21:00:37.598 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:37.598 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:37.598 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:37.598 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:37.598 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:00:37.598 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:37.598 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:37.598 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:37.598 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:00:37.608 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:00:37.608 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:00:37.618 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 21:00:37.618 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 21:00:37.618 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:00:37.658 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:00:37.858 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:00:37.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:00:37.868 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:00:37.868 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-17 21:00:37.898 -07 000000433 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:00:37.898 -07 000000431 INF: FPGA: Recv CAMSNAP
17-03-17 21:00:37.898 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 21:00:37.988 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 21:00:37.988 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:37.988 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:00:37.988 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:00:38.098 -07 000000433 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:38.098 -07 000000502 INF: Autofocus start
17-03-17 21:00:38.098 -07 000000502 INF: MeasureProfile start
17-03-17 21:00:38.098 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:38.108 -07 000000433 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:38.108 -07 000000433 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:00:38.108 -07 000000502 INF: MeasureProfile done
17-03-17 21:00:38.108 -07 000000502 INF: X=0  Z correction [um]=-0.02394831
17-03-17 21:00:38.108 -07 000000502 INF: Autofocus finished
17-03-17 21:00:38.308 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:00:38.308 -07 000000433 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:00:38.308 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.139242656768621. ----------
17-03-17 21:00:38.308 -07 000000610 INF: Cycle	45	Tile	4	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:38.318 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28926, sync = True, waitForSettling = True)
17-03-17 21:00:38.318 -07 000000610 INF: Z Motor: Moving to -0.132415 mm, started at -0.139243 mm, distance = 6.83 um
17-03-17 21:00:38.318 -07 000000610 INF: FPGA: Xmit ZDACW 28926\n [Z Motor]
17-03-17 21:00:38.318 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 21:00:38.328 -07 000000610 INF: FPGA: 'ZDACW 28926' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:38.328 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:38.328 -07 000000431 INF: FPGA: Recv ZDACR 28926
17-03-17 21:00:38.338 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.338 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:38.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.488 -07 000000433 INF: FPGA: Recv ZSGSRD 29904
17-03-17 21:00:38.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:38.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.498 -07 000000431 INF: FPGA: Recv ZSGSRD 29910
17-03-17 21:00:38.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.508 -07 000000626 INF: FPGA: Recv ZSGSRD 29901
17-03-17 21:00:38.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.518 -07 000000431 INF: FPGA: Recv ZSGSRD 29899
17-03-17 21:00:38.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.528 -07 000000512 INF: FPGA: Recv ZSGSRD 29909
17-03-17 21:00:38.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.538 -07 000000502 INF: FPGA: Recv ZSGSRD 29903
17-03-17 21:00:38.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.548 -07 000000512 INF: FPGA: Recv ZSGSRD 29901
17-03-17 21:00:38.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.558 -07 000000431 INF: FPGA: Recv ZSGSRD 29897
17-03-17 21:00:38.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.568 -07 000000502 INF: FPGA: Recv ZSGSRD 29901
17-03-17 21:00:38.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:38.578 -07 000000431 INF: FPGA: Recv ZSGSRD 29902
17-03-17 21:00:38.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.588 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:38.588 -07 000000512 INF: FPGA: Recv ZPIEZORD 25591
17-03-17 21:00:38.598 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:38.598 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.414 V. Piezo Error = -9.5 V.
17-03-17 21:00:38.598 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29903 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29902 (-131.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29897 (-131.6 uncal um), Max = 29910 (-131.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:38.598 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29903, posNoise = 7, negNoise = 6
17-03-17 21:00:38.598 -07 000000610 INF: Z Motor: After move to -0.132415, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:38.598 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:00:38.598 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:38.598 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:38.598 -07 000000433 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:38.598 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:38.598 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:38.598 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:38.598 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:38.598 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:38.598 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:00:38.598 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:38.598 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:38.598 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:38.608 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:38.608 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:38.608 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:38.608 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:38.618 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:00:38.618 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:00:38.618 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:00:38.618 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:00:38.618 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 29102 150\n [Camera]
17-03-17 21:00:38.818 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:39.238 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:39.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:39.248 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:39.248 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:39.248 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:39.248 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:39.248 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:39.248 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-17 21:00:39.248 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:39.248 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:00:39.428 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29102 808
17-03-17 21:00:39.578 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:39.628 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:00:39.628 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:00:39.628 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:39.628 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:00:39.628 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:00:39.628 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:39.628 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:39.628 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:39.628 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:00:39.638 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:00:39.788 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:39.788 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:39.788 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:39.928 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:39.928 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:39.928 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:39.928 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:39.928 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:00:39.938 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:39.938 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:00:39.978 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP 1357
17-03-17 21:00:39.978 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:39.978 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 29102 150' command took 2 ms to send, 1358 ms to get response, and 1364 ms overall
17-03-17 21:00:39.988 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.133079
17-03-17 21:00:39.988 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13308 mm
17-03-17 21:00:39.988 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:39.988 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 21:00:39.988 -07 000000502 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-17 21:00:39.988 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:39.988 -07 000000433 INF: Z Motor: Entering MoveAbsStepped (DAC = 29071, sync = True, waitForSettling = False)
17-03-17 21:00:39.988 -07 000000433 INF: Z Motor: Moving to -0.133079 mm, started at -0.132427 mm, distance = -0.65 um
17-03-17 21:00:39.988 -07 000000431 INF: FPGA: Recv YRDPOS 127787
17-03-17 21:00:39.998 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:39.998 -07 000000433 INF: FPGA: Xmit ZDACW 29071\n [Z Motor]
17-03-17 21:00:39.998 -07 000000502 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:39.998 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:00:39.998 -07 000000502 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:39.998 -07 000000502 INF: Y Motor: Moving 1339 steps-15
17-03-17 21:00:40.008 -07 000000433 INF: FPGA: 'ZDACW 29071' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:00:40.008 -07 000000433 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:40.008 -07 000000476 INF: FPGA: Recv ZDACR 29071
17-03-17 21:00:40.018 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:40.018 -07 000000433 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:40.018 -07 000000433 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:00:40.308 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:00:40.308 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:00:40.308 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:40.318 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:00:40.318 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:40.318 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:00:40.318 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:40.318 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:40.318 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 531 ms.
17-03-17 21:00:40.328 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:00:40.388 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-17 21:00:40.388 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-17 21:00:40.428 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:40.428 -07 000000626 INF: FPGA: Recv YRDPOS 129483
17-03-17 21:00:40.438 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:40.438 -07 000000502 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:40.438 -07 000000502 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:00:40.438 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.837 mm, average velocity = 2.119 mm/sec
17-03-17 21:00:41.388 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:41.388 -07 000000433 INF: FPGA: Recv YRDPOS 129484
17-03-17 21:00:41.398 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.398 -07 000000502 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:41.418 -07 000000502 INF: Y Motor: After move to 63.232609, error = -0.007999, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:41.418 -07 000000502 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:00:41.418 -07 000000502 INF: Y Motor: Moved to 63.2246 after 1428 ms (table move)
17-03-17 21:00:41.418 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133079 mm (DAC = 29071)
17-03-17 21:00:41.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.418 -07 000000458 INF: FPGA: Recv ZSGSRD 30001
17-03-17 21:00:41.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:41.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.428 -07 000000512 INF: FPGA: Recv ZSGSRD 30000
17-03-17 21:00:41.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.438 -07 000000502 INF: FPGA: Recv ZSGSRD 30007
17-03-17 21:00:41.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.448 -07 000000458 INF: FPGA: Recv ZSGSRD 30004
17-03-17 21:00:41.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.458 -07 000000626 INF: FPGA: Recv ZSGSRD 29995
17-03-17 21:00:41.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:41.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.468 -07 000000476 INF: FPGA: Recv ZSGSRD 30011
17-03-17 21:00:41.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.478 -07 000000576 INF: FPGA: Recv ZSGSRD 30004
17-03-17 21:00:41.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.488 -07 000000476 INF: FPGA: Recv ZSGSRD 30006
17-03-17 21:00:41.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.498 -07 000000576 INF: FPGA: Recv ZSGSRD 29999
17-03-17 21:00:41.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.508 -07 000000433 INF: FPGA: Recv ZSGSRD 30004
17-03-17 21:00:41.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:41.518 -07 000000438 INF: FPGA: Recv ZPIEZORD 25799
17-03-17 21:00:41.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.528 -07 000000610 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.436 V. Piezo Error = -9.2 V.
17-03-17 21:00:41.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30003 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30004 (-132.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29995 (-132.2 uncal um), Max = 30011 (-132.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:00:41.528 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30003, posNoise = 8, negNoise = 8
17-03-17 21:00:41.528 -07 000000610 INF: Z Motor: After move to -0.133079, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:41.528 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 105 ms (allowed 150 ms), total time = 1535 ms
17-03-17 21:00:41.528 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:41.578 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-17 21:00:41.578 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:41.578 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.224609375, Z-position -0.133068988900389. ----------
17-03-17 21:00:41.578 -07 000000610 INF: Cycle	45	Tile	5	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:41.588 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28894, sync = True, waitForSettling = True)
17-03-17 21:00:41.588 -07 000000610 INF: Z Motor: Moving to -0.132268 mm, started at -0.133069 mm, distance = 0.80 um
17-03-17 21:00:41.588 -07 000000610 INF: FPGA: Xmit ZDACW 28894\n [Z Motor]
17-03-17 21:00:41.588 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:00:41.598 -07 000000610 INF: FPGA: 'ZDACW 28894' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:00:41.598 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:41.598 -07 000000429 INF: FPGA: Recv ZDACR 28894
17-03-17 21:00:41.608 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.608 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:41.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.758 -07 000000431 INF: FPGA: Recv ZSGSRD 29879
17-03-17 21:00:41.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:41.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.768 -07 000000429 INF: FPGA: Recv ZSGSRD 29886
17-03-17 21:00:41.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.778 -07 000000476 INF: FPGA: Recv ZSGSRD 29876
17-03-17 21:00:41.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.788 -07 000000012 INF: FPGA: Recv ZSGSRD 29877
17-03-17 21:00:41.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.798 -07 000000429 INF: FPGA: Recv ZSGSRD 29877
17-03-17 21:00:41.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.808 -07 000000431 INF: FPGA: Recv ZSGSRD 29871
17-03-17 21:00:41.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.818 -07 000000429 INF: FPGA: Recv ZSGSRD 29883
17-03-17 21:00:41.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.828 -07 000000012 INF: FPGA: Recv ZSGSRD 29881
17-03-17 21:00:41.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.838 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:41.838 -07 000000576 INF: FPGA: Recv ZSGSRD 29885
17-03-17 21:00:41.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:41.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:41.848 -07 000000438 INF: FPGA: Recv ZSGSRD 29883
17-03-17 21:00:41.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.858 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:41.858 -07 000000431 INF: FPGA: Recv ZPIEZORD 25606
17-03-17 21:00:41.868 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:41.868 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.409 V. Piezo Error = -9.4 V.
17-03-17 21:00:41.868 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29880 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29880 (-131.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29871 (-131.4 uncal um), Max = 29886 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:00:41.868 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29880, posNoise = 6, negNoise = 9
17-03-17 21:00:41.868 -07 000000610 INF: Z Motor: After move to -0.132268, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:41.868 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 21:00:41.868 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:41.868 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:41.868 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:41.868 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:41.868 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:41.868 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:41.868 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:41.868 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:41.868 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:00:41.868 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:41.868 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:41.868 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:41.868 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:41.868 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:41.878 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:41.878 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:41.878 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:00:41.878 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:00:41.878 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:00:41.878 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:41.888 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 29071 150\n [Camera]
17-03-17 21:00:42.088 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:42.238 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.994908,
17-03-17 21:00:42.508 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:42.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:42.508 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:42.508 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:42.518 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:42.518 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:42.518 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:42.518 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:42.518 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:42.518 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:00:42.698 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29071 808
17-03-17 21:00:42.848 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:42.888 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:00:42.888 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 21:00:42.888 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:42.888 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:00:42.888 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:00:42.888 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:42.888 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:42.888 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:42.898 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:42.898 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:00:43.058 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:43.058 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:43.058 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:43.058 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:43.058 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:00:43.058 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:43.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:43.058 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:43.058 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:43.058 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:00:43.358 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:43.358 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:43.358 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 29071 150' command took 2 ms to send, 1461 ms to get response, and 1467 ms overall
17-03-17 21:00:43.358 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132784
17-03-17 21:00:43.358 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13278 mm
17-03-17 21:00:43.358 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:43.358 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 29007, sync = True, waitForSettling = False)
17-03-17 21:00:43.358 -07 000000429 INF: Z Motor: Moving to -0.132786 mm, started at -0.132279 mm, distance = -0.51 um
17-03-17 21:00:43.358 -07 000000429 INF: FPGA: Xmit ZDACW 29007\n [Z Motor]
17-03-17 21:00:43.358 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 21:00:43.358 -07 000000626 INF: Y Motor: Moving to 64.0626 mm, started at 63.2246 mm, delta = 0.8380 mm
17-03-17 21:00:43.358 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:00:43.368 -07 000000429 INF: FPGA: 'ZDACW 29007' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:43.368 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:43.368 -07 000000512 INF: FPGA: Recv ZDACR 29007
17-03-17 21:00:43.378 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:43.378 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:43.378 -07 000000429 INF: Z Motor: MoveAbsStepped took 13 ms (did NOT wait for settling yet))
17-03-17 21:00:43.378 -07 000000429 INF: FPGA: Recv YRDPOS 129484
17-03-17 21:00:43.388 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 21:00:43.388 -07 000000626 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:43.388 -07 000000626 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:43.388 -07 000000626 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:00:43.388 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:43.458 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 395 ms.
17-03-17 21:00:43.458 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:00:43.458 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:43.458 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 395 ms.
17-03-17 21:00:43.458 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:00:43.458 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:43.458 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:43.458 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 21:00:43.458 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:43.468 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-17 21:00:43.758 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 21:00:43.758 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-17 21:00:43.798 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:43.798 -07 000000576 INF: FPGA: Recv YRDPOS 131188
17-03-17 21:00:43.808 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:43.808 -07 000000626 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:43.808 -07 000000626 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-17 21:00:43.808 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.217 mm/sec
17-03-17 21:00:44.758 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:44.758 -07 000000576 INF: FPGA: Recv YRDPOS 131188
17-03-17 21:00:44.768 -07 000000626 INF: FPGA: 'YRDPOS' command took 5 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:44.768 -07 000000626 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:44.788 -07 000000626 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:44.788 -07 000000626 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:44.788 -07 000000626 INF: Y Motor: Moved to 64.0566 after 1424 ms (table move)
17-03-17 21:00:44.788 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132786 mm (DAC = 29007)
17-03-17 21:00:44.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.788 -07 000000576 INF: FPGA: Recv ZSGSRD 29966
17-03-17 21:00:44.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:44.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.798 -07 000000012 INF: FPGA: Recv ZSGSRD 29961
17-03-17 21:00:44.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.808 -07 000000576 INF: FPGA: Recv ZSGSRD 29959
17-03-17 21:00:44.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.818 -07 000000512 INF: FPGA: Recv ZSGSRD 29960
17-03-17 21:00:44.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.828 -07 000000012 INF: FPGA: Recv ZSGSRD 29962
17-03-17 21:00:44.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.838 -07 000000458 INF: FPGA: Recv ZSGSRD 29955
17-03-17 21:00:44.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.848 -07 000000429 INF: FPGA: Recv ZSGSRD 29954
17-03-17 21:00:44.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.858 -07 000000458 INF: FPGA: Recv ZSGSRD 29965
17-03-17 21:00:44.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.868 -07 000000429 INF: FPGA: Recv ZSGSRD 29960
17-03-17 21:00:44.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:44.878 -07 000000458 INF: FPGA: Recv ZSGSRD 29961
17-03-17 21:00:44.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.888 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:44.888 -07 000000576 INF: FPGA: Recv ZPIEZORD 25752
17-03-17 21:00:44.898 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.898 -07 000000610 INF: Z Motor: Piezo is near 35.0 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.426 V. Piezo Error = -9.2 V.
17-03-17 21:00:44.898 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29960 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29960 (-132.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29954 (-132.0 uncal um), Max = 29966 (-132.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:00:44.898 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29960, posNoise = 6, negNoise = 6
17-03-17 21:00:44.898 -07 000000610 INF: Z Motor: After move to -0.132786, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:44.898 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 106 ms (allowed 150 ms), total time = 1534 ms
17-03-17 21:00:44.898 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:44.948 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:00:44.948 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:44.948 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.132792747778293. ----------
17-03-17 21:00:44.948 -07 000000610 INF: Cycle	45	Tile	6	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:44.948 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28830, sync = True, waitForSettling = True)
17-03-17 21:00:44.948 -07 000000610 INF: Z Motor: Moving to -0.131975 mm, started at -0.132793 mm, distance = 0.82 um
17-03-17 21:00:44.948 -07 000000610 INF: FPGA: Xmit ZDACW 28830\n [Z Motor]
17-03-17 21:00:44.948 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:00:44.958 -07 000000610 INF: FPGA: 'ZDACW 28830' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:44.958 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:44.958 -07 000000626 INF: FPGA: Recv ZDACR 28830
17-03-17 21:00:44.968 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:44.968 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:45.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.118 -07 000000458 INF: FPGA: Recv ZSGSRD 29835
17-03-17 21:00:45.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:45.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.128 -07 000000429 INF: FPGA: Recv ZSGSRD 29833
17-03-17 21:00:45.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.138 -07 000000576 INF: FPGA: Recv ZSGSRD 29832
17-03-17 21:00:45.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.148 -07 000000012 INF: FPGA: Recv ZSGSRD 29833
17-03-17 21:00:45.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.158 -07 000000458 INF: FPGA: Recv ZSGSRD 29831
17-03-17 21:00:45.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.168 -07 000000429 INF: FPGA: Recv ZSGSRD 29833
17-03-17 21:00:45.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:45.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.178 -07 000000458 INF: FPGA: Recv ZSGSRD 29831
17-03-17 21:00:45.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.188 -07 000000626 INF: FPGA: Recv ZSGSRD 29834
17-03-17 21:00:45.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.198 -07 000000458 INF: FPGA: Recv ZSGSRD 29844
17-03-17 21:00:45.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:45.208 -07 000000512 INF: FPGA: Recv ZSGSRD 29831
17-03-17 21:00:45.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.218 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:45.218 -07 000000429 INF: FPGA: Recv ZPIEZORD 25527
17-03-17 21:00:45.228 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:45.228 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.399 V. Piezo Error = -9.5 V.
17-03-17 21:00:45.228 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29834 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29833 (-131.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29831 (-131.2 uncal um), Max = 29844 (-131.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:00:45.228 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29834, posNoise = 10, negNoise = 3
17-03-17 21:00:45.228 -07 000000610 INF: Z Motor: After move to -0.131975, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:45.228 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:00:45.228 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:45.228 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:45.228 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:45.228 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:45.228 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:45.228 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:45.228 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:45.228 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:45.228 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:45.228 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:45.228 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:45.228 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:45.238 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:45.238 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:45.238 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:00:45.238 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:45.248 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:45.248 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:00:45.248 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:45.248 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:00:45.258 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 29007 150\n [Camera]
17-03-17 21:00:45.458 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:45.878 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:45.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:45.878 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:45.878 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:45.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:45.888 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:45.888 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:45.888 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:00:45.888 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:45.888 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:00:46.068 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29007 808
17-03-17 21:00:46.218 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:46.258 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 366 ms.
17-03-17 21:00:46.258 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 366 ms.
17-03-17 21:00:46.258 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:46.258 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 21:00:46.258 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 21:00:46.258 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:46.258 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:46.268 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:46.268 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:00:46.268 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:00:46.428 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:46.428 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:46.428 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:46.428 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:46.428 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:46.428 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:46.428 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:46.428 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:00:46.428 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:46.428 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:00:46.618 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:46.618 -07 000000012 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:46.618 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 29007 150' command took 2 ms to send, 1352 ms to get response, and 1361 ms overall
17-03-17 21:00:46.618 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.132611
17-03-17 21:00:46.618 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13261 mm
17-03-17 21:00:46.618 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:46.618 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 21:00:46.618 -07 000000576 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-17 21:00:46.618 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 28969, sync = True, waitForSettling = False)
17-03-17 21:00:46.618 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:46.618 -07 000000458 INF: Z Motor: Moving to -0.132612 mm, started at -0.131983 mm, distance = -0.63 um
17-03-17 21:00:46.618 -07 000000429 INF: FPGA: Recv YRDPOS 131189
17-03-17 21:00:46.628 -07 000000458 INF: FPGA: Xmit ZDACW 28969\n [Z Motor]
17-03-17 21:00:46.628 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:46.628 -07 000000576 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:46.628 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:00:46.628 -07 000000576 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:46.628 -07 000000576 INF: Y Motor: Moving 1337 steps-12
17-03-17 21:00:46.638 -07 000000458 INF: FPGA: 'ZDACW 28969' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:00:46.638 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:46.648 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:46.648 -07 000000569 INF: FPGA: Recv ZDACR 28969
17-03-17 21:00:46.658 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:00:46.658 -07 000000458 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-17 21:00:46.808 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:00:46.808 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:00:46.808 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:46.808 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:46.808 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:00:46.808 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:00:46.808 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:46.818 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:46.818 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:00:46.818 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:00:46.838 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:46.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:47.008 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-17 21:00:47.008 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-17 21:00:47.048 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:47.058 -07 000000458 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:00:47.058 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:00:47.058 -07 000000576 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:47.058 -07 000000576 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:00:47.058 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.836 mm, average velocity = 2.188 mm/sec
17-03-17 21:00:47.608 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.988112,
17-03-17 21:00:48.008 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:48.008 -07 000000512 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:00:48.018 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.018 -07 000000576 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:48.038 -07 000000576 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:48.038 -07 000000576 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:48.038 -07 000000576 INF: Y Motor: Moved to 64.8789 after 1417 ms (table move)
17-03-17 21:00:48.038 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132612 mm (DAC = 28969)
17-03-17 21:00:48.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.038 -07 000000569 INF: FPGA: Recv ZSGSRD 29931
17-03-17 21:00:48.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:48.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.048 -07 000000576 INF: FPGA: Recv ZSGSRD 29932
17-03-17 21:00:48.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.058 -07 000000627 INF: FPGA: Recv ZSGSRD 29935
17-03-17 21:00:48.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.068 -07 000000576 INF: FPGA: Recv ZSGSRD 29937
17-03-17 21:00:48.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.078 -07 000000627 INF: FPGA: Recv ZSGSRD 29935
17-03-17 21:00:48.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.088 -07 000000458 INF: FPGA: Recv ZSGSRD 29937
17-03-17 21:00:48.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.098 -07 000000627 INF: FPGA: Recv ZSGSRD 29936
17-03-17 21:00:48.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.108 -07 000000458 INF: FPGA: Recv ZSGSRD 29925
17-03-17 21:00:48.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.118 -07 000000627 INF: FPGA: Recv ZSGSRD 29928
17-03-17 21:00:48.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.128 -07 000000458 INF: FPGA: Recv ZSGSRD 29932
17-03-17 21:00:48.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.138 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:48.138 -07 000000012 INF: FPGA: Recv ZPIEZORD 25708
17-03-17 21:00:48.148 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.148 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.420 V. Piezo Error = -9.3 V.
17-03-17 21:00:48.148 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29933 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29934 (-131.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29925 (-131.8 uncal um), Max = 29937 (-131.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:00:48.148 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29933, posNoise = 4, negNoise = 8
17-03-17 21:00:48.148 -07 000000610 INF: Z Motor: After move to -0.132612, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:48.148 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 104 ms (allowed 150 ms), total time = 1523 ms
17-03-17 21:00:48.148 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:48.198 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms
17-03-17 21:00:48.198 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:48.198 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.132619294050466. ----------
17-03-17 21:00:48.198 -07 000000610 INF: Cycle	45	Tile	7	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:48.198 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28792, sync = True, waitForSettling = True)
17-03-17 21:00:48.198 -07 000000610 INF: Z Motor: Moving to -0.131801 mm, started at -0.132619 mm, distance = 0.82 um
17-03-17 21:00:48.198 -07 000000610 INF: FPGA: Xmit ZDACW 28792\n [Z Motor]
17-03-17 21:00:48.198 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:00:48.208 -07 000000610 INF: FPGA: 'ZDACW 28792' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:48.208 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:48.208 -07 000000512 INF: FPGA: Recv ZDACR 28792
17-03-17 21:00:48.218 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.218 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:48.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.368 -07 000000458 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:00:48.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:48.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.378 -07 000000512 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:00:48.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.388 -07 000000458 INF: FPGA: Recv ZSGSRD 29810
17-03-17 21:00:48.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.398 -07 000000569 INF: FPGA: Recv ZSGSRD 29808
17-03-17 21:00:48.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.408 -07 000000512 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:00:48.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.418 -07 000000012 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:00:48.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.428 -07 000000458 INF: FPGA: Recv ZSGSRD 29805
17-03-17 21:00:48.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.438 -07 000000576 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:00:48.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.448 -07 000000458 INF: FPGA: Recv ZSGSRD 29803
17-03-17 21:00:48.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:48.458 -07 000000569 INF: FPGA: Recv ZSGSRD 29813
17-03-17 21:00:48.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.468 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:48.468 -07 000000458 INF: FPGA: Recv ZPIEZORD 25536
17-03-17 21:00:48.478 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:48.478 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.393 V. Piezo Error = -9.4 V.
17-03-17 21:00:48.478 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29807 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29807 (-131.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29803 (-131.0 uncal um), Max = 29813 (-131.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:00:48.478 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29807, posNoise = 6, negNoise = 4
17-03-17 21:00:48.478 -07 000000610 INF: Z Motor: After move to -0.131801, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:48.478 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:00:48.478 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:48.478 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:48.478 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:48.478 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:48.478 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:48.478 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:48.478 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:48.478 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:48.478 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:48.478 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:48.478 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:48.478 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:48.488 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:48.488 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:48.488 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:00:48.488 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:48.498 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:48.498 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:00:48.498 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:48.498 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:00:48.508 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28969 150\n [Camera]
17-03-17 21:00:48.708 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:49.128 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:49.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:49.128 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:49.128 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:49.128 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:00:49.128 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:49.128 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:49.128 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:49.128 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:49.128 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:00:49.318 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28969 808
17-03-17 21:00:49.468 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:49.508 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:00:49.508 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:49.508 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:49.508 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:00:49.508 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:00:49.508 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:49.518 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:49.518 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:00:49.518 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:49.528 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:00:49.668 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:49.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:49.678 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:49.678 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:49.678 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 21:00:49.678 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:49.678 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:49.678 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:49.678 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:49.678 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:00:49.868 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:49.868 -07 000000627 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:49.868 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28969 150' command took 2 ms to send, 1351 ms to get response, and 1360 ms overall
17-03-17 21:00:49.868 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:00:49.868 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.131809843320604. ------
17-03-17 21:00:49.868 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:49.868 -07 000000480 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13839 mm
17-03-17 21:00:49.868 -07 000000480 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:49.868 -07 000000476 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:49.868 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 21:00:49.868 -07 000000627 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-17 21:00:49.868 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 30231, sync = True, waitForSettling = False)
17-03-17 21:00:49.868 -07 000000012 INF: Z Motor: Moving to -0.138389 mm, started at -0.131810 mm, distance = -6.58 um
17-03-17 21:00:49.878 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:49.878 -07 000000012 INF: FPGA: Xmit ZDACW 30231\n [Z Motor]
17-03-17 21:00:49.878 -07 000000502 INF: FPGA: Recv ZDACW
17-03-17 21:00:49.888 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:00:49.888 -07 000000012 INF: FPGA: 'ZDACW 30231' command took 3 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:49.898 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:49.898 -07 000000438 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:00:49.908 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:49.908 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-17 21:00:49.908 -07 000000627 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:49.908 -07 000000627 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:49.908 -07 000000627 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:00:49.908 -07 000000547 INF: FPGA: Recv ZDACR 30231
17-03-17 21:00:49.918 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:00:49.918 -07 000000012 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-17 21:00:49.918 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:50.048 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:00:50.058 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:00:50.058 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:50.058 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:00:50.058 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:00:50.058 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:50.058 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:50.058 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:50.058 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:00:50.068 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:00:50.088 -07 000000476 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:00:50.088 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 209 ms overall
17-03-17 21:00:50.288 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 21:00:50.288 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:00:50.328 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:50.328 -07 000000512 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:00:50.338 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:50.338 -07 000000627 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:50.338 -07 000000627 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:00:50.338 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-17 21:00:51.288 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:51.288 -07 000000502 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:00:51.298 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:51.298 -07 000000627 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:51.318 -07 000000627 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:51.318 -07 000000627 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:51.318 -07 000000627 INF: Y Motor: Moved to 65.7144 after 1447 ms (table move)
17-03-17 21:00:51.318 -07 000000480 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138389 mm (DAC = 30231)
17-03-17 21:00:51.328 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.328 -07 000000512 INF: FPGA: Recv ZSGSRD 30835
17-03-17 21:00:51.338 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:51.338 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.338 -07 000000576 INF: FPGA: Recv ZSGSRD 30836
17-03-17 21:00:51.348 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.348 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.348 -07 000000476 INF: FPGA: Recv ZSGSRD 30840
17-03-17 21:00:51.358 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.358 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.358 -07 000000458 INF: FPGA: Recv ZSGSRD 30831
17-03-17 21:00:51.368 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.368 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.368 -07 000000512 INF: FPGA: Recv ZSGSRD 30829
17-03-17 21:00:51.378 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.378 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.378 -07 000000512 INF: FPGA: Recv ZSGSRD 30832
17-03-17 21:00:51.388 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.388 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.388 -07 000000512 INF: FPGA: Recv ZSGSRD 30828
17-03-17 21:00:51.398 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.398 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.398 -07 000000458 INF: FPGA: Recv ZSGSRD 30828
17-03-17 21:00:51.408 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.408 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.408 -07 000000458 INF: FPGA: Recv ZSGSRD 30833
17-03-17 21:00:51.418 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.418 -07 000000480 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:51.418 -07 000000458 INF: FPGA: Recv ZSGSRD 30836
17-03-17 21:00:51.428 -07 000000480 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.428 -07 000000480 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:51.428 -07 000000576 INF: FPGA: Recv ZPIEZORD 26906
17-03-17 21:00:51.438 -07 000000480 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:51.438 -07 000000480 INF: Z Motor: Piezo is near 37.5 V (nominally 0 to 100 V), expect near 46.1 V, since DAC is at 4.613 V. Piezo Error = -8.7 V.
17-03-17 21:00:51.438 -07 000000480 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.4 um, Read 10 ADC samples: Avg = 30833 (-137.6 uncal um), Error = 0.8 uncal um, Median = 30832 (-137.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30828 (-137.6 uncal um), Max = 30840 (-137.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:00:51.438 -07 000000480 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30833, posNoise = 7, negNoise = 5
17-03-17 21:00:51.438 -07 000000480 INF: Z Motor: After move to -0.138389, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:51.438 -07 000000480 INF: Z Motor: Settle wait time = 1450 ms, measure time = 110 ms (allowed 150 ms), total time = 1560 ms
17-03-17 21:00:51.438 -07 000000480 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:51.478 -07 000000480 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-17 21:00:51.478 -07 000000480 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:51.478 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:51.478 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:51.478 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:51.478 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:51.478 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:00:51.478 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:51.478 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:51.478 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:00:51.488 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:00:51.488 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:00:51.498 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:00:51.498 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 21:00:51.498 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:00:51.548 -07 000000476 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:00:51.748 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:00:51.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:00:51.748 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:00:51.748 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-17 21:00:51.788 -07 000000627 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:00:51.788 -07 000000476 INF: FPGA: Recv CAMSNAP
17-03-17 21:00:51.788 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 285 ms overall
17-03-17 21:00:51.838 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:51.868 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 125 ms.
17-03-17 21:00:51.878 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:51.878 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:00:51.878 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 21:00:51.878 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:51.888 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:00:51.888 -07 000000012 INF: Autofocus start
17-03-17 21:00:51.888 -07 000000012 INF: MeasureProfile start
17-03-17 21:00:51.888 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:00:51.898 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:51.898 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:00:51.898 -07 000000012 INF: MeasureProfile done
17-03-17 21:00:51.898 -07 000000012 INF: X=32  Z correction [um]=0.1299841
17-03-17 21:00:51.898 -07 000000012 INF: Autofocus finished
17-03-17 21:00:52.098 -07 000000547 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:00:52.098 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:00:52.098 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.138401084978051. ----------
17-03-17 21:00:52.098 -07 000000610 INF: Cycle	45	Tile	8	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:52.108 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28772, sync = True, waitForSettling = True)
17-03-17 21:00:52.108 -07 000000610 INF: Z Motor: Moving to -0.131710 mm, started at -0.138401 mm, distance = 6.69 um
17-03-17 21:00:52.108 -07 000000610 INF: FPGA: Xmit ZDACW 28772\n [Z Motor]
17-03-17 21:00:52.108 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:00:52.118 -07 000000610 INF: FPGA: 'ZDACW 28772' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.118 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:52.118 -07 000000547 INF: FPGA: Recv ZDACR 28772
17-03-17 21:00:52.128 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:52.128 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:52.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.278 -07 000000627 INF: FPGA: Recv ZSGSRD 29788
17-03-17 21:00:52.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:52.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.288 -07 000000431 INF: FPGA: Recv ZSGSRD 29794
17-03-17 21:00:52.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.298 -07 000000627 INF: FPGA: Recv ZSGSRD 29794
17-03-17 21:00:52.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.308 -07 000000547 INF: FPGA: Recv ZSGSRD 29796
17-03-17 21:00:52.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.318 -07 000000512 INF: FPGA: Recv ZSGSRD 29787
17-03-17 21:00:52.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.328 -07 000000431 INF: FPGA: Recv ZSGSRD 29790
17-03-17 21:00:52.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.338 -07 000000512 INF: FPGA: Recv ZSGSRD 29797
17-03-17 21:00:52.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.348 -07 000000476 INF: FPGA: Recv ZSGSRD 29788
17-03-17 21:00:52.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.358 -07 000000512 INF: FPGA: Recv ZSGSRD 29788
17-03-17 21:00:52.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:52.368 -07 000000012 INF: FPGA: Recv ZSGSRD 29791
17-03-17 21:00:52.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.378 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:52.378 -07 000000431 INF: FPGA: Recv ZPIEZORD 25509
17-03-17 21:00:52.388 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:52.388 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -9.4 V.
17-03-17 21:00:52.388 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29791 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29790 (-130.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29787 (-130.9 uncal um), Max = 29797 (-131.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:00:52.388 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29791, posNoise = 6, negNoise = 4
17-03-17 21:00:52.388 -07 000000610 INF: Z Motor: After move to -0.131710, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:52.388 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 21:00:52.388 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:52.388 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:52.388 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:52.388 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:52.388 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:52.388 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:52.398 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:52.398 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:52.398 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 7 ms.
17-03-17 21:00:52.398 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:52.398 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:52.398 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:52.398 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:52.398 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:52.398 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:52.398 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:52.418 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:00:52.418 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 26 ms.
17-03-17 21:00:52.418 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:00:52.418 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:00:52.418 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28949 150\n [Camera]
17-03-17 21:00:52.618 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:52.978 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.975845,
17-03-17 21:00:53.038 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:53.038 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:53.038 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:53.038 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:53.038 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:00:53.048 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:53.048 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:53.048 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:53.048 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:53.048 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:00:53.228 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28949 808
17-03-17 21:00:53.388 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 960
17-03-17 21:00:53.418 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:00:53.418 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:00:53.418 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:00:53.418 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:53.418 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:00:53.418 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:53.428 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:53.428 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:00:53.428 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:53.428 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:00:53.588 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:53.588 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:53.588 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:53.588 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:53.588 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:53.588 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:53.588 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-17 21:00:53.588 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:53.588 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:53.588 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-17 21:00:53.778 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:00:53.778 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:53.778 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28949 150' command took 2 ms to send, 1355 ms to get response, and 1361 ms overall
17-03-17 21:00:53.778 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.132082
17-03-17 21:00:53.788 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13208 mm
17-03-17 21:00:53.788 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:53.788 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 21:00:53.788 -07 000000512 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-17 21:00:53.788 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:53.788 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 28853, sync = True, waitForSettling = False)
17-03-17 21:00:53.788 -07 000000547 INF: Z Motor: Moving to -0.132081 mm, started at -0.131707 mm, distance = -0.37 um
17-03-17 21:00:53.788 -07 000000476 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:00:53.798 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:00:53.798 -07 000000512 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:53.798 -07 000000512 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:53.798 -07 000000512 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:00:53.798 -07 000000547 INF: FPGA: Xmit ZDACW 28853\n [Z Motor]
17-03-17 21:00:53.798 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:00:53.808 -07 000000547 INF: FPGA: 'ZDACW 28853' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:00:53.808 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:53.818 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:53.818 -07 000000012 INF: FPGA: Recv ZDACR 28853
17-03-17 21:00:53.828 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:00:53.828 -07 000000547 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-17 21:00:53.988 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 21:00:53.988 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 21:00:53.988 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:53.998 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:53.998 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-17 21:00:53.998 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 407 ms.
17-03-17 21:00:53.998 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-17 21:00:53.998 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:53.998 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:54.008 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-17 21:00:54.188 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 21:00:54.188 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 389 ms overall
17-03-17 21:00:54.218 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:54.228 -07 000000618 INF: FPGA: Recv YRDPOS 136273
17-03-17 21:00:54.228 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:00:54.228 -07 000000512 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:54.228 -07 000000512 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:00:54.228 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.838 mm, average velocity = 2.155 mm/sec
17-03-17 21:00:55.178 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:55.178 -07 000000626 INF: FPGA: Recv YRDPOS 136273
17-03-17 21:00:55.188 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:55.188 -07 000000512 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:55.208 -07 000000512 INF: Y Motor: After move to 66.552605, error = -0.013054, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:55.208 -07 000000512 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:55.208 -07 000000512 INF: Y Motor: Moved to 66.5396 after 1418 ms (table move)
17-03-17 21:00:55.208 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132081 mm (DAC = 28853)
17-03-17 21:00:55.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.208 -07 000000431 INF: FPGA: Recv ZSGSRD 29849
17-03-17 21:00:55.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:00:55.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.218 -07 000000547 INF: FPGA: Recv ZSGSRD 29850
17-03-17 21:00:55.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:55.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.228 -07 000000431 INF: FPGA: Recv ZSGSRD 29849
17-03-17 21:00:55.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.238 -07 000000547 INF: FPGA: Recv ZSGSRD 29856
17-03-17 21:00:55.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:00:55.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.248 -07 000000431 INF: FPGA: Recv ZSGSRD 29856
17-03-17 21:00:55.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.258 -07 000000547 INF: FPGA: Recv ZSGSRD 29850
17-03-17 21:00:55.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.268 -07 000000547 INF: FPGA: Recv ZSGSRD 29846
17-03-17 21:00:55.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.278 -07 000000012 INF: FPGA: Recv ZSGSRD 29841
17-03-17 21:00:55.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.288 -07 000000547 INF: FPGA: Recv ZSGSRD 29855
17-03-17 21:00:55.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.298 -07 000000547 INF: FPGA: Recv ZSGSRD 29852
17-03-17 21:00:55.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.308 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:55.308 -07 000000012 INF: FPGA: Recv ZPIEZORD 25643
17-03-17 21:00:55.318 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.318 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.403 V. Piezo Error = -9.2 V.
17-03-17 21:00:55.318 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.1 um, Read 10 ADC samples: Avg = 29850 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29850 (-131.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29841 (-131.2 uncal um), Max = 29856 (-131.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:00:55.318 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29850, posNoise = 6, negNoise = 9
17-03-17 21:00:55.318 -07 000000610 INF: Z Motor: After move to -0.132081, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:55.318 -07 000000610 INF: Z Motor: Settle wait time = 1418 ms, measure time = 104 ms (allowed 150 ms), total time = 1522 ms
17-03-17 21:00:55.318 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:00:55.368 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1579 ms
17-03-17 21:00:55.368 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:55.368 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53955078125, Z-position -0.1320860844427. ----------
17-03-17 21:00:55.368 -07 000000610 INF: Cycle	45	Tile	9	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:55.368 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28677, sync = True, waitForSettling = True)
17-03-17 21:00:55.368 -07 000000610 INF: Z Motor: Moving to -0.131275 mm, started at -0.132086 mm, distance = 0.81 um
17-03-17 21:00:55.368 -07 000000610 INF: FPGA: Xmit ZDACW 28677\n [Z Motor]
17-03-17 21:00:55.368 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:00:55.378 -07 000000610 INF: FPGA: 'ZDACW 28677' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:55.378 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:55.378 -07 000000512 INF: FPGA: Recv ZDACR 28677
17-03-17 21:00:55.388 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.388 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:55.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.538 -07 000000512 INF: FPGA: Recv ZSGSRD 29726
17-03-17 21:00:55.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:55.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.548 -07 000000626 INF: FPGA: Recv ZSGSRD 29726
17-03-17 21:00:55.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.558 -07 000000012 INF: FPGA: Recv ZSGSRD 29726
17-03-17 21:00:55.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.568 -07 000000626 INF: FPGA: Recv ZSGSRD 29726
17-03-17 21:00:55.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.578 -07 000000012 INF: FPGA: Recv ZSGSRD 29732
17-03-17 21:00:55.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.588 -07 000000626 INF: FPGA: Recv ZSGSRD 29721
17-03-17 21:00:55.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.598 -07 000000012 INF: FPGA: Recv ZSGSRD 29722
17-03-17 21:00:55.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.608 -07 000000626 INF: FPGA: Recv ZSGSRD 29722
17-03-17 21:00:55.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:55.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.618 -07 000000012 INF: FPGA: Recv ZSGSRD 29723
17-03-17 21:00:55.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:55.628 -07 000000626 INF: FPGA: Recv ZSGSRD 29731
17-03-17 21:00:55.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.638 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:55.638 -07 000000012 INF: FPGA: Recv ZPIEZORD 25450
17-03-17 21:00:55.648 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:55.648 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.4 V.
17-03-17 21:00:55.648 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29726 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29726 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29721 (-130.5 uncal um), Max = 29732 (-130.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:00:55.648 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29726, posNoise = 6, negNoise = 5
17-03-17 21:00:55.648 -07 000000610 INF: Z Motor: After move to -0.131275, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:55.648 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:00:55.648 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:55.648 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:55.648 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:55.648 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:55.648 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:55.648 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:55.648 -07 000000476 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:55.648 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:55.648 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:00:55.648 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:55.648 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:00:55.648 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:55.648 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:00:55.648 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:55.648 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:55.648 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:55.658 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:00:55.658 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 21:00:55.658 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:00:55.658 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:00:55.668 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28853 150\n [Camera]
17-03-17 21:00:55.868 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-17 21:00:56.288 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:56.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:56.288 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:56.288 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:56.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:56.288 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:56.298 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:56.298 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:00:56.298 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:56.298 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:00:56.478 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28853 808
17-03-17 21:00:56.628 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:00:56.668 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 21:00:56.668 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 21:00:56.668 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:56.678 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:00:56.678 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:00:56.678 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:00:56.678 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:56.678 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:00:56.678 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:00:56.688 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:00:56.838 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:00:56.838 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:00:56.838 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:56.838 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:56.838 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:00:56.838 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:00:56.838 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:00:56.838 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:56.838 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:56.838 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:00:56.838 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:00:56.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:00:57.028 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:00:57.028 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:00:57.028 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28853 150' command took 2 ms to send, 1353 ms to get response, and 1362 ms overall
17-03-17 21:00:57.028 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.132014
17-03-17 21:00:57.028 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13201 mm
17-03-17 21:00:57.028 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:00:57.028 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 21:00:57.028 -07 000000382 INF: Y Motor: Moving to 67.3826 mm, started at 66.5396 mm, delta = 0.8431 mm
17-03-17 21:00:57.028 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:57.228 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 21:00:57.228 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:00:57.228 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:57.228 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 392 ms.
17-03-17 21:00:57.228 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:00:57.228 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:00:57.238 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:57.238 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 21:00:57.238 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:00:57.238 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-17 21:00:57.248 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 28838, sync = True, waitForSettling = False)
17-03-17 21:00:57.248 -07 000000012 INF: Z Motor: Moving to -0.132012 mm, started at -0.131289 mm, distance = -0.72 um
17-03-17 21:00:57.248 -07 000000012 INF: FPGA: Xmit ZDACW 28838\n [Z Motor]
17-03-17 21:00:57.248 -07 000000431 INF: FPGA: Recv YRDPOS 136273
17-03-17 21:00:57.248 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:00:57.248 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 217 ms to get response, and 220 ms overall
17-03-17 21:00:57.248 -07 000000382 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:57.248 -07 000000382 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:00:57.248 -07 000000382 INF: Y Motor: Moving 1349 steps-27
17-03-17 21:00:57.258 -07 000000012 INF: FPGA: 'ZDACW 28838' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:00:57.258 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:57.258 -07 000000431 INF: FPGA: Recv ZDACR 28838
17-03-17 21:00:57.268 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:00:57.268 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:57.268 -07 000000012 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet))
17-03-17 21:00:57.638 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:00:57.638 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 389 ms overall
17-03-17 21:00:57.678 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:57.688 -07 000000012 INF: FPGA: Recv YRDPOS 137978
17-03-17 21:00:57.688 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-17 21:00:57.688 -07 000000382 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:57.688 -07 000000382 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-17 21:00:57.688 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.843 mm, average velocity = 2.156 mm/sec
17-03-17 21:00:58.348 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.988112,
17-03-17 21:00:58.638 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:00:58.638 -07 000000502 INF: FPGA: Recv YRDPOS 137978
17-03-17 21:00:58.648 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:58.648 -07 000000382 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:00:58.668 -07 000000382 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:00:58.668 -07 000000382 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:00:58.668 -07 000000382 INF: Y Motor: Moved to 67.3721 after 1636 ms (table move)
17-03-17 21:00:58.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132012 mm (DAC = 28838)
17-03-17 21:00:58.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.688 -07 000000382 INF: FPGA: Recv ZSGSRD 29840
17-03-17 21:00:58.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 21:00:58.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.698 -07 000000576 INF: FPGA: Recv ZSGSRD 29841
17-03-17 21:00:58.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.718 -07 000000012 INF: FPGA: Recv ZSGSRD 29838
17-03-17 21:00:58.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:00:58.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.728 -07 000000576 INF: FPGA: Recv ZSGSRD 29840
17-03-17 21:00:58.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.758 -07 000000012 INF: FPGA: Recv ZSGSRD 29838
17-03-17 21:00:58.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:00:58.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.768 -07 000000458 INF: FPGA: Recv ZSGSRD 29840
17-03-17 21:00:58.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.778 -07 000000458 INF: FPGA: Recv ZSGSRD 29845
17-03-17 21:00:58.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.788 -07 000000458 INF: FPGA: Recv ZSGSRD 29840
17-03-17 21:00:58.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.798 -07 000000012 INF: FPGA: Recv ZSGSRD 29839
17-03-17 21:00:58.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.808 -07 000000012 INF: FPGA: Recv ZSGSRD 29843
17-03-17 21:00:58.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.818 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:58.818 -07 000000458 INF: FPGA: Recv ZPIEZORD 25619
17-03-17 21:00:58.828 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.400 V. Piezo Error = -9.3 V.
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29840 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29840 (-131.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29838 (-131.2 uncal um), Max = 29845 (-131.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29840, posNoise = 5, negNoise = 2
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: After move to -0.132012, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: Settle wait time = 1423 ms, measure time = 154 ms (allowed 150 ms), total time = 1577 ms
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 154 ms, longer than max expected time of 150 ms
17-03-17 21:00:58.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1794 ms
17-03-17 21:00:58.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:00:58.828 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.132021842321282. ----------
17-03-17 21:00:58.828 -07 000000610 INF: Cycle	45	Tile	10	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28662, sync = True, waitForSettling = True)
17-03-17 21:00:58.828 -07 000000610 INF: Z Motor: Moving to -0.131206 mm, started at -0.132022 mm, distance = 0.82 um
17-03-17 21:00:58.828 -07 000000610 INF: FPGA: Xmit ZDACW 28662\n [Z Motor]
17-03-17 21:00:58.828 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:00:58.838 -07 000000610 INF: FPGA: 'ZDACW 28662' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:00:58.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:00:58.838 -07 000000480 INF: FPGA: Recv ZDACR 28662
17-03-17 21:00:58.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:58.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:00:58.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:58.998 -07 000000480 INF: FPGA: Recv ZSGSRD 29717
17-03-17 21:00:59.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:00:59.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.008 -07 000000431 INF: FPGA: Recv ZSGSRD 29719
17-03-17 21:00:59.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.018 -07 000000431 INF: FPGA: Recv ZSGSRD 29718
17-03-17 21:00:59.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.028 -07 000000431 INF: FPGA: Recv ZSGSRD 29716
17-03-17 21:00:59.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.038 -07 000000431 INF: FPGA: Recv ZSGSRD 29713
17-03-17 21:00:59.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.048 -07 000000431 INF: FPGA: Recv ZSGSRD 29715
17-03-17 21:00:59.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.058 -07 000000431 INF: FPGA: Recv ZSGSRD 29714
17-03-17 21:00:59.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.068 -07 000000480 INF: FPGA: Recv ZSGSRD 29705
17-03-17 21:00:59.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.078 -07 000000431 INF: FPGA: Recv ZSGSRD 29716
17-03-17 21:00:59.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:00:59.088 -07 000000576 INF: FPGA: Recv ZSGSRD 29716
17-03-17 21:00:59.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.098 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:00:59.098 -07 000000512 INF: FPGA: Recv ZPIEZORD 25430
17-03-17 21:00:59.108 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:00:59.108 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.374 V. Piezo Error = -9.4 V.
17-03-17 21:00:59.108 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29715 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29716 (-130.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29705 (-130.4 uncal um), Max = 29719 (-130.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:00:59.108 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29715, posNoise = 4, negNoise = 10
17-03-17 21:00:59.108 -07 000000610 INF: Z Motor: After move to -0.131206, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:00:59.108 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:00:59.108 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:00:59.108 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:00:59.108 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:00:59.108 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:00:59.108 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:00:59.108 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:00:59.108 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:00:59.108 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:00:59.108 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:00:59.108 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:00:59.108 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:00:59.108 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:00:59.108 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:00:59.108 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:00:59.118 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:00:59.118 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:00:59.128 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 21:00:59.128 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:00:59.128 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:00:59.128 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:00:59.128 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28838 150\n [Camera]
17-03-17 21:00:59.328 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:00:59.758 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:00:59.758 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:00:59.758 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:00:59.758 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:00:59.758 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:00:59.758 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:00:59.758 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:00:59.758 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:00:59.888 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:00:59.888 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:01:00.138 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:01:00.138 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:01:00.138 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:00.138 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:00.138 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:01:00.148 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28838 808
17-03-17 21:01:00.148 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:00.258 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 366 ms.
17-03-17 21:01:00.258 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 367 ms.
17-03-17 21:01:00.258 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:00.258 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:00.268 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-17 21:01:00.298 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:00.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:00.298 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:00.308 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:00.308 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:00.308 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:00.308 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:00.308 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:01:00.308 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:00.308 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:01:00.688 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:01:00.688 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:01:00.688 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:00.688 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:01:00.688 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:01:00.688 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:00.688 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:00.688 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:01:00.688 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:00.698 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:01:00.738 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:01:00.738 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:00.738 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28838 150' command took 2 ms to send, 1590 ms to get response, and 1601 ms overall
17-03-17 21:01:00.738 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.131708
17-03-17 21:01:00.738 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13171 mm
17-03-17 21:01:00.738 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:00.738 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 21:01:00.738 -07 000000438 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-17 21:01:00.738 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:00.738 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 28772, sync = True, waitForSettling = False)
17-03-17 21:01:00.738 -07 000000512 INF: Z Motor: Moving to -0.131710 mm, started at -0.131219 mm, distance = -0.49 um
17-03-17 21:01:00.748 -07 000000512 INF: FPGA: Xmit ZDACW 28772\n [Z Motor]
17-03-17 21:01:01.738 -07 000000618 INF: FPGA: Recv YRDPOS 137979
17-03-17 21:01:01.738 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 21:01:01.738 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 990 ms to get response, and 993 ms overall
17-03-17 21:01:01.738 -07 000000512 INF: FPGA: 'ZDACW 28772' command took 0 ms to send, 980 ms to get response, and 991 ms overall
17-03-17 21:01:01.738 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:01.738 -07 000000438 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:01.738 -07 000000618 INF: FPGA: Recv ZDACR 28772
17-03-17 21:01:01.738 -07 000000438 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:01.738 -07 000000438 INF: Y Motor: Moving 1344 steps-22
17-03-17 21:01:01.748 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:01:01.748 -07 000000512 INF: Z Motor: MoveAbsStepped took 1000 ms (did NOT wait for settling yet))
17-03-17 21:01:01.748 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:01.838 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:01.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:02.118 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 21:01:02.118 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-17 21:01:02.158 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:02.168 -07 000000512 INF: FPGA: Recv YRDPOS 139684
17-03-17 21:01:02.168 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-17 21:01:02.168 -07 000000438 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:02.168 -07 000000438 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:01:02.168 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.841 mm, average velocity = 2.189 mm/sec
17-03-17 21:01:03.118 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:03.118 -07 000000512 INF: FPGA: Recv YRDPOS 139685
17-03-17 21:01:03.128 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:03.128 -07 000000438 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:03.148 -07 000000438 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:03.148 -07 000000438 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:01:03.148 -07 000000438 INF: Y Motor: Moved to 68.2056 after 2403 ms (table move)
17-03-17 21:01:03.148 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131710 mm (DAC = 28772)
17-03-17 21:01:03.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.148 -07 000000512 INF: FPGA: Recv ZSGSRD 29796
17-03-17 21:01:03.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:01:03.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.158 -07 000000547 INF: FPGA: Recv ZSGSRD 29794
17-03-17 21:01:03.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.168 -07 000000618 INF: FPGA: Recv ZSGSRD 29796
17-03-17 21:01:03.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.178 -07 000000438 INF: FPGA: Recv ZSGSRD 29798
17-03-17 21:01:03.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.188 -07 000000547 INF: FPGA: Recv ZSGSRD 29799
17-03-17 21:01:03.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.198 -07 000000438 INF: FPGA: Recv ZSGSRD 29787
17-03-17 21:01:03.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.208 -07 000000547 INF: FPGA: Recv ZSGSRD 29795
17-03-17 21:01:03.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.218 -07 000000547 INF: FPGA: Recv ZSGSRD 29790
17-03-17 21:01:03.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.228 -07 000000438 INF: FPGA: Recv ZSGSRD 29794
17-03-17 21:01:03.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.238 -07 000000618 INF: FPGA: Recv ZSGSRD 29799
17-03-17 21:01:03.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.248 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:03.248 -07 000000438 INF: FPGA: Recv ZPIEZORD 25577
17-03-17 21:01:03.258 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.258 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -9.3 V.
17-03-17 21:01:03.258 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29795 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29796 (-131.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29787 (-130.9 uncal um), Max = 29799 (-131.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:01:03.258 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29795, posNoise = 4, negNoise = 8
17-03-17 21:01:03.258 -07 000000610 INF: Z Motor: After move to -0.131710, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:03.258 -07 000000610 INF: Z Motor: Settle wait time = 2405 ms, measure time = 106 ms (allowed 150 ms), total time = 2511 ms
17-03-17 21:01:03.258 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:03.308 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2566 ms
17-03-17 21:01:03.308 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:03.308 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.131732752774903. ----------
17-03-17 21:01:03.308 -07 000000610 INF: Cycle	45	Tile	11	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:03.308 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28595, sync = True, waitForSettling = True)
17-03-17 21:01:03.308 -07 000000610 INF: Z Motor: Moving to -0.130900 mm, started at -0.131733 mm, distance = 0.83 um
17-03-17 21:01:03.308 -07 000000610 INF: FPGA: Xmit ZDACW 28595\n [Z Motor]
17-03-17 21:01:03.308 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:01:03.318 -07 000000610 INF: FPGA: 'ZDACW 28595' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:01:03.318 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:03.318 -07 000000512 INF: FPGA: Recv ZDACR 28595
17-03-17 21:01:03.328 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.328 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:03.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.478 -07 000000618 INF: FPGA: Recv ZSGSRD 29668
17-03-17 21:01:03.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:03.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.488 -07 000000433 INF: FPGA: Recv ZSGSRD 29675
17-03-17 21:01:03.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.498 -07 000000618 INF: FPGA: Recv ZSGSRD 29668
17-03-17 21:01:03.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.508 -07 000000547 INF: FPGA: Recv ZSGSRD 29664
17-03-17 21:01:03.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.518 -07 000000618 INF: FPGA: Recv ZSGSRD 29663
17-03-17 21:01:03.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.528 -07 000000547 INF: FPGA: Recv ZSGSRD 29661
17-03-17 21:01:03.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.538 -07 000000618 INF: FPGA: Recv ZSGSRD 29666
17-03-17 21:01:03.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.548 -07 000000547 INF: FPGA: Recv ZSGSRD 29666
17-03-17 21:01:03.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.558 -07 000000438 INF: FPGA: Recv ZSGSRD 29665
17-03-17 21:01:03.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:03.568 -07 000000547 INF: FPGA: Recv ZSGSRD 29669
17-03-17 21:01:03.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.578 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:03.578 -07 000000438 INF: FPGA: Recv ZPIEZORD 25408
17-03-17 21:01:03.588 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:03.588 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.363 V. Piezo Error = -9.4 V.
17-03-17 21:01:03.588 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29666 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29666 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29661 (-130.1 uncal um), Max = 29675 (-130.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:01:03.588 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29666, posNoise = 9, negNoise = 5
17-03-17 21:01:03.588 -07 000000610 INF: Z Motor: After move to -0.130900, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:03.588 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:01:03.588 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:03.588 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:03.588 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:03.588 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:03.588 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:03.588 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:03.588 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:03.588 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:03.588 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:01:03.588 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:03.588 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:03.588 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:03.588 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:03.588 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:03.598 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:01:03.598 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:03.608 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 21:01:03.608 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:01:03.608 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:01:03.608 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:01:03.608 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28772 150\n [Camera]
17-03-17 21:01:03.718 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.996267,
17-03-17 21:01:03.808 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:04.228 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:04.228 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:04.228 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:04.228 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:04.228 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:01:04.228 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:04.228 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:04.228 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:04.228 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:04.228 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-17 21:01:04.418 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28772 808
17-03-17 21:01:04.568 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:04.608 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:01:04.608 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:01:04.608 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:04.618 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:04.618 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:01:04.618 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:01:04.618 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:04.618 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:04.618 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:01:04.618 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:01:04.778 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:04.778 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:04.778 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:04.778 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:04.778 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:01:04.778 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:04.778 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:04.778 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:04.898 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:04.898 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:01:04.968 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:01:04.968 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:04.968 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28772 150' command took 2 ms to send, 1354 ms to get response, and 1361 ms overall
17-03-17 21:01:04.968 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:01:04.968 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.130904029408616. ------
17-03-17 21:01:04.978 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:01:05.168 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 21:01:05.168 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:01:05.168 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:05.178 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:01:05.178 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:01:05.188 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13752 mm
17-03-17 21:01:05.188 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:05.288 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 21:01:05.288 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:01:05.288 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:05.288 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:01:05.298 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 517 ms.
17-03-17 21:01:05.308 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:01:05.308 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 321 ms to get response, and 332 ms overall
17-03-17 21:01:05.308 -07 000000438 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:01:05.308 -07 000000458 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 21:01:05.308 -07 000000458 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-17 21:01:05.318 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:06.238 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 30042, sync = True, waitForSettling = False)
17-03-17 21:01:06.238 -07 000000627 INF: Z Motor: Moving to -0.137523 mm, started at -0.130904 mm, distance = -6.62 um
17-03-17 21:01:06.238 -07 000000627 INF: FPGA: Xmit ZDACW 30042\n [Z Motor]
17-03-17 21:01:07.238 -07 000000012 INF: FPGA: Recv YRDPOS 139685
17-03-17 21:01:07.238 -07 000000012 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:01:07.238 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:01:07.238 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1910 ms to get response, and 1925 ms overall
17-03-17 21:01:07.238 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:07.238 -07 000000458 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:07.238 -07 000000458 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:07.238 -07 000000458 INF: Y Motor: Moving 1339 steps-15
17-03-17 21:01:07.238 -07 000000627 INF: FPGA: 'ZDACW 30042' command took 0 ms to send, 990 ms to get response, and 998 ms overall
17-03-17 21:01:07.238 -07 000000458 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:07.238 -07 000000438 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 1920 ms to get response, and 1928 ms overall
17-03-17 21:01:07.238 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:07.248 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:07.248 -07 000000438 INF: FPGA: Recv ZDACR 30042
17-03-17 21:01:07.258 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:01:07.258 -07 000000627 INF: Z Motor: MoveAbsStepped took 1018 ms (did NOT wait for settling yet))
17-03-17 21:01:07.618 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-17 21:01:07.618 -07 000000458 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall
17-03-17 21:01:07.648 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:07.658 -07 000000012 INF: FPGA: Recv YRDPOS 141368
17-03-17 21:01:07.658 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:01:07.658 -07 000000458 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:07.658 -07 000000458 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 21:01:07.658 -07 000000458 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.837 mm, average velocity = 2.214 mm/sec
17-03-17 21:01:08.608 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:08.608 -07 000000012 INF: FPGA: Recv YRDPOS 141369
17-03-17 21:01:08.618 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.618 -07 000000458 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:08.638 -07 000000458 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:08.638 -07 000000458 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:01:08.638 -07 000000458 INF: Y Motor: Moved to 69.0278 after 3328 ms (table move)
17-03-17 21:01:08.638 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137523 mm (DAC = 30042)
17-03-17 21:01:08.638 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.638 -07 000000438 INF: FPGA: Recv ZSGSRD 30699
17-03-17 21:01:08.648 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:08.648 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.648 -07 000000438 INF: FPGA: Recv ZSGSRD 30702
17-03-17 21:01:08.658 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.658 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.658 -07 000000627 INF: FPGA: Recv ZSGSRD 30695
17-03-17 21:01:08.668 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.668 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.668 -07 000000627 INF: FPGA: Recv ZSGSRD 30701
17-03-17 21:01:08.678 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.678 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.678 -07 000000458 INF: FPGA: Recv ZSGSRD 30694
17-03-17 21:01:08.688 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.688 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.688 -07 000000458 INF: FPGA: Recv ZSGSRD 30694
17-03-17 21:01:08.698 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.698 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.698 -07 000000458 INF: FPGA: Recv ZSGSRD 30697
17-03-17 21:01:08.708 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.708 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.708 -07 000000438 INF: FPGA: Recv ZSGSRD 30698
17-03-17 21:01:08.718 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.718 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.718 -07 000000438 INF: FPGA: Recv ZSGSRD 30699
17-03-17 21:01:08.728 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.728 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:08.728 -07 000000458 INF: FPGA: Recv ZSGSRD 30698
17-03-17 21:01:08.738 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.738 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:08.738 -07 000000438 INF: FPGA: Recv ZPIEZORD 26754
17-03-17 21:01:08.748 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:08.748 -07 000000618 INF: Z Motor: Piezo is near 37.2 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.584 V. Piezo Error = -8.7 V.
17-03-17 21:01:08.748 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.5 um, Read 10 ADC samples: Avg = 30698 (-136.7 uncal um), Error = 0.8 uncal um, Median = 30698 (-136.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30694 (-136.7 uncal um), Max = 30702 (-136.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:01:08.748 -07 000000618 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30698, posNoise = 4, negNoise = 4
17-03-17 21:01:08.748 -07 000000618 INF: Z Motor: After move to -0.137523, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:08.748 -07 000000618 INF: Z Motor: Settle wait time = 2405 ms, measure time = 104 ms (allowed 150 ms), total time = 2509 ms
17-03-17 21:01:08.748 -07 000000618 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:08.798 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 3609 ms
17-03-17 21:01:08.798 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:08.798 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:08.798 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:08.798 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:08.798 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:08.798 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:01:08.798 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:08.798 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:08.798 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:01:08.798 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:01:08.808 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:01:08.818 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 21:01:08.818 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 21:01:08.818 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:01:08.868 -07 000000576 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:01:09.058 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:01:09.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:01:09.068 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:01:09.068 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-17 21:01:09.078 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.012614,
17-03-17 21:01:09.098 -07 000000458 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:01:09.108 -07 000000012 INF: FPGA: Recv CAMSNAP
17-03-17 21:01:09.108 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 285 ms overall
17-03-17 21:01:09.188 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 124 ms.
17-03-17 21:01:09.188 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:09.188 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:01:09.188 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms.
17-03-17 21:01:09.208 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:01:09.208 -07 000000012 INF: Autofocus start
17-03-17 21:01:09.208 -07 000000012 INF: MeasureProfile start
17-03-17 21:01:09.208 -07 000000627 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:01:09.218 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:01:09.218 -07 000000438 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:01:09.218 -07 000000012 INF: MeasureProfile done
17-03-17 21:01:09.218 -07 000000012 INF: X=9  Z correction [um]=0.01934518
17-03-17 21:01:09.218 -07 000000012 INF: Autofocus finished
17-03-17 21:01:09.418 -07 000000012 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:01:09.418 -07 000000438 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:01:09.418 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.137533816338913. ----------
17-03-17 21:01:09.418 -07 000000610 INF: Cycle	45	Tile	12	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:09.418 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28558, sync = True, waitForSettling = True)
17-03-17 21:01:09.428 -07 000000610 INF: Z Motor: Moving to -0.130730 mm, started at -0.137534 mm, distance = 6.80 um
17-03-17 21:01:09.448 -07 000000610 INF: FPGA: Xmit ZDACW 28558\n [Z Motor]
17-03-17 21:01:09.448 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:01:09.458 -07 000000610 INF: FPGA: 'ZDACW 28558' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:01:09.458 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:09.458 -07 000000576 INF: FPGA: Recv ZDACR 28558
17-03-17 21:01:09.468 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.468 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:09.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.618 -07 000000502 INF: FPGA: Recv ZSGSRD 29638
17-03-17 21:01:09.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:09.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.628 -07 000000458 INF: FPGA: Recv ZSGSRD 29640
17-03-17 21:01:09.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.638 -07 000000576 INF: FPGA: Recv ZSGSRD 29642
17-03-17 21:01:09.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.648 -07 000000476 INF: FPGA: Recv ZSGSRD 29641
17-03-17 21:01:09.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.658 -07 000000502 INF: FPGA: Recv ZSGSRD 29638
17-03-17 21:01:09.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.668 -07 000000012 INF: FPGA: Recv ZSGSRD 29638
17-03-17 21:01:09.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.678 -07 000000627 INF: FPGA: Recv ZSGSRD 29639
17-03-17 21:01:09.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.688 -07 000000476 INF: FPGA: Recv ZSGSRD 29637
17-03-17 21:01:09.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.698 -07 000000502 INF: FPGA: Recv ZSGSRD 29640
17-03-17 21:01:09.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:09.708 -07 000000458 INF: FPGA: Recv ZSGSRD 29638
17-03-17 21:01:09.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.718 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:09.718 -07 000000576 INF: FPGA: Recv ZPIEZORD 25326
17-03-17 21:01:09.728 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:09.728 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.358 V. Piezo Error = -9.5 V.
17-03-17 21:01:09.728 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29639 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29638 (-129.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29637 (-129.9 uncal um), Max = 29642 (-130.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 21:01:09.728 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29639, posNoise = 3, negNoise = 2
17-03-17 21:01:09.728 -07 000000610 INF: Z Motor: After move to -0.130730, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:09.728 -07 000000610 INF: Z Motor: MoveAbsStepped took 301 ms)
17-03-17 21:01:09.728 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:09.728 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:09.728 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:09.728 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:09.728 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:09.728 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:09.728 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:09.728 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:09.728 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:09.728 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:09.728 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:09.728 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:09.738 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:09.738 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:09.738 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:01:09.738 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:09.748 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:01:09.748 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:01:09.748 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-17 21:01:09.748 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:01:09.758 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28735 150\n [Camera]
17-03-17 21:01:09.958 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:10.378 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:10.378 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:10.378 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:10.378 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:10.378 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:10.378 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:10.378 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:10.378 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:01:10.378 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:10.378 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) start.
17-03-17 21:01:10.568 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28735 808
17-03-17 21:01:10.718 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:10.778 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1458343128, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 21:01:10.778 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:01:10.778 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:10.778 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 21:01:10.778 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:10.778 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 21:01:10.778 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:01:10.778 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:10.788 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:10.788 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-17 21:01:10.918 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:10.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:10.928 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:10.928 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:10.928 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:10.928 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:10.928 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:01:10.928 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:10.928 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:10.928 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:01:11.118 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:01:11.118 -07 000000476 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:11.118 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28735 150' command took 2 ms to send, 1351 ms to get response, and 1361 ms overall
17-03-17 21:01:11.228 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.131279
17-03-17 21:01:11.228 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13128 mm
17-03-17 21:01:11.228 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:11.228 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 21:01:11.228 -07 000000502 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm
17-03-17 21:01:11.228 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:11.228 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 28678, sync = True, waitForSettling = False)
17-03-17 21:01:11.228 -07 000000627 INF: Z Motor: Moving to -0.131279 mm, started at -0.130731 mm, distance = -0.55 um
17-03-17 21:01:11.228 -07 000000476 INF: FPGA: Recv YRDPOS 141369
17-03-17 21:01:11.238 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:01:11.238 -07 000000627 INF: FPGA: Xmit ZDACW 28678\n [Z Motor]
17-03-17 21:01:11.238 -07 000000502 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:11.238 -07 000000502 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:11.238 -07 000000502 INF: Y Motor: Moving 1352 steps-31
17-03-17 21:01:11.238 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:01:11.248 -07 000000627 INF: FPGA: 'ZDACW 28678' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:01:11.248 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:11.248 -07 000000576 INF: FPGA: Recv ZDACR 28678
17-03-17 21:01:11.258 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:11.258 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:11.258 -07 000000627 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:01:11.318 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 388 ms.
17-03-17 21:01:11.318 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:01:11.318 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:11.318 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:11.318 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 395 ms.
17-03-17 21:01:11.318 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:01:11.318 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:11.328 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:11.328 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 21:01:11.328 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:01:11.628 -07 000000012 INF: FPGA: Recv YMVTILE
17-03-17 21:01:11.628 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:01:11.668 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:11.668 -07 000000012 INF: FPGA: Recv YRDPOS 143080
17-03-17 21:01:11.678 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:11.678 -07 000000502 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:11.678 -07 000000502 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 21:01:11.678 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec
17-03-17 21:01:11.838 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:11.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:12.628 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:12.628 -07 000000576 INF: FPGA: Recv YRDPOS 143080
17-03-17 21:01:12.638 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:12.638 -07 000000502 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:12.668 -07 000000502 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:12.668 -07 000000502 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:01:12.668 -07 000000502 INF: Y Motor: Moved to 69.8633 after 1437 ms (table move)
17-03-17 21:01:12.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131279 mm (DAC = 28678)
17-03-17 21:01:12.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.668 -07 000000627 INF: FPGA: Recv ZSGSRD 29722
17-03-17 21:01:12.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:12.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.678 -07 000000618 INF: FPGA: Recv ZSGSRD 29727
17-03-17 21:01:12.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.688 -07 000000012 INF: FPGA: Recv ZSGSRD 29719
17-03-17 21:01:12.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.698 -07 000000476 INF: FPGA: Recv ZSGSRD 29731
17-03-17 21:01:12.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.708 -07 000000618 INF: FPGA: Recv ZSGSRD 29717
17-03-17 21:01:12.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.718 -07 000000012 INF: FPGA: Recv ZSGSRD 29720
17-03-17 21:01:12.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.728 -07 000000618 INF: FPGA: Recv ZSGSRD 29723
17-03-17 21:01:12.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.738 -07 000000012 INF: FPGA: Recv ZSGSRD 29722
17-03-17 21:01:12.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.748 -07 000000627 INF: FPGA: Recv ZSGSRD 29726
17-03-17 21:01:12.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.758 -07 000000012 INF: FPGA: Recv ZSGSRD 29732
17-03-17 21:01:12.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:12.768 -07 000000618 INF: FPGA: Recv ZPIEZORD 25493
17-03-17 21:01:12.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.778 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.3 V.
17-03-17 21:01:12.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29724 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29722 (-130.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29717 (-130.4 uncal um), Max = 29732 (-130.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:01:12.778 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29724, posNoise = 8, negNoise = 7
17-03-17 21:01:12.778 -07 000000610 INF: Z Motor: After move to -0.131279, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:12.778 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 106 ms (allowed 150 ms), total time = 1547 ms
17-03-17 21:01:12.778 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:12.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-17 21:01:12.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:12.828 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.131276633712838. ----------
17-03-17 21:01:12.828 -07 000000610 INF: Cycle	45	Tile	13	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:12.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28501, sync = True, waitForSettling = True)
17-03-17 21:01:12.828 -07 000000610 INF: Z Motor: Moving to -0.130469 mm, started at -0.131277 mm, distance = 0.81 um
17-03-17 21:01:12.828 -07 000000610 INF: FPGA: Xmit ZDACW 28501\n [Z Motor]
17-03-17 21:01:12.828 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 21:01:12.838 -07 000000610 INF: FPGA: 'ZDACW 28501' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:01:12.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:12.838 -07 000000502 INF: FPGA: Recv ZDACR 28501
17-03-17 21:01:12.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:12.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:12.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:12.998 -07 000000627 INF: FPGA: Recv ZSGSRD 29602
17-03-17 21:01:13.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.008 -07 000000576 INF: FPGA: Recv ZSGSRD 29596
17-03-17 21:01:13.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.018 -07 000000627 INF: FPGA: Recv ZSGSRD 29595
17-03-17 21:01:13.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.028 -07 000000502 INF: FPGA: Recv ZSGSRD 29599
17-03-17 21:01:13.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.038 -07 000000618 INF: FPGA: Recv ZSGSRD 29597
17-03-17 21:01:13.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.048 -07 000000618 INF: FPGA: Recv ZSGSRD 29599
17-03-17 21:01:13.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.058 -07 000000627 INF: FPGA: Recv ZSGSRD 29604
17-03-17 21:01:13.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.068 -07 000000576 INF: FPGA: Recv ZSGSRD 29600
17-03-17 21:01:13.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.078 -07 000000476 INF: FPGA: Recv ZSGSRD 29601
17-03-17 21:01:13.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:13.088 -07 000000627 INF: FPGA: Recv ZSGSRD 29591
17-03-17 21:01:13.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.098 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:13.098 -07 000000618 INF: FPGA: Recv ZPIEZORD 25336
17-03-17 21:01:13.108 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:13.108 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.349 V. Piezo Error = -9.4 V.
17-03-17 21:01:13.108 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29598 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29599 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29591 (-129.6 uncal um), Max = 29604 (-129.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:01:13.108 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29598, posNoise = 6, negNoise = 7
17-03-17 21:01:13.108 -07 000000610 INF: Z Motor: After move to -0.130469, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:13.108 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:01:13.108 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:13.108 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:13.108 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:13.108 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:13.108 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:13.108 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:13.108 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:13.108 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:13.108 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:13.108 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:13.108 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:13.108 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:13.118 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:01:13.118 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:13.118 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:13.118 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:13.128 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:01:13.128 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:01:13.128 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 21:01:13.128 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:01:13.128 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28678 150\n [Camera]
17-03-17 21:01:13.328 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:13.748 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:13.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:13.748 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:13.748 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:13.758 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:13.758 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:13.758 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:13.758 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:01:13.758 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:13.758 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:01:13.938 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28678 808
17-03-17 21:01:14.088 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:14.158 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 402 ms.
17-03-17 21:01:14.158 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-17 21:01:14.158 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:14.158 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 397 ms.
17-03-17 21:01:14.158 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:01:14.158 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:14.158 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:14.168 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-17 21:01:14.168 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:14.168 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms.
17-03-17 21:01:14.298 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:14.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:14.298 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:14.298 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:14.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:14.298 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:14.298 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:14.298 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:01:14.308 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:14.308 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:01:14.438 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.996267,
17-03-17 21:01:14.488 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1356
17-03-17 21:01:14.488 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:14.488 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28678 150' command took 2 ms to send, 1357 ms to get response, and 1363 ms overall
17-03-17 21:01:14.488 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.130758
17-03-17 21:01:14.488 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13076 mm
17-03-17 21:01:14.488 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:14.498 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 21:01:14.498 -07 000000502 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-17 21:01:14.498 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 28564, sync = True, waitForSettling = False)
17-03-17 21:01:14.498 -07 000000618 INF: Z Motor: Moving to -0.130758 mm, started at -0.130467 mm, distance = -0.29 um
17-03-17 21:01:14.508 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:14.508 -07 000000627 INF: FPGA: Recv YRDPOS 143080
17-03-17 21:01:14.518 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:01:14.518 -07 000000502 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:14.518 -07 000000502 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:14.518 -07 000000502 INF: Y Motor: Moving 1343 steps-19
17-03-17 21:01:14.518 -07 000000618 INF: FPGA: Xmit ZDACW 28564\n [Z Motor]
17-03-17 21:01:14.518 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:01:14.528 -07 000000618 INF: FPGA: 'ZDACW 28564' command took 1 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 21:01:14.528 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:14.538 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:14.538 -07 000000627 INF: FPGA: Recv ZDACR 28564
17-03-17 21:01:14.548 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:01:14.548 -07 000000618 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-17 21:01:14.698 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 21:01:14.698 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:01:14.698 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:14.698 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 21:01:14.698 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:01:14.698 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:14.708 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:14.708 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 21:01:14.708 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:14.708 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-17 21:01:14.898 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 21:01:14.898 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:01:14.938 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:14.938 -07 000000576 INF: FPGA: Recv YRDPOS 144770
17-03-17 21:01:14.948 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:01:14.948 -07 000000502 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:14.948 -07 000000502 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:01:14.948 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.169 mm/sec
17-03-17 21:01:15.898 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:15.898 -07 000000569 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:01:15.908 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:15.908 -07 000000502 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:15.928 -07 000000502 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:15.928 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:01:15.928 -07 000000502 INF: Y Motor: Moved to 70.6890 after 1430 ms (table move)
17-03-17 21:01:15.928 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130758 mm (DAC = 28564)
17-03-17 21:01:15.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.928 -07 000000502 INF: FPGA: Recv ZSGSRD 29642
17-03-17 21:01:15.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:01:15.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.938 -07 000000476 INF: FPGA: Recv ZSGSRD 29640
17-03-17 21:01:15.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:15.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.948 -07 000000502 INF: FPGA: Recv ZSGSRD 29649
17-03-17 21:01:15.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:15.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.958 -07 000000480 INF: FPGA: Recv ZSGSRD 29639
17-03-17 21:01:15.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:15.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.968 -07 000000502 INF: FPGA: Recv ZSGSRD 29635
17-03-17 21:01:15.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:15.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.978 -07 000000502 INF: FPGA: Recv ZSGSRD 29647
17-03-17 21:01:15.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:15.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.988 -07 000000502 INF: FPGA: Recv ZSGSRD 29638
17-03-17 21:01:15.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:15.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:15.998 -07 000000502 INF: FPGA: Recv ZSGSRD 29641
17-03-17 21:01:16.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.008 -07 000000476 INF: FPGA: Recv ZSGSRD 29639
17-03-17 21:01:16.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.018 -07 000000502 INF: FPGA: Recv ZSGSRD 29644
17-03-17 21:01:16.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.028 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:16.028 -07 000000476 INF: FPGA: Recv ZPIEZORD 25415
17-03-17 21:01:16.038 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.038 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.359 V. Piezo Error = -9.3 V.
17-03-17 21:01:16.038 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29641 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29640 (-130.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29635 (-129.9 uncal um), Max = 29649 (-130.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:01:16.038 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29641, posNoise = 8, negNoise = 6
17-03-17 21:01:16.038 -07 000000610 INF: Z Motor: After move to -0.130758, error = 0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:16.038 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 106 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:01:16.038 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:16.088 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-17 21:01:16.088 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:16.088 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.130743424105072. ----------
17-03-17 21:01:16.088 -07 000000610 INF: Cycle	45	Tile	14	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:16.088 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28387, sync = True, waitForSettling = True)
17-03-17 21:01:16.088 -07 000000610 INF: Z Motor: Moving to -0.129947 mm, started at -0.130743 mm, distance = 0.80 um
17-03-17 21:01:16.088 -07 000000610 INF: FPGA: Xmit ZDACW 28387\n [Z Motor]
17-03-17 21:01:16.088 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:01:16.098 -07 000000610 INF: FPGA: 'ZDACW 28387' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:16.098 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:16.098 -07 000000502 INF: FPGA: Recv ZDACR 28387
17-03-17 21:01:16.108 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.108 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:16.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.258 -07 000000476 INF: FPGA: Recv ZSGSRD 29517
17-03-17 21:01:16.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:16.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.268 -07 000000627 INF: FPGA: Recv ZSGSRD 29517
17-03-17 21:01:16.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.278 -07 000000012 INF: FPGA: Recv ZSGSRD 29512
17-03-17 21:01:16.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.288 -07 000000502 INF: FPGA: Recv ZSGSRD 29513
17-03-17 21:01:16.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.298 -07 000000012 INF: FPGA: Recv ZSGSRD 29523
17-03-17 21:01:16.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.308 -07 000000627 INF: FPGA: Recv ZSGSRD 29518
17-03-17 21:01:16.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.318 -07 000000476 INF: FPGA: Recv ZSGSRD 29511
17-03-17 21:01:16.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.328 -07 000000627 INF: FPGA: Recv ZSGSRD 29513
17-03-17 21:01:16.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.338 -07 000000618 INF: FPGA: Recv ZSGSRD 29521
17-03-17 21:01:16.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:16.348 -07 000000502 INF: FPGA: Recv ZSGSRD 29521
17-03-17 21:01:16.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.358 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:16.358 -07 000000627 INF: FPGA: Recv ZPIEZORD 25242
17-03-17 21:01:16.368 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:16.368 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.332 V. Piezo Error = -9.4 V.
17-03-17 21:01:16.368 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.9 um, Read 10 ADC samples: Avg = 29517 (-129.2 uncal um), Error = 0.8 uncal um, Median = 29517 (-129.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29511 (-129.1 uncal um), Max = 29523 (-129.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:01:16.368 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29517, posNoise = 6, negNoise = 6
17-03-17 21:01:16.368 -07 000000610 INF: Z Motor: After move to -0.129947, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:16.368 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:01:16.368 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:16.368 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:16.368 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:16.368 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:16.368 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:16.368 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:16.368 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:16.368 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:16.368 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:16.368 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:16.368 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:16.368 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:16.378 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:16.378 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:16.378 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:01:16.378 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:16.388 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:01:16.388 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:01:16.388 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:01:16.388 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:01:16.398 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28564 150\n [Camera]
17-03-17 21:01:16.598 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:16.838 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:16.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:17.018 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:17.018 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:17.018 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:17.018 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:17.018 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:01:17.018 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:17.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:17.018 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:17.018 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:17.018 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:01:17.208 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28564 808
17-03-17 21:01:17.358 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:17.388 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 21:01:17.398 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 21:01:17.398 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:17.398 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:01:17.398 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:01:17.398 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:17.398 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:17.398 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:17.398 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:01:17.408 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:01:17.558 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:17.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:17.568 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:17.568 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:17.568 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 21:01:17.568 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:17.568 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:17.568 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:17.568 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:17.568 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:01:17.758 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:01:17.758 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:17.758 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28564 150' command took 2 ms to send, 1351 ms to get response, and 1360 ms overall
17-03-17 21:01:17.758 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.130324
17-03-17 21:01:17.758 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13032 mm
17-03-17 21:01:17.758 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:17.758 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 21:01:17.758 -07 000000012 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm
17-03-17 21:01:17.758 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 28469, sync = True, waitForSettling = False)
17-03-17 21:01:17.758 -07 000000382 INF: Z Motor: Moving to -0.130323 mm, started at -0.129947 mm, distance = -0.38 um
17-03-17 21:01:17.758 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:17.758 -07 000000502 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:01:17.768 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:17.768 -07 000000012 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:17.768 -07 000000012 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:17.768 -07 000000012 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:01:17.768 -07 000000382 INF: FPGA: Xmit ZDACW 28469\n [Z Motor]
17-03-17 21:01:17.768 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:01:17.778 -07 000000382 INF: FPGA: 'ZDACW 28469' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:01:17.778 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:17.778 -07 000000502 INF: FPGA: Recv ZDACR 28469
17-03-17 21:01:17.788 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:17.788 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:17.788 -07 000000382 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 21:01:17.948 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:01:17.948 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:01:17.948 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:17.948 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:01:17.948 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:01:17.948 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:17.958 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:01:17.958 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:01:17.958 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:01:17.968 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:01:18.168 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 21:01:18.168 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 375 ms to get response, and 405 ms overall
17-03-17 21:01:18.208 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:18.208 -07 000000476 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:01:18.218 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:01:18.218 -07 000000012 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:18.218 -07 000000012 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:01:18.218 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 405 ms, distance = 0.844 mm, average velocity = 2.083 mm/sec
17-03-17 21:01:19.168 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:19.168 -07 000000618 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:01:19.178 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:19.178 -07 000000012 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:19.198 -07 000000012 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:19.198 -07 000000012 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:01:19.198 -07 000000012 INF: Y Motor: Moved to 71.5190 after 1436 ms (table move)
17-03-17 21:01:19.198 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130323 mm (DAC = 28469)
17-03-17 21:01:19.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.198 -07 000000618 INF: FPGA: Recv ZSGSRD 29582
17-03-17 21:01:19.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:01:19.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.208 -07 000000547 INF: FPGA: Recv ZSGSRD 29577
17-03-17 21:01:19.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:19.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.218 -07 000000502 INF: FPGA: Recv ZSGSRD 29580
17-03-17 21:01:19.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:01:19.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.228 -07 000000618 INF: FPGA: Recv ZSGSRD 29573
17-03-17 21:01:19.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.238 -07 000000547 INF: FPGA: Recv ZSGSRD 29578
17-03-17 21:01:19.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.248 -07 000000382 INF: FPGA: Recv ZSGSRD 29577
17-03-17 21:01:19.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:19.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.258 -07 000000547 INF: FPGA: Recv ZSGSRD 29581
17-03-17 21:01:19.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.268 -07 000000512 INF: FPGA: Recv ZSGSRD 29568
17-03-17 21:01:19.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.278 -07 000000626 INF: FPGA: Recv ZSGSRD 29580
17-03-17 21:01:19.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.288 -07 000000547 INF: FPGA: Recv ZSGSRD 29575
17-03-17 21:01:19.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.298 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:19.298 -07 000000626 INF: FPGA: Recv ZPIEZORD 25313
17-03-17 21:01:19.308 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.308 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.344 V. Piezo Error = -9.4 V.
17-03-17 21:01:19.308 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29577 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29578 (-129.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29568 (-129.5 uncal um), Max = 29582 (-129.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:01:19.308 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29577, posNoise = 5, negNoise = 9
17-03-17 21:01:19.308 -07 000000610 INF: Z Motor: After move to -0.130323, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:19.308 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 106 ms (allowed 150 ms), total time = 1544 ms
17-03-17 21:01:19.308 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:19.358 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-17 21:01:19.358 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:19.358 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.130332274527999. ----------
17-03-17 21:01:19.358 -07 000000610 INF: Cycle	45	Tile	15	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:19.358 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28293, sync = True, waitForSettling = True)
17-03-17 21:01:19.358 -07 000000610 INF: Z Motor: Moving to -0.129517 mm, started at -0.130332 mm, distance = 0.82 um
17-03-17 21:01:19.358 -07 000000610 INF: FPGA: Xmit ZDACW 28293\n [Z Motor]
17-03-17 21:01:19.358 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:01:19.368 -07 000000610 INF: FPGA: 'ZDACW 28293' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:01:19.368 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:19.368 -07 000000547 INF: FPGA: Recv ZDACR 28293
17-03-17 21:01:19.378 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.378 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:19.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.528 -07 000000626 INF: FPGA: Recv ZSGSRD 29444
17-03-17 21:01:19.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:19.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.538 -07 000000476 INF: FPGA: Recv ZSGSRD 29445
17-03-17 21:01:19.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.548 -07 000000547 INF: FPGA: Recv ZSGSRD 29447
17-03-17 21:01:19.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.558 -07 000000502 INF: FPGA: Recv ZSGSRD 29454
17-03-17 21:01:19.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.568 -07 000000626 INF: FPGA: Recv ZSGSRD 29447
17-03-17 21:01:19.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.578 -07 000000618 INF: FPGA: Recv ZSGSRD 29453
17-03-17 21:01:19.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.588 -07 000000382 INF: FPGA: Recv ZSGSRD 29452
17-03-17 21:01:19.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.598 -07 000000476 INF: FPGA: Recv ZSGSRD 29446
17-03-17 21:01:19.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.608 -07 000000382 INF: FPGA: Recv ZSGSRD 29447
17-03-17 21:01:19.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:19.618 -07 000000547 INF: FPGA: Recv ZSGSRD 29453
17-03-17 21:01:19.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.628 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:19.628 -07 000000547 INF: FPGA: Recv ZPIEZORD 25161
17-03-17 21:01:19.638 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:19.638 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.317 V. Piezo Error = -9.4 V.
17-03-17 21:01:19.638 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29449 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29447 (-128.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29444 (-128.7 uncal um), Max = 29454 (-128.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:01:19.638 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29449, posNoise = 5, negNoise = 5
17-03-17 21:01:19.638 -07 000000610 INF: Z Motor: After move to -0.129517, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:19.638 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:01:19.638 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:19.638 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:19.638 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:19.638 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:19.638 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:19.638 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:19.638 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:19.638 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:19.638 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:19.638 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:19.638 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:19.638 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:19.638 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:01:19.638 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:19.648 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:19.648 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:19.658 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:01:19.658 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:01:19.658 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:01:19.658 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:01:19.668 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28469 150\n [Camera]
17-03-17 21:01:19.798 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 4.007176,
17-03-17 21:01:19.868 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:20.288 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:20.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:20.288 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:20.288 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:20.288 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:01:20.288 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:20.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:20.298 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:20.298 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:20.298 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:01:20.478 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28469 808
17-03-17 21:01:20.628 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:20.668 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:01:20.668 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:01:20.668 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:20.678 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:20.678 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:01:20.678 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 21:01:20.678 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 21:01:20.678 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:20.678 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:20.688 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:01:20.828 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:20.838 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:20.838 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:20.958 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:20.958 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:20.958 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:20.968 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:20.968 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:01:20.968 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:20.968 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:01:21.028 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:01:21.028 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:21.028 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28469 150' command took 2 ms to send, 1351 ms to get response, and 1361 ms overall
17-03-17 21:01:21.028 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:01:21.028 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.129509975373853. ------
17-03-17 21:01:21.028 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13582 mm
17-03-17 21:01:21.028 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:21.028 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:01:21.038 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 29669, sync = True, waitForSettling = False)
17-03-17 21:01:21.038 -07 000000382 INF: Z Motor: Moving to -0.135816 mm, started at -0.129510 mm, distance = -6.31 um
17-03-17 21:01:21.038 -07 000000382 INF: FPGA: Xmit ZDACW 29669\n [Z Motor]
17-03-17 21:01:21.038 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 21:01:21.038 -07 000000626 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-17 21:01:21.048 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:21.338 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:01:21.338 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:01:21.338 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:21.338 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:01:21.338 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:01:21.338 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:21.348 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:21.348 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:21.348 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 511 ms.
17-03-17 21:01:21.358 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:01:21.358 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:01:21.358 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:01:21.358 -07 000000512 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:01:21.358 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 304 ms to get response, and 322 ms overall
17-03-17 21:01:21.358 -07 000000626 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:21.358 -07 000000626 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:21.358 -07 000000626 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:01:21.358 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 324 ms to get response, and 326 ms overall
17-03-17 21:01:21.358 -07 000000382 INF: FPGA: 'ZDACW 29669' command took 0 ms to send, 314 ms to get response, and 323 ms overall
17-03-17 21:01:21.358 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:21.368 -07 000000012 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:01:21.378 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:21.378 -07 000000512 INF: FPGA: Recv ZDACR 29669
17-03-17 21:01:21.388 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 21:01:21.388 -07 000000382 INF: Z Motor: MoveAbsStepped took 349 ms (did NOT wait for settling yet))
17-03-17 21:01:21.568 -07 000000618 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:01:21.568 -07 000000012 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 206 ms overall
17-03-17 21:01:21.738 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 21:01:21.738 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 374 ms to get response, and 378 ms overall
17-03-17 21:01:21.778 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:21.778 -07 000000382 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:01:21.788 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:01:21.788 -07 000000626 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:21.788 -07 000000626 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:01:21.788 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.232 mm/sec
17-03-17 21:01:21.838 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:21.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:22.738 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:22.738 -07 000000012 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:01:22.748 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:22.748 -07 000000626 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:22.768 -07 000000626 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:22.768 -07 000000626 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:01:22.768 -07 000000626 INF: Y Motor: Moved to 72.3496 after 1731 ms (table move)
17-03-17 21:01:22.768 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135816 mm (DAC = 29669)
17-03-17 21:01:22.768 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.778 -07 000000626 INF: FPGA: Recv ZSGSRD 30433
17-03-17 21:01:22.778 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:01:22.778 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.778 -07 000000012 INF: FPGA: Recv ZSGSRD 30443
17-03-17 21:01:22.788 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.788 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.788 -07 000000012 INF: FPGA: Recv ZSGSRD 30425
17-03-17 21:01:22.798 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.798 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.798 -07 000000012 INF: FPGA: Recv ZSGSRD 30431
17-03-17 21:01:22.808 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.808 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.808 -07 000000626 INF: FPGA: Recv ZSGSRD 30429
17-03-17 21:01:22.818 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.818 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.818 -07 000000012 INF: FPGA: Recv ZSGSRD 30428
17-03-17 21:01:22.828 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.828 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.828 -07 000000626 INF: FPGA: Recv ZSGSRD 30427
17-03-17 21:01:22.838 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.838 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.838 -07 000000512 INF: FPGA: Recv ZSGSRD 30426
17-03-17 21:01:22.848 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.848 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.848 -07 000000382 INF: FPGA: Recv ZSGSRD 30441
17-03-17 21:01:22.858 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.858 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:22.858 -07 000000012 INF: FPGA: Recv ZSGSRD 30433
17-03-17 21:01:22.868 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.868 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:22.868 -07 000000382 INF: FPGA: Recv ZPIEZORD 26462
17-03-17 21:01:22.878 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:22.878 -07 000000502 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 45.3 V, since DAC is at 4.527 V. Piezo Error = -8.7 V.
17-03-17 21:01:22.878 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.8 um, Read 10 ADC samples: Avg = 30432 (-135.0 uncal um), Error = 0.8 uncal um, Median = 30430 (-135.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 30425 (-135.0 uncal um), Max = 30443 (-135.1 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:01:22.878 -07 000000502 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30432, posNoise = 11, negNoise = 7
17-03-17 21:01:22.878 -07 000000502 INF: Z Motor: After move to -0.135816, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:22.878 -07 000000502 INF: Z Motor: Settle wait time = 1735 ms, measure time = 104 ms (allowed 150 ms), total time = 1839 ms
17-03-17 21:01:22.878 -07 000000502 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:22.928 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1891 ms
17-03-17 21:01:22.928 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:22.928 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:22.928 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:22.928 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:22.928 -07 000000382 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:01:22.928 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:22.928 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:22.928 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:01:22.928 -07 000000382 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:01:22.938 -07 000000382 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:22.938 -07 000000382 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:01:22.948 -07 000000382 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 21:01:22.948 -07 000000382 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 21:01:22.948 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:01:22.998 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:01:23.188 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:01:23.188 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:01:23.198 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:01:23.198 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-17 21:01:23.228 -07 000000618 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:01:23.238 -07 000000012 INF: FPGA: Recv CAMSNAP
17-03-17 21:01:23.238 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 285 ms overall
17-03-17 21:01:23.318 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:01:23.318 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:23.328 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:01:23.328 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:01:23.338 -07 000000512 INF: Autofocus start
17-03-17 21:01:23.338 -07 000000512 INF: MeasureProfile start
17-03-17 21:01:23.338 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:01:23.338 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:01:23.348 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:01:23.348 -07 000000429 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:01:23.348 -07 000000512 INF: MeasureProfile done
17-03-17 21:01:23.348 -07 000000512 INF: X=-64  Z correction [um]=-0.3149434
17-03-17 21:01:23.348 -07 000000512 INF: Autofocus finished
17-03-17 21:01:23.548 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:01:23.548 -07 000000429 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:01:23.548 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.135824975909204. ----------
17-03-17 21:01:23.548 -07 000000610 INF: Cycle	45	Tile	16	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:23.558 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28113, sync = True, waitForSettling = True)
17-03-17 21:01:23.558 -07 000000610 INF: Z Motor: Moving to -0.128693 mm, started at -0.135825 mm, distance = 7.13 um
17-03-17 21:01:23.558 -07 000000610 INF: FPGA: Xmit ZDACW 28113\n [Z Motor]
17-03-17 21:01:23.558 -07 000000502 INF: FPGA: Recv ZDACW
17-03-17 21:01:23.568 -07 000000610 INF: FPGA: 'ZDACW 28113' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.568 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:23.568 -07 000000012 INF: FPGA: Recv ZDACR 28113
17-03-17 21:01:23.578 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.578 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:23.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.728 -07 000000429 INF: FPGA: Recv ZSGSRD 29321
17-03-17 21:01:23.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:23.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.738 -07 000000626 INF: FPGA: Recv ZSGSRD 29324
17-03-17 21:01:23.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.748 -07 000000502 INF: FPGA: Recv ZSGSRD 29327
17-03-17 21:01:23.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.758 -07 000000012 INF: FPGA: Recv ZSGSRD 29323
17-03-17 21:01:23.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.768 -07 000000429 INF: FPGA: Recv ZSGSRD 29325
17-03-17 21:01:23.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.778 -07 000000382 INF: FPGA: Recv ZSGSRD 29325
17-03-17 21:01:23.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.788 -07 000000433 INF: FPGA: Recv ZSGSRD 29322
17-03-17 21:01:23.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.798 -07 000000618 INF: FPGA: Recv ZSGSRD 29321
17-03-17 21:01:23.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.808 -07 000000502 INF: FPGA: Recv ZSGSRD 29321
17-03-17 21:01:23.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:23.818 -07 000000512 INF: FPGA: Recv ZSGSRD 29314
17-03-17 21:01:23.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.828 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:23.828 -07 000000433 INF: FPGA: Recv ZPIEZORD 25031
17-03-17 21:01:23.838 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:23.838 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.290 V. Piezo Error = -9.4 V.
17-03-17 21:01:23.838 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29322 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29322 (-127.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29314 (-127.9 uncal um), Max = 29327 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:01:23.838 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29322, posNoise = 5, negNoise = 8
17-03-17 21:01:23.838 -07 000000610 INF: Z Motor: After move to -0.128693, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:23.838 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 21:01:23.838 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:23.838 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:23.838 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:23.838 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:23.838 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:23.838 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:23.838 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:23.838 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:23.838 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:23.838 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:23.838 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:23.838 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:23.838 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:01:23.838 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:23.838 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:01:23.848 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:23.848 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:01:23.848 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:01:23.858 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:01:23.858 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:01:23.858 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28289 150\n [Camera]
17-03-17 21:01:24.058 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:24.478 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:24.478 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:24.478 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:24.488 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:24.488 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:24.488 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:24.488 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:01:24.488 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:24.618 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:24.618 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-17 21:01:24.668 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28289 808
17-03-17 21:01:24.818 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:24.868 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:01:24.868 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:01:24.868 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:24.868 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:01:24.868 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:01:24.988 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 21:01:24.988 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 21:01:24.988 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:24.988 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:24.998 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms.
17-03-17 21:01:25.028 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:25.028 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:25.028 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:25.028 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:25.028 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:25.028 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:25.028 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:25.028 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:01:25.038 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:25.038 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) start.
17-03-17 21:01:25.158 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.990831,
17-03-17 21:01:25.218 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1354
17-03-17 21:01:25.218 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:25.218 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28289 150' command took 2 ms to send, 1355 ms to get response, and 1362 ms overall
17-03-17 21:01:25.218 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.129179
17-03-17 21:01:25.218 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12918 mm
17-03-17 21:01:25.218 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:25.228 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 21:01:25.228 -07 000000438 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-17 21:01:25.228 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:25.228 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 28219, sync = True, waitForSettling = False)
17-03-17 21:01:25.228 -07 000000626 INF: Z Motor: Moving to -0.129178 mm, started at -0.128694 mm, distance = -0.48 um
17-03-17 21:01:25.228 -07 000000547 INF: FPGA: Recv YRDPOS 148173
17-03-17 21:01:25.238 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:25.238 -07 000000438 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:25.238 -07 000000626 INF: FPGA: Xmit ZDACW 28219\n [Z Motor]
17-03-17 21:01:25.238 -07 000000502 INF: FPGA: Recv ZDACW
17-03-17 21:01:25.238 -07 000000438 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:25.238 -07 000000438 INF: Y Motor: Moving 1348 steps-27
17-03-17 21:01:25.248 -07 000000626 INF: FPGA: 'ZDACW 28219' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 21:01:25.248 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:25.248 -07 000000431 INF: FPGA: Recv ZDACR 28219
17-03-17 21:01:25.258 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:25.258 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:25.258 -07 000000626 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 21:01:25.408 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1458343128, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:01:25.408 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:01:25.408 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:25.408 -07 000000433 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:01:25.408 -07 000000433 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:01:25.408 -07 000000433 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:25.408 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:25.418 -07 000000433 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 21:01:25.418 -07 000000433 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:01:25.418 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:01:25.628 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 21:01:25.628 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-17 21:01:25.668 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:25.668 -07 000000012 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:01:25.678 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:25.678 -07 000000438 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:25.678 -07 000000438 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 21:01:25.678 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.843 mm, average velocity = 2.145 mm/sec
17-03-17 21:01:26.628 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:26.628 -07 000000512 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:01:26.638 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.638 -07 000000438 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:26.658 -07 000000438 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:26.658 -07 000000438 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:01:26.658 -07 000000438 INF: Y Motor: Moved to 73.1763 after 1433 ms (table move)
17-03-17 21:01:26.658 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129178 mm (DAC = 28219)
17-03-17 21:01:26.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.658 -07 000000012 INF: FPGA: Recv ZSGSRD 29395
17-03-17 21:01:26.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:26.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.668 -07 000000438 INF: FPGA: Recv ZSGSRD 29386
17-03-17 21:01:26.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.678 -07 000000382 INF: FPGA: Recv ZSGSRD 29393
17-03-17 21:01:26.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.688 -07 000000438 INF: FPGA: Recv ZSGSRD 29397
17-03-17 21:01:26.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.698 -07 000000618 INF: FPGA: Recv ZSGSRD 29404
17-03-17 21:01:26.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.708 -07 000000438 INF: FPGA: Recv ZSGSRD 29400
17-03-17 21:01:26.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.718 -07 000000382 INF: FPGA: Recv ZSGSRD 29406
17-03-17 21:01:26.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.728 -07 000000438 INF: FPGA: Recv ZSGSRD 29400
17-03-17 21:01:26.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.738 -07 000000382 INF: FPGA: Recv ZSGSRD 29392
17-03-17 21:01:26.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.748 -07 000000438 INF: FPGA: Recv ZSGSRD 29394
17-03-17 21:01:26.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.758 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:26.758 -07 000000382 INF: FPGA: Recv ZPIEZORD 25200
17-03-17 21:01:26.768 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.768 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.306 V. Piezo Error = -9.2 V.
17-03-17 21:01:26.768 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.2 um, Read 10 ADC samples: Avg = 29397 (-128.4 uncal um), Error = 0.8 uncal um, Median = 29396 (-128.4 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 29386 (-128.3 uncal um), Max = 29406 (-128.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:01:26.768 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29397, posNoise = 9, negNoise = 11
17-03-17 21:01:26.768 -07 000000610 INF: Z Motor: After move to -0.129178, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:26.768 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 103 ms (allowed 150 ms), total time = 1537 ms
17-03-17 21:01:26.768 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:26.818 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-17 21:01:26.818 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:26.818 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.129175916342482. ----------
17-03-17 21:01:26.818 -07 000000610 INF: Cycle	45	Tile	17	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:26.818 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28042, sync = True, waitForSettling = True)
17-03-17 21:01:26.818 -07 000000610 INF: Z Motor: Moving to -0.128368 mm, started at -0.129176 mm, distance = 0.81 um
17-03-17 21:01:26.818 -07 000000610 INF: FPGA: Xmit ZDACW 28042\n [Z Motor]
17-03-17 21:01:26.818 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 21:01:26.828 -07 000000610 INF: FPGA: 'ZDACW 28042' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:26.828 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:26.828 -07 000000512 INF: FPGA: Recv ZDACR 28042
17-03-17 21:01:26.838 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.838 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:26.838 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:26.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:26.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.988 -07 000000618 INF: FPGA: Recv ZSGSRD 29267
17-03-17 21:01:26.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:26.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:26.998 -07 000000512 INF: FPGA: Recv ZSGSRD 29271
17-03-17 21:01:27.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.008 -07 000000433 INF: FPGA: Recv ZSGSRD 29274
17-03-17 21:01:27.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.018 -07 000000512 INF: FPGA: Recv ZSGSRD 29281
17-03-17 21:01:27.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.028 -07 000000433 INF: FPGA: Recv ZSGSRD 29271
17-03-17 21:01:27.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.038 -07 000000382 INF: FPGA: Recv ZSGSRD 29272
17-03-17 21:01:27.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.048 -07 000000012 INF: FPGA: Recv ZSGSRD 29273
17-03-17 21:01:27.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.058 -07 000000382 INF: FPGA: Recv ZSGSRD 29269
17-03-17 21:01:27.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.068 -07 000000438 INF: FPGA: Recv ZSGSRD 29270
17-03-17 21:01:27.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:27.078 -07 000000512 INF: FPGA: Recv ZSGSRD 29269
17-03-17 21:01:27.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.088 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:27.088 -07 000000438 INF: FPGA: Recv ZPIEZORD 24996
17-03-17 21:01:27.098 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:27.098 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.279 V. Piezo Error = -9.4 V.
17-03-17 21:01:27.098 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.4 um, Read 10 ADC samples: Avg = 29272 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29271 (-127.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29267 (-127.6 uncal um), Max = 29281 (-127.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:01:27.098 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29272, posNoise = 9, negNoise = 5
17-03-17 21:01:27.098 -07 000000610 INF: Z Motor: After move to -0.128368, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:27.098 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:01:27.098 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:27.098 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:27.098 -07 000000433 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:27.098 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:27.098 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:27.098 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:27.098 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:27.098 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:27.098 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:27.098 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:27.098 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:27.098 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:27.108 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:01:27.108 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:27.108 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:01:27.108 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:27.118 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:01:27.118 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:01:27.118 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:01:27.118 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:01:27.118 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28219 150\n [Camera]
17-03-17 21:01:27.318 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:27.738 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:27.738 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:27.738 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:27.738 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:27.738 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:01:27.738 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:27.738 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:27.748 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:27.748 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:27.748 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:01:27.928 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28219 808
17-03-17 21:01:28.078 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:28.118 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:01:28.118 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:01:28.118 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:28.118 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:01:28.118 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:01:28.128 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:28.128 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:28.128 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:01:28.128 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:28.138 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:01:28.288 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:28.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:28.288 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:28.288 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:28.288 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-17 21:01:28.288 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:28.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:28.288 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:28.288 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:28.288 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:01:28.478 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:01:28.478 -07 000000433 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:28.478 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28219 150' command took 2 ms to send, 1354 ms to get response, and 1360 ms overall
17-03-17 21:01:28.478 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128720
17-03-17 21:01:28.478 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12872 mm
17-03-17 21:01:28.478 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:28.478 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 21:01:28.478 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 28119, sync = True, waitForSettling = False)
17-03-17 21:01:28.478 -07 000000480 INF: Z Motor: Moving to -0.128721 mm, started at -0.128373 mm, distance = -0.35 um
17-03-17 21:01:28.478 -07 000000627 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-17 21:01:28.478 -07 000000480 INF: FPGA: Xmit ZDACW 28119\n [Z Motor]
17-03-17 21:01:28.488 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:28.488 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 21:01:28.488 -07 000000480 INF: FPGA: 'ZDACW 28119' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:01:28.488 -07 000000618 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:01:28.498 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:28.498 -07 000000627 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:28.498 -07 000000627 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:28.498 -07 000000627 INF: Y Motor: Moving 1354 steps-33
17-03-17 21:01:28.498 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:28.498 -07 000000382 INF: FPGA: Recv ZDACR 28119
17-03-17 21:01:28.508 -07 000000480 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:01:28.508 -07 000000480 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 21:01:28.508 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:28.678 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 21:01:28.678 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:01:28.678 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:28.678 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 391 ms.
17-03-17 21:01:28.678 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:01:28.678 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:28.678 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:28.678 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:28.678 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:01:28.688 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 21:01:28.878 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-17 21:01:28.878 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:01:28.908 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:28.918 -07 000000480 INF: FPGA: Recv YRDPOS 151568
17-03-17 21:01:28.918 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:01:28.918 -07 000000627 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:28.918 -07 000000627 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 21:01:28.918 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.846 mm, average velocity = 2.181 mm/sec
17-03-17 21:01:29.868 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:29.868 -07 000000569 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:01:29.878 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:29.878 -07 000000627 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:29.888 -07 000000627 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:29.888 -07 000000627 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:01:29.888 -07 000000627 INF: Y Motor: Moved to 74.0083 after 1408 ms (table move)
17-03-17 21:01:29.898 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128721 mm (DAC = 28119)
17-03-17 21:01:29.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.898 -07 000000512 INF: FPGA: Recv ZSGSRD 29326
17-03-17 21:01:29.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.908 -07 000000618 INF: FPGA: Recv ZSGSRD 29323
17-03-17 21:01:29.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.918 -07 000000512 INF: FPGA: Recv ZSGSRD 29326
17-03-17 21:01:29.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.928 -07 000000433 INF: FPGA: Recv ZSGSRD 29334
17-03-17 21:01:29.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.938 -07 000000547 INF: FPGA: Recv ZSGSRD 29325
17-03-17 21:01:29.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.948 -07 000000618 INF: FPGA: Recv ZSGSRD 29329
17-03-17 21:01:29.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.958 -07 000000512 INF: FPGA: Recv ZSGSRD 29330
17-03-17 21:01:29.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.968 -07 000000618 INF: FPGA: Recv ZSGSRD 29326
17-03-17 21:01:29.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.978 -07 000000512 INF: FPGA: Recv ZSGSRD 29323
17-03-17 21:01:29.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:29.988 -07 000000618 INF: FPGA: Recv ZSGSRD 29322
17-03-17 21:01:29.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:29.998 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:29.998 -07 000000512 INF: FPGA: Recv ZPIEZORD 25079
17-03-17 21:01:30.008 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.008 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.291 V. Piezo Error = -9.3 V.
17-03-17 21:01:30.008 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29326 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29326 (-127.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29322 (-127.9 uncal um), Max = 29334 (-128.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:01:30.008 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29326, posNoise = 8, negNoise = 4
17-03-17 21:01:30.008 -07 000000610 INF: Z Motor: After move to -0.128721, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:30.008 -07 000000610 INF: Z Motor: Settle wait time = 1411 ms, measure time = 110 ms (allowed 150 ms), total time = 1521 ms
17-03-17 21:01:30.008 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:30.048 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1563 ms
17-03-17 21:01:30.048 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:30.048 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128719797280417. ----------
17-03-17 21:01:30.048 -07 000000610 INF: Cycle	45	Tile	18	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:30.048 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27942, sync = True, waitForSettling = True)
17-03-17 21:01:30.048 -07 000000610 INF: Z Motor: Moving to -0.127910 mm, started at -0.128720 mm, distance = 0.81 um
17-03-17 21:01:30.048 -07 000000610 INF: FPGA: Xmit ZDACW 27942\n [Z Motor]
17-03-17 21:01:30.048 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:01:30.058 -07 000000610 INF: FPGA: 'ZDACW 27942' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:01:30.058 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:30.058 -07 000000382 INF: FPGA: Recv ZDACR 27942
17-03-17 21:01:30.068 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.068 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:30.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.218 -07 000000512 INF: FPGA: Recv ZSGSRD 29194
17-03-17 21:01:30.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:30.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.228 -07 000000618 INF: FPGA: Recv ZSGSRD 29201
17-03-17 21:01:30.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.238 -07 000000512 INF: FPGA: Recv ZSGSRD 29206
17-03-17 21:01:30.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.248 -07 000000618 INF: FPGA: Recv ZSGSRD 29205
17-03-17 21:01:30.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.258 -07 000000547 INF: FPGA: Recv ZSGSRD 29202
17-03-17 21:01:30.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.268 -07 000000627 INF: FPGA: Recv ZSGSRD 29200
17-03-17 21:01:30.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.278 -07 000000547 INF: FPGA: Recv ZSGSRD 29200
17-03-17 21:01:30.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.288 -07 000000382 INF: FPGA: Recv ZSGSRD 29202
17-03-17 21:01:30.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.298 -07 000000431 INF: FPGA: Recv ZSGSRD 29197
17-03-17 21:01:30.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:30.308 -07 000000627 INF: FPGA: Recv ZSGSRD 29197
17-03-17 21:01:30.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.318 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:30.318 -07 000000431 INF: FPGA: Recv ZPIEZORD 24918
17-03-17 21:01:30.328 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:30.328 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.264 V. Piezo Error = -9.4 V.
17-03-17 21:01:30.328 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29200 (-127.1 uncal um), Error = 0.8 uncal um, Median = 29200 (-127.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29194 (-127.1 uncal um), Max = 29206 (-127.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:01:30.328 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29200, posNoise = 6, negNoise = 6
17-03-17 21:01:30.328 -07 000000610 INF: Z Motor: After move to -0.127910, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:30.328 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:01:30.328 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:30.328 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:30.328 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:30.328 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:30.328 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:30.328 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:30.328 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:30.328 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:30.328 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:01:30.328 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:30.328 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:30.328 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:30.328 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:01:30.338 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:30.338 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:01:30.338 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:30.348 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:01:30.348 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:01:30.348 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:01:30.348 -07 000000433 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:01:30.348 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28119 150\n [Camera]
17-03-17 21:01:30.518 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.999021,
17-03-17 21:01:30.548 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:30.978 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:30.978 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:30.978 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:30.978 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:30.978 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:01:30.978 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:30.978 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:30.978 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:30.978 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:30.978 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:01:31.168 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28119 808
17-03-17 21:01:31.318 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:31.358 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:01:31.358 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:01:31.358 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:31.358 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:01:31.358 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:01:31.358 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:31.358 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:31.358 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:01:31.358 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:31.368 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:01:31.518 -07 000000433 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:31.518 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:31.518 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:31.528 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:31.528 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:01:31.528 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:31.528 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:31.528 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:31.528 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:31.528 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:01:31.708 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:01:31.708 -07 000000433 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:31.718 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28119 150' command took 2 ms to send, 1349 ms to get response, and 1360 ms overall
17-03-17 21:01:31.718 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.128314
17-03-17 21:01:31.718 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12831 mm
17-03-17 21:01:31.718 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:01:31.718 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 21:01:31.718 -07 000000618 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-17 21:01:31.718 -07 000000433 INF: Z Motor: Entering MoveAbsStepped (DAC = 28030, sync = True, waitForSettling = False)
17-03-17 21:01:31.718 -07 000000433 INF: Z Motor: Moving to -0.128313 mm, started at -0.127910 mm, distance = -0.40 um
17-03-17 21:01:31.718 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:31.718 -07 000000438 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:01:31.728 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:01:31.728 -07 000000618 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:31.728 -07 000000618 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:01:31.728 -07 000000618 INF: Y Motor: Moving 1351 steps-30
17-03-17 21:01:31.728 -07 000000433 INF: FPGA: Xmit ZDACW 28030\n [Z Motor]
17-03-17 21:01:31.728 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:01:31.738 -07 000000433 INF: FPGA: 'ZDACW 28030' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:01:31.738 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:01:31.748 -07 000000433 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:31.748 -07 000000626 INF: FPGA: Recv ZDACR 28030
17-03-17 21:01:31.758 -07 000000433 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:01:31.758 -07 000000433 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-17 21:01:31.838 -07 000000433 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:01:31.838 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 44. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=18, R2=15, Total=33. Bubbles this run: R1=667, R2=692, Total=1359. Warn if over 250 bubbles per interval.
17-03-17 21:01:31.908 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:01:31.908 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:01:31.908 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:31.908 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:01:31.908 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:01:31.908 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:31.908 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:31.908 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:01:31.908 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:31.918 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:01:32.108 -07 000000433 INF: FPGA: Recv YMVTILE
17-03-17 21:01:32.108 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:01:32.138 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:32.138 -07 000000626 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:01:32.148 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:01:32.148 -07 000000618 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:32.148 -07 000000618 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-17 21:01:32.148 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.176 mm/sec
17-03-17 21:01:33.098 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:01:33.098 -07 000000438 INF: FPGA: Recv YRDPOS 153257
17-03-17 21:01:33.108 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.108 -07 000000618 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:01:33.118 -07 000000618 INF: Y Motor: After move to 74.852608, error = -0.020088, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:01:33.118 -07 000000618 INF: Y Motor: Position error after settling (table move) = -41 encoder counts (-0.020 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:01:33.118 -07 000000618 INF: Y Motor: Moved to 74.8325 after 1401 ms (table move)
17-03-17 21:01:33.118 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128313 mm (DAC = 28030)
17-03-17 21:01:33.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.128 -07 000000576 INF: FPGA: Recv ZSGSRD 29262
17-03-17 21:01:33.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:33.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.138 -07 000000438 INF: FPGA: Recv ZSGSRD 29257
17-03-17 21:01:33.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.148 -07 000000576 INF: FPGA: Recv ZSGSRD 29257
17-03-17 21:01:33.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.158 -07 000000627 INF: FPGA: Recv ZSGSRD 29268
17-03-17 21:01:33.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.168 -07 000000618 INF: FPGA: Recv ZSGSRD 29258
17-03-17 21:01:33.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.178 -07 000000438 INF: FPGA: Recv ZSGSRD 29264
17-03-17 21:01:33.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.188 -07 000000431 INF: FPGA: Recv ZSGSRD 29270
17-03-17 21:01:33.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.198 -07 000000438 INF: FPGA: Recv ZSGSRD 29270
17-03-17 21:01:33.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.208 -07 000000618 INF: FPGA: Recv ZSGSRD 29262
17-03-17 21:01:33.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.218 -07 000000431 INF: FPGA: Recv ZSGSRD 29251
17-03-17 21:01:33.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.228 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:33.228 -07 000000438 INF: FPGA: Recv ZPIEZORD 25013
17-03-17 21:01:33.238 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.238 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.277 V. Piezo Error = -9.3 V.
17-03-17 21:01:33.238 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29262 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29262 (-127.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 29251 (-127.5 uncal um), Max = 29270 (-127.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:01:33.238 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29262, posNoise = 8, negNoise = 11
17-03-17 21:01:33.238 -07 000000610 INF: Z Motor: After move to -0.128313, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:33.238 -07 000000610 INF: Z Motor: Settle wait time = 1404 ms, measure time = 111 ms (allowed 150 ms), total time = 1515 ms
17-03-17 21:01:33.238 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 21:01:33.278 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1557 ms
17-03-17 21:01:33.278 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:01:33.278 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83251953125, Z-position -0.128308647703344. ----------
17-03-17 21:01:33.278 -07 000000610 INF: Cycle	45	Tile	19	Exposure Settings		A	423	G	203	T	203	C	423
17-03-17 21:01:33.278 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27854, sync = True, waitForSettling = True)
17-03-17 21:01:33.278 -07 000000610 INF: Z Motor: Moving to -0.127507 mm, started at -0.128309 mm, distance = 0.80 um
17-03-17 21:01:33.278 -07 000000610 INF: FPGA: Xmit ZDACW 27854\n [Z Motor]
17-03-17 21:01:33.278 -07 000000433 INF: FPGA: Recv ZDACW
17-03-17 21:01:33.288 -07 000000610 INF: FPGA: 'ZDACW 27854' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:01:33.288 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:01:33.288 -07 000000618 INF: FPGA: Recv ZDACR 27854
17-03-17 21:01:33.298 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:01:33.298 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:01:33.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.448 -07 000000627 INF: FPGA: Recv ZSGSRD 29134
17-03-17 21:01:33.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:01:33.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.458 -07 000000431 INF: FPGA: Recv ZSGSRD 29136
17-03-17 21:01:33.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.468 -07 000000576 INF: FPGA: Recv ZSGSRD 29136
17-03-17 21:01:33.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.478 -07 000000626 INF: FPGA: Recv ZSGSRD 29137
17-03-17 21:01:33.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.488 -07 000000576 INF: FPGA: Recv ZSGSRD 29142
17-03-17 21:01:33.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.498 -07 000000431 INF: FPGA: Recv ZSGSRD 29141
17-03-17 21:01:33.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.508 -07 000000576 INF: FPGA: Recv ZSGSRD 29142
17-03-17 21:01:33.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.518 -07 000000626 INF: FPGA: Recv ZSGSRD 29140
17-03-17 21:01:33.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.528 -07 000000576 INF: FPGA: Recv ZSGSRD 29132
17-03-17 21:01:33.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:01:33.538 -07 000000438 INF: FPGA: Recv ZSGSRD 29141
17-03-17 21:01:33.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.548 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:01:33.548 -07 000000576 INF: FPGA: Recv ZPIEZORD 24863
17-03-17 21:01:33.558 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:01:33.558 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.250 V. Piezo Error = -9.4 V.
17-03-17 21:01:33.558 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29138 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29138 (-126.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29132 (-126.7 uncal um), Max = 29142 (-126.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:01:33.558 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29138, posNoise = 4, negNoise = 6
17-03-17 21:01:33.558 -07 000000610 INF: Z Motor: After move to -0.127507, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:01:33.558 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:01:33.558 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:01:33.558 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:01:33.558 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:01:33.558 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:01:33.558 -07 000000433 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:01:33.558 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:01:33.558 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:01:33.558 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:01:33.558 -07 000000433 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:01:33.558 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:01:33.558 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:01:33.558 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:01:33.568 -07 000000433 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:01:33.568 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:01:33.568 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:01:33.568 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:01:33.578 -07 000000433 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:01:33.578 -07 000000433 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:01:33.578 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:01:33.578 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:01:33.588 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 423 423 203 203 28030 150\n [Camera]
17-03-17 21:01:33.778 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:01:34.208 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 615
17-03-17 21:01:34.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 615
17-03-17 21:01:34.208 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:34.208 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:34.208 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 21:01:34.208 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 615
17-03-17 21:01:34.208 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 615
17-03-17 21:01:34.208 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:34.208 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:34.208 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 21:01:34.398 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28030 808
17-03-17 21:01:34.548 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 958
17-03-17 21:01:34.608 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 398 ms.
17-03-17 21:01:34.608 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 21:01:34.608 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:34.608 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:34.608 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-17 21:01:34.608 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 21:01:34.608 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:01:34.608 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:34.618 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:01:34.618 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-17 21:01:34.748 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1161
17-03-17 21:01:34.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1161
17-03-17 21:01:34.748 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:01:34.758 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:01:34.758 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 21:01:34.758 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1161
17-03-17 21:01:34.758 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1161
17-03-17 21:01:34.758 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:01:34.758 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:01:34.758 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:01:34.948 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1353
17-03-17 21:01:34.948 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:01:34.948 -07 000000610 INF: FPGA: 'CAMDBLSNAP 423 423 203 203 28030 150' command took 2 ms to send, 1350 ms to get response, and 1360 ms overall
17-03-17 21:01:35.138 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:01:35.138 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:01:35.138 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:35.138 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:01:35.138 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:01:35.138 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:01:35.138 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:35.138 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:01:35.138 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:01:35.138 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 21:01:35.148 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:01:35.178 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-17 21:01:35.178 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 21:01:35.228 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-17 21:01:35.368 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-17 21:01:35.368 -07 000000610 INF: Imaging Cycle 45: ScanTilesCommand Cycle 45 time end. Duration was 146725 ms.
17-03-17 21:01:35.368 -07 000000610 INF: =================== Cycle #45 ===================
17-03-17 21:01:35.368 -07 000000610 INF: ===================  ===================
17-03-17 21:01:35.368 -07 000000433 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 21:01:35.378 -07 000000476 INF: FPGA: Recv EXLED1ADCR 24
17-03-17 21:01:35.378 -07 000000433 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:01:35.378 -07 000000433 INF: GreenLED: Using Green data: Photodiode ADC 24 --> 0.0 mW (old method), or 1.7 mW (new method). Difference = 1.7 mW
17-03-17 21:01:35.378 -07 000000433 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 45, FrontChillerTemperature: 3.999021, FrontChillerHeatSinkTemperature: 0.388453, AmbientTemperature: 19.02675, FlowCellCompartmentTemperature: 21.98817, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.90742, GreenLEDSensorTemperature: 25.35382, PhotodiodePowerAdcGreen: 24, PhotodiodePowerMwGreen: 1.744678
17-03-17 21:01:35.408 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.