17-03-17 21:35:05.048 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:05.048 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-17 21:35:05.048 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8325 mm, delta = 0.5481 mm
17-03-17 21:35:05.048 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:35:05.048 -07 000000424 INF: FPGA: Recv YRDPOS 153257
17-03-17 21:35:05.058 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:35:05.058 -07 000000610 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:35:05.058 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-17 21:35:05.058 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-17 21:35:05.058 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-17 21:35:05.168 -07 000000626 INF: FPGA: Recv YMVTO 154377 871
17-03-17 21:35:05.168 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 107 ms to get response, and 116 ms overall
17-03-17 21:35:05.168 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm)
17-03-17 21:35:05.168 -07 000000610 INF: Y Motor: To move from 74.833 to 75.381 (0.548 mm) should take 877 steps, but required 871 steps (0.544 mm). Slippage = -0.004 mm (-0.01%).
17-03-17 21:35:05.168 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.548 mm, average velocity = 4.725 mm/sec
17-03-17 21:35:06.888 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:06.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:08.168 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:35:08.168 -07 000000608 INF: FPGA: Recv YRDPOS 154380
17-03-17 21:35:08.178 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:35:08.178 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:35:08.188 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:35:08.188 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm)
17-03-17 21:35:08.188 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3145 ms
17-03-17 21:35:08.198 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 60° ===================
17-03-17 21:35:08.198 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-17 21:35:08.198 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-17 21:35:08.198 -07 000000458 INF: FPGA: Recv TEC2TEMP 
17-03-17 21:35:08.208 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:35:08.208 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 21:35:08.208 -07 000000438 INF: FPGA: Recv TEC2EN 
17-03-17 21:35:08.218 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:35:08.218 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 60° ===================
17-03-17 21:35:08.218 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:08.218 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:35:08.218 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:08.248 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 21:35:08.248 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-17 21:35:08.248 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 21:35:08.548 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:35:08.568 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 21:35:08.568 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 21:35:08.618 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:08.638 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:35:08.638 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:35:08.738 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:08.738 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 21:35:08.738 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:08.768 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 21:35:08.768 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 21:35:08.768 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:35:08.898 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 21:35:08.938 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:09.928 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.003063,
17-03-17 21:35:11.888 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:11.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:12.068 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:12.098 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:12.518 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:12.548 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:12.968 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:12.998 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:12.998 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 21:35:12.998 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:13.128 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:13.158 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:35:13.158 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:35:13.288 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:13.318 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:35:13.318 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:35:13.318 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:35:13.448 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:35:13.478 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:13.908 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:13.938 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:13.938 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:35:13.938 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:15.158 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:35:15.158 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-17 21:35:15.158 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:15.178 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:35:15.178 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-17 21:35:15.178 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-17 21:35:15.298 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.973092,
17-03-17 21:35:15.318 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:35:15.338 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-17 21:35:15.338 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-17 21:35:15.388 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:15.408 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 21:35:15.408 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:35:15.508 -07 000000610 INF: =================== Cycle #53, Pumping Reagent CMS (4) ===================
17-03-17 21:35:15.508 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 21:35:15.508 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:15.538 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:35:15.538 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:35:15.538 -07 000000610 INF: =================== Cycle #53, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-17 21:35:15.668 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 21:35:15.708 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:16.888 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:16.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:17.148 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:17.178 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:17.598 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:17.628 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:17.628 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 21:35:17.628 -07 000000610 INF: =================== Cycle #53, Pumping Reagent CMS (4) ===================
17-03-17 21:35:17.758 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:17.788 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:35:17.788 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:35:17.918 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:17.948 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:35:17.948 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:35:17.948 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:35:18.078 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:35:18.108 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:18.538 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:18.568 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:18.568 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:35:18.568 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:19.788 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:35:19.788 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:35:19.788 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:19.808 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 21:35:19.808 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-17 21:35:19.808 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-17 21:35:19.958 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:35:19.978 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-17 21:35:19.978 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-17 21:35:20.028 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:20.048 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:35:20.048 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:35:20.148 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:20.148 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 21:35:20.148 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:20.178 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:35:20.178 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:35:20.178 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:35:20.308 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 21:35:20.348 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:20.668 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.005817,
17-03-17 21:35:21.218 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:21.248 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:21.248 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 21:35:21.248 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:21.378 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:21.408 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:35:21.408 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:35:21.538 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:21.568 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:35:21.568 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:35:21.568 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:35:21.698 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:35:21.728 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:21.888 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:21.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:22.158 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:22.188 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:22.188 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:35:22.188 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:22.188 -07 000000569 INF: WaitCommand(10000) start
17-03-17 21:35:22.188 -07 000000608 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:35:22.188 -07 000000608 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 21:35:23.408 -07 000000608 INF: AsyncDelayTimer waited 1215ms
17-03-17 21:35:23.408 -07 000000608 INF: LanePump: Xmit /1?\r
17-03-17 21:35:23.438 -07 000000608 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:35:23.438 -07 000000608 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:35:23.568 -07 000000608 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 21:35:23.608 -07 000000608 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:25.138 -07 000000608 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:25.168 -07 000000608 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:25.588 -07 000000608 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:25.618 -07 000000608 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:25.618 -07 000000608 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 21:35:25.618 -07 000000608 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:35:25.618 -07 000000608 INF: ===================  ===================
17-03-17 21:35:26.038 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.005817,
17-03-17 21:35:26.888 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:26.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:31.408 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.001704,
17-03-17 21:35:31.888 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:31.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:32.198 -07 000000569 INF: WaitCommand(10000) end
17-03-17 21:35:32.198 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:32.198 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-17 21:35:32.198 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:32.238 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 21:35:32.238 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 21:35:32.238 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:35:32.368 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-17 21:35:32.408 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:36.778 -07 000000415 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.030322,
17-03-17 21:35:36.888 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:36.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:38.538 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:38.568 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:38.988 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:39.018 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:39.438 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:39.468 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:39.888 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:39.918 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:40.338 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:40.368 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:40.368 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-17 21:35:40.368 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:40.498 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:40.528 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 21:35:40.528 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 21:35:40.658 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:40.688 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 21:35:40.688 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 21:35:40.688 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:35:40.818 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:35:40.848 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:41.278 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:41.308 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:41.308 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:35:41.308 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:41.888 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:41.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:42.148 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.005817,
17-03-17 21:35:42.528 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:35:42.528 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-17 21:35:42.528 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:42.548 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:35:42.548 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-17 21:35:42.548 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-17 21:35:42.758 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:35:42.778 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-17 21:35:42.778 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-17 21:35:42.828 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:42.848 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 21:35:42.848 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:35:42.948 -07 000000610 INF: =================== Cycle #53, Pumping Reagent IMT (1) ===================
17-03-17 21:35:42.948 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 21:35:42.948 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:42.978 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 21:35:42.978 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 21:35:42.978 -07 000000610 INF: =================== Cycle #53, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-17 21:35:43.108 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 21:35:43.148 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:44.588 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:44.618 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:45.038 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:45.068 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:45.068 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 21:35:45.068 -07 000000610 INF: =================== Cycle #53, Pumping Reagent IMT (1) ===================
17-03-17 21:35:45.198 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:45.228 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 21:35:45.228 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 21:35:45.358 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:45.388 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 21:35:45.388 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 21:35:45.388 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:35:45.518 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:35:45.548 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:45.978 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:46.008 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:46.008 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:35:46.008 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:46.888 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:46.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:47.228 -07 000000610 INF: AsyncDelayTimer waited 1220ms
17-03-17 21:35:47.228 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:35:47.228 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:47.248 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 21:35:47.248 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-17 21:35:47.248 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 21:35:47.478 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:35:47.498 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-17 21:35:47.498 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-17 21:35:47.518 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.043918,
17-03-17 21:35:47.548 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:35:47.568 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:35:47.568 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:35:47.668 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:47.668 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 21:35:47.668 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:47.698 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 21:35:47.698 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 21:35:47.698 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:35:47.828 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 21:35:47.868 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:35:48.738 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:48.768 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:48.768 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-17 21:35:48.768 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:35:48.898 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:48.928 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 21:35:48.928 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 21:35:49.058 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:35:49.088 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 21:35:49.088 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 21:35:49.088 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:35:49.218 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:35:49.248 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:49.678 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:35:49.708 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:35:49.708 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:35:49.708 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:49.708 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 65° ===================
17-03-17 21:35:49.708 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-17 21:35:49.708 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-17 21:35:49.708 -07 000000429 INF: FPGA: Recv TEC2TEMP 
17-03-17 21:35:49.718 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:35:49.718 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 21:35:49.718 -07 000000576 INF: FPGA: Recv TEC2EN 
17-03-17 21:35:49.728 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:35:49.728 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 65° ===================
17-03-17 21:35:49.728 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:35:49.728 -07 000000610 INF: WaitCommand(30000) start
17-03-17 21:35:51.888 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:51.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:52.898 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.033041,
17-03-17 21:35:56.888 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:35:56.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:35:58.258 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.997626,
17-03-17 21:36:01.888 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:01.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:03.628 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.981281,
17-03-17 21:36:06.888 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:06.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:08.998 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.981281,
17-03-17 21:36:11.888 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:11.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:14.368 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.999021,
17-03-17 21:36:16.888 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:16.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:19.738 -07 000000610 INF: WaitCommand(30000) end
17-03-17 21:36:19.738 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.999021,
17-03-17 21:36:19.738 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:36:19.738 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-17 21:36:19.838 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:19.868 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 21:36:19.868 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 21:36:19.868 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:36:19.998 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-17 21:36:20.038 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:20.578 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:20.608 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:20.608 -07 000000610 INF: LanePump: Waited 570 ms for pump motion to complete
17-03-17 21:36:20.608 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:36:20.738 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:20.768 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 21:36:20.768 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 21:36:20.898 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:20.928 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 21:36:20.928 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 21:36:20.928 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:36:21.058 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:36:21.088 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:21.518 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:21.548 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:21.548 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:36:21.548 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:36:21.548 -07 000000512 INF: WaitCommand(30000) start
17-03-17 21:36:21.548 -07 000000382 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:36:21.548 -07 000000382 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 21:36:21.888 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:21.888 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:22.768 -07 000000382 INF: AsyncDelayTimer waited 1216ms
17-03-17 21:36:22.768 -07 000000382 INF: LanePump: Xmit /1?\r
17-03-17 21:36:22.798 -07 000000382 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 21:36:22.798 -07 000000382 INF: LanePump: Current Position of Pump is: 1920
17-03-17 21:36:22.928 -07 000000382 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 21:36:22.968 -07 000000382 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:25.118 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.026244,
17-03-17 21:36:25.308 -07 000000382 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:25.338 -07 000000382 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:25.758 -07 000000382 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:25.788 -07 000000382 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:25.788 -07 000000382 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-17 21:36:25.788 -07 000000382 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:36:25.788 -07 000000382 INF: ===================  ===================
17-03-17 21:36:26.888 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:26.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:30.478 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.020806,
17-03-17 21:36:31.888 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:35.848 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.001704,
17-03-17 21:36:36.888 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:41.218 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.981281,
17-03-17 21:36:41.888 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:46.588 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.999021,
17-03-17 21:36:46.898 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:51.558 -07 000000512 INF: WaitCommand(30000) end
17-03-17 21:36:51.558 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 22° ===================
17-03-17 21:36:51.558 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-17 21:36:51.558 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-17 21:36:51.568 -07 000000438 INF: FPGA: Recv TEC2TEMP 
17-03-17 21:36:51.568 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:36:51.568 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 21:36:51.568 -07 000000012 INF: FPGA: Recv TEC2EN 
17-03-17 21:36:51.578 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:36:51.578 -07 000000610 INF: =================== Cycle #53, Flow Cell Temp 22° ===================
17-03-17 21:36:51.578 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:36:51.578 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:36:51.578 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 21:36:51.578 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:51.608 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 21:36:51.608 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 21:36:51.608 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:36:51.738 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 21:36:51.778 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:51.898 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:51.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:51.958 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.031682,
17-03-17 21:36:54.908 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:54.938 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:55.358 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:55.388 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:55.808 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:55.838 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:55.838 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 21:36:55.838 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:36:55.968 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:55.998 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:36:55.998 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:36:56.128 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:56.158 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:36:56.158 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:36:56.158 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:36:56.288 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:36:56.318 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:56.748 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:36:56.778 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:36:56.778 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:36:56.778 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:36:56.898 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:36:56.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:36:57.328 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.018051,
17-03-17 21:36:57.998 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-17 21:36:57.998 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-17 21:36:57.998 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:36:58.018 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:36:58.018 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-17 21:36:58.018 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-17 21:36:58.168 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:36:58.188 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 21:36:58.188 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 21:36:58.238 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:36:58.258 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 21:36:58.258 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:36:58.358 -07 000000610 INF: =================== Cycle #53, Pumping Reagent USM (2) ===================
17-03-17 21:36:58.358 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 21:36:58.358 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:36:58.388 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:36:58.388 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:36:58.388 -07 000000610 INF: =================== Cycle #53, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-17 21:36:58.518 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 21:36:58.558 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:36:59.998 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:00.028 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:37:00.448 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:00.478 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:00.478 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-17 21:37:00.478 -07 000000610 INF: =================== Cycle #53, Pumping Reagent USM (2) ===================
17-03-17 21:37:00.608 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:37:00.638 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:37:00.638 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:37:00.768 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:37:00.798 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:37:00.798 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:37:00.798 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:37:00.928 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:37:00.958 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:01.388 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:01.418 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:01.418 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:37:01.418 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:37:01.898 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:01.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:02.638 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-17 21:37:02.638 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:37:02.638 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:37:02.658 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 21:37:02.658 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-17 21:37:02.658 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 21:37:02.698 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.997626,
17-03-17 21:37:02.808 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:37:02.828 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 21:37:02.828 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 21:37:02.878 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:37:02.898 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:37:02.898 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:37:02.998 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:37:02.998 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 21:37:02.998 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:37:03.028 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:37:03.028 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:37:03.028 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:37:03.158 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 21:37:03.198 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:37:04.068 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:04.098 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:04.098 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 21:37:04.098 -07 000000610 INF: =================== Cycle #53, Pumping Reagent PR2 (3) ===================
17-03-17 21:37:04.228 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:37:04.258 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:37:04.258 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:37:04.388 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:37:04.418 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:37:04.418 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:37:04.418 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:37:04.548 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:37:04.578 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:05.008 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:05.038 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:05.038 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:37:05.038 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:37:05.038 -07 000000424 INF: WaitCommand(10000) start
17-03-17 21:37:05.038 -07 000000626 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:37:05.038 -07 000000626 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 21:37:06.258 -07 000000626 INF: AsyncDelayTimer waited 1216ms
17-03-17 21:37:06.258 -07 000000626 INF: LanePump: Xmit /1?\r
17-03-17 21:37:06.288 -07 000000626 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:37:06.288 -07 000000626 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:37:06.418 -07 000000626 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 21:37:06.458 -07 000000626 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:37:06.898 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:06.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:07.988 -07 000000626 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:08.018 -07 000000626 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:37:08.068 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.993549,
17-03-17 21:37:08.438 -07 000000626 INF: LanePump: Xmit /1Q\r
17-03-17 21:37:08.468 -07 000000626 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:37:08.468 -07 000000626 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 21:37:08.468 -07 000000626 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:37:08.468 -07 000000626 INF: ===================  ===================
17-03-17 21:37:11.898 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:11.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:13.438 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.98264,
17-03-17 21:37:15.048 -07 000000424 INF: WaitCommand(10000) end
17-03-17 21:37:15.048 -07 000000610 INF: =================== Cycle #53, Imaging ===================
17-03-17 21:37:15.048 -07 000000610 INF: Imaging Cycle 53: ScanTilesCommand Cycle 53 time start.
17-03-17 21:37:15.048 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-17 21:37:15.048 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:37:15.078 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:37:15.078 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-17 21:37:15.078 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-17 21:37:15.378 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:37:15.398 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 21:37:15.398 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 21:37:15.448 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:37:15.468 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 21:37:15.468 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:15.468 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:15.468 -07 000000429 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-17 21:37:15.468 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:15.468 -07 000000429 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-17 21:37:15.468 -07 000000576 INF: FPGA: Recv EXLED1ON 
17-03-17 21:37:15.478 -07 000000429 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:37:15.478 -07 000000429 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-17 21:37:15.478 -07 000000431 INF: FPGA: Recv EXLED1ADCR 23133
17-03-17 21:37:15.488 -07 000000429 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:15.488 -07 000000429 INF: RedLED: Using Red data: Photodiode ADC 23133 --> 7.4 mW (old method), or 205.0 mW (new method). Difference = 197.6 mW
17-03-17 21:37:15.488 -07 000000429 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-17 21:37:15.488 -07 000000626 INF: FPGA: Recv EXLED1OFF 
17-03-17 21:37:15.498 -07 000000429 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:15.498 -07 000000429 INF: RedLED: LED was on for 20 ms
17-03-17 21:37:15.498 -07 000000429 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-17 21:37:15.498 -07 000000429 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-17 21:37:15.498 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:15.498 -07 000000429 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-17 21:37:15.498 -07 000000576 INF: FPGA: Recv EXLED2ON 
17-03-17 21:37:15.508 -07 000000429 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:37:15.508 -07 000000429 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 21:37:15.508 -07 000000480 INF: FPGA: Recv EXLED1ADCR 2099
17-03-17 21:37:15.518 -07 000000429 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:15.518 -07 000000429 INF: GreenLED: Using Green data: Photodiode ADC 2099 --> 0.9 mW (old method), or 182.4 mW (new method). Difference = 181.5 mW
17-03-17 21:37:15.518 -07 000000429 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-17 21:37:15.518 -07 000000459 INF: FPGA: Recv EXLED2OFF 
17-03-17 21:37:15.528 -07 000000429 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:15.528 -07 000000429 INF: GreenLED: LED was on for 19 ms
17-03-17 21:37:15.528 -07 000000429 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-17 21:37:15.528 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 21:37:15.528 -07 000000438 INF: FPGA: Recv EMCUR 
17-03-17 21:37:15.538 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:15.538 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-17 21:37:16.038 -07 000000608 INF: FPGA: Recv EMOUT
17-03-17 21:37:16.038 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 21:37:16.038 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-17 21:37:16.038 -07 000000576 INF: FPGA: Recv EMCUR 
17-03-17 21:37:16.048 -07 000000610 INF: FPGA: 'EMCUR 75' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:16.048 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:37:16.048 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.127640529640601. ------
17-03-17 21:37:16.048 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:16.048 -07 000000627 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17960 mm
17-03-17 21:37:16.048 -07 000000627 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:16.048 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 21:37:16.048 -07 000000608 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm
17-03-17 21:37:16.048 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 39234, sync = True, waitForSettling = False)
17-03-17 21:37:16.048 -07 000000476 INF: Z Motor: Moving to -0.179602 mm, started at -0.127641 mm, distance = -51.96 um
17-03-17 21:37:16.058 -07 000000476 INF: FPGA: Xmit ZDACW 39234\n [Z Motor]
17-03-17 21:37:16.058 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:16.058 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 6 ms overall
17-03-17 21:37:16.058 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:37:16.068 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:16.068 -07 000000476 INF: FPGA: 'ZDACW 39234' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:37:16.068 -07 000000626 INF: FPGA: Recv YRDPOS 154379
17-03-17 21:37:16.078 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:37:16.078 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 21:37:16.078 -07 000000608 INF: Y Motor: Encoder = 154379 = motor step 120608.6 = 75.3804 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:16.078 -07 000000608 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-17 21:37:16.078 -07 000000608 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 21:37:16.088 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:16.088 -07 000000512 INF: FPGA: Recv ZDACR 39234
17-03-17 21:37:16.098 -07 000000608 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 21:37:16.098 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:37:16.098 -07 000000476 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-17 21:37:16.278 -07 000000512 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:37:16.278 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 220 ms overall
17-03-17 21:37:16.898 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:16.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:17.778 -07 000000438 INF: FPGA: Recv YMVTO 122703 24775
17-03-17 21:37:17.778 -07 000000608 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1675 ms to get response, and 1702 ms overall
17-03-17 21:37:17.778 -07 000000608 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 21:37:17.778 -07 000000608 INF: Y Motor: To move from 75.380 to 59.913 (-15.468 mm) should take 24748 steps, but required 24775 steps (15.484 mm). Slippage = 0.017 mm (0.00%).
17-03-17 21:37:17.778 -07 000000608 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1703 ms, distance = 15.468 mm, average velocity = 9.083 mm/sec
17-03-17 21:37:18.808 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.014009,
17-03-17 21:37:20.628 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:20.628 -07 000000576 INF: FPGA: Recv YRDPOS 122697
17-03-17 21:37:20.638 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:20.638 -07 000000608 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:20.658 -07 000000608 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:20.658 -07 000000608 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-17 21:37:20.658 -07 000000608 INF: Y Motor: Moved to 59.9106 after 4607 ms
17-03-17 21:37:20.658 -07 000000627 INF: Z Motor: EndOfMoveAbsStepped: target = -0.179602 mm (DAC = 39234)
17-03-17 21:37:20.658 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.668 -07 000000476 INF: FPGA: Recv ZSGSRD 37245
17-03-17 21:37:20.668 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:37:20.668 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.668 -07 000000501 INF: FPGA: Recv ZSGSRD 37249
17-03-17 21:37:20.678 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:37:20.678 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.678 -07 000000459 INF: FPGA: Recv ZSGSRD 37250
17-03-17 21:37:20.688 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.688 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.688 -07 000000438 INF: FPGA: Recv ZSGSRD 37243
17-03-17 21:37:20.698 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.698 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.698 -07 000000547 INF: FPGA: Recv ZSGSRD 37250
17-03-17 21:37:20.708 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.708 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.708 -07 000000476 INF: FPGA: Recv ZSGSRD 37249
17-03-17 21:37:20.718 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.718 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.718 -07 000000012 INF: FPGA: Recv ZSGSRD 37246
17-03-17 21:37:20.728 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.728 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.728 -07 000000459 INF: FPGA: Recv ZSGSRD 37249
17-03-17 21:37:20.738 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.738 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.738 -07 000000547 INF: FPGA: Recv ZSGSRD 37241
17-03-17 21:37:20.748 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.748 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:20.748 -07 000000501 INF: FPGA: Recv ZSGSRD 37245
17-03-17 21:37:20.758 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.758 -07 000000627 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:20.758 -07 000000458 INF: FPGA: Recv ZPIEZORD 33708
17-03-17 21:37:20.768 -07 000000627 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:20.768 -07 000000627 INF: Z Motor: Piezo is near 52.0 V (nominally 0 to 100 V), expect near 59.9 V, since DAC is at 5.987 V. Piezo Error = -7.9 V.
17-03-17 21:37:20.768 -07 000000627 INF: Z Motor: ReadAdcAverage: Commanded Z = -179.6 um, Read 10 ADC samples: Avg = 37247 (-178.7 uncal um), Error = 0.9 uncal um, Median = 37248 (-178.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 37241 (-178.7 uncal um), Max = 37250 (-178.7 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:37:20.768 -07 000000627 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37247, posNoise = 3, negNoise = 6
17-03-17 21:37:20.768 -07 000000627 INF: Z Motor: After move to -0.179602, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:20.768 -07 000000627 INF: Z Motor: Settle wait time = 4610 ms, measure time = 102 ms (allowed 150 ms), total time = 4712 ms
17-03-17 21:37:20.768 -07 000000627 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:20.818 -07 000000627 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4765 ms
17-03-17 21:37:20.818 -07 000000627 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:20.818 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:20.818 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:20.818 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:20.818 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:20.818 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:37:20.818 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:20.818 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:20.818 -07 000000501 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 21:37:20.848 -07 000000501 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 21:37:20.848 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:37:20.848 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 5 ms.
17-03-17 21:37:20.848 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:37:20.868 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:37:20.868 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 44 ms.
17-03-17 21:37:20.868 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:37:20.908 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:37:21.108 -07 000000382 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:37:21.108 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:37:21.108 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:37:21.118 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2147487792, 0x0, 559484976) start.
17-03-17 21:37:21.148 -07 000000476 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:37:21.148 -07 000000458 INF: FPGA: Recv CAMSNAP
17-03-17 21:37:21.148 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 21:37:21.238 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2147487792, 0x0, 559484976) end. Duration was 125 ms.
17-03-17 21:37:21.238 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:21.238 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:37:21.238 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 21:37:21.348 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:21.348 -07 000000480 INF: Image SNR check: start
17-03-17 21:37:21.348 -07 000000475 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:21.358 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:21.358 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:37:21.368 -07 000000480 INF: Image SNR check: pass  [peak (Max-Min)=61.33]
17-03-17 21:37:21.368 -07 000000480 INF: Autofocus start
17-03-17 21:37:21.368 -07 000000480 INF: MeasureProfile start
17-03-17 21:37:21.378 -07 000000480 INF: MeasureProfile done
17-03-17 21:37:21.378 -07 000000480 INF: X=-16  Z correction [um]=-0.1496812
17-03-17 21:37:21.378 -07 000000480 INF: Autofocus finished
17-03-17 21:37:21.558 -07 000000476 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:37:21.558 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-17 21:37:21.558 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.179605981655305. ----------
17-03-17 21:37:21.568 -07 000000610 INF: Cycle	53	Tile	1	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:21.568 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37714, sync = True, waitForSettling = True)
17-03-17 21:37:21.568 -07 000000610 INF: Z Motor: Moving to -0.172644 mm, started at -0.179606 mm, distance = 6.96 um
17-03-17 21:37:21.568 -07 000000610 INF: FPGA: Xmit ZDACW 37714\n [Z Motor]
17-03-17 21:37:21.568 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:37:21.578 -07 000000610 INF: FPGA: 'ZDACW 37714' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:37:21.578 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:21.578 -07 000000569 INF: FPGA: Recv ZDACR 37714
17-03-17 21:37:21.588 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.588 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:21.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.738 -07 000000438 INF: FPGA: Recv ZSGSRD 36172
17-03-17 21:37:21.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.748 -07 000000382 INF: FPGA: Recv ZSGSRD 36160
17-03-17 21:37:21.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.758 -07 000000627 INF: FPGA: Recv ZSGSRD 36158
17-03-17 21:37:21.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.768 -07 000000480 INF: FPGA: Recv ZSGSRD 36167
17-03-17 21:37:21.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.778 -07 000000424 INF: FPGA: Recv ZSGSRD 36166
17-03-17 21:37:21.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.788 -07 000000476 INF: FPGA: Recv ZSGSRD 36169
17-03-17 21:37:21.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.798 -07 000000429 INF: FPGA: Recv ZSGSRD 36165
17-03-17 21:37:21.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.808 -07 000000512 INF: FPGA: Recv ZSGSRD 36162
17-03-17 21:37:21.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.818 -07 000000458 INF: FPGA: Recv ZSGSRD 36171
17-03-17 21:37:21.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:21.828 -07 000000501 INF: FPGA: Recv ZSGSRD 36160
17-03-17 21:37:21.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.838 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:21.838 -07 000000512 INF: FPGA: Recv ZPIEZORD 32295
17-03-17 21:37:21.848 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:21.848 -07 000000610 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.755 V. Piezo Error = -8.6 V.
17-03-17 21:37:21.848 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.6 um, Read 10 ADC samples: Avg = 36165 (-171.8 uncal um), Error = 0.9 uncal um, Median = 36166 (-171.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36158 (-171.7 uncal um), Max = 36172 (-171.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:37:21.848 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36165, posNoise = 7, negNoise = 7
17-03-17 21:37:21.848 -07 000000610 INF: Z Motor: After move to -0.172644, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:21.848 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:21.848 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:21.848 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:21.848 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:21.848 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:21.848 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:21.848 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:21.848 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:21.848 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:21.848 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:37:21.848 -07 000000501 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 21:37:21.848 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:37:21.848 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:21.858 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:37:21.858 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:21.868 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 21:37:21.868 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:37:21.868 -07 000000501 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-17 21:37:21.868 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:21.878 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:37:21.878 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:21.888 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:37:21.888 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 40 ms.
17-03-17 21:37:21.888 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37890 150\n [Camera]
17-03-17 21:37:21.898 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:21.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:22.088 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:22.528 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:22.528 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:22.528 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:22.528 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:22.528 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:22.528 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:22.658 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:22.658 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2166569176, 0x0, 391868352) start.
17-03-17 21:37:22.658 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:22.658 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:37:22.718 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37890 820
17-03-17 21:37:22.868 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:23.028 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:37:23.028 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:37:23.028 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:23.038 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:23.038 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2166569176, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:37:23.038 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:37:23.038 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:23.038 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 513 ms.
17-03-17 21:37:23.048 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:23.048 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-17 21:37:23.078 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:23.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:23.078 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:23.078 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:23.078 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:37:23.078 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:23.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:23.078 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:23.078 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:23.078 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2201991440, 0x0, 418435064) start.
17-03-17 21:37:23.268 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:37:23.268 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:23.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37890 150' command took 2 ms to send, 1375 ms to get response, and 1379 ms overall
17-03-17 21:37:23.268 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172886
17-03-17 21:37:23.268 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17289 mm
17-03-17 21:37:23.268 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:23.278 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 21:37:23.278 -07 000000438 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-17 21:37:23.278 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:23.278 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 37767, sync = True, waitForSettling = False)
17-03-17 21:37:23.278 -07 000000627 INF: Z Motor: Moving to -0.172886 mm, started at -0.172655 mm, distance = -0.23 um
17-03-17 21:37:23.278 -07 000000458 INF: FPGA: Recv YRDPOS 122697
17-03-17 21:37:23.288 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:37:23.288 -07 000000627 INF: FPGA: Xmit ZDACW 37767\n [Z Motor]
17-03-17 21:37:23.288 -07 000000438 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:23.288 -07 000000438 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:23.288 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:37:23.288 -07 000000438 INF: Y Motor: Moving 1331 steps2
17-03-17 21:37:23.298 -07 000000627 INF: FPGA: 'ZDACW 37767' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 21:37:23.298 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:23.298 -07 000000501 INF: FPGA: Recv ZDACR 37767
17-03-17 21:37:23.308 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:23.308 -07 000000627 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-17 21:37:23.308 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:23.478 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 403 ms.
17-03-17 21:37:23.478 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 21:37:23.478 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:23.478 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2201991440, 0x0, 418435064) end. Duration was 401 ms.
17-03-17 21:37:23.478 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:37:23.478 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:23.488 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 21:37:23.488 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 413 ms.
17-03-17 21:37:23.488 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 9 ms.
17-03-17 21:37:23.498 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 417 ms.
17-03-17 21:37:23.678 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:37:23.678 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 21:37:23.708 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:23.718 -07 000000501 INF: FPGA: Recv YRDPOS 124381
17-03-17 21:37:23.718 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:37:23.718 -07 000000438 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:23.718 -07 000000438 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 21:37:23.718 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.832 mm, average velocity = 2.106 mm/sec
17-03-17 21:37:24.178 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.993549,
17-03-17 21:37:24.668 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:24.668 -07 000000576 INF: FPGA: Recv YRDPOS 124382
17-03-17 21:37:24.678 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:24.678 -07 000000438 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:24.698 -07 000000438 INF: Y Motor: After move to 60.742607, error = -0.009209, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:24.698 -07 000000438 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:37:24.698 -07 000000438 INF: Y Motor: Moved to 60.7334 after 1422 ms (table move)
17-03-17 21:37:24.698 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172886 mm (DAC = 37767)
17-03-17 21:37:24.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.708 -07 000000512 INF: FPGA: Recv ZSGSRD 36201
17-03-17 21:37:24.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:37:24.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.708 -07 000000458 INF: FPGA: Recv ZSGSRD 36198
17-03-17 21:37:24.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.718 -07 000000429 INF: FPGA: Recv ZSGSRD 36199
17-03-17 21:37:24.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.728 -07 000000569 INF: FPGA: Recv ZSGSRD 36206
17-03-17 21:37:24.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.738 -07 000000476 INF: FPGA: Recv ZSGSRD 36208
17-03-17 21:37:24.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.748 -07 000000415 INF: FPGA: Recv ZSGSRD 36202
17-03-17 21:37:24.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.758 -07 000000382 INF: FPGA: Recv ZSGSRD 36203
17-03-17 21:37:24.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.768 -07 000000626 INF: FPGA: Recv ZSGSRD 36204
17-03-17 21:37:24.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.778 -07 000000431 INF: FPGA: Recv ZSGSRD 36193
17-03-17 21:37:24.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:24.788 -07 000000476 INF: FPGA: Recv ZSGSRD 36197
17-03-17 21:37:24.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.798 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:24.798 -07 000000012 INF: FPGA: Recv ZPIEZORD 32355
17-03-17 21:37:24.808 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:24.808 -07 000000610 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.763 V. Piezo Error = -8.5 V.
17-03-17 21:37:24.808 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.9 um, Read 10 ADC samples: Avg = 36201 (-172.0 uncal um), Error = 0.9 uncal um, Median = 36202 (-172.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36193 (-172.0 uncal um), Max = 36208 (-172.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:37:24.808 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36201, posNoise = 7, negNoise = 8
17-03-17 21:37:24.808 -07 000000610 INF: Z Motor: After move to -0.172886, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:24.808 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 104 ms (allowed 150 ms), total time = 1528 ms
17-03-17 21:37:24.808 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:24.858 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms
17-03-17 21:37:24.858 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:24.858 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.7333984375, Z-position -0.172886255755023. ----------
17-03-17 21:37:24.858 -07 000000610 INF: Cycle	53	Tile	2	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:24.858 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37590, sync = True, waitForSettling = True)
17-03-17 21:37:24.858 -07 000000610 INF: Z Motor: Moving to -0.172076 mm, started at -0.172886 mm, distance = 0.81 um
17-03-17 21:37:24.858 -07 000000610 INF: FPGA: Xmit ZDACW 37590\n [Z Motor]
17-03-17 21:37:24.858 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:37:24.868 -07 000000610 INF: FPGA: 'ZDACW 37590' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:24.868 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:24.868 -07 000000547 INF: FPGA: Recv ZDACR 37590
17-03-17 21:37:24.878 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:24.878 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:25.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.028 -07 000000429 INF: FPGA: Recv ZSGSRD 36076
17-03-17 21:37:25.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.038 -07 000000458 INF: FPGA: Recv ZSGSRD 36076
17-03-17 21:37:25.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.048 -07 000000438 INF: FPGA: Recv ZSGSRD 36079
17-03-17 21:37:25.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.058 -07 000000415 INF: FPGA: Recv ZSGSRD 36077
17-03-17 21:37:25.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.068 -07 000000475 INF: FPGA: Recv ZSGSRD 36081
17-03-17 21:37:25.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.078 -07 000000512 INF: FPGA: Recv ZSGSRD 36076
17-03-17 21:37:25.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.088 -07 000000382 INF: FPGA: Recv ZSGSRD 36077
17-03-17 21:37:25.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.098 -07 000000626 INF: FPGA: Recv ZSGSRD 36078
17-03-17 21:37:25.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.108 -07 000000424 INF: FPGA: Recv ZSGSRD 36072
17-03-17 21:37:25.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:25.118 -07 000000608 INF: FPGA: Recv ZSGSRD 36072
17-03-17 21:37:25.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.128 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:25.128 -07 000000429 INF: FPGA: Recv ZPIEZORD 32202
17-03-17 21:37:25.138 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:25.138 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.736 V. Piezo Error = -8.6 V.
17-03-17 21:37:25.138 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36076 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36076 (-171.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36072 (-171.2 uncal um), Max = 36081 (-171.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:37:25.138 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36076, posNoise = 5, negNoise = 4
17-03-17 21:37:25.138 -07 000000610 INF: Z Motor: After move to -0.172076, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:25.138 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:25.138 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:25.138 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:25.138 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:25.138 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:25.138 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:25.138 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:25.138 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:25.138 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:25.138 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:25.138 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:25.138 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:25.138 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:25.148 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:25.148 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:25.148 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:25.148 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:25.158 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:37:25.158 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:37:25.158 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:37:25.158 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:37:25.168 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37767 150\n [Camera]
17-03-17 21:37:25.358 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:25.798 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:25.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:25.798 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:25.798 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:25.798 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:37:25.798 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:25.798 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:25.798 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:25.798 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:25.798 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:37:25.988 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37767 820
17-03-17 21:37:26.138 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:26.188 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:37:26.188 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:37:26.188 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:26.188 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 391 ms.
17-03-17 21:37:26.188 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:37:26.188 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:26.188 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:26.198 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:26.198 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:37:26.198 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:37:26.348 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:37:26.348 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:37:26.358 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:26.358 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:26.358 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:37:26.358 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:37:26.358 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:37:26.358 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:26.478 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:26.478 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:37:26.538 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:37:26.538 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:26.538 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37767 150' command took 2 ms to send, 1368 ms to get response, and 1379 ms overall
17-03-17 21:37:26.548 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.172334
17-03-17 21:37:26.548 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17233 mm
17-03-17 21:37:26.548 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:26.548 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 21:37:26.548 -07 000000429 INF: Y Motor: Moving to 61.5726 mm, started at 60.7334 mm, delta = 0.8392 mm
17-03-17 21:37:26.548 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:26.548 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 37646, sync = True, waitForSettling = False)
17-03-17 21:37:26.548 -07 000000576 INF: Z Motor: Moving to -0.172332 mm, started at -0.172083 mm, distance = -0.25 um
17-03-17 21:37:26.548 -07 000000458 INF: FPGA: Recv YRDPOS 124382
17-03-17 21:37:26.558 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:37:26.558 -07 000000429 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:26.558 -07 000000429 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:26.558 -07 000000429 INF: Y Motor: Moving 1343 steps-20
17-03-17 21:37:26.558 -07 000000576 INF: FPGA: Xmit ZDACW 37646\n [Z Motor]
17-03-17 21:37:26.558 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 21:37:26.568 -07 000000576 INF: FPGA: 'ZDACW 37646' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:37:26.568 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:26.568 -07 000000475 INF: FPGA: Recv ZDACR 37646
17-03-17 21:37:26.578 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:26.578 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:26.578 -07 000000576 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:37:26.758 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 402 ms.
17-03-17 21:37:26.758 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 21:37:26.758 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:26.758 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:26.758 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 21:37:26.878 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 21:37:26.878 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:37:26.878 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:26.888 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:37:26.888 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 530 ms.
17-03-17 21:37:26.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:26.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:26.948 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:37:26.948 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:37:26.988 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:26.988 -07 000000012 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:37:26.998 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:37:26.998 -07 000000429 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:26.998 -07 000000429 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 21:37:26.998 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.109 mm/sec
17-03-17 21:37:27.948 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:27.948 -07 000000627 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:37:27.958 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:27.958 -07 000000429 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:27.978 -07 000000429 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:27.978 -07 000000429 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:27.978 -07 000000429 INF: Y Motor: Moved to 61.5640 after 1428 ms (table move)
17-03-17 21:37:27.978 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172332 mm (DAC = 37646)
17-03-17 21:37:27.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:27.978 -07 000000627 INF: FPGA: Recv ZSGSRD 36114
17-03-17 21:37:27.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:27.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:27.988 -07 000000012 INF: FPGA: Recv ZSGSRD 36105
17-03-17 21:37:27.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:27.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:27.998 -07 000000501 INF: FPGA: Recv ZSGSRD 36114
17-03-17 21:37:28.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.008 -07 000000431 INF: FPGA: Recv ZSGSRD 36120
17-03-17 21:37:28.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.018 -07 000000424 INF: FPGA: Recv ZSGSRD 36123
17-03-17 21:37:28.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.028 -07 000000569 INF: FPGA: Recv ZSGSRD 36117
17-03-17 21:37:28.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.038 -07 000000512 INF: FPGA: Recv ZSGSRD 36116
17-03-17 21:37:28.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.048 -07 000000547 INF: FPGA: Recv ZSGSRD 36118
17-03-17 21:37:28.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.058 -07 000000459 INF: FPGA: Recv ZSGSRD 36117
17-03-17 21:37:28.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.068 -07 000000608 INF: FPGA: Recv ZSGSRD 36110
17-03-17 21:37:28.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.078 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:28.078 -07 000000458 INF: FPGA: Recv ZPIEZORD 32281
17-03-17 21:37:28.088 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.088 -07 000000610 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.744 V. Piezo Error = -8.5 V.
17-03-17 21:37:28.088 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.3 um, Read 10 ADC samples: Avg = 36115 (-171.5 uncal um), Error = 0.9 uncal um, Median = 36116 (-171.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 36105 (-171.4 uncal um), Max = 36123 (-171.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:37:28.088 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36115, posNoise = 8, negNoise = 10
17-03-17 21:37:28.088 -07 000000610 INF: Z Motor: After move to -0.172332, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:28.088 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 106 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:37:28.088 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:28.138 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-17 21:37:28.138 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:28.138 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.172333773510832. ----------
17-03-17 21:37:28.138 -07 000000610 INF: Cycle	53	Tile	3	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:28.138 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37470, sync = True, waitForSettling = True)
17-03-17 21:37:28.138 -07 000000610 INF: Z Motor: Moving to -0.171527 mm, started at -0.172334 mm, distance = 0.81 um
17-03-17 21:37:28.138 -07 000000610 INF: FPGA: Xmit ZDACW 37470\n [Z Motor]
17-03-17 21:37:28.138 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:37:28.148 -07 000000610 INF: FPGA: 'ZDACW 37470' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:28.148 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:28.148 -07 000000569 INF: FPGA: Recv ZDACR 37470
17-03-17 21:37:28.158 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.158 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:28.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.308 -07 000000512 INF: FPGA: Recv ZSGSRD 35983
17-03-17 21:37:28.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:28.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.318 -07 000000547 INF: FPGA: Recv ZSGSRD 35988
17-03-17 21:37:28.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.328 -07 000000626 INF: FPGA: Recv ZSGSRD 35992
17-03-17 21:37:28.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.338 -07 000000608 INF: FPGA: Recv ZSGSRD 35997
17-03-17 21:37:28.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.348 -07 000000475 INF: FPGA: Recv ZSGSRD 35999
17-03-17 21:37:28.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.358 -07 000000458 INF: FPGA: Recv ZSGSRD 35986
17-03-17 21:37:28.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.368 -07 000000382 INF: FPGA: Recv ZSGSRD 35991
17-03-17 21:37:28.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.378 -07 000000431 INF: FPGA: Recv ZSGSRD 35987
17-03-17 21:37:28.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.388 -07 000000459 INF: FPGA: Recv ZSGSRD 35986
17-03-17 21:37:28.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:28.398 -07 000000576 INF: FPGA: Recv ZSGSRD 35990
17-03-17 21:37:28.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.408 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:28.408 -07 000000626 INF: FPGA: Recv ZPIEZORD 32083
17-03-17 21:37:28.418 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:28.418 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.718 V. Piezo Error = -8.6 V.
17-03-17 21:37:28.418 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.5 um, Read 10 ADC samples: Avg = 35990 (-170.7 uncal um), Error = 0.9 uncal um, Median = 35989 (-170.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35983 (-170.6 uncal um), Max = 35999 (-170.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:37:28.418 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35990, posNoise = 9, negNoise = 7
17-03-17 21:37:28.418 -07 000000610 INF: Z Motor: After move to -0.171527, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:28.418 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:28.418 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:28.418 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:28.418 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:28.418 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:28.418 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:28.418 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:28.418 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:28.418 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:28.418 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:28.418 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:28.418 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:28.418 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:28.428 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:28.428 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:28.428 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:28.428 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:28.438 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:37:28.438 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:37:28.438 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:37:28.438 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:37:28.448 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37646 150\n [Camera]
17-03-17 21:37:28.648 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:29.078 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:29.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:29.078 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:29.088 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:29.088 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:29.088 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:29.088 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:29.088 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:37:29.088 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:29.088 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:37:29.278 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37646 820
17-03-17 21:37:29.418 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:29.458 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:37:29.458 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:37:29.458 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:29.468 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:37:29.468 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:37:29.468 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:29.468 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:29.468 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:29.468 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:37:29.478 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:37:29.548 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.958108,
17-03-17 21:37:29.628 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:29.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:29.638 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:29.638 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:29.638 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:37:29.638 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:29.638 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:29.638 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:29.638 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:29.638 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:37:29.828 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:37:29.828 -07 000000627 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:29.828 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37646 150' command took 2 ms to send, 1371 ms to get response, and 1381 ms overall
17-03-17 21:37:29.828 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:37:29.828 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.171530746993112. ------
17-03-17 21:37:29.828 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:29.828 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17792 mm
17-03-17 21:37:29.828 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:29.838 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:29.838 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:29.838 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:37:29.838 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 38867, sync = True, waitForSettling = False)
17-03-17 21:37:29.838 -07 000000012 INF: Z Motor: Moving to -0.177922 mm, started at -0.171531 mm, distance = -6.39 um
17-03-17 21:37:29.838 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 21:37:29.838 -07 000000475 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-17 21:37:29.848 -07 000000012 INF: FPGA: Xmit ZDACW 38867\n [Z Motor]
17-03-17 21:37:29.848 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 21:37:29.858 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:29.858 -07 000000012 INF: FPGA: 'ZDACW 38867' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:37:29.858 -07 000000569 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:37:29.868 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 21:37:29.868 -07 000000475 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:29.868 -07 000000475 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:29.868 -07 000000475 INF: Y Motor: Moving 1342 steps-18
17-03-17 21:37:29.868 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:29.868 -07 000000547 INF: FPGA: Recv ZDACR 38867
17-03-17 21:37:29.878 -07 000000012 INF: FPGA: 'ZDACR' command took 3 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:29.878 -07 000000012 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-17 21:37:29.888 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:30.018 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:37:30.018 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:37:30.018 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:30.018 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:30.018 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:37:30.018 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:37:30.018 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:37:30.018 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:30.018 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:30.028 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:37:30.038 -07 000000415 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:37:30.038 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:37:30.258 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:37:30.258 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 21:37:30.298 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:30.308 -07 000000501 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:37:30.308 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:30.308 -07 000000475 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:30.308 -07 000000475 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:37:30.308 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.839 mm, average velocity = 2.123 mm/sec
17-03-17 21:37:31.258 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:31.258 -07 000000576 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:37:31.268 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:31.268 -07 000000475 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:31.288 -07 000000475 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:31.288 -07 000000475 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:31.288 -07 000000475 INF: Y Motor: Moved to 62.3955 after 1453 ms (table move)
17-03-17 21:37:31.288 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177922 mm (DAC = 38867)
17-03-17 21:37:31.288 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.298 -07 000000627 INF: FPGA: Recv ZSGSRD 36991
17-03-17 21:37:31.298 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:37:31.298 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.298 -07 000000576 INF: FPGA: Recv ZSGSRD 36984
17-03-17 21:37:31.308 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:37:31.308 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.308 -07 000000476 INF: FPGA: Recv ZSGSRD 36991
17-03-17 21:37:31.318 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.318 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.318 -07 000000501 INF: FPGA: Recv ZSGSRD 36992
17-03-17 21:37:31.328 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.328 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.328 -07 000000475 INF: FPGA: Recv ZSGSRD 36994
17-03-17 21:37:31.338 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.338 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.338 -07 000000627 INF: FPGA: Recv ZSGSRD 36978
17-03-17 21:37:31.348 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.348 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.348 -07 000000458 INF: FPGA: Recv ZSGSRD 36982
17-03-17 21:37:31.358 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.358 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.358 -07 000000476 INF: FPGA: Recv ZSGSRD 36994
17-03-17 21:37:31.368 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.368 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.368 -07 000000424 INF: FPGA: Recv ZSGSRD 36984
17-03-17 21:37:31.378 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.378 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:31.378 -07 000000475 INF: FPGA: Recv ZSGSRD 36984
17-03-17 21:37:31.388 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.388 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:31.388 -07 000000569 INF: FPGA: Recv ZPIEZORD 33440
17-03-17 21:37:31.398 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:31.398 -07 000000626 INF: Z Motor: Piezo is near 51.4 V (nominally 0 to 100 V), expect near 59.3 V, since DAC is at 5.931 V. Piezo Error = -7.9 V.
17-03-17 21:37:31.398 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.9 um, Read 10 ADC samples: Avg = 36987 (-177.0 uncal um), Error = 0.9 uncal um, Median = 36988 (-177.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36978 (-177.0 uncal um), Max = 36994 (-177.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:37:31.398 -07 000000626 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36987, posNoise = 7, negNoise = 9
17-03-17 21:37:31.398 -07 000000626 INF: Z Motor: After move to -0.177922, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:31.398 -07 000000626 INF: Z Motor: Settle wait time = 1457 ms, measure time = 102 ms (allowed 150 ms), total time = 1559 ms
17-03-17 21:37:31.398 -07 000000626 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:31.448 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-17 21:37:31.448 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:31.448 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:31.448 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:31.448 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:31.448 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:37:31.448 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:31.448 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:31.448 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:31.448 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:37:31.458 -07 000000431 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:37:31.458 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:37:31.458 -07 000000431 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 21:37:31.458 -07 000000431 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 21:37:31.468 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:37:31.508 -07 000000424 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:37:31.708 -07 000000608 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:37:31.708 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:37:31.708 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:37:31.708 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) start.
17-03-17 21:37:31.748 -07 000000627 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:37:31.748 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-17 21:37:31.748 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 2 ms to send, 275 ms to get response, and 284 ms overall
17-03-17 21:37:31.828 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 21:37:31.828 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:31.828 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:37:31.828 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 21:37:31.848 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:31.848 -07 000000475 INF: Autofocus start
17-03-17 21:37:31.848 -07 000000475 INF: MeasureProfile start
17-03-17 21:37:31.858 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:31.858 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:31.858 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:37:31.858 -07 000000475 INF: MeasureProfile done
17-03-17 21:37:31.858 -07 000000475 INF: X=0  Z correction [um]=-0.0713522
17-03-17 21:37:31.858 -07 000000475 INF: Autofocus finished
17-03-17 21:37:31.898 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:32.058 -07 000000415 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:37:32.058 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall
17-03-17 21:37:32.058 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.177935686498447. ----------
17-03-17 21:37:32.068 -07 000000610 INF: Cycle	53	Tile	4	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:32.068 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37364, sync = True, waitForSettling = True)
17-03-17 21:37:32.068 -07 000000610 INF: Z Motor: Moving to -0.171041 mm, started at -0.177936 mm, distance = 6.89 um
17-03-17 21:37:32.068 -07 000000610 INF: FPGA: Xmit ZDACW 37364\n [Z Motor]
17-03-17 21:37:32.068 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:37:32.078 -07 000000610 INF: FPGA: 'ZDACW 37364' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:32.078 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:32.078 -07 000000458 INF: FPGA: Recv ZDACR 37364
17-03-17 21:37:32.088 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.088 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:32.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.238 -07 000000012 INF: FPGA: Recv ZSGSRD 35918
17-03-17 21:37:32.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.248 -07 000000547 INF: FPGA: Recv ZSGSRD 35921
17-03-17 21:37:32.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.258 -07 000000626 INF: FPGA: Recv ZSGSRD 35911
17-03-17 21:37:32.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.268 -07 000000382 INF: FPGA: Recv ZSGSRD 35914
17-03-17 21:37:32.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.278 -07 000000627 INF: FPGA: Recv ZSGSRD 35918
17-03-17 21:37:32.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.288 -07 000000431 INF: FPGA: Recv ZSGSRD 35923
17-03-17 21:37:32.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:37:32.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.298 -07 000000476 INF: FPGA: Recv ZSGSRD 35911
17-03-17 21:37:32.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.308 -07 000000424 INF: FPGA: Recv ZSGSRD 35911
17-03-17 21:37:32.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.318 -07 000000012 INF: FPGA: Recv ZSGSRD 35916
17-03-17 21:37:32.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:32.328 -07 000000512 INF: FPGA: Recv ZSGSRD 35916
17-03-17 21:37:32.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.338 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:32.338 -07 000000415 INF: FPGA: Recv ZPIEZORD 31987
17-03-17 21:37:32.348 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:32.348 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.701 V. Piezo Error = -8.7 V.
17-03-17 21:37:32.348 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35916 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35916 (-170.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35911 (-170.1 uncal um), Max = 35923 (-170.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:37:32.348 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35916, posNoise = 7, negNoise = 5
17-03-17 21:37:32.348 -07 000000610 INF: Z Motor: After move to -0.171041, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:32.348 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 21:37:32.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:32.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:32.348 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:32.348 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:32.348 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:32.348 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:32.348 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:32.348 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:32.348 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:37:32.348 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:32.348 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:32.348 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:32.358 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:32.358 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:32.358 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:32.358 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:32.368 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:37:32.368 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:37:32.368 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:37:32.368 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:37:32.368 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37540 150\n [Camera]
17-03-17 21:37:32.568 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:32.998 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:33.008 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:33.008 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:33.008 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:33.008 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:37:33.008 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:33.008 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:33.008 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:33.128 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:33.128 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:37:33.198 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37540 820
17-03-17 21:37:33.348 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:33.398 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 391 ms.
17-03-17 21:37:33.398 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:37:33.398 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:33.398 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:33.398 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:37:33.518 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:37:33.518 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:37:33.518 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:33.518 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:33.528 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 517 ms.
17-03-17 21:37:33.558 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1180
17-03-17 21:37:33.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1180
17-03-17 21:37:33.558 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:33.558 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:33.558 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:37:33.558 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1180
17-03-17 21:37:33.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1180
17-03-17 21:37:33.558 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:33.558 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:33.558 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 21:37:33.748 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:37:33.748 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:33.748 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37540 150' command took 2 ms to send, 1373 ms to get response, and 1379 ms overall
17-03-17 21:37:33.748 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171614
17-03-17 21:37:33.748 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17161 mm
17-03-17 21:37:33.748 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:33.748 -07 000000459 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 21:37:33.748 -07 000000459 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-17 21:37:33.748 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:33.748 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 37489, sync = True, waitForSettling = False)
17-03-17 21:37:33.748 -07 000000438 INF: Z Motor: Moving to -0.171614 mm, started at -0.171055 mm, distance = -0.56 um
17-03-17 21:37:33.758 -07 000000438 INF: FPGA: Xmit ZDACW 37489\n [Z Motor]
17-03-17 21:37:33.758 -07 000000627 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:37:33.758 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:37:33.758 -07 000000459 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:33.758 -07 000000459 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:33.758 -07 000000459 INF: Y Motor: Moving 1339 steps-15
17-03-17 21:37:33.758 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:37:33.768 -07 000000438 INF: FPGA: 'ZDACW 37489' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:33.768 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:33.768 -07 000000415 INF: FPGA: Recv ZDACR 37489
17-03-17 21:37:33.778 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:33.778 -07 000000438 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 21:37:33.778 -07 000000459 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:33.938 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:37:33.938 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:37:33.938 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:33.938 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:37:33.938 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:37:33.938 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:33.948 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:33.948 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 21:37:33.948 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:37:33.948 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:37:34.158 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:37:34.158 -07 000000459 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 396 ms overall
17-03-17 21:37:34.188 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:34.198 -07 000000547 INF: FPGA: Recv YRDPOS 129483
17-03-17 21:37:34.198 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:37:34.198 -07 000000459 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:34.198 -07 000000459 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:37:34.198 -07 000000459 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.837 mm, average velocity = 2.114 mm/sec
17-03-17 21:37:34.918 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.99219,
17-03-17 21:37:35.148 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:35.148 -07 000000415 INF: FPGA: Recv YRDPOS 129483
17-03-17 21:37:35.158 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:35.158 -07 000000459 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:35.178 -07 000000459 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:35.178 -07 000000459 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:35.178 -07 000000459 INF: Y Motor: Moved to 63.2241 after 1426 ms (table move)
17-03-17 21:37:35.178 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171614 mm (DAC = 37489)
17-03-17 21:37:35.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.178 -07 000000576 INF: FPGA: Recv ZSGSRD 36002
17-03-17 21:37:35.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:37:35.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.188 -07 000000458 INF: FPGA: Recv ZSGSRD 35996
17-03-17 21:37:35.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.198 -07 000000480 INF: FPGA: Recv ZSGSRD 36003
17-03-17 21:37:35.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.208 -07 000000627 INF: FPGA: Recv ZSGSRD 36005
17-03-17 21:37:35.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.218 -07 000000501 INF: FPGA: Recv ZSGSRD 36011
17-03-17 21:37:35.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.228 -07 000000382 INF: FPGA: Recv ZSGSRD 36010
17-03-17 21:37:35.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.238 -07 000000431 INF: FPGA: Recv ZSGSRD 36017
17-03-17 21:37:35.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.258 -07 000000382 INF: FPGA: Recv ZSGSRD 35998
17-03-17 21:37:35.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:35.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.278 -07 000000501 INF: FPGA: Recv ZSGSRD 36005
17-03-17 21:37:35.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:35.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.288 -07 000000480 INF: FPGA: Recv ZSGSRD 36004
17-03-17 21:37:35.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.318 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:35.318 -07 000000012 INF: FPGA: Recv ZPIEZORD 32148
17-03-17 21:37:35.328 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:37:35.328 -07 000000610 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.720 V. Piezo Error = -8.5 V.
17-03-17 21:37:35.328 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36005 (-170.7 uncal um), Error = 0.9 uncal um, Median = 36004 (-170.7 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 35996 (-170.7 uncal um), Max = 36017 (-170.8 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:37:35.328 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36005, posNoise = 12, negNoise = 9
17-03-17 21:37:35.328 -07 000000610 INF: Z Motor: After move to -0.171614, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:35.328 -07 000000610 INF: Z Motor: Settle wait time = 1427 ms, measure time = 144 ms (allowed 150 ms), total time = 1571 ms
17-03-17 21:37:35.328 -07 000000610 INF: Z Motor: Waiting extra 6 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:35.338 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1584 ms
17-03-17 21:37:35.338 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:35.338 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.171627110175238. ----------
17-03-17 21:37:35.338 -07 000000610 INF: Cycle	53	Tile	5	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:35.338 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37312, sync = True, waitForSettling = True)
17-03-17 21:37:35.338 -07 000000610 INF: Z Motor: Moving to -0.170803 mm, started at -0.171627 mm, distance = 0.82 um
17-03-17 21:37:35.338 -07 000000610 INF: FPGA: Xmit ZDACW 37312\n [Z Motor]
17-03-17 21:37:35.338 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:37:35.348 -07 000000610 INF: FPGA: 'ZDACW 37312' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:35.348 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:35.348 -07 000000431 INF: FPGA: Recv ZDACR 37312
17-03-17 21:37:35.358 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.358 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:35.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.508 -07 000000382 INF: FPGA: Recv ZSGSRD 35877
17-03-17 21:37:35.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.518 -07 000000627 INF: FPGA: Recv ZSGSRD 35882
17-03-17 21:37:35.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.528 -07 000000458 INF: FPGA: Recv ZSGSRD 35876
17-03-17 21:37:35.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.538 -07 000000569 INF: FPGA: Recv ZSGSRD 35885
17-03-17 21:37:35.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.548 -07 000000424 INF: FPGA: Recv ZSGSRD 35877
17-03-17 21:37:35.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.558 -07 000000415 INF: FPGA: Recv ZSGSRD 35878
17-03-17 21:37:35.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.568 -07 000000459 INF: FPGA: Recv ZSGSRD 35878
17-03-17 21:37:35.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.578 -07 000000480 INF: FPGA: Recv ZSGSRD 35877
17-03-17 21:37:35.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.588 -07 000000476 INF: FPGA: Recv ZSGSRD 35873
17-03-17 21:37:35.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:35.598 -07 000000431 INF: FPGA: Recv ZSGSRD 35879
17-03-17 21:37:35.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.608 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:35.608 -07 000000626 INF: FPGA: Recv ZPIEZORD 31944
17-03-17 21:37:35.618 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:35.618 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.693 V. Piezo Error = -8.7 V.
17-03-17 21:37:35.618 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35878 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35878 (-169.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35873 (-169.9 uncal um), Max = 35885 (-170.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:37:35.618 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35878, posNoise = 7, negNoise = 5
17-03-17 21:37:35.618 -07 000000610 INF: Z Motor: After move to -0.170803, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:35.618 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:37:35.618 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:35.618 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:35.618 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:35.618 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:35.618 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:35.618 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:35.618 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:35.618 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:35.618 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:37:35.618 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:35.618 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:35.618 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:35.628 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:35.628 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:35.628 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:35.628 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:35.638 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:37:35.638 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:37:35.638 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:37:35.638 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:37:35.638 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37489 150\n [Camera]
17-03-17 21:37:35.838 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:36.268 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:36.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:36.268 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:36.268 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:36.268 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:37:36.278 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:36.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:36.278 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:36.278 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:36.398 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:37:36.468 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37489 820
17-03-17 21:37:36.618 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:36.648 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:37:36.648 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:37:36.648 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:36.648 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:36.648 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:37:36.768 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:37:36.768 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 493 ms.
17-03-17 21:37:36.768 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:36.768 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:36.778 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-17 21:37:36.818 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:36.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:36.828 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:36.828 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:36.828 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:36.828 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:36.828 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:36.828 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:37:36.828 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:36.828 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:37:36.898 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:37.018 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:37:37.018 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:37.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37489 150' command took 2 ms to send, 1371 ms to get response, and 1378 ms overall
17-03-17 21:37:37.018 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.171169
17-03-17 21:37:37.018 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17117 mm
17-03-17 21:37:37.018 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:37.018 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 21:37:37.018 -07 000000012 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-17 21:37:37.018 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:37.018 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 37392, sync = True, waitForSettling = False)
17-03-17 21:37:37.018 -07 000000382 INF: Z Motor: Moving to -0.171170 mm, started at -0.170811 mm, distance = -0.36 um
17-03-17 21:37:37.018 -07 000000627 INF: FPGA: Recv YRDPOS 129484
17-03-17 21:37:37.028 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:37.028 -07 000000382 INF: FPGA: Xmit ZDACW 37392\n [Z Motor]
17-03-17 21:37:37.028 -07 000000012 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:37.028 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:37:37.028 -07 000000012 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:37.028 -07 000000012 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:37:37.038 -07 000000382 INF: FPGA: 'ZDACW 37392' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:37:37.038 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:37.048 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:37.048 -07 000000512 INF: FPGA: Recv ZDACR 37392
17-03-17 21:37:37.058 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:37.058 -07 000000382 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-17 21:37:37.218 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 385 ms.
17-03-17 21:37:37.218 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:37:37.218 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:37.218 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:37:37.218 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:37:37.218 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:37.218 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:37.228 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:37.228 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 21:37:37.228 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 21:37:37.408 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:37:37.408 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-17 21:37:37.448 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:37.458 -07 000000547 INF: FPGA: Recv YRDPOS 131189
17-03-17 21:37:37.458 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 4 ms overall
17-03-17 21:37:37.458 -07 000000012 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:37.458 -07 000000012 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-17 21:37:37.458 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.838 mm, average velocity = 2.195 mm/sec
17-03-17 21:37:38.408 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:38.408 -07 000000458 INF: FPGA: Recv YRDPOS 131189
17-03-17 21:37:38.418 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:38.418 -07 000000012 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:38.438 -07 000000012 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:38.438 -07 000000012 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:38.438 -07 000000012 INF: Y Motor: Moved to 64.0571 after 1413 ms (table move)
17-03-17 21:37:38.438 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171170 mm (DAC = 37392)
17-03-17 21:37:38.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.438 -07 000000627 INF: FPGA: Recv ZSGSRD 35936
17-03-17 21:37:38.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:38.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.448 -07 000000458 INF: FPGA: Recv ZSGSRD 35931
17-03-17 21:37:38.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.458 -07 000000476 INF: FPGA: Recv ZSGSRD 35938
17-03-17 21:37:38.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.468 -07 000000501 INF: FPGA: Recv ZSGSRD 35939
17-03-17 21:37:38.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.478 -07 000000459 INF: FPGA: Recv ZSGSRD 35936
17-03-17 21:37:38.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.488 -07 000000576 INF: FPGA: Recv ZSGSRD 35935
17-03-17 21:37:38.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.498 -07 000000438 INF: FPGA: Recv ZSGSRD 35933
17-03-17 21:37:38.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.508 -07 000000480 INF: FPGA: Recv ZSGSRD 35933
17-03-17 21:37:38.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.518 -07 000000475 INF: FPGA: Recv ZSGSRD 35930
17-03-17 21:37:38.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.528 -07 000000459 INF: FPGA: Recv ZSGSRD 35930
17-03-17 21:37:38.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.538 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:38.538 -07 000000576 INF: FPGA: Recv ZPIEZORD 32031
17-03-17 21:37:38.548 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.548 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.706 V. Piezo Error = -8.6 V.
17-03-17 21:37:38.548 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35934 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35934 (-170.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35930 (-170.3 uncal um), Max = 35939 (-170.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:37:38.548 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35934, posNoise = 5, negNoise = 4
17-03-17 21:37:38.548 -07 000000610 INF: Z Motor: After move to -0.171170, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:38.548 -07 000000610 INF: Z Motor: Settle wait time = 1415 ms, measure time = 107 ms (allowed 150 ms), total time = 1522 ms
17-03-17 21:37:38.548 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:38.598 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms
17-03-17 21:37:38.598 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:38.598 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.171170991113173. ----------
17-03-17 21:37:38.598 -07 000000610 INF: Cycle	53	Tile	6	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:38.598 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37215, sync = True, waitForSettling = True)
17-03-17 21:37:38.598 -07 000000610 INF: Z Motor: Moving to -0.170359 mm, started at -0.171171 mm, distance = 0.81 um
17-03-17 21:37:38.598 -07 000000610 INF: FPGA: Xmit ZDACW 37215\n [Z Motor]
17-03-17 21:37:38.598 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:37:38.608 -07 000000610 INF: FPGA: 'ZDACW 37215' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:38.608 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:38.608 -07 000000459 INF: FPGA: Recv ZDACR 37215
17-03-17 21:37:38.618 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.618 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:38.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.768 -07 000000569 INF: FPGA: Recv ZSGSRD 35810
17-03-17 21:37:38.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:38.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.778 -07 000000480 INF: FPGA: Recv ZSGSRD 35810
17-03-17 21:37:38.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.788 -07 000000382 INF: FPGA: Recv ZSGSRD 35812
17-03-17 21:37:38.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.798 -07 000000431 INF: FPGA: Recv ZSGSRD 35808
17-03-17 21:37:38.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.808 -07 000000012 INF: FPGA: Recv ZSGSRD 35812
17-03-17 21:37:38.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.818 -07 000000501 INF: FPGA: Recv ZSGSRD 35806
17-03-17 21:37:38.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.828 -07 000000547 INF: FPGA: Recv ZSGSRD 35809
17-03-17 21:37:38.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.838 -07 000000627 INF: FPGA: Recv ZSGSRD 35811
17-03-17 21:37:38.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.848 -07 000000476 INF: FPGA: Recv ZSGSRD 35803
17-03-17 21:37:38.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:38.858 -07 000000459 INF: FPGA: Recv ZSGSRD 35811
17-03-17 21:37:38.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.868 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:38.868 -07 000000608 INF: FPGA: Recv ZPIEZORD 31825
17-03-17 21:37:38.878 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:38.878 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.679 V. Piezo Error = -8.8 V.
17-03-17 21:37:38.878 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35809 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35810 (-169.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35803 (-169.5 uncal um), Max = 35812 (-169.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:37:38.878 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35809, posNoise = 3, negNoise = 6
17-03-17 21:37:38.878 -07 000000610 INF: Z Motor: After move to -0.170359, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:38.878 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:38.878 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:38.878 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:38.878 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:38.878 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:38.878 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:38.878 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:38.878 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:38.878 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:38.878 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:38.878 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:38.878 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:37:38.878 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:38.888 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:38.888 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:38.888 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:38.888 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:38.898 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:37:38.898 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:37:38.898 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:37:38.898 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:37:38.898 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37392 150\n [Camera]
17-03-17 21:37:39.098 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:39.538 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:39.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:39.538 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:39.538 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:39.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:39.538 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:39.538 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:39.538 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 21:37:39.548 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:39.548 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:37:39.728 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37392 820
17-03-17 21:37:39.878 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:39.918 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:37:39.918 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:37:39.918 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:39.928 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:39.928 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 21:37:39.928 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:37:39.928 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:39.928 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:37:39.938 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:39.938 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:37:40.088 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:40.088 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:40.088 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:40.088 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:40.088 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:37:40.088 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:40.088 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:40.088 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:40.088 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:40.088 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:37:40.278 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:37:40.278 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:40.278 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37392 150' command took 2 ms to send, 1367 ms to get response, and 1378 ms overall
17-03-17 21:37:40.278 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170898
17-03-17 21:37:40.278 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17090 mm
17-03-17 21:37:40.288 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:40.288 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.997626,
17-03-17 21:37:40.288 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 21:37:40.288 -07 000000608 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-17 21:37:40.288 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 37333, sync = True, waitForSettling = False)
17-03-17 21:37:40.288 -07 000000547 INF: Z Motor: Moving to -0.170900 mm, started at -0.170368 mm, distance = -0.53 um
17-03-17 21:37:40.308 -07 000000547 INF: FPGA: Xmit ZDACW 37333\n [Z Motor]
17-03-17 21:37:40.308 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:37:40.318 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:40.318 -07 000000547 INF: FPGA: 'ZDACW 37333' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 21:37:40.318 -07 000000475 INF: FPGA: Recv YRDPOS 131189
17-03-17 21:37:40.328 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 37 ms overall
17-03-17 21:37:40.328 -07 000000608 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:40.328 -07 000000608 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:40.328 -07 000000608 INF: Y Motor: Moving 1337 steps-11
17-03-17 21:37:40.338 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:40.338 -07 000000501 INF: FPGA: Recv ZDACR 37333
17-03-17 21:37:40.348 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:40.348 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 21:37:40.348 -07 000000547 INF: Z Motor: MoveAbsStepped took 57 ms (did NOT wait for settling yet))
17-03-17 21:37:40.468 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:37:40.468 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:37:40.468 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:40.468 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:40.468 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:37:40.468 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:37:40.468 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:40.478 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:40.478 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:37:40.478 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:37:40.718 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 21:37:40.718 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:37:40.758 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:40.768 -07 000000424 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:37:40.768 -07 000000608 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:40.768 -07 000000608 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:40.768 -07 000000608 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:37:40.768 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.835 mm, average velocity = 2.104 mm/sec
17-03-17 21:37:41.718 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:41.718 -07 000000429 INF: FPGA: Recv YRDPOS 132873
17-03-17 21:37:41.728 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:41.728 -07 000000608 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:41.748 -07 000000608 INF: Y Motor: After move to 64.892609, error = -0.013214, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:41.748 -07 000000608 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:37:41.748 -07 000000608 INF: Y Motor: Moved to 64.8794 after 1461 ms (table move)
17-03-17 21:37:41.748 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170900 mm (DAC = 37333)
17-03-17 21:37:41.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.758 -07 000000459 INF: FPGA: Recv ZSGSRD 35892
17-03-17 21:37:41.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-17 21:37:41.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.758 -07 000000424 INF: FPGA: Recv ZSGSRD 35887
17-03-17 21:37:41.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:41.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.768 -07 000000475 INF: FPGA: Recv ZSGSRD 35890
17-03-17 21:37:41.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.778 -07 000000438 INF: FPGA: Recv ZSGSRD 35901
17-03-17 21:37:41.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.788 -07 000000512 INF: FPGA: Recv ZSGSRD 35897
17-03-17 21:37:41.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.798 -07 000000476 INF: FPGA: Recv ZSGSRD 35901
17-03-17 21:37:41.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.808 -07 000000382 INF: FPGA: Recv ZSGSRD 35892
17-03-17 21:37:41.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.818 -07 000000475 INF: FPGA: Recv ZSGSRD 35887
17-03-17 21:37:41.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.828 -07 000000438 INF: FPGA: Recv ZSGSRD 35893
17-03-17 21:37:41.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:41.838 -07 000000608 INF: FPGA: Recv ZSGSRD 35889
17-03-17 21:37:41.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.848 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:41.848 -07 000000476 INF: FPGA: Recv ZPIEZORD 31969
17-03-17 21:37:41.858 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.858 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.697 V. Piezo Error = -8.7 V.
17-03-17 21:37:41.858 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.9 um, Read 10 ADC samples: Avg = 35893 (-170.0 uncal um), Error = 0.9 uncal um, Median = 35892 (-170.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35887 (-170.0 uncal um), Max = 35901 (-170.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:37:41.858 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35893, posNoise = 8, negNoise = 6
17-03-17 21:37:41.858 -07 000000610 INF: Z Motor: After move to -0.170900, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:41.858 -07 000000610 INF: Z Motor: Settle wait time = 1464 ms, measure time = 103 ms (allowed 150 ms), total time = 1567 ms
17-03-17 21:37:41.858 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:41.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:41.908 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-17 21:37:41.908 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:41.908 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87939453125, Z-position -0.170907598415361. ----------
17-03-17 21:37:41.908 -07 000000610 INF: Cycle	53	Tile	7	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:41.908 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37156, sync = True, waitForSettling = True)
17-03-17 21:37:41.908 -07 000000610 INF: Z Motor: Moving to -0.170089 mm, started at -0.170908 mm, distance = 0.82 um
17-03-17 21:37:41.908 -07 000000610 INF: FPGA: Xmit ZDACW 37156\n [Z Motor]
17-03-17 21:37:41.908 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:37:41.918 -07 000000610 INF: FPGA: 'ZDACW 37156' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:41.918 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:41.918 -07 000000547 INF: FPGA: Recv ZDACR 37156
17-03-17 21:37:41.928 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:41.928 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:42.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.078 -07 000000512 INF: FPGA: Recv ZSGSRD 35768
17-03-17 21:37:42.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 2 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.088 -07 000000458 INF: FPGA: Recv ZSGSRD 35773
17-03-17 21:37:42.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.098 -07 000000438 INF: FPGA: Recv ZSGSRD 35768
17-03-17 21:37:42.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.108 -07 000000627 INF: FPGA: Recv ZSGSRD 35771
17-03-17 21:37:42.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.118 -07 000000476 INF: FPGA: Recv ZSGSRD 35770
17-03-17 21:37:42.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.128 -07 000000512 INF: FPGA: Recv ZSGSRD 35764
17-03-17 21:37:42.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.138 -07 000000458 INF: FPGA: Recv ZSGSRD 35761
17-03-17 21:37:42.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.148 -07 000000438 INF: FPGA: Recv ZSGSRD 35766
17-03-17 21:37:42.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.158 -07 000000608 INF: FPGA: Recv ZSGSRD 35767
17-03-17 21:37:42.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:42.168 -07 000000626 INF: FPGA: Recv ZSGSRD 35767
17-03-17 21:37:42.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.178 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:42.178 -07 000000576 INF: FPGA: Recv ZPIEZORD 31804
17-03-17 21:37:42.188 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:42.188 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.670 V. Piezo Error = -8.8 V.
17-03-17 21:37:42.188 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35768 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35768 (-169.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35761 (-169.2 uncal um), Max = 35773 (-169.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:37:42.188 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35768, posNoise = 5, negNoise = 7
17-03-17 21:37:42.188 -07 000000610 INF: Z Motor: After move to -0.170089, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:42.188 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:42.188 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:42.188 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:42.188 -07 000000459 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:42.188 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:42.188 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:42.188 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:42.188 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:42.188 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:42.188 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:42.188 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:42.188 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:42.188 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:42.188 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:42.188 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:42.188 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:42.198 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:42.198 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:37:42.198 -07 000000459 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:37:42.198 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:37:42.208 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:37:42.208 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37333 150\n [Camera]
17-03-17 21:37:42.408 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:42.838 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:42.838 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:42.838 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:42.838 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:42.838 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:37:42.848 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:42.848 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:42.848 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:42.848 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:42.848 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:37:43.038 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37333 820
17-03-17 21:37:43.188 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:43.228 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:37:43.228 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:37:43.228 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:43.238 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 388 ms.
17-03-17 21:37:43.238 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:37:43.238 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:43.238 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:43.238 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:37:43.238 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:37:43.248 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-17 21:37:43.388 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:43.398 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:43.398 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:43.398 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:43.398 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:37:43.398 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:43.398 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:43.398 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:43.398 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:43.398 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:37:43.588 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:37:43.588 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:43.588 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37333 150' command took 2 ms to send, 1371 ms to get response, and 1378 ms overall
17-03-17 21:37:43.588 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:37:43.588 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87939453125, Z-Position -0.170104571897641. ------
17-03-17 21:37:43.588 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:43.588 -07 000000547 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17660 mm
17-03-17 21:37:43.588 -07 000000547 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:43.598 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:43.598 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:43.598 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 21:37:43.598 -07 000000569 INF: Y Motor: Moving to 65.7226 mm, started at 64.8794 mm, delta = 0.8432 mm
17-03-17 21:37:43.598 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:43.598 -07 000000459 INF: Z Motor: Entering MoveAbsStepped (DAC = 38578, sync = True, waitForSettling = False)
17-03-17 21:37:43.598 -07 000000459 INF: Z Motor: Moving to -0.176599 mm, started at -0.170105 mm, distance = -6.49 um
17-03-17 21:37:43.598 -07 000000576 INF: FPGA: Recv YRDPOS 132873
17-03-17 21:37:43.608 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:43.608 -07 000000569 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:43.608 -07 000000569 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:43.608 -07 000000569 INF: Y Motor: Moving 1349 steps-28
17-03-17 21:37:43.608 -07 000000459 INF: FPGA: Xmit ZDACW 38578\n [Z Motor]
17-03-17 21:37:43.608 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:37:43.618 -07 000000012 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:37:43.618 -07 000000459 INF: FPGA: 'ZDACW 38578' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:37:43.628 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:43.638 -07 000000459 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:43.638 -07 000000429 INF: FPGA: Recv ZDACR 38578
17-03-17 21:37:43.648 -07 000000459 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:37:43.648 -07 000000459 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 21:37:43.778 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:37:43.778 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:37:43.778 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:43.778 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:37:43.778 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:37:43.778 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:43.778 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:37:43.778 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:37:43.778 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:37:43.788 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:37:43.818 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:37:43.818 -07 000000012 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-17 21:37:43.998 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:37:43.998 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:37:44.038 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:44.048 -07 000000424 INF: FPGA: Recv YRDPOS 134582
17-03-17 21:37:44.048 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:37:44.048 -07 000000569 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:44.048 -07 000000569 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 21:37:44.048 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.124 mm/sec
17-03-17 21:37:44.998 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:44.998 -07 000000424 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:37:45.008 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:45.008 -07 000000569 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:45.028 -07 000000569 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:45.028 -07 000000569 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:37:45.028 -07 000000569 INF: Y Motor: Moved to 65.7144 after 1436 ms (table move)
17-03-17 21:37:45.038 -07 000000547 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176599 mm (DAC = 38578)
17-03-17 21:37:45.038 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.038 -07 000000480 INF: FPGA: Recv ZSGSRD 36776
17-03-17 21:37:45.048 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.048 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.048 -07 000000429 INF: FPGA: Recv ZSGSRD 36774
17-03-17 21:37:45.058 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.058 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.058 -07 000000382 INF: FPGA: Recv ZSGSRD 36781
17-03-17 21:37:45.068 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.068 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.068 -07 000000576 INF: FPGA: Recv ZSGSRD 36785
17-03-17 21:37:45.078 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.078 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.078 -07 000000626 INF: FPGA: Recv ZSGSRD 36781
17-03-17 21:37:45.088 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.088 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.088 -07 000000608 INF: FPGA: Recv ZSGSRD 36783
17-03-17 21:37:45.098 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.098 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.098 -07 000000438 INF: FPGA: Recv ZSGSRD 36775
17-03-17 21:37:45.108 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.108 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.108 -07 000000382 INF: FPGA: Recv ZSGSRD 36773
17-03-17 21:37:45.118 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.118 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.118 -07 000000576 INF: FPGA: Recv ZSGSRD 36774
17-03-17 21:37:45.128 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.128 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.128 -07 000000424 INF: FPGA: Recv ZSGSRD 36781
17-03-17 21:37:45.138 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.138 -07 000000547 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:45.138 -07 000000512 INF: FPGA: Recv ZPIEZORD 33183
17-03-17 21:37:45.148 -07 000000547 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.148 -07 000000547 INF: Z Motor: Piezo is near 50.9 V (nominally 0 to 100 V), expect near 58.9 V, since DAC is at 5.887 V. Piezo Error = -8.0 V.
17-03-17 21:37:45.148 -07 000000547 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.6 um, Read 10 ADC samples: Avg = 36778 (-175.7 uncal um), Error = 0.9 uncal um, Median = 36778 (-175.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36773 (-175.7 uncal um), Max = 36785 (-175.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:37:45.148 -07 000000547 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36778, posNoise = 7, negNoise = 5
17-03-17 21:37:45.148 -07 000000547 INF: Z Motor: After move to -0.176599, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:45.148 -07 000000547 INF: Z Motor: Settle wait time = 1439 ms, measure time = 111 ms (allowed 150 ms), total time = 1550 ms
17-03-17 21:37:45.148 -07 000000547 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:45.188 -07 000000547 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-17 21:37:45.188 -07 000000547 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:45.188 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:45.188 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:45.188 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:45.188 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:45.188 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:37:45.188 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:45.188 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:45.188 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:37:45.198 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:37:45.198 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:37:45.198 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 21:37:45.198 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 21:37:45.208 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:37:45.248 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:37:45.448 -07 000000012 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:37:45.448 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:37:45.448 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:37:45.448 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) start.
17-03-17 21:37:45.488 -07 000000431 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:37:45.488 -07 000000626 INF: FPGA: Recv CAMSNAP
17-03-17 21:37:45.488 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 277 ms to get response, and 284 ms overall
17-03-17 21:37:45.568 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) end. Duration was 113 ms.
17-03-17 21:37:45.568 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:45.568 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:37:45.568 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 116 ms.
17-03-17 21:37:45.588 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:45.588 -07 000000438 INF: Autofocus start
17-03-17 21:37:45.588 -07 000000438 INF: MeasureProfile start
17-03-17 21:37:45.588 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:45.598 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:45.598 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:37:45.598 -07 000000438 INF: MeasureProfile done
17-03-17 21:37:45.598 -07 000000438 INF: X=64  Z correction [um]=0.2557664
17-03-17 21:37:45.598 -07 000000438 INF: Autofocus finished
17-03-17 21:37:45.688 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.011254,
17-03-17 21:37:45.798 -07 000000415 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:37:45.798 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 21:37:45.798 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.176593026160819. ----------
17-03-17 21:37:45.808 -07 000000610 INF: Cycle	53	Tile	8	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:45.808 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37146, sync = True, waitForSettling = True)
17-03-17 21:37:45.808 -07 000000610 INF: Z Motor: Moving to -0.170043 mm, started at -0.176593 mm, distance = 6.55 um
17-03-17 21:37:45.808 -07 000000610 INF: FPGA: Xmit ZDACW 37146\n [Z Motor]
17-03-17 21:37:45.808 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:37:45.818 -07 000000610 INF: FPGA: 'ZDACW 37146' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:37:45.818 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:45.818 -07 000000459 INF: FPGA: Recv ZDACR 37146
17-03-17 21:37:45.828 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.828 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:45.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.978 -07 000000512 INF: FPGA: Recv ZSGSRD 35756
17-03-17 21:37:45.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:45.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.988 -07 000000431 INF: FPGA: Recv ZSGSRD 35757
17-03-17 21:37:45.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:45.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:45.998 -07 000000382 INF: FPGA: Recv ZSGSRD 35757
17-03-17 21:37:46.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:46.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.008 -07 000000476 INF: FPGA: Recv ZSGSRD 35762
17-03-17 21:37:46.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:46.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.018 -07 000000459 INF: FPGA: Recv ZSGSRD 35761
17-03-17 21:37:46.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:46.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.028 -07 000000608 INF: FPGA: Recv ZSGSRD 35761
17-03-17 21:37:46.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:46.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.048 -07 000000382 INF: FPGA: Recv ZSGSRD 35757
17-03-17 21:37:46.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:46.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.068 -07 000000429 INF: FPGA: Recv ZSGSRD 35759
17-03-17 21:37:46.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:46.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.088 -07 000000626 INF: FPGA: Recv ZSGSRD 35763
17-03-17 21:37:46.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:46.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:46.108 -07 000000576 INF: FPGA: Recv ZSGSRD 35762
17-03-17 21:37:46.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:46.118 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:46.118 -07 000000415 INF: FPGA: Recv ZPIEZORD 31788
17-03-17 21:37:46.128 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:46.128 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.668 V. Piezo Error = -8.8 V.
17-03-17 21:37:46.128 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35760 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35760 (-169.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35756 (-169.2 uncal um), Max = 35763 (-169.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:37:46.128 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35760, posNoise = 3, negNoise = 4
17-03-17 21:37:46.128 -07 000000610 INF: Z Motor: After move to -0.170043, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:46.128 -07 000000610 INF: Z Motor: MoveAbsStepped took 316 ms)
17-03-17 21:37:46.128 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:46.128 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:46.128 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:46.128 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:46.128 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:46.128 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:46.128 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:46.128 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:46.128 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:46.128 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:46.128 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:46.128 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:46.138 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:37:46.138 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:46.138 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:46.138 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:46.148 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:37:46.148 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:37:46.148 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:37:46.148 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:37:46.148 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37323 150\n [Camera]
17-03-17 21:37:46.348 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:46.788 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:46.788 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:46.788 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:46.788 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:46.788 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-17 21:37:46.788 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:46.788 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:46.788 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:46.788 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:46.788 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-17 21:37:46.898 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:46.978 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37323 820
17-03-17 21:37:47.128 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:47.178 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:37:47.178 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:37:47.178 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:47.178 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 21:37:47.178 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:37:47.178 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:47.178 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:37:47.178 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:37:47.178 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:37:47.188 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:37:47.338 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:47.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:47.338 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:47.338 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:47.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:47.338 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:47.348 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:47.348 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:37:47.348 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:47.348 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:37:47.528 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:37:47.528 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:47.528 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37323 150' command took 2 ms to send, 1377 ms to get response, and 1380 ms overall
17-03-17 21:37:47.528 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.170589
17-03-17 21:37:47.528 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17059 mm
17-03-17 21:37:47.528 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:47.538 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 21:37:47.538 -07 000000569 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-17 21:37:47.538 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:47.538 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 37265, sync = True, waitForSettling = False)
17-03-17 21:37:47.538 -07 000000476 INF: Z Motor: Moving to -0.170588 mm, started at -0.170053 mm, distance = -0.54 um
17-03-17 21:37:47.538 -07 000000547 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:37:47.548 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:37:47.548 -07 000000569 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:47.548 -07 000000569 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:47.548 -07 000000569 INF: Y Motor: Moving 1341 steps-18
17-03-17 21:37:47.548 -07 000000476 INF: FPGA: Xmit ZDACW 37265\n [Z Motor]
17-03-17 21:37:47.548 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 21:37:47.558 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:47.558 -07 000000476 INF: FPGA: 'ZDACW 37265' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:37:47.568 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:47.568 -07 000000458 INF: FPGA: Recv ZDACR 37265
17-03-17 21:37:47.578 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:47.578 -07 000000476 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-17 21:37:47.718 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:37:47.718 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:37:47.718 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:47.718 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:37:47.718 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:37:47.728 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:47.728 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:47.728 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 9 ms.
17-03-17 21:37:47.728 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:37:47.738 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:37:47.928 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 21:37:47.928 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-17 21:37:47.968 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:47.968 -07 000000626 INF: FPGA: Recv YRDPOS 136272
17-03-17 21:37:47.978 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:47.978 -07 000000569 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:47.978 -07 000000569 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:37:47.978 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.838 mm, average velocity = 2.160 mm/sec
17-03-17 21:37:48.928 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:48.928 -07 000000475 INF: FPGA: Recv YRDPOS 136272
17-03-17 21:37:48.938 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:48.938 -07 000000569 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:48.958 -07 000000569 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:48.958 -07 000000569 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:48.958 -07 000000569 INF: Y Motor: Moved to 66.5391 after 1422 ms (table move)
17-03-17 21:37:48.958 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170588 mm (DAC = 37265)
17-03-17 21:37:48.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:48.968 -07 000000576 INF: FPGA: Recv ZSGSRD 35850
17-03-17 21:37:48.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:37:48.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:48.968 -07 000000424 INF: FPGA: Recv ZSGSRD 35843
17-03-17 21:37:48.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:37:48.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:48.978 -07 000000012 INF: FPGA: Recv ZSGSRD 35853
17-03-17 21:37:48.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:48.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:48.988 -07 000000627 INF: FPGA: Recv ZSGSRD 35852
17-03-17 21:37:48.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:48.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:48.998 -07 000000569 INF: FPGA: Recv ZSGSRD 35842
17-03-17 21:37:49.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.008 -07 000000501 INF: FPGA: Recv ZSGSRD 35842
17-03-17 21:37:49.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.018 -07 000000626 INF: FPGA: Recv ZSGSRD 35838
17-03-17 21:37:49.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.028 -07 000000431 INF: FPGA: Recv ZSGSRD 35843
17-03-17 21:37:49.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.038 -07 000000627 INF: FPGA: Recv ZSGSRD 35840
17-03-17 21:37:49.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.048 -07 000000480 INF: FPGA: Recv ZSGSRD 35841
17-03-17 21:37:49.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.058 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:49.058 -07 000000501 INF: FPGA: Recv ZPIEZORD 31909
17-03-17 21:37:49.068 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.068 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.686 V. Piezo Error = -8.7 V.
17-03-17 21:37:49.068 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35844 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35842 (-169.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35838 (-169.7 uncal um), Max = 35853 (-169.8 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:37:49.068 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35844, posNoise = 9, negNoise = 6
17-03-17 21:37:49.068 -07 000000610 INF: Z Motor: After move to -0.170588, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:49.068 -07 000000610 INF: Z Motor: Settle wait time = 1425 ms, measure time = 101 ms (allowed 150 ms), total time = 1526 ms
17-03-17 21:37:49.068 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:49.118 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1580 ms
17-03-17 21:37:49.118 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:49.118 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.170592812020415. ----------
17-03-17 21:37:49.118 -07 000000610 INF: Cycle	53	Tile	9	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:49.118 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37088, sync = True, waitForSettling = True)
17-03-17 21:37:49.118 -07 000000610 INF: Z Motor: Moving to -0.169778 mm, started at -0.170593 mm, distance = 0.81 um
17-03-17 21:37:49.118 -07 000000610 INF: FPGA: Xmit ZDACW 37088\n [Z Motor]
17-03-17 21:37:49.118 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:37:49.128 -07 000000610 INF: FPGA: 'ZDACW 37088' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:49.128 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:49.128 -07 000000415 INF: FPGA: Recv ZDACR 37088
17-03-17 21:37:49.138 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.138 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:49.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.288 -07 000000627 INF: FPGA: Recv ZSGSRD 35722
17-03-17 21:37:49.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.298 -07 000000459 INF: FPGA: Recv ZSGSRD 35728
17-03-17 21:37:49.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.308 -07 000000576 INF: FPGA: Recv ZSGSRD 35721
17-03-17 21:37:49.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.318 -07 000000626 INF: FPGA: Recv ZSGSRD 35716
17-03-17 21:37:49.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.328 -07 000000012 INF: FPGA: Recv ZSGSRD 35716
17-03-17 21:37:49.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.338 -07 000000429 INF: FPGA: Recv ZSGSRD 35718
17-03-17 21:37:49.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.348 -07 000000476 INF: FPGA: Recv ZSGSRD 35721
17-03-17 21:37:49.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.358 -07 000000475 INF: FPGA: Recv ZSGSRD 35711
17-03-17 21:37:49.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.368 -07 000000569 INF: FPGA: Recv ZSGSRD 35719
17-03-17 21:37:49.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:49.378 -07 000000415 INF: FPGA: Recv ZSGSRD 35726
17-03-17 21:37:49.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.388 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:49.388 -07 000000429 INF: FPGA: Recv ZPIEZORD 31767
17-03-17 21:37:49.398 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:49.398 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.659 V. Piezo Error = -8.7 V.
17-03-17 21:37:49.398 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35720 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35720 (-168.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35711 (-168.9 uncal um), Max = 35728 (-169.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:37:49.398 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35720, posNoise = 8, negNoise = 9
17-03-17 21:37:49.398 -07 000000610 INF: Z Motor: After move to -0.169778, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:49.398 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:49.398 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:49.398 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:49.398 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:49.398 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:49.398 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:49.398 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:49.398 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:49.398 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:49.398 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:49.398 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:49.398 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:37:49.398 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:49.408 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 5 ms.
17-03-17 21:37:49.408 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:49.408 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:49.408 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:49.418 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:37:49.418 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:37:49.418 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:37:49.418 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:37:49.418 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37265 150\n [Camera]
17-03-17 21:37:49.618 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:50.048 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:50.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:50.048 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:50.048 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:50.048 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-17 21:37:50.058 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:50.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:50.058 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:50.058 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:50.058 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:37:50.248 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37265 820
17-03-17 21:37:50.388 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:50.428 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:37:50.428 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:37:50.428 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:50.438 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:50.438 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 21:37:50.438 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:37:50.438 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:50.438 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:50.438 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:37:50.448 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:37:50.598 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:50.608 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:50.608 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:50.718 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:50.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:50.718 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:50.718 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:50.728 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:37:50.728 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:50.728 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:37:50.798 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:37:50.798 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:50.798 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37265 150' command took 2 ms to send, 1371 ms to get response, and 1378 ms overall
17-03-17 21:37:50.798 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170493
17-03-17 21:37:50.798 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17049 mm
17-03-17 21:37:50.798 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:50.798 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 21:37:50.798 -07 000000382 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-17 21:37:50.798 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:50.798 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 37244, sync = True, waitForSettling = False)
17-03-17 21:37:50.798 -07 000000569 INF: Z Motor: Moving to -0.170492 mm, started at -0.169796 mm, distance = -0.70 um
17-03-17 21:37:50.798 -07 000000438 INF: FPGA: Recv YRDPOS 136273
17-03-17 21:37:50.808 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:50.808 -07 000000382 INF: Y Motor: Encoder = 136273 = motor step 106463.3 = 66.5396 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:50.808 -07 000000569 INF: FPGA: Xmit ZDACW 37244\n [Z Motor]
17-03-17 21:37:50.808 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:37:50.808 -07 000000382 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:50.808 -07 000000382 INF: Y Motor: Moving 1349 steps-28
17-03-17 21:37:50.818 -07 000000569 INF: FPGA: 'ZDACW 37244' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:37:50.818 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:50.828 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:50.828 -07 000000608 INF: FPGA: Recv ZDACR 37244
17-03-17 21:37:50.838 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:50.838 -07 000000569 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-17 21:37:51.048 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.02213,
17-03-17 21:37:51.108 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 21:37:51.108 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:37:51.108 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:51.108 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 21:37:51.108 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:37:51.108 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:51.118 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:51.118 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:51.118 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 510 ms.
17-03-17 21:37:51.118 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:37:51.188 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:37:51.188 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-17 21:37:51.228 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:51.228 -07 000000431 INF: FPGA: Recv YRDPOS 137978
17-03-17 21:37:51.238 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:51.238 -07 000000382 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:51.238 -07 000000382 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-17 21:37:51.238 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.844 mm, average velocity = 2.197 mm/sec
17-03-17 21:37:51.898 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:51.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:52.188 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:52.188 -07 000000512 INF: FPGA: Recv YRDPOS 137978
17-03-17 21:37:52.198 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:52.198 -07 000000382 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:52.218 -07 000000382 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:52.218 -07 000000382 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:52.218 -07 000000382 INF: Y Motor: Moved to 67.3721 after 1417 ms (table move)
17-03-17 21:37:52.218 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170492 mm (DAC = 37244)
17-03-17 21:37:52.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.218 -07 000000627 INF: FPGA: Recv ZSGSRD 35828
17-03-17 21:37:52.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:52.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.228 -07 000000458 INF: FPGA: Recv ZSGSRD 35829
17-03-17 21:37:52.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.238 -07 000000012 INF: FPGA: Recv ZSGSRD 35830
17-03-17 21:37:52.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.248 -07 000000458 INF: FPGA: Recv ZSGSRD 35833
17-03-17 21:37:52.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:52.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.258 -07 000000382 INF: FPGA: Recv ZSGSRD 35818
17-03-17 21:37:52.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.268 -07 000000438 INF: FPGA: Recv ZSGSRD 35828
17-03-17 21:37:52.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.278 -07 000000501 INF: FPGA: Recv ZSGSRD 35831
17-03-17 21:37:52.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.288 -07 000000547 INF: FPGA: Recv ZSGSRD 35830
17-03-17 21:37:52.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.298 -07 000000626 INF: FPGA: Recv ZSGSRD 35822
17-03-17 21:37:52.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.308 -07 000000429 INF: FPGA: Recv ZSGSRD 35831
17-03-17 21:37:52.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.318 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:52.318 -07 000000459 INF: FPGA: Recv ZPIEZORD 31886
17-03-17 21:37:52.328 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.328 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.683 V. Piezo Error = -8.7 V.
17-03-17 21:37:52.328 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35828 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35830 (-169.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35818 (-169.6 uncal um), Max = 35833 (-169.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:37:52.328 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35828, posNoise = 5, negNoise = 10
17-03-17 21:37:52.328 -07 000000610 INF: Z Motor: After move to -0.170492, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:52.328 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 105 ms (allowed 150 ms), total time = 1524 ms
17-03-17 21:37:52.328 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:52.378 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms
17-03-17 21:37:52.378 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:52.378 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.170490024626147. ----------
17-03-17 21:37:52.378 -07 000000610 INF: Cycle	53	Tile	10	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:52.378 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37067, sync = True, waitForSettling = True)
17-03-17 21:37:52.378 -07 000000610 INF: Z Motor: Moving to -0.169682 mm, started at -0.170490 mm, distance = 0.81 um
17-03-17 21:37:52.378 -07 000000610 INF: FPGA: Xmit ZDACW 37067\n [Z Motor]
17-03-17 21:37:52.378 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 21:37:52.388 -07 000000610 INF: FPGA: 'ZDACW 37067' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:52.388 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:52.388 -07 000000382 INF: FPGA: Recv ZDACR 37067
17-03-17 21:37:52.398 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.398 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:52.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.548 -07 000000438 INF: FPGA: Recv ZSGSRD 35704
17-03-17 21:37:52.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:52.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.558 -07 000000480 INF: FPGA: Recv ZSGSRD 35700
17-03-17 21:37:52.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.568 -07 000000459 INF: FPGA: Recv ZSGSRD 35706
17-03-17 21:37:52.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.578 -07 000000608 INF: FPGA: Recv ZSGSRD 35706
17-03-17 21:37:52.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.588 -07 000000547 INF: FPGA: Recv ZSGSRD 35703
17-03-17 21:37:52.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.598 -07 000000431 INF: FPGA: Recv ZSGSRD 35704
17-03-17 21:37:52.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.608 -07 000000501 INF: FPGA: Recv ZSGSRD 35695
17-03-17 21:37:52.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.618 -07 000000012 INF: FPGA: Recv ZSGSRD 35706
17-03-17 21:37:52.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.628 -07 000000424 INF: FPGA: Recv ZSGSRD 35705
17-03-17 21:37:52.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:52.638 -07 000000576 INF: FPGA: Recv ZSGSRD 35708
17-03-17 21:37:52.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.648 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:52.648 -07 000000438 INF: FPGA: Recv ZPIEZORD 31729
17-03-17 21:37:52.658 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:52.658 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.656 V. Piezo Error = -8.8 V.
17-03-17 21:37:52.658 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35704 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35704 (-168.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35695 (-168.8 uncal um), Max = 35708 (-168.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:37:52.658 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35704, posNoise = 4, negNoise = 9
17-03-17 21:37:52.658 -07 000000610 INF: Z Motor: After move to -0.169682, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:52.658 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:37:52.658 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:52.658 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:52.658 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:52.658 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:52.658 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:52.658 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:52.658 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:52.658 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:52.658 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:52.658 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:52.658 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:52.658 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:52.668 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:37:52.668 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:52.668 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:52.668 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:52.678 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:37:52.678 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:37:52.678 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:37:52.678 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:37:52.678 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37244 150\n [Camera]
17-03-17 21:37:52.878 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:53.318 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:53.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:53.318 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:53.318 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:53.318 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-17 21:37:53.318 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:53.318 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:53.318 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:53.318 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:53.318 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:37:53.508 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37244 820
17-03-17 21:37:53.658 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:53.698 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 21:37:53.698 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 21:37:53.698 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:53.698 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:37:53.698 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:37:53.698 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:53.698 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:53.698 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:53.698 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:37:53.708 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:37:53.868 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:53.868 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:53.868 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:53.868 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:53.868 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:37:53.868 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:53.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:53.878 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:53.878 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:53.878 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:37:54.058 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:37:54.058 -07 000000476 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:54.058 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37244 150' command took 2 ms to send, 1368 ms to get response, and 1378 ms overall
17-03-17 21:37:54.058 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.170024
17-03-17 21:37:54.068 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17002 mm
17-03-17 21:37:54.068 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:54.068 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 21:37:54.068 -07 000000382 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-17 21:37:54.068 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:54.068 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37142, sync = True, waitForSettling = False)
17-03-17 21:37:54.068 -07 000000512 INF: Z Motor: Moving to -0.170025 mm, started at -0.169693 mm, distance = -0.33 um
17-03-17 21:37:54.068 -07 000000431 INF: FPGA: Recv YRDPOS 137979
17-03-17 21:37:54.078 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:37:54.078 -07 000000512 INF: FPGA: Xmit ZDACW 37142\n [Z Motor]
17-03-17 21:37:54.078 -07 000000382 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:54.078 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:37:54.078 -07 000000382 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:54.078 -07 000000382 INF: Y Motor: Moving 1344 steps-22
17-03-17 21:37:54.088 -07 000000512 INF: FPGA: 'ZDACW 37142' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:37:54.088 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:54.098 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:54.098 -07 000000608 INF: FPGA: Recv ZDACR 37142
17-03-17 21:37:54.108 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:54.108 -07 000000512 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-17 21:37:54.258 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:37:54.258 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:37:54.258 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:54.258 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 21:37:54.258 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:37:54.258 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:54.268 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:54.268 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:37:54.268 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:54.278 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:37:54.468 -07 000000459 INF: FPGA: Recv YMVTILE
17-03-17 21:37:54.468 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 386 ms overall
17-03-17 21:37:54.508 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:54.508 -07 000000480 INF: FPGA: Recv YRDPOS 139684
17-03-17 21:37:54.518 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:54.518 -07 000000382 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:54.518 -07 000000382 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:37:54.518 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.841 mm, average velocity = 2.178 mm/sec
17-03-17 21:37:55.468 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:55.468 -07 000000415 INF: FPGA: Recv YRDPOS 139684
17-03-17 21:37:55.478 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.478 -07 000000382 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:55.498 -07 000000382 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:55.498 -07 000000382 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:55.498 -07 000000382 INF: Y Motor: Moved to 68.2051 after 1427 ms (table move)
17-03-17 21:37:55.498 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170025 mm (DAC = 37142)
17-03-17 21:37:55.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.498 -07 000000501 INF: FPGA: Recv ZSGSRD 35761
17-03-17 21:37:55.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:55.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.508 -07 000000458 INF: FPGA: Recv ZSGSRD 35758
17-03-17 21:37:55.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.518 -07 000000438 INF: FPGA: Recv ZSGSRD 35761
17-03-17 21:37:55.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.528 -07 000000415 INF: FPGA: Recv ZSGSRD 35758
17-03-17 21:37:55.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.538 -07 000000569 INF: FPGA: Recv ZSGSRD 35758
17-03-17 21:37:55.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.548 -07 000000501 INF: FPGA: Recv ZSGSRD 35753
17-03-17 21:37:55.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.558 -07 000000547 INF: FPGA: Recv ZSGSRD 35762
17-03-17 21:37:55.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.568 -07 000000626 INF: FPGA: Recv ZSGSRD 35760
17-03-17 21:37:55.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.578 -07 000000459 INF: FPGA: Recv ZSGSRD 35758
17-03-17 21:37:55.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.588 -07 000000608 INF: FPGA: Recv ZSGSRD 35762
17-03-17 21:37:55.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:55.598 -07 000000429 INF: FPGA: Recv ZPIEZORD 31842
17-03-17 21:37:55.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.608 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.668 V. Piezo Error = -8.7 V.
17-03-17 21:37:55.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35759 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35759 (-169.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35753 (-169.1 uncal um), Max = 35762 (-169.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:37:55.608 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35759, posNoise = 3, negNoise = 6
17-03-17 21:37:55.608 -07 000000610 INF: Z Motor: After move to -0.170025, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:55.608 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 106 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:37:55.608 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:55.658 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-17 21:37:55.658 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:55.658 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.170046753988365. ----------
17-03-17 21:37:55.658 -07 000000610 INF: Cycle	53	Tile	11	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:55.658 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36965, sync = True, waitForSettling = True)
17-03-17 21:37:55.658 -07 000000610 INF: Z Motor: Moving to -0.169215 mm, started at -0.170047 mm, distance = 0.83 um
17-03-17 21:37:55.658 -07 000000610 INF: FPGA: Xmit ZDACW 36965\n [Z Motor]
17-03-17 21:37:55.658 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:37:55.668 -07 000000610 INF: FPGA: 'ZDACW 36965' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:55.668 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:55.668 -07 000000512 INF: FPGA: Recv ZDACR 36965
17-03-17 21:37:55.678 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.678 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:55.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.828 -07 000000012 INF: FPGA: Recv ZSGSRD 35628
17-03-17 21:37:55.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:55.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.838 -07 000000480 INF: FPGA: Recv ZSGSRD 35639
17-03-17 21:37:55.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.848 -07 000000429 INF: FPGA: Recv ZSGSRD 35628
17-03-17 21:37:55.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.858 -07 000000547 INF: FPGA: Recv ZSGSRD 35634
17-03-17 21:37:55.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.868 -07 000000438 INF: FPGA: Recv ZSGSRD 35632
17-03-17 21:37:55.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.878 -07 000000415 INF: FPGA: Recv ZSGSRD 35627
17-03-17 21:37:55.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.888 -07 000000569 INF: FPGA: Recv ZSGSRD 35634
17-03-17 21:37:55.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.898 -07 000000512 INF: FPGA: Recv ZSGSRD 35632
17-03-17 21:37:55.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.908 -07 000000012 INF: FPGA: Recv ZSGSRD 35628
17-03-17 21:37:55.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:55.918 -07 000000438 INF: FPGA: Recv ZSGSRD 35628
17-03-17 21:37:55.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:55.928 -07 000000415 INF: FPGA: Recv ZPIEZORD 31609
17-03-17 21:37:55.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:55.938 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.640 V. Piezo Error = -8.9 V.
17-03-17 21:37:55.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35631 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35630 (-168.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35627 (-168.3 uncal um), Max = 35639 (-168.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:37:55.938 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35631, posNoise = 8, negNoise = 4
17-03-17 21:37:55.938 -07 000000610 INF: Z Motor: After move to -0.169215, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:55.938 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:37:55.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:55.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:55.938 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:55.938 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:55.938 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:55.938 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:55.938 -07 000000459 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:55.938 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:55.938 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:55.938 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:55.938 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:37:55.938 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:55.948 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:37:55.948 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:55.948 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:37:55.948 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:55.958 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:37:55.958 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:37:55.958 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:37:55.958 -07 000000459 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:37:55.958 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37142 150\n [Camera]
17-03-17 21:37:56.158 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:37:56.408 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.014009,
17-03-17 21:37:56.598 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:37:56.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:37:56.598 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:56.598 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:56.598 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:37:56.598 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:37:56.598 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:37:56.598 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:56.718 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:56.718 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:37:56.788 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37142 820
17-03-17 21:37:56.898 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:37:56.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:37:56.938 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:37:56.988 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 21:37:56.988 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:37:56.988 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:56.988 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:56.988 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:37:57.088 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 21:37:57.088 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:37:57.088 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:57.098 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:37:57.098 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 499 ms.
17-03-17 21:37:57.148 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:37:57.148 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:37:57.148 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:37:57.148 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:37:57.148 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:37:57.158 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:37:57.158 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:37:57.158 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) start.
17-03-17 21:37:57.158 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:37:57.158 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:37:57.338 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:37:57.338 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:37:57.338 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37142 150' command took 2 ms to send, 1367 ms to get response, and 1378 ms overall
17-03-17 21:37:57.348 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:37:57.348 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.205078125, Z-Position -0.16922445483422. ------
17-03-17 21:37:57.348 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:57.348 -07 000000415 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17581 mm
17-03-17 21:37:57.348 -07 000000415 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:37:57.348 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:57.348 -07 000000459 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 21:37:57.348 -07 000000459 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-17 21:37:57.358 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:37:57.358 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 38407, sync = True, waitForSettling = False)
17-03-17 21:37:57.358 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:57.358 -07 000000569 INF: Z Motor: Moving to -0.175816 mm, started at -0.169224 mm, distance = -6.59 um
17-03-17 21:37:57.358 -07 000000431 INF: FPGA: Recv YRDPOS 139684
17-03-17 21:37:57.368 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:57.368 -07 000000459 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:57.368 -07 000000459 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:37:57.368 -07 000000459 INF: Y Motor: Moving 1340 steps-15
17-03-17 21:37:57.368 -07 000000547 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:37:57.378 -07 000000569 INF: FPGA: Xmit ZDACW 38407\n [Z Motor]
17-03-17 21:37:57.378 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:37:57.388 -07 000000459 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:37:57.388 -07 000000569 INF: FPGA: 'ZDACW 38407' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:37:57.398 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:57.398 -07 000000480 INF: FPGA: Recv ZDACR 38407
17-03-17 21:37:57.408 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:37:57.408 -07 000000569 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 21:37:57.528 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:37:57.528 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:37:57.528 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:57.538 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 656674232, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:37:57.538 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:37:57.538 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:57.538 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:57.538 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:37:57.538 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:37:57.548 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:37:57.568 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:37:57.568 -07 000000547 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 214 ms overall
17-03-17 21:37:57.758 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 21:37:57.758 -07 000000459 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:37:57.798 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:57.798 -07 000000458 INF: FPGA: Recv YRDPOS 141368
17-03-17 21:37:57.808 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:57.808 -07 000000459 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:57.808 -07 000000459 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 21:37:57.808 -07 000000459 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.104 mm/sec
17-03-17 21:37:58.758 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:37:58.758 -07 000000424 INF: FPGA: Recv YRDPOS 141368
17-03-17 21:37:58.768 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.768 -07 000000459 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:37:58.788 -07 000000459 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:37:58.788 -07 000000459 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:37:58.788 -07 000000459 INF: Y Motor: Moved to 69.0273 after 1434 ms (table move)
17-03-17 21:37:58.788 -07 000000415 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175816 mm (DAC = 38407)
17-03-17 21:37:58.788 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.798 -07 000000501 INF: FPGA: Recv ZSGSRD 36656
17-03-17 21:37:58.798 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:37:58.798 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.798 -07 000000547 INF: FPGA: Recv ZSGSRD 36664
17-03-17 21:37:58.808 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:37:58.808 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.808 -07 000000382 INF: FPGA: Recv ZSGSRD 36661
17-03-17 21:37:58.818 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.818 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.818 -07 000000429 INF: FPGA: Recv ZSGSRD 36663
17-03-17 21:37:58.828 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.828 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.828 -07 000000476 INF: FPGA: Recv ZSGSRD 36662
17-03-17 21:37:58.838 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.838 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.838 -07 000000459 INF: FPGA: Recv ZSGSRD 36662
17-03-17 21:37:58.848 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.848 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.848 -07 000000431 INF: FPGA: Recv ZSGSRD 36654
17-03-17 21:37:58.858 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.858 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.858 -07 000000480 INF: FPGA: Recv ZSGSRD 36658
17-03-17 21:37:58.868 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.868 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.868 -07 000000429 INF: FPGA: Recv ZSGSRD 36643
17-03-17 21:37:58.878 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.878 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:58.878 -07 000000547 INF: FPGA: Recv ZSGSRD 36656
17-03-17 21:37:58.888 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.888 -07 000000415 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:58.888 -07 000000627 INF: FPGA: Recv ZPIEZORD 33036
17-03-17 21:37:58.898 -07 000000415 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:58.898 -07 000000415 INF: Z Motor: Piezo is near 50.6 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.861 V. Piezo Error = -8.0 V.
17-03-17 21:37:58.898 -07 000000415 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.8 um, Read 10 ADC samples: Avg = 36658 (-174.9 uncal um), Error = 0.9 uncal um, Median = 36660 (-174.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 36643 (-174.8 uncal um), Max = 36664 (-175.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 15 (0.1 uncal um)
17-03-17 21:37:58.898 -07 000000415 INF: Z Motor: ADC noise = 15, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36658, posNoise = 6, negNoise = 15
17-03-17 21:37:58.898 -07 000000415 INF: Z Motor: After move to -0.175816, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:58.898 -07 000000415 INF: Z Motor: Settle wait time = 1438 ms, measure time = 102 ms (allowed 150 ms), total time = 1540 ms
17-03-17 21:37:58.898 -07 000000415 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:37:58.948 -07 000000415 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-17 21:37:58.948 -07 000000415 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:37:58.948 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:58.948 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:58.948 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:37:58.948 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:58.948 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:58.948 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:37:58.948 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:37:58.948 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:58.958 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:37:58.958 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:37:58.958 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 21:37:58.958 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 21:37:58.968 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:37:59.008 -07 000000480 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:37:59.208 -07 000000569 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:37:59.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:37:59.208 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:37:59.208 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) start.
17-03-17 21:37:59.248 -07 000000438 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:37:59.248 -07 000000458 INF: FPGA: Recv CAMSNAP
17-03-17 21:37:59.248 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 284 ms overall
17-03-17 21:37:59.328 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 21:37:59.328 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:37:59.328 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:37:59.328 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 21:37:59.348 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:37:59.348 -07 000000459 INF: Autofocus start
17-03-17 21:37:59.348 -07 000000459 INF: MeasureProfile start
17-03-17 21:37:59.358 -07 000000627 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:37:59.358 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:59.358 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:37:59.368 -07 000000459 INF: MeasureProfile done
17-03-17 21:37:59.368 -07 000000459 INF: X=0  Z correction [um]=-0.0713522
17-03-17 21:37:59.368 -07 000000459 INF: Autofocus finished
17-03-17 21:37:59.558 -07 000000424 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:37:59.558 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 197 ms to get response, and 206 ms overall
17-03-17 21:37:59.568 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.175822120703808. ----------
17-03-17 21:37:59.568 -07 000000610 INF: Cycle	53	Tile	12	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:37:59.568 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36904, sync = True, waitForSettling = True)
17-03-17 21:37:59.568 -07 000000610 INF: Z Motor: Moving to -0.168936 mm, started at -0.175822 mm, distance = 6.89 um
17-03-17 21:37:59.568 -07 000000610 INF: FPGA: Xmit ZDACW 36904\n [Z Motor]
17-03-17 21:37:59.568 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 21:37:59.578 -07 000000610 INF: FPGA: 'ZDACW 36904' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:37:59.578 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:37:59.578 -07 000000475 INF: FPGA: Recv ZDACR 36904
17-03-17 21:37:59.588 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.588 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:37:59.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.738 -07 000000012 INF: FPGA: Recv ZSGSRD 35591
17-03-17 21:37:59.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:37:59.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.748 -07 000000382 INF: FPGA: Recv ZSGSRD 35581
17-03-17 21:37:59.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.758 -07 000000438 INF: FPGA: Recv ZSGSRD 35592
17-03-17 21:37:59.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.768 -07 000000476 INF: FPGA: Recv ZSGSRD 35591
17-03-17 21:37:59.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.778 -07 000000458 INF: FPGA: Recv ZSGSRD 35586
17-03-17 21:37:59.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.788 -07 000000480 INF: FPGA: Recv ZSGSRD 35585
17-03-17 21:37:59.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.798 -07 000000459 INF: FPGA: Recv ZSGSRD 35585
17-03-17 21:37:59.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.808 -07 000000608 INF: FPGA: Recv ZSGSRD 35585
17-03-17 21:37:59.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.818 -07 000000547 INF: FPGA: Recv ZSGSRD 35585
17-03-17 21:37:59.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:37:59.828 -07 000000627 INF: FPGA: Recv ZSGSRD 35584
17-03-17 21:37:59.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.838 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:37:59.838 -07 000000012 INF: FPGA: Recv ZPIEZORD 31573
17-03-17 21:37:59.848 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:37:59.848 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.631 V. Piezo Error = -8.9 V.
17-03-17 21:37:59.848 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35586 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35585 (-168.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35581 (-168.0 uncal um), Max = 35592 (-168.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:37:59.848 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35586, posNoise = 6, negNoise = 5
17-03-17 21:37:59.848 -07 000000610 INF: Z Motor: After move to -0.168936, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:37:59.848 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:37:59.848 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:37:59.848 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:37:59.848 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:37:59.848 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:37:59.848 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:37:59.848 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:37:59.848 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:37:59.848 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:37:59.848 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:37:59.848 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:37:59.848 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:37:59.848 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:37:59.858 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:37:59.858 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:37:59.858 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:37:59.858 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:37:59.858 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:37:59.858 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 21:37:59.868 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:37:59.868 -07 000000431 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:37:59.868 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 37080 150\n [Camera]
17-03-17 21:38:00.068 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-17 21:38:00.498 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:00.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:00.498 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:00.508 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:00.508 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:38:00.508 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:00.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:00.508 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:00.508 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:00.508 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:38:00.698 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37080 820
17-03-17 21:38:00.838 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:00.888 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:38:00.888 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:38:00.888 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:00.888 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:38:00.888 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:38:00.888 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:00.888 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:38:00.898 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:38:00.898 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:38:00.898 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:38:01.048 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:01.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:01.058 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:01.168 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:01.168 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:01.168 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:01.168 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:38:01.168 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:01.178 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:01.178 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 21:38:01.248 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:01.248 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:01.248 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 37080 150' command took 2 ms to send, 1371 ms to get response, and 1378 ms overall
17-03-17 21:38:01.248 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.169268
17-03-17 21:38:01.248 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16927 mm
17-03-17 21:38:01.248 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:01.248 -07 000000476 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 21:38:01.248 -07 000000476 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-17 21:38:01.248 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:01.248 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 36977, sync = True, waitForSettling = False)
17-03-17 21:38:01.248 -07 000000512 INF: Z Motor: Moving to -0.169270 mm, started at -0.168935 mm, distance = -0.33 um
17-03-17 21:38:01.248 -07 000000627 INF: FPGA: Recv YRDPOS 141369
17-03-17 21:38:01.258 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:01.258 -07 000000476 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:01.258 -07 000000512 INF: FPGA: Xmit ZDACW 36977\n [Z Motor]
17-03-17 21:38:01.258 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:38:01.258 -07 000000476 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:01.258 -07 000000476 INF: Y Motor: Moving 1352 steps-31
17-03-17 21:38:01.268 -07 000000512 INF: FPGA: 'ZDACW 36977' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:38:01.268 -07 000000476 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:01.278 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:01.278 -07 000000431 INF: FPGA: Recv ZDACR 36977
17-03-17 21:38:01.288 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:01.288 -07 000000512 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-17 21:38:01.548 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:38:01.548 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:38:01.548 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:01.548 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:38:01.548 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:38:01.548 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:01.548 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:01.558 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:01.558 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 501 ms.
17-03-17 21:38:01.558 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:38:01.638 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 21:38:01.638 -07 000000476 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-17 21:38:01.688 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:01.688 -07 000000382 INF: FPGA: Recv YRDPOS 143080
17-03-17 21:38:01.698 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:01.698 -07 000000476 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:01.698 -07 000000476 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 21:38:01.698 -07 000000476 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.201 mm/sec
17-03-17 21:38:01.768 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.037119,
17-03-17 21:38:01.898 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:01.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:02.648 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:02.648 -07 000000569 INF: FPGA: Recv YRDPOS 143081
17-03-17 21:38:02.658 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:02.658 -07 000000476 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:02.678 -07 000000476 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:02.678 -07 000000476 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:38:02.678 -07 000000476 INF: Y Motor: Moved to 69.8638 after 1430 ms (table move)
17-03-17 21:38:02.678 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169270 mm (DAC = 36977)
17-03-17 21:38:02.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.688 -07 000000480 INF: FPGA: Recv ZSGSRD 35644
17-03-17 21:38:02.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.698 -07 000000476 INF: FPGA: Recv ZSGSRD 35641
17-03-17 21:38:02.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.708 -07 000000501 INF: FPGA: Recv ZSGSRD 35642
17-03-17 21:38:02.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.718 -07 000000458 INF: FPGA: Recv ZSGSRD 35641
17-03-17 21:38:02.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.728 -07 000000415 INF: FPGA: Recv ZSGSRD 35633
17-03-17 21:38:02.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.738 -07 000000576 INF: FPGA: Recv ZSGSRD 35631
17-03-17 21:38:02.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.748 -07 000000415 INF: FPGA: Recv ZSGSRD 35642
17-03-17 21:38:02.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.758 -07 000000382 INF: FPGA: Recv ZSGSRD 35643
17-03-17 21:38:02.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.768 -07 000000476 INF: FPGA: Recv ZSGSRD 35634
17-03-17 21:38:02.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:02.778 -07 000000382 INF: FPGA: Recv ZSGSRD 35641
17-03-17 21:38:02.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.788 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:02.788 -07 000000476 INF: FPGA: Recv ZPIEZORD 31681
17-03-17 21:38:02.798 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.798 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.642 V. Piezo Error = -8.7 V.
17-03-17 21:38:02.798 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35639 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35641 (-168.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35631 (-168.4 uncal um), Max = 35644 (-168.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:38:02.798 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35639, posNoise = 5, negNoise = 8
17-03-17 21:38:02.798 -07 000000610 INF: Z Motor: After move to -0.169270, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:02.798 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 110 ms (allowed 150 ms), total time = 1543 ms
17-03-17 21:38:02.798 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:02.838 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-17 21:38:02.838 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:02.838 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.169275848531354. ----------
17-03-17 21:38:02.838 -07 000000610 INF: Cycle	53	Tile	13	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:02.838 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36800, sync = True, waitForSettling = True)
17-03-17 21:38:02.838 -07 000000610 INF: Z Motor: Moving to -0.168460 mm, started at -0.169276 mm, distance = 0.82 um
17-03-17 21:38:02.838 -07 000000610 INF: FPGA: Xmit ZDACW 36800\n [Z Motor]
17-03-17 21:38:02.848 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 21:38:02.848 -07 000000610 INF: FPGA: 'ZDACW 36800' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:38:02.848 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:02.848 -07 000000480 INF: FPGA: Recv ZDACR 36800
17-03-17 21:38:02.858 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:02.858 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:03.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.008 -07 000000438 INF: FPGA: Recv ZSGSRD 35518
17-03-17 21:38:03.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:03.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.018 -07 000000429 INF: FPGA: Recv ZSGSRD 35515
17-03-17 21:38:03.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.028 -07 000000424 INF: FPGA: Recv ZSGSRD 35508
17-03-17 21:38:03.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.038 -07 000000429 INF: FPGA: Recv ZSGSRD 35516
17-03-17 21:38:03.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.048 -07 000000512 INF: FPGA: Recv ZSGSRD 35510
17-03-17 21:38:03.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.058 -07 000000431 INF: FPGA: Recv ZSGSRD 35511
17-03-17 21:38:03.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.068 -07 000000382 INF: FPGA: Recv ZSGSRD 35510
17-03-17 21:38:03.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.078 -07 000000569 INF: FPGA: Recv ZSGSRD 35519
17-03-17 21:38:03.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.088 -07 000000415 INF: FPGA: Recv ZSGSRD 35517
17-03-17 21:38:03.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:03.098 -07 000000627 INF: FPGA: Recv ZSGSRD 35514
17-03-17 21:38:03.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.108 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:03.108 -07 000000608 INF: FPGA: Recv ZPIEZORD 31475
17-03-17 21:38:03.118 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:03.118 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.615 V. Piezo Error = -8.9 V.
17-03-17 21:38:03.118 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35514 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35514 (-167.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35508 (-167.6 uncal um), Max = 35519 (-167.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:03.118 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35514, posNoise = 5, negNoise = 6
17-03-17 21:38:03.118 -07 000000610 INF: Z Motor: After move to -0.168460, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:03.118 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms)
17-03-17 21:38:03.118 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:03.118 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:03.118 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:03.118 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:03.118 -07 000000459 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:03.118 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:03.118 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:03.118 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:03.118 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms.
17-03-17 21:38:03.118 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:03.118 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-17 21:38:03.118 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:03.128 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:38:03.128 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:03.128 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:03.128 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:03.138 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:38:03.138 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:38:03.138 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:38:03.138 -07 000000459 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 21:38:03.138 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36977 150\n [Camera]
17-03-17 21:38:03.338 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:03.768 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:03.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:03.768 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:03.768 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:03.768 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:38:03.778 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:03.778 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:03.778 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:03.778 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:03.778 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:38:03.968 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36977 821
17-03-17 21:38:04.118 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:04.158 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 21:38:04.158 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:38:04.158 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:04.158 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:38:04.158 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 21:38:04.158 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:04.158 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:04.158 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:38:04.158 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:04.168 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:38:04.328 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:04.328 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:04.328 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:04.328 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:04.328 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:38:04.328 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:04.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:04.328 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:04.328 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:04.328 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:38:04.518 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:38:04.518 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:04.518 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36977 150' command took 2 ms to send, 1372 ms to get response, and 1378 ms overall
17-03-17 21:38:04.518 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168905
17-03-17 21:38:04.518 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16891 mm
17-03-17 21:38:04.518 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:04.518 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 21:38:04.518 -07 000000576 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm
17-03-17 21:38:04.518 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:04.518 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 36897, sync = True, waitForSettling = False)
17-03-17 21:38:04.518 -07 000000547 INF: Z Motor: Moving to -0.168904 mm, started at -0.168473 mm, distance = -0.43 um
17-03-17 21:38:04.518 -07 000000459 INF: FPGA: Recv YRDPOS 143081
17-03-17 21:38:04.528 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:38:04.528 -07 000000576 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:04.528 -07 000000576 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:04.528 -07 000000576 INF: Y Motor: Moving 1342 steps-19
17-03-17 21:38:04.528 -07 000000547 INF: FPGA: Xmit ZDACW 36897\n [Z Motor]
17-03-17 21:38:04.528 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:38:04.538 -07 000000547 INF: FPGA: 'ZDACW 36897' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:38:04.538 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:04.538 -07 000000512 INF: FPGA: Recv ZDACR 36897
17-03-17 21:38:04.548 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:04.548 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:04.548 -07 000000547 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-17 21:38:04.708 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 21:38:04.708 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:38:04.708 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:04.708 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:38:04.708 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:38:04.708 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:04.718 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:04.718 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:38:04.718 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:04.728 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:38:04.918 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 21:38:04.918 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 261 ms to get response, and 397 ms overall
17-03-17 21:38:04.958 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:04.968 -07 000000626 INF: FPGA: Recv YRDPOS 144770
17-03-17 21:38:04.968 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 5 ms to get response, and 6 ms overall
17-03-17 21:38:04.968 -07 000000576 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:04.968 -07 000000576 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:38:04.968 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.108 mm/sec
17-03-17 21:38:05.918 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:05.918 -07 000000382 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:38:05.928 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:05.928 -07 000000576 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:05.948 -07 000000576 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:05.948 -07 000000576 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:38:05.948 -07 000000576 INF: Y Motor: Moved to 70.6890 after 1426 ms (table move)
17-03-17 21:38:05.948 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168904 mm (DAC = 36897)
17-03-17 21:38:05.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:05.948 -07 000000608 INF: FPGA: Recv ZSGSRD 35586
17-03-17 21:38:05.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:05.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:05.958 -07 000000501 INF: FPGA: Recv ZSGSRD 35585
17-03-17 21:38:05.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:05.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:05.968 -07 000000012 INF: FPGA: Recv ZSGSRD 35575
17-03-17 21:38:05.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:05.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:05.978 -07 000000429 INF: FPGA: Recv ZSGSRD 35584
17-03-17 21:38:05.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:05.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:05.988 -07 000000424 INF: FPGA: Recv ZSGSRD 35581
17-03-17 21:38:05.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:05.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:05.998 -07 000000458 INF: FPGA: Recv ZSGSRD 35584
17-03-17 21:38:06.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.008 -07 000000480 INF: FPGA: Recv ZSGSRD 35586
17-03-17 21:38:06.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.018 -07 000000576 INF: FPGA: Recv ZSGSRD 35576
17-03-17 21:38:06.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.028 -07 000000382 INF: FPGA: Recv ZSGSRD 35586
17-03-17 21:38:06.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.038 -07 000000501 INF: FPGA: Recv ZSGSRD 35584
17-03-17 21:38:06.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.048 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:06.048 -07 000000438 INF: FPGA: Recv ZPIEZORD 31576
17-03-17 21:38:06.058 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.058 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.630 V. Piezo Error = -8.8 V.
17-03-17 21:38:06.058 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35583 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35584 (-168.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35575 (-168.0 uncal um), Max = 35586 (-168.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:38:06.058 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35583, posNoise = 3, negNoise = 8
17-03-17 21:38:06.058 -07 000000610 INF: Z Motor: After move to -0.168904, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:06.058 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 104 ms (allowed 150 ms), total time = 1532 ms
17-03-17 21:38:06.058 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:06.108 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:38:06.108 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:06.108 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.168916092651415. ----------
17-03-17 21:38:06.108 -07 000000610 INF: Cycle	53	Tile	14	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:06.108 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36721, sync = True, waitForSettling = True)
17-03-17 21:38:06.108 -07 000000610 INF: Z Motor: Moving to -0.168098 mm, started at -0.168916 mm, distance = 0.82 um
17-03-17 21:38:06.108 -07 000000610 INF: FPGA: Xmit ZDACW 36721\n [Z Motor]
17-03-17 21:38:06.108 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:38:06.118 -07 000000610 INF: FPGA: 'ZDACW 36721' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:06.118 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:06.118 -07 000000512 INF: FPGA: Recv ZDACR 36721
17-03-17 21:38:06.128 -07 000000610 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.128 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:06.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.278 -07 000000431 INF: FPGA: Recv ZSGSRD 35457
17-03-17 21:38:06.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:06.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.288 -07 000000382 INF: FPGA: Recv ZSGSRD 35464
17-03-17 21:38:06.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.298 -07 000000438 INF: FPGA: Recv ZSGSRD 35458
17-03-17 21:38:06.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.308 -07 000000547 INF: FPGA: Recv ZSGSRD 35455
17-03-17 21:38:06.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.318 -07 000000576 INF: FPGA: Recv ZSGSRD 35459
17-03-17 21:38:06.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.328 -07 000000626 INF: FPGA: Recv ZSGSRD 35461
17-03-17 21:38:06.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.338 -07 000000476 INF: FPGA: Recv ZSGSRD 35457
17-03-17 21:38:06.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.348 -07 000000431 INF: FPGA: Recv ZSGSRD 35457
17-03-17 21:38:06.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.358 -07 000000480 INF: FPGA: Recv ZSGSRD 35462
17-03-17 21:38:06.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:06.368 -07 000000512 INF: FPGA: Recv ZSGSRD 35449
17-03-17 21:38:06.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.378 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:06.378 -07 000000459 INF: FPGA: Recv ZPIEZORD 31410
17-03-17 21:38:06.388 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:06.388 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.603 V. Piezo Error = -8.9 V.
17-03-17 21:38:06.388 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.1 um, Read 10 ADC samples: Avg = 35458 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35458 (-167.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35449 (-167.2 uncal um), Max = 35464 (-167.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:38:06.388 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35458, posNoise = 6, negNoise = 9
17-03-17 21:38:06.388 -07 000000610 INF: Z Motor: After move to -0.168098, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:06.388 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:38:06.388 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:06.388 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:06.388 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:06.388 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:06.388 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:06.388 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:06.388 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:06.388 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:06.388 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:06.388 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:06.388 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:38:06.388 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:06.388 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:06.388 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:06.398 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:38:06.398 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:06.408 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:38:06.408 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 21:38:06.408 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:38:06.408 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:38:06.408 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36897 150\n [Camera]
17-03-17 21:38:06.608 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:06.898 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:06.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:07.048 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:07.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:07.048 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:07.048 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:07.048 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:07.048 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:07.048 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:07.048 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 21:38:07.058 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:07.058 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-17 21:38:07.128 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.007176,
17-03-17 21:38:07.238 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36897 820
17-03-17 21:38:07.388 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:07.428 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:38:07.428 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-17 21:38:07.428 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:07.428 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 21:38:07.428 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 21:38:07.428 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:07.428 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:07.428 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:38:07.428 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:38:07.438 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:38:07.598 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:07.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:07.598 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:07.598 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:07.598 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:07.598 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:07.608 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:07.608 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:07.608 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:38:07.608 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:38:07.788 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:38:07.788 -07 000000415 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:07.788 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36897 150' command took 2 ms to send, 1367 ms to get response, and 1379 ms overall
17-03-17 21:38:07.788 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.168443
17-03-17 21:38:07.788 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16844 mm
17-03-17 21:38:07.788 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:07.798 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 36796, sync = True, waitForSettling = False)
17-03-17 21:38:07.798 -07 000000012 INF: Z Motor: Moving to -0.168441 mm, started at -0.168113 mm, distance = -0.33 um
17-03-17 21:38:07.798 -07 000000012 INF: FPGA: Xmit ZDACW 36796\n [Z Motor]
17-03-17 21:38:07.798 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 21:38:07.798 -07 000000429 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm
17-03-17 21:38:07.798 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:38:07.808 -07 000000012 INF: FPGA: 'ZDACW 36796' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:38:07.808 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:07.808 -07 000000459 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:38:07.818 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:38:07.818 -07 000000429 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:07.818 -07 000000429 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:07.818 -07 000000429 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:38:07.818 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:07.818 -07 000000547 INF: FPGA: Recv ZDACR 36796
17-03-17 21:38:07.828 -07 000000012 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:07.828 -07 000000012 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-17 21:38:07.828 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:07.998 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:38:07.998 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:38:07.998 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:07.998 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:38:07.998 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:38:07.998 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:07.998 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:07.998 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:07.998 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:38:08.008 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:38:08.198 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-17 21:38:08.198 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:38:08.238 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:08.248 -07 000000569 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:38:08.248 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:38:08.248 -07 000000429 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:08.248 -07 000000429 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:38:08.248 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-17 21:38:09.198 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:09.198 -07 000000431 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:38:09.208 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:09.208 -07 000000429 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:09.228 -07 000000429 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:09.228 -07 000000429 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:09.228 -07 000000429 INF: Y Motor: Moved to 71.5190 after 1430 ms (table move)
17-03-17 21:38:09.228 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168441 mm (DAC = 36796)
17-03-17 21:38:09.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.238 -07 000000438 INF: FPGA: Recv ZSGSRD 35516
17-03-17 21:38:09.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:38:09.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.238 -07 000000476 INF: FPGA: Recv ZSGSRD 35508
17-03-17 21:38:09.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.248 -07 000000627 INF: FPGA: Recv ZSGSRD 35511
17-03-17 21:38:09.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.258 -07 000000431 INF: FPGA: Recv ZSGSRD 35514
17-03-17 21:38:09.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.268 -07 000000626 INF: FPGA: Recv ZSGSRD 35507
17-03-17 21:38:09.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.278 -07 000000569 INF: FPGA: Recv ZSGSRD 35508
17-03-17 21:38:09.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.288 -07 000000458 INF: FPGA: Recv ZSGSRD 35509
17-03-17 21:38:09.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.298 -07 000000608 INF: FPGA: Recv ZSGSRD 35509
17-03-17 21:38:09.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.308 -07 000000382 INF: FPGA: Recv ZSGSRD 35510
17-03-17 21:38:09.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.318 -07 000000626 INF: FPGA: Recv ZSGSRD 35509
17-03-17 21:38:09.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.328 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:09.328 -07 000000459 INF: FPGA: Recv ZPIEZORD 31534
17-03-17 21:38:09.338 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.338 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.615 V. Piezo Error = -8.8 V.
17-03-17 21:38:09.338 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.4 um, Read 10 ADC samples: Avg = 35510 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35509 (-167.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35507 (-167.6 uncal um), Max = 35516 (-167.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:38:09.338 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35510, posNoise = 6, negNoise = 3
17-03-17 21:38:09.338 -07 000000610 INF: Z Motor: After move to -0.168441, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:09.338 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 103 ms (allowed 150 ms), total time = 1538 ms
17-03-17 21:38:09.338 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:09.388 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-17 21:38:09.388 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:09.388 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.168447125165067. ----------
17-03-17 21:38:09.388 -07 000000610 INF: Cycle	53	Tile	15	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:09.388 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36620, sync = True, waitForSettling = True)
17-03-17 21:38:09.388 -07 000000610 INF: Z Motor: Moving to -0.167636 mm, started at -0.168447 mm, distance = 0.81 um
17-03-17 21:38:09.388 -07 000000610 INF: FPGA: Xmit ZDACW 36620\n [Z Motor]
17-03-17 21:38:09.388 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:38:09.398 -07 000000610 INF: FPGA: 'ZDACW 36620' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:09.398 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:09.398 -07 000000480 INF: FPGA: Recv ZDACR 36620
17-03-17 21:38:09.408 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.408 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:09.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.558 -07 000000512 INF: FPGA: Recv ZSGSRD 35385
17-03-17 21:38:09.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:09.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.568 -07 000000608 INF: FPGA: Recv ZSGSRD 35379
17-03-17 21:38:09.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.578 -07 000000438 INF: FPGA: Recv ZSGSRD 35386
17-03-17 21:38:09.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.588 -07 000000382 INF: FPGA: Recv ZSGSRD 35388
17-03-17 21:38:09.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.598 -07 000000626 INF: FPGA: Recv ZSGSRD 35389
17-03-17 21:38:09.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.608 -07 000000476 INF: FPGA: Recv ZSGSRD 35379
17-03-17 21:38:09.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.618 -07 000000547 INF: FPGA: Recv ZSGSRD 35386
17-03-17 21:38:09.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.628 -07 000000012 INF: FPGA: Recv ZSGSRD 35387
17-03-17 21:38:09.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.638 -07 000000424 INF: FPGA: Recv ZSGSRD 35385
17-03-17 21:38:09.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:09.648 -07 000000480 INF: FPGA: Recv ZSGSRD 35386
17-03-17 21:38:09.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.658 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:09.658 -07 000000512 INF: FPGA: Recv ZPIEZORD 31386
17-03-17 21:38:09.668 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:09.668 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.588 V. Piezo Error = -8.8 V.
17-03-17 21:38:09.668 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35385 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35386 (-166.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35379 (-166.7 uncal um), Max = 35389 (-166.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:09.668 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35385, posNoise = 4, negNoise = 6
17-03-17 21:38:09.668 -07 000000610 INF: Z Motor: After move to -0.167636, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:09.668 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:38:09.668 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:09.668 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:09.668 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:09.668 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:09.668 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:09.668 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:09.668 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:09.668 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:09.668 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:09.668 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:09.668 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:09.668 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:09.668 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:38:09.668 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:09.678 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:09.678 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:09.678 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 21:38:09.678 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:38:09.688 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:38:09.688 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 21:38:09.688 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36796 150\n [Camera]
17-03-17 21:38:09.888 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:10.318 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:10.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:10.328 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:10.328 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:10.328 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:38:10.328 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:10.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:10.328 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:10.328 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:10.328 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 21:38:10.518 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36796 820
17-03-17 21:38:10.668 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 971
17-03-17 21:38:10.718 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 21:38:10.718 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:38:10.718 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:10.718 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 391 ms.
17-03-17 21:38:10.718 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:38:10.718 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:10.718 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:10.718 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:10.718 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:38:10.728 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:38:10.878 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:10.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:10.878 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:10.878 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:10.878 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:38:10.878 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:10.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:10.878 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:10.878 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:10.878 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:38:11.068 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:11.068 -07 000000012 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:11.068 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36796 150' command took 2 ms to send, 1376 ms to get response, and 1381 ms overall
17-03-17 21:38:11.068 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:38:11.068 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.167644098647346. ------
17-03-17 21:38:11.078 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:11.078 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17396 mm
17-03-17 21:38:11.078 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:11.078 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 38001, sync = True, waitForSettling = False)
17-03-17 21:38:11.078 -07 000000569 INF: Z Motor: Moving to -0.173957 mm, started at -0.167644 mm, distance = -6.31 um
17-03-17 21:38:11.078 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:11.078 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 21:38:11.078 -07 000000438 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-17 21:38:11.088 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:11.088 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:11.088 -07 000000382 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:38:11.098 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:38:11.098 -07 000000438 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:11.098 -07 000000438 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:11.098 -07 000000438 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:38:11.098 -07 000000476 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:38:11.108 -07 000000569 INF: FPGA: Xmit ZDACW 38001\n [Z Motor]
17-03-17 21:38:11.108 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 21:38:11.118 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:11.118 -07 000000569 INF: FPGA: 'ZDACW 38001' command took 0 ms to send, 0 ms to get response, and 33 ms overall
17-03-17 21:38:11.128 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:11.128 -07 000000501 INF: FPGA: Recv ZDACR 38001
17-03-17 21:38:11.138 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:11.138 -07 000000569 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-17 21:38:11.258 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:38:11.258 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:38:11.258 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:11.258 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:38:11.258 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:38:11.258 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:11.258 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:38:11.258 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:38:11.268 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:38:11.268 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:38:11.298 -07 000000382 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:38:11.298 -07 000000476 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-17 21:38:11.488 -07 000000459 INF: FPGA: Recv YMVTILE
17-03-17 21:38:11.488 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:38:11.528 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:11.538 -07 000000608 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:38:11.538 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:11.538 -07 000000438 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:11.538 -07 000000438 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:38:11.538 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-17 21:38:11.898 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:11.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:12.488 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:12.488 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.012614,
17-03-17 21:38:12.488 -07 000000415 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:38:12.498 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:12.498 -07 000000438 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:12.518 -07 000000438 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:12.518 -07 000000438 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:12.518 -07 000000438 INF: Y Motor: Moved to 72.3496 after 1439 ms (table move)
17-03-17 21:38:12.528 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173957 mm (DAC = 38001)
17-03-17 21:38:12.538 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.538 -07 000000501 INF: FPGA: Recv ZSGSRD 36370
17-03-17 21:38:12.548 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:12.548 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.548 -07 000000627 INF: FPGA: Recv ZSGSRD 36368
17-03-17 21:38:12.558 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.558 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.558 -07 000000382 INF: FPGA: Recv ZSGSRD 36370
17-03-17 21:38:12.568 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.568 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.568 -07 000000512 INF: FPGA: Recv ZSGSRD 36372
17-03-17 21:38:12.578 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.588 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.588 -07 000000458 INF: FPGA: Recv ZSGSRD 36367
17-03-17 21:38:12.598 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:12.598 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.598 -07 000000576 INF: FPGA: Recv ZSGSRD 36363
17-03-17 21:38:12.608 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.608 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.608 -07 000000480 INF: FPGA: Recv ZSGSRD 36370
17-03-17 21:38:12.618 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.618 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.618 -07 000000627 INF: FPGA: Recv ZSGSRD 36371
17-03-17 21:38:12.628 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.628 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.628 -07 000000608 INF: FPGA: Recv ZSGSRD 36369
17-03-17 21:38:12.638 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.638 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:12.638 -07 000000458 INF: FPGA: Recv ZSGSRD 36367
17-03-17 21:38:12.648 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.648 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:12.648 -07 000000576 INF: FPGA: Recv ZPIEZORD 32688
17-03-17 21:38:12.658 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:12.658 -07 000000626 INF: Z Motor: Piezo is near 49.8 V (nominally 0 to 100 V), expect near 58.0 V, since DAC is at 5.799 V. Piezo Error = -8.2 V.
17-03-17 21:38:12.658 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.0 um, Read 10 ADC samples: Avg = 36369 (-173.1 uncal um), Error = 0.9 uncal um, Median = 36370 (-173.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 36363 (-173.0 uncal um), Max = 36372 (-173.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:12.658 -07 000000626 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36369, posNoise = 3, negNoise = 6
17-03-17 21:38:12.658 -07 000000626 INF: Z Motor: After move to -0.173957, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:12.658 -07 000000626 INF: Z Motor: Settle wait time = 1443 ms, measure time = 131 ms (allowed 150 ms), total time = 1574 ms
17-03-17 21:38:12.658 -07 000000626 INF: Z Motor: Waiting extra 19 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:12.678 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-17 21:38:12.678 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:12.678 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:12.678 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:12.678 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:12.678 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:38:12.678 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:12.678 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:12.678 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:12.678 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:38:12.688 -07 000000458 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:12.688 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:38:12.698 -07 000000458 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 8 ms.
17-03-17 21:38:12.698 -07 000000458 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-17 21:38:12.698 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:38:12.738 -07 000000627 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:38:12.938 -07 000000547 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:38:12.938 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:38:12.938 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:38:12.948 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) start.
17-03-17 21:38:12.978 -07 000000626 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:38:12.978 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 21:38:12.978 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 21:38:13.058 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 21:38:13.058 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:13.058 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:38:13.058 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 21:38:13.078 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:13.078 -07 000000569 INF: Autofocus start
17-03-17 21:38:13.078 -07 000000569 INF: MeasureProfile start
17-03-17 21:38:13.078 -07 000000480 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:13.088 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:13.088 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:38:13.088 -07 000000569 INF: MeasureProfile done
17-03-17 21:38:13.088 -07 000000569 INF: X=0  Z correction [um]=-0.0713522
17-03-17 21:38:13.088 -07 000000569 INF: Autofocus finished
17-03-17 21:38:13.288 -07 000000576 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:38:13.288 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:38:13.288 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.173965523394839. ----------
17-03-17 21:38:13.288 -07 000000610 INF: Cycle	53	Tile	16	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:13.298 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36498, sync = True, waitForSettling = True)
17-03-17 21:38:13.298 -07 000000610 INF: Z Motor: Moving to -0.167077 mm, started at -0.173966 mm, distance = 6.89 um
17-03-17 21:38:13.298 -07 000000610 INF: FPGA: Xmit ZDACW 36498\n [Z Motor]
17-03-17 21:38:13.298 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:38:13.308 -07 000000610 INF: FPGA: 'ZDACW 36498' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:38:13.308 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:13.308 -07 000000480 INF: FPGA: Recv ZDACR 36498
17-03-17 21:38:13.318 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.318 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:13.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.468 -07 000000415 INF: FPGA: Recv ZSGSRD 35299
17-03-17 21:38:13.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:13.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.478 -07 000000012 INF: FPGA: Recv ZSGSRD 35298
17-03-17 21:38:13.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.488 -07 000000475 INF: FPGA: Recv ZSGSRD 35299
17-03-17 21:38:13.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.498 -07 000000382 INF: FPGA: Recv ZSGSRD 35299
17-03-17 21:38:13.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.508 -07 000000608 INF: FPGA: Recv ZSGSRD 35295
17-03-17 21:38:13.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.518 -07 000000576 INF: FPGA: Recv ZSGSRD 35304
17-03-17 21:38:13.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.528 -07 000000512 INF: FPGA: Recv ZSGSRD 35298
17-03-17 21:38:13.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.538 -07 000000547 INF: FPGA: Recv ZSGSRD 35298
17-03-17 21:38:13.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.548 -07 000000431 INF: FPGA: Recv ZSGSRD 35302
17-03-17 21:38:13.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:13.558 -07 000000458 INF: FPGA: Recv ZSGSRD 35293
17-03-17 21:38:13.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.568 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:13.568 -07 000000576 INF: FPGA: Recv ZPIEZORD 31239
17-03-17 21:38:13.578 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:13.578 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -9.0 V.
17-03-17 21:38:13.578 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35298 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35298 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35293 (-166.2 uncal um), Max = 35304 (-166.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:38:13.578 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35298, posNoise = 6, negNoise = 5
17-03-17 21:38:13.578 -07 000000610 INF: Z Motor: After move to -0.167077, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:13.578 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:38:13.578 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:13.578 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:13.578 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:13.578 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:13.578 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:13.578 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:13.578 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:13.578 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:13.578 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:13.578 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:13.578 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:13.578 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:13.588 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:13.588 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:13.588 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:13.588 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:13.598 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:38:13.598 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:13.598 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:38:13.598 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:38:13.608 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36674 150\n [Camera]
17-03-17 21:38:13.808 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:14.238 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:14.238 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:14.238 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:14.238 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:14.238 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:38:14.238 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:14.238 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:14.248 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:14.248 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:14.248 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:38:14.428 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36674 820
17-03-17 21:38:14.578 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:14.618 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:38:14.618 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:38:14.618 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:14.618 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:38:14.618 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:38:14.618 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:14.618 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:14.618 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:38:14.628 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:14.628 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:38:14.788 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:14.788 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:14.788 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:14.788 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:14.788 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-17 21:38:14.798 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:14.798 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:14.798 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:14.798 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:14.798 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-17 21:38:14.978 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:38:14.988 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:14.988 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36674 150' command took 2 ms to send, 1369 ms to get response, and 1378 ms overall
17-03-17 21:38:14.988 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167577
17-03-17 21:38:14.988 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16758 mm
17-03-17 21:38:14.988 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:14.988 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 21:38:14.988 -07 000000608 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-17 21:38:14.988 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 36607, sync = True, waitForSettling = False)
17-03-17 21:38:14.988 -07 000000501 INF: Z Motor: Moving to -0.167576 mm, started at -0.167085 mm, distance = -0.49 um
17-03-17 21:38:14.988 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:14.988 -07 000000626 INF: FPGA: Recv YRDPOS 148173
17-03-17 21:38:14.998 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:14.998 -07 000000501 INF: FPGA: Xmit ZDACW 36607\n [Z Motor]
17-03-17 21:38:14.998 -07 000000608 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:15.128 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:38:15.128 -07 000000501 INF: FPGA: 'ZDACW 36607' command took 0 ms to send, 0 ms to get response, and 135 ms overall
17-03-17 21:38:15.128 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:15.128 -07 000000459 INF: FPGA: Recv ZDACR 36607
17-03-17 21:38:15.128 -07 000000608 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:15.128 -07 000000608 INF: Y Motor: Moving 1348 steps-27
17-03-17 21:38:15.138 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:15.138 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:15.138 -07 000000501 INF: Z Motor: MoveAbsStepped took 145 ms (did NOT wait for settling yet))
17-03-17 21:38:15.188 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 392 ms.
17-03-17 21:38:15.188 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:38:15.188 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:15.188 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 397 ms.
17-03-17 21:38:15.188 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:38:15.188 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:15.188 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:15.198 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 21:38:15.198 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-17 21:38:15.198 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:38:15.508 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:38:15.508 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-17 21:38:15.548 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:15.558 -07 000000569 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:38:15.558 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:15.558 -07 000000608 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:15.558 -07 000000608 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 21:38:15.558 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.843 mm, average velocity = 2.207 mm/sec
17-03-17 21:38:16.508 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:16.508 -07 000000480 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:38:16.518 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:16.518 -07 000000608 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:16.538 -07 000000608 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:16.538 -07 000000608 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:16.538 -07 000000608 INF: Y Motor: Moved to 73.1763 after 1551 ms (table move)
17-03-17 21:38:16.538 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167576 mm (DAC = 36607)
17-03-17 21:38:16.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.548 -07 000000438 INF: FPGA: Recv ZSGSRD 35375
17-03-17 21:38:16.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:38:16.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.548 -07 000000576 INF: FPGA: Recv ZSGSRD 35377
17-03-17 21:38:16.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:16.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.558 -07 000000382 INF: FPGA: Recv ZSGSRD 35379
17-03-17 21:38:16.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.568 -07 000000480 INF: FPGA: Recv ZSGSRD 35369
17-03-17 21:38:16.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.578 -07 000000547 INF: FPGA: Recv ZSGSRD 35378
17-03-17 21:38:16.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.588 -07 000000626 INF: FPGA: Recv ZSGSRD 35386
17-03-17 21:38:16.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.598 -07 000000475 INF: FPGA: Recv ZSGSRD 35372
17-03-17 21:38:16.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.608 -07 000000459 INF: FPGA: Recv ZSGSRD 35375
17-03-17 21:38:16.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.618 -07 000000576 INF: FPGA: Recv ZSGSRD 35371
17-03-17 21:38:16.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.628 -07 000000459 INF: FPGA: Recv ZSGSRD 35374
17-03-17 21:38:16.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.638 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:16.638 -07 000000415 INF: FPGA: Recv ZPIEZORD 31366
17-03-17 21:38:16.648 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.648 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.586 V. Piezo Error = -8.9 V.
17-03-17 21:38:16.648 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35376 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35375 (-166.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35369 (-166.7 uncal um), Max = 35386 (-166.8 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:38:16.648 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35376, posNoise = 10, negNoise = 7
17-03-17 21:38:16.648 -07 000000610 INF: Z Motor: After move to -0.167576, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:16.648 -07 000000610 INF: Z Motor: Settle wait time = 1553 ms, measure time = 103 ms (allowed 150 ms), total time = 1656 ms
17-03-17 21:38:16.648 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:16.698 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1707 ms
17-03-17 21:38:16.698 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:16.698 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.167586280738071. ----------
17-03-17 21:38:16.698 -07 000000610 INF: Cycle	53	Tile	17	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:16.698 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36430, sync = True, waitForSettling = True)
17-03-17 21:38:16.698 -07 000000610 INF: Z Motor: Moving to -0.166766 mm, started at -0.167586 mm, distance = 0.82 um
17-03-17 21:38:16.698 -07 000000610 INF: FPGA: Xmit ZDACW 36430\n [Z Motor]
17-03-17 21:38:16.698 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:38:16.708 -07 000000610 INF: FPGA: 'ZDACW 36430' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:16.708 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:16.708 -07 000000627 INF: FPGA: Recv ZDACR 36430
17-03-17 21:38:16.718 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.718 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:16.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.868 -07 000000512 INF: FPGA: Recv ZSGSRD 35247
17-03-17 21:38:16.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.878 -07 000000458 INF: FPGA: Recv ZSGSRD 35252
17-03-17 21:38:16.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.888 -07 000000415 INF: FPGA: Recv ZSGSRD 35255
17-03-17 21:38:16.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.898 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:16.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:16.898 -07 000000626 INF: FPGA: Recv ZSGSRD 35252
17-03-17 21:38:16.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.908 -07 000000576 INF: FPGA: Recv ZSGSRD 35252
17-03-17 21:38:16.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.918 -07 000000382 INF: FPGA: Recv ZSGSRD 35248
17-03-17 21:38:16.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.928 -07 000000415 INF: FPGA: Recv ZSGSRD 35248
17-03-17 21:38:16.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.938 -07 000000459 INF: FPGA: Recv ZSGSRD 35252
17-03-17 21:38:16.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.948 -07 000000458 INF: FPGA: Recv ZSGSRD 35247
17-03-17 21:38:16.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:16.958 -07 000000608 INF: FPGA: Recv ZSGSRD 35250
17-03-17 21:38:16.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.968 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:16.968 -07 000000476 INF: FPGA: Recv ZPIEZORD 31208
17-03-17 21:38:16.978 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:16.978 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.559 V. Piezo Error = -8.9 V.
17-03-17 21:38:16.978 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35250 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35251 (-165.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35247 (-165.9 uncal um), Max = 35255 (-165.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:38:16.978 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35250, posNoise = 5, negNoise = 3
17-03-17 21:38:16.978 -07 000000610 INF: Z Motor: After move to -0.166766, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:16.978 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:38:16.978 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:16.978 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:16.978 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:16.978 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:16.978 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:16.978 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:16.978 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:16.978 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:16.978 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:16.978 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:16.978 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:16.978 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:16.988 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:16.988 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:16.988 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:16.988 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:16.998 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:38:16.998 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:38:16.998 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:38:16.998 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:38:16.998 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36607 150\n [Camera]
17-03-17 21:38:17.198 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:17.628 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:17.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:17.628 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:17.638 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:17.638 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:17.638 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:17.638 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:17.638 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:38:17.638 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:17.648 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:38:17.828 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36607 820
17-03-17 21:38:17.858 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.009895,
17-03-17 21:38:17.978 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:18.018 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:38:18.018 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:38:18.018 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:18.018 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:18.018 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:38:18.018 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:38:18.018 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:18.028 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:18.028 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:38:18.028 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:38:18.188 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:18.188 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:18.188 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:18.188 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:18.188 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:18.188 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:18.188 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:18.188 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:38:18.188 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:18.188 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:38:18.378 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:18.378 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:18.378 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36607 150' command took 2 ms to send, 1372 ms to get response, and 1379 ms overall
17-03-17 21:38:18.378 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.167126
17-03-17 21:38:18.378 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16713 mm
17-03-17 21:38:18.378 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:18.388 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36509, sync = True, waitForSettling = False)
17-03-17 21:38:18.388 -07 000000480 INF: Z Motor: Moving to -0.167127 mm, started at -0.166777 mm, distance = -0.35 um
17-03-17 21:38:18.388 -07 000000480 INF: FPGA: Xmit ZDACW 36509\n [Z Motor]
17-03-17 21:38:18.388 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 21:38:18.388 -07 000000608 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-17 21:38:18.388 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:38:18.398 -07 000000480 INF: FPGA: 'ZDACW 36509' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:18.398 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:18.398 -07 000000501 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:38:18.408 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:38:18.408 -07 000000608 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:18.408 -07 000000608 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:18.408 -07 000000608 INF: Y Motor: Moving 1354 steps-33
17-03-17 21:38:18.408 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:18.408 -07 000000547 INF: FPGA: Recv ZDACR 36509
17-03-17 21:38:18.418 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:18.418 -07 000000480 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-17 21:38:18.418 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:18.568 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:38:18.568 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:38:18.568 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:18.568 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:38:18.568 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:38:18.568 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:18.578 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:18.578 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:18.578 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:38:18.578 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:38:18.788 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 21:38:18.788 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:38:18.828 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:18.828 -07 000000476 INF: FPGA: Recv YRDPOS 151568
17-03-17 21:38:18.838 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:18.838 -07 000000608 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:18.838 -07 000000608 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 21:38:18.838 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.846 mm, average velocity = 2.181 mm/sec
17-03-17 21:38:19.788 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:19.788 -07 000000382 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:38:19.798 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.798 -07 000000608 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:19.808 -07 000000608 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:19.808 -07 000000608 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:38:19.808 -07 000000608 INF: Y Motor: Moved to 74.0083 after 1422 ms (table move)
17-03-17 21:38:19.818 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167127 mm (DAC = 36509)
17-03-17 21:38:19.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.818 -07 000000424 INF: FPGA: Recv ZSGSRD 35305
17-03-17 21:38:19.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.828 -07 000000475 INF: FPGA: Recv ZSGSRD 35305
17-03-17 21:38:19.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.838 -07 000000415 INF: FPGA: Recv ZSGSRD 35308
17-03-17 21:38:19.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.848 -07 000000569 INF: FPGA: Recv ZSGSRD 35312
17-03-17 21:38:19.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.858 -07 000000512 INF: FPGA: Recv ZSGSRD 35309
17-03-17 21:38:19.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.868 -07 000000382 INF: FPGA: Recv ZSGSRD 35308
17-03-17 21:38:19.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.878 -07 000000459 INF: FPGA: Recv ZSGSRD 35302
17-03-17 21:38:19.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.888 -07 000000547 INF: FPGA: Recv ZSGSRD 35306
17-03-17 21:38:19.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.898 -07 000000576 INF: FPGA: Recv ZSGSRD 35304
17-03-17 21:38:19.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:19.908 -07 000000608 INF: FPGA: Recv ZSGSRD 35307
17-03-17 21:38:19.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.918 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:19.918 -07 000000476 INF: FPGA: Recv ZPIEZORD 31298
17-03-17 21:38:19.928 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.928 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.571 V. Piezo Error = -8.8 V.
17-03-17 21:38:19.928 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35307 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35306 (-166.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35302 (-166.2 uncal um), Max = 35312 (-166.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:38:19.928 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35307, posNoise = 5, negNoise = 5
17-03-17 21:38:19.928 -07 000000610 INF: Z Motor: After move to -0.167127, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:19.928 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 110 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:38:19.928 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:19.968 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms
17-03-17 21:38:19.968 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:19.968 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.167143010100289. ----------
17-03-17 21:38:19.968 -07 000000610 INF: Cycle	53	Tile	18	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:19.968 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36332, sync = True, waitForSettling = True)
17-03-17 21:38:19.968 -07 000000610 INF: Z Motor: Moving to -0.166317 mm, started at -0.167143 mm, distance = 0.83 um
17-03-17 21:38:19.968 -07 000000610 INF: FPGA: Xmit ZDACW 36332\n [Z Motor]
17-03-17 21:38:19.968 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:38:19.978 -07 000000610 INF: FPGA: 'ZDACW 36332' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:19.978 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:19.978 -07 000000480 INF: FPGA: Recv ZDACR 36332
17-03-17 21:38:19.988 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:19.988 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:20.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.138 -07 000000476 INF: FPGA: Recv ZSGSRD 35184
17-03-17 21:38:20.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:20.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.148 -07 000000475 INF: FPGA: Recv ZSGSRD 35178
17-03-17 21:38:20.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.158 -07 000000012 INF: FPGA: Recv ZSGSRD 35183
17-03-17 21:38:20.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.168 -07 000000501 INF: FPGA: Recv ZSGSRD 35185
17-03-17 21:38:20.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.178 -07 000000608 INF: FPGA: Recv ZSGSRD 35180
17-03-17 21:38:20.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.188 -07 000000476 INF: FPGA: Recv ZSGSRD 35181
17-03-17 21:38:20.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.198 -07 000000438 INF: FPGA: Recv ZSGSRD 35174
17-03-17 21:38:20.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.208 -07 000000458 INF: FPGA: Recv ZSGSRD 35184
17-03-17 21:38:20.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.218 -07 000000627 INF: FPGA: Recv ZSGSRD 35177
17-03-17 21:38:20.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:20.228 -07 000000415 INF: FPGA: Recv ZSGSRD 35176
17-03-17 21:38:20.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.238 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:20.238 -07 000000431 INF: FPGA: Recv ZPIEZORD 31085
17-03-17 21:38:20.248 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:20.248 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.544 V. Piezo Error = -9.0 V.
17-03-17 21:38:20.248 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35180 (-165.5 uncal um), Error = 0.9 uncal um, Median = 35180 (-165.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35174 (-165.4 uncal um), Max = 35185 (-165.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:20.248 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35180, posNoise = 5, negNoise = 6
17-03-17 21:38:20.248 -07 000000610 INF: Z Motor: After move to -0.166317, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:20.248 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:38:20.248 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:20.248 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:20.248 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:20.248 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:20.248 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:20.248 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:20.248 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:20.248 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:20.248 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:20.248 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:20.248 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:20.248 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:20.258 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:20.258 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:20.258 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:20.258 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:20.268 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:38:20.268 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:20.268 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:38:20.268 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:38:20.278 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36509 150\n [Camera]
17-03-17 21:38:20.478 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:20.908 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:20.908 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:20.908 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:20.908 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:20.908 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:38:20.908 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:20.908 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:20.908 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:21.038 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:21.038 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:38:21.098 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36509 820
17-03-17 21:38:21.248 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:21.288 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:38:21.288 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:38:21.288 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:21.298 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:21.298 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:38:21.408 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 368 ms.
17-03-17 21:38:21.408 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-17 21:38:21.408 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:21.408 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:38:21.418 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 505 ms.
17-03-17 21:38:21.458 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:21.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:21.458 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:21.468 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:21.468 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:21.468 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:21.468 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:21.468 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:38:21.468 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:21.468 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:38:21.648 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:38:21.648 -07 000000627 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:21.648 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36509 150' command took 2 ms to send, 1369 ms to get response, and 1378 ms overall
17-03-17 21:38:21.658 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.166779
17-03-17 21:38:21.658 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16678 mm
17-03-17 21:38:21.658 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:21.658 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 21:38:21.658 -07 000000576 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-17 21:38:21.658 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:21.658 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 36433, sync = True, waitForSettling = False)
17-03-17 21:38:21.658 -07 000000429 INF: Z Motor: Moving to -0.166780 mm, started at -0.166327 mm, distance = -0.45 um
17-03-17 21:38:21.658 -07 000000626 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:38:21.668 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:21.668 -07 000000576 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:21.668 -07 000000576 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:21.668 -07 000000576 INF: Y Motor: Moving 1351 steps-30
17-03-17 21:38:21.668 -07 000000429 INF: FPGA: Xmit ZDACW 36433\n [Z Motor]
17-03-17 21:38:21.668 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:38:21.678 -07 000000429 INF: FPGA: 'ZDACW 36433' command took 3 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:38:21.678 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:21.678 -07 000000458 INF: FPGA: Recv ZDACR 36433
17-03-17 21:38:21.688 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:21.688 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:21.688 -07 000000429 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:38:21.848 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:38:21.848 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:38:21.848 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:21.848 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:38:21.848 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:38:21.848 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:21.848 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:21.848 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:38:21.848 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:21.858 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:38:21.898 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:21.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:22.058 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:38:22.058 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 21:38:22.088 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:22.088 -07 000000512 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:38:22.098 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:22.098 -07 000000576 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:22.098 -07 000000576 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-17 21:38:22.098 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.127 mm/sec
17-03-17 21:38:23.048 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:23.048 -07 000000475 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:38:23.058 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:23.058 -07 000000576 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:23.068 -07 000000576 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:23.068 -07 000000576 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:23.068 -07 000000576 INF: Y Motor: Moved to 74.8320 after 1412 ms (table move)
17-03-17 21:38:23.068 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166780 mm (DAC = 36433)
17-03-17 21:38:23.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.078 -07 000000501 INF: FPGA: Recv ZSGSRD 35250
17-03-17 21:38:23.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:38:23.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.078 -07 000000547 INF: FPGA: Recv ZSGSRD 35257
17-03-17 21:38:23.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:38:23.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.088 -07 000000627 INF: FPGA: Recv ZSGSRD 35246
17-03-17 21:38:23.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.098 -07 000000012 INF: FPGA: Recv ZSGSRD 35249
17-03-17 21:38:23.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.108 -07 000000512 INF: FPGA: Recv ZSGSRD 35248
17-03-17 21:38:23.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.118 -07 000000475 INF: FPGA: Recv ZSGSRD 35257
17-03-17 21:38:23.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.128 -07 000000459 INF: FPGA: Recv ZSGSRD 35261
17-03-17 21:38:23.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.138 -07 000000480 INF: FPGA: Recv ZSGSRD 35255
17-03-17 21:38:23.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.148 -07 000000429 INF: FPGA: Recv ZSGSRD 35257
17-03-17 21:38:23.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.158 -07 000000382 INF: FPGA: Recv ZSGSRD 35255
17-03-17 21:38:23.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:23.168 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:23.168 -07 000000438 INF: FPGA: Recv ZPIEZORD 31196
17-03-17 21:38:23.178 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.178 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.559 V. Piezo Error = -9.0 V.
17-03-17 21:38:23.178 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35254 (-165.9 uncal um), Error = 0.8 uncal um, Median = 35255 (-165.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35246 (-165.9 uncal um), Max = 35261 (-166.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:38:23.178 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35254, posNoise = 7, negNoise = 8
17-03-17 21:38:23.178 -07 000000610 INF: Z Motor: After move to -0.166780, error = -0.000023, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:23.178 -07 000000610 INF: Z Motor: Settle wait time = 1413 ms, measure time = 102 ms (allowed 150 ms), total time = 1515 ms
17-03-17 21:38:23.178 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:23.218 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.012614,
17-03-17 21:38:23.228 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1567 ms
17-03-17 21:38:23.228 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:23.228 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.166802526856776. ----------
17-03-17 21:38:23.228 -07 000000610 INF: Cycle	53	Tile	19	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:23.228 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36256, sync = True, waitForSettling = True)
17-03-17 21:38:23.228 -07 000000610 INF: Z Motor: Moving to -0.165969 mm, started at -0.166803 mm, distance = 0.83 um
17-03-17 21:38:23.248 -07 000000610 INF: FPGA: Xmit ZDACW 36256\n [Z Motor]
17-03-17 21:38:23.248 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:38:23.258 -07 000000610 INF: FPGA: 'ZDACW 36256' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-17 21:38:23.258 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:23.258 -07 000000458 INF: FPGA: Recv ZDACR 36256
17-03-17 21:38:23.268 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.268 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:23.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.418 -07 000000547 INF: FPGA: Recv ZSGSRD 35120
17-03-17 21:38:23.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:23.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.428 -07 000000608 INF: FPGA: Recv ZSGSRD 35127
17-03-17 21:38:23.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.438 -07 000000627 INF: FPGA: Recv ZSGSRD 35126
17-03-17 21:38:23.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.448 -07 000000608 INF: FPGA: Recv ZSGSRD 35130
17-03-17 21:38:23.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.458 -07 000000431 INF: FPGA: Recv ZSGSRD 35125
17-03-17 21:38:23.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.468 -07 000000459 INF: FPGA: Recv ZSGSRD 35122
17-03-17 21:38:23.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.478 -07 000000458 INF: FPGA: Recv ZSGSRD 35121
17-03-17 21:38:23.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.488 -07 000000459 INF: FPGA: Recv ZSGSRD 35129
17-03-17 21:38:23.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.498 -07 000000415 INF: FPGA: Recv ZSGSRD 35128
17-03-17 21:38:23.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:23.508 -07 000000458 INF: FPGA: Recv ZSGSRD 35126
17-03-17 21:38:23.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:23.518 -07 000000547 INF: FPGA: Recv ZPIEZORD 31050
17-03-17 21:38:23.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:23.528 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.532 V. Piezo Error = -9.0 V.
17-03-17 21:38:23.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.0 um, Read 10 ADC samples: Avg = 35125 (-165.1 uncal um), Error = 0.9 uncal um, Median = 35126 (-165.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35120 (-165.1 uncal um), Max = 35130 (-165.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:38:23.528 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35125, posNoise = 5, negNoise = 5
17-03-17 21:38:23.528 -07 000000610 INF: Z Motor: After move to -0.165969, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:23.528 -07 000000610 INF: Z Motor: MoveAbsStepped took 296 ms)
17-03-17 21:38:23.528 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:23.528 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:23.528 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:23.528 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:23.528 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:23.528 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:23.528 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:23.528 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:23.528 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:23.528 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:23.528 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:23.528 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:23.528 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:23.528 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:23.538 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:23.538 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:23.538 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:38:23.538 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:38:23.548 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 21:38:23.548 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:38:23.548 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 36433 150\n [Camera]
17-03-17 21:38:23.748 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:24.178 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:24.178 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:24.188 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:24.188 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:24.188 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:38:24.188 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:24.188 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:24.188 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:24.188 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:24.188 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:38:24.378 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36433 820
17-03-17 21:38:24.528 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:24.568 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 21:38:24.568 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:38:24.568 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:24.578 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 21:38:24.578 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:38:24.578 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:24.578 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:24.578 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:38:24.578 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:24.588 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 21:38:24.738 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:24.738 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:24.738 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:24.738 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:24.738 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:38:24.738 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:24.738 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:24.738 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:24.868 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:24.868 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:38:24.928 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:38:24.928 -07 000000415 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:24.928 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 36433 150' command took 2 ms to send, 1373 ms to get response, and 1378 ms overall
17-03-17 21:38:25.118 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:38:25.118 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:38:25.118 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:25.128 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:25.128 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:38:25.128 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 21:38:25.168 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-17 21:38:25.238 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:38:25.238 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:38:25.238 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:25.248 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:25.248 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 513 ms.
17-03-17 21:38:25.248 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 21:38:25.298 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-17 21:38:25.298 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-17 21:38:25.298 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 21:38:25.298 -07 000000480 INF: FPGA: Recv EMCUR 
17-03-17 21:38:25.308 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:25.308 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-17 21:38:25.808 -07 000000626 INF: FPGA: Recv EMIN
17-03-17 21:38:25.808 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 21:38:25.808 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-17 21:38:25.808 -07 000000475 INF: FPGA: Recv EMCUR 
17-03-17 21:38:25.818 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:25.818 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:38:25.818 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83203125, Z-Position -0.165973803490489. ------
17-03-17 21:38:25.818 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:25.818 -07 000000012 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.14039 mm
17-03-17 21:38:25.818 -07 000000012 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:25.828 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:25.828 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:25.828 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 30669, sync = True, waitForSettling = False)
17-03-17 21:38:25.828 -07 000000576 INF: Z Motor: Moving to -0.140394 mm, started at -0.165974 mm, distance = 25.58 um
17-03-17 21:38:25.828 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:38:25.828 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 21:38:25.828 -07 000000626 INF: Y Motor: Moving to 59.9126 mm, started at 74.8320 mm, delta = -14.9194 mm
17-03-17 21:38:25.838 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:25.838 -07 000000608 INF: FPGA: Recv YRDPOS 153257
17-03-17 21:38:25.848 -07 000000576 INF: FPGA: Xmit ZDACW 30669\n [Z Motor]
17-03-17 21:38:25.848 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 21:38:25.848 -07 000000626 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:25.848 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 21:38:25.848 -07 000000626 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-17 21:38:25.848 -07 000000626 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 21:38:25.858 -07 000000626 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 21:38:25.858 -07 000000576 INF: FPGA: 'ZDACW 30669' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:38:25.868 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:25.868 -07 000000382 INF: FPGA: Recv ZDACR 30669
17-03-17 21:38:25.878 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:25.878 -07 000000576 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 21:38:26.028 -07 000000480 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:38:26.028 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-17 21:38:26.898 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:26.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:27.478 -07 000000438 INF: FPGA: Recv YMVTO 122703 23903
17-03-17 21:38:27.478 -07 000000626 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1634 ms overall
17-03-17 21:38:27.478 -07 000000626 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 21:38:27.478 -07 000000626 INF: Y Motor: To move from 74.833 to 59.913 (-14.919 mm) should take 23872 steps, but required 23903 steps (14.939 mm). Slippage = 0.019 mm (0.00%).
17-03-17 21:38:27.478 -07 000000626 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1634 ms, distance = 14.919 mm, average velocity = 9.131 mm/sec
17-03-17 21:38:28.598 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.005817,
17-03-17 21:38:30.328 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:30.328 -07 000000431 INF: FPGA: Recv YRDPOS 122699
17-03-17 21:38:30.338 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.338 -07 000000626 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:30.378 -07 000000626 INF: Y Motor: After move to 59.912609, error = -0.000988, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:30.378 -07 000000626 INF: Y Motor: Position error after settling = -2 encoder counts (-0.001 mm), Delta during settling = -4 counts (-0.002 mm)
17-03-17 21:38:30.378 -07 000000626 INF: Y Motor: Moved to 59.9116 after 4551 ms
17-03-17 21:38:30.388 -07 000000012 INF: Z Motor: EndOfMoveAbsStepped: target = -0.140394 mm (DAC = 30669)
17-03-17 21:38:30.388 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.388 -07 000000547 INF: FPGA: Recv ZSGSRD 31145
17-03-17 21:38:30.398 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.398 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.398 -07 000000576 INF: FPGA: Recv ZSGSRD 31147
17-03-17 21:38:30.408 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.408 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.408 -07 000000475 INF: FPGA: Recv ZSGSRD 31145
17-03-17 21:38:30.418 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.418 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.418 -07 000000438 INF: FPGA: Recv ZSGSRD 31137
17-03-17 21:38:30.428 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.428 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.428 -07 000000429 INF: FPGA: Recv ZSGSRD 31144
17-03-17 21:38:30.438 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.438 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.438 -07 000000458 INF: FPGA: Recv ZSGSRD 31143
17-03-17 21:38:30.448 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.448 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.448 -07 000000512 INF: FPGA: Recv ZSGSRD 31141
17-03-17 21:38:30.458 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.458 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.458 -07 000000459 INF: FPGA: Recv ZSGSRD 31147
17-03-17 21:38:30.468 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.468 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.468 -07 000000438 INF: FPGA: Recv ZSGSRD 31136
17-03-17 21:38:30.478 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.478 -07 000000012 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:30.478 -07 000000480 INF: FPGA: Recv ZSGSRD 31152
17-03-17 21:38:30.488 -07 000000012 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.488 -07 000000012 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:30.488 -07 000000608 INF: FPGA: Recv ZPIEZORD 26856
17-03-17 21:38:30.498 -07 000000012 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:30.498 -07 000000012 INF: Z Motor: Piezo is near 37.4 V (nominally 0 to 100 V), expect near 46.8 V, since DAC is at 4.680 V. Piezo Error = -9.4 V.
17-03-17 21:38:30.498 -07 000000012 INF: Z Motor: ReadAdcAverage: Commanded Z = -140.4 um, Read 10 ADC samples: Avg = 31144 (-139.6 uncal um), Error = 0.8 uncal um, Median = 31144 (-139.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 31136 (-139.5 uncal um), Max = 31152 (-139.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:38:30.498 -07 000000012 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31144, posNoise = 8, negNoise = 8
17-03-17 21:38:30.498 -07 000000012 INF: Z Motor: After move to -0.140394, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:30.498 -07 000000012 INF: Z Motor: Settle wait time = 4559 ms, measure time = 110 ms (allowed 150 ms), total time = 4669 ms
17-03-17 21:38:30.498 -07 000000012 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:30.538 -07 000000012 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4712 ms
17-03-17 21:38:30.538 -07 000000012 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:30.538 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:30.538 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:30.538 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:30.538 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:30.538 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:38:30.538 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:30.538 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:30.538 -07 000000512 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 21:38:30.558 -07 000000512 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 19 ms.
17-03-17 21:38:30.558 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:38:30.568 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:30.568 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:38:30.568 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 21:38:30.568 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 30 ms.
17-03-17 21:38:30.578 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:38:30.618 -07 000000480 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:38:30.818 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:38:30.818 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:38:30.818 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:38:30.818 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) start.
17-03-17 21:38:30.858 -07 000000458 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:38:30.858 -07 000000382 INF: FPGA: Recv CAMSNAP
17-03-17 21:38:30.858 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 276 ms to get response, and 284 ms overall
17-03-17 21:38:30.938 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 21:38:30.938 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:30.938 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:38:30.938 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 21:38:30.958 -07 000000626 INF: Image SNR check: start
17-03-17 21:38:30.958 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:30.958 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:30.968 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:30.968 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:38:30.968 -07 000000626 INF: Image SNR check: pass  [peak (Max-Min)=57.98]
17-03-17 21:38:30.968 -07 000000626 INF: Autofocus start
17-03-17 21:38:30.968 -07 000000626 INF: MeasureProfile start
17-03-17 21:38:30.988 -07 000000626 INF: MeasureProfile done
17-03-17 21:38:30.988 -07 000000626 INF: X=12  Z correction [um]=0.03377635
17-03-17 21:38:30.988 -07 000000626 INF: Autofocus finished
17-03-17 21:38:31.168 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:38:31.168 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:38:31.168 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91162109375, Z-position -0.140399014954138. ----------
17-03-17 21:38:31.168 -07 000000610 INF: Cycle	53	Tile	1	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:31.178 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29189, sync = True, waitForSettling = True)
17-03-17 21:38:31.178 -07 000000610 INF: Z Motor: Moving to -0.133619 mm, started at -0.140399 mm, distance = 6.78 um
17-03-17 21:38:31.178 -07 000000610 INF: FPGA: Xmit ZDACW 29189\n [Z Motor]
17-03-17 21:38:31.178 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:38:31.188 -07 000000610 INF: FPGA: 'ZDACW 29189' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:31.188 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:31.188 -07 000000512 INF: FPGA: Recv ZDACR 29189
17-03-17 21:38:31.198 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.198 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:31.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.348 -07 000000424 INF: FPGA: Recv ZSGSRD 30088
17-03-17 21:38:31.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:31.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.358 -07 000000576 INF: FPGA: Recv ZSGSRD 30093
17-03-17 21:38:31.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.368 -07 000000627 INF: FPGA: Recv ZSGSRD 30094
17-03-17 21:38:31.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.378 -07 000000626 INF: FPGA: Recv ZSGSRD 30084
17-03-17 21:38:31.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.388 -07 000000415 INF: FPGA: Recv ZSGSRD 30090
17-03-17 21:38:31.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.398 -07 000000459 INF: FPGA: Recv ZSGSRD 30091
17-03-17 21:38:31.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.408 -07 000000476 INF: FPGA: Recv ZSGSRD 30091
17-03-17 21:38:31.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.418 -07 000000627 INF: FPGA: Recv ZSGSRD 30089
17-03-17 21:38:31.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.428 -07 000000438 INF: FPGA: Recv ZSGSRD 30090
17-03-17 21:38:31.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:31.438 -07 000000431 INF: FPGA: Recv ZSGSRD 30091
17-03-17 21:38:31.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.448 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:31.448 -07 000000459 INF: FPGA: Recv ZPIEZORD 25687
17-03-17 21:38:31.458 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:31.458 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.454 V. Piezo Error = -9.7 V.
17-03-17 21:38:31.458 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.6 um, Read 10 ADC samples: Avg = 30090 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30090 (-132.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30084 (-132.8 uncal um), Max = 30094 (-132.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:31.458 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30090, posNoise = 4, negNoise = 6
17-03-17 21:38:31.458 -07 000000610 INF: Z Motor: After move to -0.133619, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:31.458 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 21:38:31.458 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:31.458 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:31.458 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:31.458 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:31.458 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:31.458 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:31.458 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:31.458 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:31.458 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:31.458 -07 000000475 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 21:38:31.458 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:31.458 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:31.468 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:31.468 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:31.478 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:38:31.478 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:38:31.478 -07 000000475 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-17 21:38:31.478 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:31.488 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:38:31.488 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:31.498 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 21:38:31.498 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 37 ms.
17-03-17 21:38:31.498 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 29365 150\n [Camera]
17-03-17 21:38:31.698 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:31.898 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:32.138 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:32.138 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:32.138 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:32.138 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:32.138 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:32.138 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:32.138 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:32.138 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:38:32.148 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:32.148 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:38:32.328 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29365 820
17-03-17 21:38:32.478 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:32.518 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:38:32.518 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:38:32.518 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:32.518 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:38:32.518 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:38:32.518 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:32.528 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:32.528 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:38:32.528 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:32.528 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:38:32.688 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:32.688 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:32.688 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:32.688 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:32.688 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:32.688 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:38:32.688 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:32.688 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:32.688 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:32.688 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:38:32.878 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:32.878 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:32.878 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 29365 150' command took 2 ms to send, 1375 ms to get response, and 1378 ms overall
17-03-17 21:38:32.878 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.134110
17-03-17 21:38:32.878 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13411 mm
17-03-17 21:38:32.878 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:32.998 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 29296, sync = True, waitForSettling = False)
17-03-17 21:38:32.998 -07 000000458 INF: Z Motor: Moving to -0.134108 mm, started at -0.133628 mm, distance = -0.48 um
17-03-17 21:38:32.998 -07 000000458 INF: FPGA: Xmit ZDACW 29296\n [Z Motor]
17-03-17 21:38:32.998 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 21:38:32.998 -07 000000626 INF: Y Motor: Moving to 60.7426 mm, started at 59.9116 mm, delta = 0.8310 mm
17-03-17 21:38:32.998 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:38:33.008 -07 000000458 INF: FPGA: 'ZDACW 29296' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:33.008 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:33.008 -07 000000429 INF: FPGA: Recv ZDACR 29296
17-03-17 21:38:33.018 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:33.018 -07 000000458 INF: Z Motor: MoveAbsStepped took 14 ms (did NOT wait for settling yet))
17-03-17 21:38:33.018 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:33.018 -07 000000547 INF: FPGA: Recv YRDPOS 122699
17-03-17 21:38:33.028 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 21:38:33.028 -07 000000626 INF: Y Motor: Encoder = 122699 = motor step 95858.6 = 59.9116 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:33.028 -07 000000626 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:33.028 -07 000000626 INF: Y Motor: Moving 1330 steps2
17-03-17 21:38:33.028 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:33.078 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 21:38:33.078 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:38:33.078 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:33.078 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:38:33.078 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:38:33.078 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:33.078 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:33.078 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:33.078 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:38:33.088 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:38:33.398 -07 000000415 INF: FPGA: Recv YMVTILE
17-03-17 21:38:33.398 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-17 21:38:33.438 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:33.438 -07 000000429 INF: FPGA: Recv YRDPOS 124383
17-03-17 21:38:33.448 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:33.448 -07 000000626 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:33.448 -07 000000626 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 21:38:33.448 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.831 mm, average velocity = 2.198 mm/sec
17-03-17 21:38:33.958 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.99219,
17-03-17 21:38:34.398 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:34.398 -07 000000438 INF: FPGA: Recv YRDPOS 124383
17-03-17 21:38:34.408 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:34.408 -07 000000626 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:34.428 -07 000000626 INF: Y Motor: After move to 60.742607, error = -0.008720, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:34.428 -07 000000626 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:34.428 -07 000000626 INF: Y Motor: Moved to 60.7339 after 1427 ms (table move)
17-03-17 21:38:34.428 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134108 mm (DAC = 29296)
17-03-17 21:38:34.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.428 -07 000000608 INF: FPGA: Recv ZSGSRD 30160
17-03-17 21:38:34.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:34.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.438 -07 000000438 INF: FPGA: Recv ZSGSRD 30169
17-03-17 21:38:34.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.448 -07 000000475 INF: FPGA: Recv ZSGSRD 30171
17-03-17 21:38:34.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.458 -07 000000501 INF: FPGA: Recv ZSGSRD 30166
17-03-17 21:38:34.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.468 -07 000000012 INF: FPGA: Recv ZSGSRD 30171
17-03-17 21:38:34.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.478 -07 000000415 INF: FPGA: Recv ZSGSRD 30166
17-03-17 21:38:34.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.488 -07 000000476 INF: FPGA: Recv ZSGSRD 30164
17-03-17 21:38:34.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.498 -07 000000627 INF: FPGA: Recv ZSGSRD 30159
17-03-17 21:38:34.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.508 -07 000000382 INF: FPGA: Recv ZSGSRD 30162
17-03-17 21:38:34.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.518 -07 000000458 INF: FPGA: Recv ZSGSRD 30173
17-03-17 21:38:34.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.528 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:34.528 -07 000000569 INF: FPGA: Recv ZPIEZORD 25877
17-03-17 21:38:34.538 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.538 -07 000000610 INF: Z Motor: Piezo is near 35.3 V (nominally 0 to 100 V), expect near 44.7 V, since DAC is at 4.470 V. Piezo Error = -9.4 V.
17-03-17 21:38:34.538 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.1 um, Read 10 ADC samples: Avg = 30166 (-133.3 uncal um), Error = 0.8 uncal um, Median = 30166 (-133.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30159 (-133.3 uncal um), Max = 30173 (-133.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:38:34.538 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30166, posNoise = 7, negNoise = 7
17-03-17 21:38:34.538 -07 000000610 INF: Z Motor: After move to -0.134108, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:34.538 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 104 ms (allowed 150 ms), total time = 1534 ms
17-03-17 21:38:34.538 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:34.588 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1702 ms
17-03-17 21:38:34.588 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:34.588 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73388671875, Z-position -0.134116135479496. ----------
17-03-17 21:38:34.588 -07 000000610 INF: Cycle	53	Tile	2	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:34.588 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29120, sync = True, waitForSettling = True)
17-03-17 21:38:34.588 -07 000000610 INF: Z Motor: Moving to -0.133303 mm, started at -0.134116 mm, distance = 0.81 um
17-03-17 21:38:34.588 -07 000000610 INF: FPGA: Xmit ZDACW 29120\n [Z Motor]
17-03-17 21:38:34.588 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:38:34.598 -07 000000610 INF: FPGA: 'ZDACW 29120' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:34.598 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:34.598 -07 000000475 INF: FPGA: Recv ZDACR 29120
17-03-17 21:38:34.608 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.608 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:34.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.758 -07 000000501 INF: FPGA: Recv ZSGSRD 30047
17-03-17 21:38:34.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:34.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.768 -07 000000480 INF: FPGA: Recv ZSGSRD 30045
17-03-17 21:38:34.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.778 -07 000000476 INF: FPGA: Recv ZSGSRD 30044
17-03-17 21:38:34.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.788 -07 000000012 INF: FPGA: Recv ZSGSRD 30036
17-03-17 21:38:34.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.798 -07 000000415 INF: FPGA: Recv ZSGSRD 30041
17-03-17 21:38:34.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.808 -07 000000547 INF: FPGA: Recv ZSGSRD 30039
17-03-17 21:38:34.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.818 -07 000000438 INF: FPGA: Recv ZSGSRD 30041
17-03-17 21:38:34.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.828 -07 000000476 INF: FPGA: Recv ZSGSRD 30042
17-03-17 21:38:34.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.838 -07 000000512 INF: FPGA: Recv ZSGSRD 30045
17-03-17 21:38:34.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:34.848 -07 000000429 INF: FPGA: Recv ZSGSRD 30043
17-03-17 21:38:34.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.858 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:34.858 -07 000000424 INF: FPGA: Recv ZPIEZORD 25693
17-03-17 21:38:34.868 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:34.868 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.443 V. Piezo Error = -9.5 V.
17-03-17 21:38:34.868 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.3 um, Read 10 ADC samples: Avg = 30042 (-132.5 uncal um), Error = 0.8 uncal um, Median = 30042 (-132.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30036 (-132.5 uncal um), Max = 30047 (-132.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:34.868 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30042, posNoise = 5, negNoise = 6
17-03-17 21:38:34.868 -07 000000610 INF: Z Motor: After move to -0.133303, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:34.868 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:38:34.868 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:34.868 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:34.868 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:34.868 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:34.868 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:34.868 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:34.868 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:34.868 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:34.868 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:38:34.868 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:34.868 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:34.868 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:34.868 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:34.868 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:34.878 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:34.878 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:34.888 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:38:34.888 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:38:34.888 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:38:34.888 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:38:34.888 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 29296 150\n [Camera]
17-03-17 21:38:35.088 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:35.528 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:35.528 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:35.528 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:35.528 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:35.528 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:35.528 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:35.528 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:35.528 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:38:35.538 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:35.538 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:38:35.718 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29296 820
17-03-17 21:38:35.868 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:35.928 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 393 ms.
17-03-17 21:38:35.928 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:38:35.928 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:35.928 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 394 ms.
17-03-17 21:38:35.928 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:38:35.928 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:35.928 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:35.928 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-17 21:38:35.928 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:35.938 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-17 21:38:36.078 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1180
17-03-17 21:38:36.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1180
17-03-17 21:38:36.078 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:36.078 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1180
17-03-17 21:38:36.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1180
17-03-17 21:38:36.078 -07 000000459 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:36.078 -07 000000459 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:36.078 -07 000000459 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:38:36.088 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:36.088 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:38:36.268 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:36.268 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:36.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 29296 150' command took 2 ms to send, 1368 ms to get response, and 1381 ms overall
17-03-17 21:38:36.278 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133708
17-03-17 21:38:36.278 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13371 mm
17-03-17 21:38:36.278 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:36.278 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29209, sync = True, waitForSettling = False)
17-03-17 21:38:36.278 -07 000000626 INF: Z Motor: Moving to -0.133710 mm, started at -0.133320 mm, distance = -0.39 um
17-03-17 21:38:36.278 -07 000000626 INF: FPGA: Xmit ZDACW 29209\n [Z Motor]
17-03-17 21:38:36.278 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 21:38:36.278 -07 000000576 INF: Y Motor: Moving to 61.5726 mm, started at 60.7339 mm, delta = 0.8387 mm
17-03-17 21:38:36.278 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:38:36.288 -07 000000626 INF: FPGA: 'ZDACW 29209' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:36.288 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:36.288 -07 000000415 INF: FPGA: Recv ZDACR 29209
17-03-17 21:38:36.298 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:36.298 -07 000000626 INF: Z Motor: MoveAbsStepped took 15 ms (did NOT wait for settling yet))
17-03-17 21:38:36.298 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:36.298 -07 000000627 INF: FPGA: Recv YRDPOS 124383
17-03-17 21:38:36.308 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 21:38:36.308 -07 000000576 INF: Y Motor: Encoder = 124383 = motor step 97174.2 = 60.7339 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:36.308 -07 000000576 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:36.308 -07 000000576 INF: Y Motor: Moving 1342 steps-18
17-03-17 21:38:36.308 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:36.488 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 398 ms.
17-03-17 21:38:36.488 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:38:36.488 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:36.488 -07 000000459 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 402 ms.
17-03-17 21:38:36.488 -07 000000459 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:38:36.488 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:36.488 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:36.488 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 412 ms.
17-03-17 21:38:36.488 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:38:36.498 -07 000000459 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms.
17-03-17 21:38:36.678 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-17 21:38:36.678 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-17 21:38:36.718 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:36.718 -07 000000608 INF: FPGA: Recv YRDPOS 126084
17-03-17 21:38:36.728 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:36.728 -07 000000576 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:36.728 -07 000000576 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:38:36.728 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.839 mm, average velocity = 2.219 mm/sec
17-03-17 21:38:36.898 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:37.678 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:37.678 -07 000000480 INF: FPGA: Recv YRDPOS 126084
17-03-17 21:38:37.688 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:37.688 -07 000000576 INF: Y Motor: Encoder = 126084 = motor step 98503.1 = 61.5645 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:37.708 -07 000000576 INF: Y Motor: After move to 61.572609, error = -0.008156, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:37.708 -07 000000576 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:37.708 -07 000000576 INF: Y Motor: Moved to 61.5645 after 1427 ms (table move)
17-03-17 21:38:37.708 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133710 mm (DAC = 29209)
17-03-17 21:38:37.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.708 -07 000000626 INF: FPGA: Recv ZSGSRD 30099
17-03-17 21:38:37.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:37.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.718 -07 000000512 INF: FPGA: Recv ZSGSRD 30106
17-03-17 21:38:37.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.728 -07 000000569 INF: FPGA: Recv ZSGSRD 30104
17-03-17 21:38:37.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.738 -07 000000480 INF: FPGA: Recv ZSGSRD 30101
17-03-17 21:38:37.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.748 -07 000000475 INF: FPGA: Recv ZSGSRD 30118
17-03-17 21:38:37.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.758 -07 000000012 INF: FPGA: Recv ZSGSRD 30101
17-03-17 21:38:37.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.768 -07 000000382 INF: FPGA: Recv ZSGSRD 30100
17-03-17 21:38:37.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.778 -07 000000626 INF: FPGA: Recv ZSGSRD 30103
17-03-17 21:38:37.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.788 -07 000000458 INF: FPGA: Recv ZSGSRD 30103
17-03-17 21:38:37.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:37.798 -07 000000569 INF: FPGA: Recv ZSGSRD 30107
17-03-17 21:38:37.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.808 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:37.808 -07 000000429 INF: FPGA: Recv ZPIEZORD 25858
17-03-17 21:38:37.818 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:37.818 -07 000000610 INF: Z Motor: Piezo is near 35.2 V (nominally 0 to 100 V), expect near 44.6 V, since DAC is at 4.457 V. Piezo Error = -9.3 V.
17-03-17 21:38:37.818 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.7 um, Read 10 ADC samples: Avg = 30104 (-132.9 uncal um), Error = 0.8 uncal um, Median = 30103 (-132.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30099 (-132.9 uncal um), Max = 30118 (-133.0 uncal um), Pos Noise = 14 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:38:37.818 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30104, posNoise = 14, negNoise = 5
17-03-17 21:38:37.818 -07 000000610 INF: Z Motor: After move to -0.133710, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:37.818 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 106 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:38:37.818 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:37.868 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-17 21:38:37.868 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:37.868 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.564453125, Z-position -0.133717834326707. ----------
17-03-17 21:38:37.868 -07 000000610 INF: Cycle	53	Tile	3	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:37.868 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29032, sync = True, waitForSettling = True)
17-03-17 21:38:37.868 -07 000000610 INF: Z Motor: Moving to -0.132900 mm, started at -0.133718 mm, distance = 0.82 um
17-03-17 21:38:37.868 -07 000000610 INF: FPGA: Xmit ZDACW 29032\n [Z Motor]
17-03-17 21:38:37.878 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:38:37.878 -07 000000610 INF: FPGA: 'ZDACW 29032' command took 0 ms to send, 3 ms to get response, and 8 ms overall
17-03-17 21:38:37.878 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:37.878 -07 000000424 INF: FPGA: Recv ZDACR 29032
17-03-17 21:38:37.888 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:37.888 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:38.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.038 -07 000000431 INF: FPGA: Recv ZSGSRD 29980
17-03-17 21:38:38.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:38.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.048 -07 000000547 INF: FPGA: Recv ZSGSRD 29979
17-03-17 21:38:38.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.058 -07 000000012 INF: FPGA: Recv ZSGSRD 29985
17-03-17 21:38:38.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.068 -07 000000512 INF: FPGA: Recv ZSGSRD 29979
17-03-17 21:38:38.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.078 -07 000000547 INF: FPGA: Recv ZSGSRD 29980
17-03-17 21:38:38.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.088 -07 000000627 INF: FPGA: Recv ZSGSRD 29976
17-03-17 21:38:38.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.098 -07 000000476 INF: FPGA: Recv ZSGSRD 29972
17-03-17 21:38:38.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.108 -07 000000415 INF: FPGA: Recv ZSGSRD 29984
17-03-17 21:38:38.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.118 -07 000000438 INF: FPGA: Recv ZSGSRD 29978
17-03-17 21:38:38.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:38.128 -07 000000576 INF: FPGA: Recv ZSGSRD 29980
17-03-17 21:38:38.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.138 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:38.138 -07 000000459 INF: FPGA: Recv ZPIEZORD 25693
17-03-17 21:38:38.148 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:38.148 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.430 V. Piezo Error = -9.4 V.
17-03-17 21:38:38.148 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.9 um, Read 10 ADC samples: Avg = 29979 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29980 (-132.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29972 (-132.1 uncal um), Max = 29985 (-132.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:38:38.148 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29979, posNoise = 6, negNoise = 7
17-03-17 21:38:38.148 -07 000000610 INF: Z Motor: After move to -0.132900, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:38.148 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:38:38.148 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:38.148 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:38.148 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:38.148 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:38.148 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:38.148 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:38.148 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:38.148 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:38.148 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:38.148 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:38.148 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:38.148 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:38.148 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:38.148 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:38.158 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:38:38.158 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:38.168 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:38:38.168 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:38:38.168 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:38:38.168 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:38.168 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 29209 150\n [Camera]
17-03-17 21:38:38.378 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-17 21:38:38.808 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:38.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:38.808 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:38.808 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:38.808 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:38:38.808 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:38.808 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:38.808 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:38.808 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:38.808 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:38:39.008 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29209 820
17-03-17 21:38:39.148 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:39.188 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:38:39.188 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:38:39.188 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:39.188 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:38:39.188 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:38:39.188 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:39.188 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:38:39.188 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:38:39.188 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:38:39.198 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:38:39.318 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.964938,
17-03-17 21:38:39.358 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:39.358 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:39.358 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:39.358 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:39.358 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:38:39.358 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:39.358 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:39.368 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:39.368 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:39.368 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:38:39.548 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:39.548 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:39.548 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 29209 150' command took 2 ms to send, 1368 ms to get response, and 1378 ms overall
17-03-17 21:38:39.558 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:38:39.558 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.564453125, Z-Position -0.132914807808987. ------
17-03-17 21:38:39.558 -07 000000415 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13935 mm
17-03-17 21:38:39.558 -07 000000415 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:39.558 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:39.558 -07 000000476 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 21:38:39.558 -07 000000476 INF: Y Motor: Moving to 62.4026 mm, started at 61.5645 mm, delta = 0.8382 mm
17-03-17 21:38:39.558 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 30440, sync = True, waitForSettling = False)
17-03-17 21:38:39.558 -07 000000576 INF: Z Motor: Moving to -0.139345 mm, started at -0.132915 mm, distance = -6.43 um
17-03-17 21:38:39.558 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:39.568 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:39.568 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:39.568 -07 000000459 INF: FPGA: Recv YRDPOS 126085
17-03-17 21:38:39.578 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:38:39.578 -07 000000476 INF: Y Motor: Encoder = 126085 = motor step 98503.9 = 61.5649 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:39.578 -07 000000576 INF: FPGA: Xmit ZDACW 30440\n [Z Motor]
17-03-17 21:38:39.578 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:38:39.578 -07 000000476 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:39.578 -07 000000476 INF: Y Motor: Moving 1340 steps-17
17-03-17 21:38:39.588 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:38:39.588 -07 000000576 INF: FPGA: 'ZDACW 30440' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 21:38:39.598 -07 000000476 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:39.608 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:39.608 -07 000000569 INF: FPGA: Recv ZDACR 30440
17-03-17 21:38:39.618 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:38:39.618 -07 000000576 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet))
17-03-17 21:38:39.748 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:38:39.748 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:38:39.748 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:39.748 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:38:39.748 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 21:38:39.748 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:39.748 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:39.748 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:38:39.748 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:39.758 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:38:39.788 -07 000000576 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:38:39.788 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 21:38:39.978 -07 000000547 INF: FPGA: Recv YMVTILE
17-03-17 21:38:39.978 -07 000000476 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 393 ms overall
17-03-17 21:38:40.008 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:40.018 -07 000000512 INF: FPGA: Recv YRDPOS 127787
17-03-17 21:38:40.018 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:38:40.018 -07 000000476 INF: Y Motor: Encoder = 127787 = motor step 99833.6 = 62.3960 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:40.018 -07 000000476 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-17 21:38:40.018 -07 000000476 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 393 ms, distance = 0.838 mm, average velocity = 2.133 mm/sec
17-03-17 21:38:40.968 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:40.968 -07 000000458 INF: FPGA: Recv YRDPOS 127788
17-03-17 21:38:40.978 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:40.978 -07 000000476 INF: Y Motor: Encoder = 127788 = motor step 99834.4 = 62.3965 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:40.998 -07 000000476 INF: Y Motor: After move to 62.402607, error = -0.006123, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:40.998 -07 000000476 INF: Y Motor: Position error after settling (table move) = -13 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:38:40.998 -07 000000476 INF: Y Motor: Moved to 62.3965 after 1436 ms (table move)
17-03-17 21:38:40.998 -07 000000415 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139345 mm (DAC = 30440)
17-03-17 21:38:40.998 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:40.998 -07 000000459 INF: FPGA: Recv ZSGSRD 30977
17-03-17 21:38:41.008 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:41.008 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.008 -07 000000626 INF: FPGA: Recv ZSGSRD 30978
17-03-17 21:38:41.018 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.018 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.018 -07 000000012 INF: FPGA: Recv ZSGSRD 30985
17-03-17 21:38:41.028 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.028 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.028 -07 000000576 INF: FPGA: Recv ZSGSRD 30979
17-03-17 21:38:41.038 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.038 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.038 -07 000000475 INF: FPGA: Recv ZSGSRD 30987
17-03-17 21:38:41.048 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.048 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.048 -07 000000459 INF: FPGA: Recv ZSGSRD 30981
17-03-17 21:38:41.058 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.058 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.058 -07 000000438 INF: FPGA: Recv ZSGSRD 30979
17-03-17 21:38:41.068 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.068 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.068 -07 000000012 INF: FPGA: Recv ZSGSRD 30978
17-03-17 21:38:41.078 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.078 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.078 -07 000000626 INF: FPGA: Recv ZSGSRD 30980
17-03-17 21:38:41.088 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.088 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:41.088 -07 000000569 INF: FPGA: Recv ZSGSRD 30982
17-03-17 21:38:41.098 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.098 -07 000000415 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:41.098 -07 000000459 INF: FPGA: Recv ZPIEZORD 27014
17-03-17 21:38:41.108 -07 000000415 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.108 -07 000000415 INF: Z Motor: Piezo is near 37.7 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.645 V. Piezo Error = -8.7 V.
17-03-17 21:38:41.108 -07 000000415 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.3 um, Read 10 ADC samples: Avg = 30981 (-138.6 uncal um), Error = 0.8 uncal um, Median = 30980 (-138.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30977 (-138.5 uncal um), Max = 30987 (-138.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:38:41.108 -07 000000415 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30981, posNoise = 6, negNoise = 4
17-03-17 21:38:41.108 -07 000000415 INF: Z Motor: After move to -0.139345, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:41.108 -07 000000415 INF: Z Motor: Settle wait time = 1439 ms, measure time = 104 ms (allowed 150 ms), total time = 1543 ms
17-03-17 21:38:41.108 -07 000000415 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:41.158 -07 000000415 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-17 21:38:41.158 -07 000000415 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:41.158 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:41.158 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:41.158 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:41.168 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:41.168 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:38:41.168 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:41.168 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:38:41.168 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:38:41.168 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:41.168 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:38:41.178 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 21:38:41.178 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-17 21:38:41.178 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:38:41.218 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:38:41.418 -07 000000547 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:38:41.418 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:38:41.418 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:38:41.428 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) start.
17-03-17 21:38:41.458 -07 000000576 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:38:41.458 -07 000000382 INF: FPGA: Recv CAMSNAP
17-03-17 21:38:41.458 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 21:38:41.548 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:38:41.548 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:41.548 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:38:41.548 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:38:41.658 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:41.658 -07 000000501 INF: Autofocus start
17-03-17 21:38:41.658 -07 000000501 INF: MeasureProfile start
17-03-17 21:38:41.658 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:41.668 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:41.668 -07 000000012 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:38:41.668 -07 000000501 INF: MeasureProfile done
17-03-17 21:38:41.668 -07 000000501 INF: X=-32  Z correction [um]=-0.1591732
17-03-17 21:38:41.668 -07 000000501 INF: Autofocus finished
17-03-17 21:38:41.868 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:38:41.868 -07 000000012 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:38:41.868 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.396484375, Z-position -0.139351868375031. ----------
17-03-17 21:38:41.868 -07 000000610 INF: Cycle	53	Tile	4	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:41.878 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28918, sync = True, waitForSettling = True)
17-03-17 21:38:41.878 -07 000000610 INF: Z Motor: Moving to -0.132378 mm, started at -0.139352 mm, distance = 6.97 um
17-03-17 21:38:41.878 -07 000000610 INF: FPGA: Xmit ZDACW 28918\n [Z Motor]
17-03-17 21:38:41.878 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:38:41.888 -07 000000610 INF: FPGA: 'ZDACW 28918' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.888 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:41.888 -07 000000576 INF: FPGA: Recv ZDACR 28918
17-03-17 21:38:41.898 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:41.898 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:41.898 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:42.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.048 -07 000000569 INF: FPGA: Recv ZSGSRD 29897
17-03-17 21:38:42.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:42.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.058 -07 000000576 INF: FPGA: Recv ZSGSRD 29891
17-03-17 21:38:42.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.068 -07 000000429 INF: FPGA: Recv ZSGSRD 29899
17-03-17 21:38:42.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.078 -07 000000475 INF: FPGA: Recv ZSGSRD 29894
17-03-17 21:38:42.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.088 -07 000000382 INF: FPGA: Recv ZSGSRD 29897
17-03-17 21:38:42.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:42.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.098 -07 000000424 INF: FPGA: Recv ZSGSRD 29894
17-03-17 21:38:42.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.108 -07 000000626 INF: FPGA: Recv ZSGSRD 29896
17-03-17 21:38:42.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.118 -07 000000608 INF: FPGA: Recv ZSGSRD 29901
17-03-17 21:38:42.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.128 -07 000000459 INF: FPGA: Recv ZSGSRD 29891
17-03-17 21:38:42.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:42.138 -07 000000547 INF: FPGA: Recv ZSGSRD 29898
17-03-17 21:38:42.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.148 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:42.148 -07 000000501 INF: FPGA: Recv ZPIEZORD 25589
17-03-17 21:38:42.158 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:42.158 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.413 V. Piezo Error = -9.5 V.
17-03-17 21:38:42.158 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29896 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29896 (-131.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29891 (-131.6 uncal um), Max = 29901 (-131.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:38:42.158 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29896, posNoise = 5, negNoise = 5
17-03-17 21:38:42.158 -07 000000610 INF: Z Motor: After move to -0.132378, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:42.158 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 21:38:42.158 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:42.158 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:42.158 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:42.158 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:42.158 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:42.158 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:42.158 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:42.158 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:42.158 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:42.158 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:42.158 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:42.158 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:42.158 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:42.158 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:42.168 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:42.168 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:42.178 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 21:38:42.178 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:38:42.178 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:38:42.178 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:38:42.178 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 29095 150\n [Camera]
17-03-17 21:38:42.378 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:42.818 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:42.818 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:42.818 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:42.818 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:42.818 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:38:42.818 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:42.818 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:42.818 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:42.948 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:42.948 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:38:43.008 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29095 820
17-03-17 21:38:43.158 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:43.208 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:38:43.208 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:38:43.208 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:43.208 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:43.208 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:38:43.318 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 21:38:43.328 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 21:38:43.328 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:43.328 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:43.328 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-17 21:38:43.368 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:43.368 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:43.368 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:43.378 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:43.378 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:43.378 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:43.378 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:38:43.378 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:43.388 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:43.388 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:38:43.558 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:43.558 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:43.558 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 29095 150' command took 2 ms to send, 1368 ms to get response, and 1378 ms overall
17-03-17 21:38:43.558 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.133138
17-03-17 21:38:43.568 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13314 mm
17-03-17 21:38:43.568 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:43.568 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 21:38:43.568 -07 000000429 INF: Y Motor: Moving to 63.2326 mm, started at 62.3965 mm, delta = 0.8361 mm
17-03-17 21:38:43.568 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:43.568 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 29084, sync = True, waitForSettling = False)
17-03-17 21:38:43.568 -07 000000458 INF: Z Motor: Moving to -0.133138 mm, started at -0.132382 mm, distance = -0.76 um
17-03-17 21:38:43.568 -07 000000501 INF: FPGA: Recv YRDPOS 127788
17-03-17 21:38:43.578 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:43.578 -07 000000429 INF: Y Motor: Encoder = 127788 = motor step 99834.4 = 62.3965 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:43.578 -07 000000429 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:43.578 -07 000000429 INF: Y Motor: Moving 1338 steps-14
17-03-17 21:38:43.578 -07 000000458 INF: FPGA: Xmit ZDACW 29084\n [Z Motor]
17-03-17 21:38:43.578 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:38:43.588 -07 000000458 INF: FPGA: 'ZDACW 29084' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:38:43.588 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:43.588 -07 000000547 INF: FPGA: Recv ZDACR 29084
17-03-17 21:38:43.598 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:43.598 -07 000000458 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:38:43.598 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:43.758 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:38:43.758 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:38:43.758 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:43.758 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:38:43.758 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:38:43.758 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:43.768 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:43.768 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:38:43.768 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:43.768 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:38:43.978 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 21:38:43.978 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 398 ms overall
17-03-17 21:38:44.008 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:44.018 -07 000000626 INF: FPGA: Recv YRDPOS 129485
17-03-17 21:38:44.018 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:38:44.018 -07 000000429 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:44.018 -07 000000429 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:38:44.018 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.836 mm, average velocity = 2.096 mm/sec
17-03-17 21:38:44.678 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.960826,
17-03-17 21:38:44.968 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:44.968 -07 000000501 INF: FPGA: Recv YRDPOS 129485
17-03-17 21:38:44.978 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:44.978 -07 000000429 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:44.998 -07 000000429 INF: Y Motor: After move to 63.232609, error = -0.007511, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:44.998 -07 000000429 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:44.998 -07 000000429 INF: Y Motor: Moved to 63.2251 after 1430 ms (table move)
17-03-17 21:38:44.998 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133138 mm (DAC = 29084)
17-03-17 21:38:44.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:44.998 -07 000000415 INF: FPGA: Recv ZSGSRD 30015
17-03-17 21:38:45.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:38:45.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.008 -07 000000626 INF: FPGA: Recv ZSGSRD 30004
17-03-17 21:38:45.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.018 -07 000000431 INF: FPGA: Recv ZSGSRD 30012
17-03-17 21:38:45.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.028 -07 000000012 INF: FPGA: Recv ZSGSRD 30018
17-03-17 21:38:45.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.038 -07 000000382 INF: FPGA: Recv ZSGSRD 30018
17-03-17 21:38:45.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.068 -07 000000626 INF: FPGA: Recv ZSGSRD 30012
17-03-17 21:38:45.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:38:45.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.078 -07 000000480 INF: FPGA: Recv ZSGSRD 30011
17-03-17 21:38:45.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.098 -07 000000382 INF: FPGA: Recv ZSGSRD 30021
17-03-17 21:38:45.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:45.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.108 -07 000000431 INF: FPGA: Recv ZSGSRD 30017
17-03-17 21:38:45.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.128 -07 000000438 INF: FPGA: Recv ZSGSRD 30019
17-03-17 21:38:45.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:45.138 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:45.138 -07 000000569 INF: FPGA: Recv ZPIEZORD 25771
17-03-17 21:38:45.148 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.148 -07 000000610 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.438 V. Piezo Error = -9.3 V.
17-03-17 21:38:45.148 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30015 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30016 (-132.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 30004 (-132.3 uncal um), Max = 30021 (-132.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:38:45.148 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30015, posNoise = 6, negNoise = 11
17-03-17 21:38:45.148 -07 000000610 INF: Z Motor: After move to -0.133138, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:45.148 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 144 ms (allowed 150 ms), total time = 1576 ms
17-03-17 21:38:45.148 -07 000000610 INF: Z Motor: Waiting extra 6 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:45.158 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-17 21:38:45.158 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:45.158 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22509765625, Z-position -0.13314607944609. ----------
17-03-17 21:38:45.158 -07 000000610 INF: Cycle	53	Tile	5	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:45.158 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28907, sync = True, waitForSettling = True)
17-03-17 21:38:45.158 -07 000000610 INF: Z Motor: Moving to -0.132328 mm, started at -0.133146 mm, distance = 0.82 um
17-03-17 21:38:45.158 -07 000000610 INF: FPGA: Xmit ZDACW 28907\n [Z Motor]
17-03-17 21:38:45.158 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:38:45.168 -07 000000610 INF: FPGA: 'ZDACW 28907' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:45.168 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:45.168 -07 000000458 INF: FPGA: Recv ZDACR 28907
17-03-17 21:38:45.178 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.178 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:45.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.328 -07 000000547 INF: FPGA: Recv ZSGSRD 29885
17-03-17 21:38:45.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:45.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.338 -07 000000475 INF: FPGA: Recv ZSGSRD 29890
17-03-17 21:38:45.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.348 -07 000000459 INF: FPGA: Recv ZSGSRD 29898
17-03-17 21:38:45.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.358 -07 000000415 INF: FPGA: Recv ZSGSRD 29892
17-03-17 21:38:45.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.368 -07 000000569 INF: FPGA: Recv ZSGSRD 29890
17-03-17 21:38:45.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.378 -07 000000438 INF: FPGA: Recv ZSGSRD 29886
17-03-17 21:38:45.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.388 -07 000000012 INF: FPGA: Recv ZSGSRD 29887
17-03-17 21:38:45.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.398 -07 000000431 INF: FPGA: Recv ZSGSRD 29884
17-03-17 21:38:45.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.408 -07 000000382 INF: FPGA: Recv ZSGSRD 29887
17-03-17 21:38:45.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:45.418 -07 000000480 INF: FPGA: Recv ZSGSRD 29900
17-03-17 21:38:45.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.428 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:45.428 -07 000000424 INF: FPGA: Recv ZPIEZORD 25632
17-03-17 21:38:45.438 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:45.438 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.411 V. Piezo Error = -9.4 V.
17-03-17 21:38:45.438 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29890 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29888 (-131.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29884 (-131.5 uncal um), Max = 29900 (-131.6 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:45.438 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29890, posNoise = 10, negNoise = 6
17-03-17 21:38:45.438 -07 000000610 INF: Z Motor: After move to -0.132328, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:45.438 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:38:45.438 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:45.438 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:45.438 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:45.438 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:45.438 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:45.438 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:45.438 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:45.448 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:45.448 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:38:45.448 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:45.448 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:38:45.448 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:45.448 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:38:45.448 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:45.448 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:45.448 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:45.458 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:38:45.458 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:38:45.458 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 21:38:45.458 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:38:45.458 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 29084 150\n [Camera]
17-03-17 21:38:45.658 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:46.098 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:46.098 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:46.098 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:46.098 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:46.098 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:38:46.098 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:46.098 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:46.098 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:46.218 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:46.218 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:38:46.288 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29084 820
17-03-17 21:38:46.438 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:46.478 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:38:46.478 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:38:46.478 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:46.478 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:46.478 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:38:46.598 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:38:46.598 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:38:46.598 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:46.598 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:46.608 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 505 ms.
17-03-17 21:38:46.648 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:46.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:46.648 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:46.648 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:46.648 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:46.648 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:46.648 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:46.648 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:38:46.648 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:46.648 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:38:46.838 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:46.838 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:46.838 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 29084 150' command took 2 ms to send, 1375 ms to get response, and 1378 ms overall
17-03-17 21:38:46.838 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132737
17-03-17 21:38:46.838 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13274 mm
17-03-17 21:38:46.838 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:46.848 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 21:38:46.848 -07 000000608 INF: Y Motor: Moving to 64.0626 mm, started at 63.2251 mm, delta = 0.8375 mm
17-03-17 21:38:46.848 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:46.848 -07 000000459 INF: Z Motor: Entering MoveAbsStepped (DAC = 28996, sync = True, waitForSettling = False)
17-03-17 21:38:46.848 -07 000000459 INF: Z Motor: Moving to -0.132735 mm, started at -0.132343 mm, distance = -0.39 um
17-03-17 21:38:46.848 -07 000000382 INF: FPGA: Recv YRDPOS 129485
17-03-17 21:38:46.858 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:46.858 -07 000000608 INF: Y Motor: Encoder = 129485 = motor step 101160.2 = 63.2251 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:46.858 -07 000000608 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:46.858 -07 000000608 INF: Y Motor: Moving 1340 steps-15
17-03-17 21:38:46.858 -07 000000459 INF: FPGA: Xmit ZDACW 28996\n [Z Motor]
17-03-17 21:38:46.858 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:38:46.868 -07 000000459 INF: FPGA: 'ZDACW 28996' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:46.868 -07 000000459 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:46.868 -07 000000512 INF: FPGA: Recv ZDACR 28996
17-03-17 21:38:46.878 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:46.878 -07 000000459 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:46.878 -07 000000459 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 21:38:46.898 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:47.028 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:38:47.028 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:38:47.028 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:47.028 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:38:47.028 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:38:47.028 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:47.038 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:47.038 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:38:47.038 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:47.048 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:38:47.258 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-17 21:38:47.258 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 398 ms overall
17-03-17 21:38:47.298 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:47.298 -07 000000459 INF: FPGA: Recv YRDPOS 131190
17-03-17 21:38:47.308 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:47.308 -07 000000608 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:47.308 -07 000000608 INF: Y Motor: Position error before settling (table move) = -10 encoder counts (-0.005 mm)
17-03-17 21:38:47.308 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.838 mm, average velocity = 2.099 mm/sec
17-03-17 21:38:48.258 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:48.258 -07 000000512 INF: FPGA: Recv YRDPOS 131190
17-03-17 21:38:48.268 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:48.268 -07 000000608 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:48.278 -07 000000608 INF: Y Motor: After move to 64.062607, error = -0.004990, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:48.278 -07 000000608 INF: Y Motor: Position error after settling (table move) = -10 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:48.278 -07 000000608 INF: Y Motor: Moved to 64.0576 after 1439 ms (table move)
17-03-17 21:38:48.288 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132735 mm (DAC = 28996)
17-03-17 21:38:48.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.288 -07 000000415 INF: FPGA: Recv ZSGSRD 29962
17-03-17 21:38:48.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:48.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.298 -07 000000429 INF: FPGA: Recv ZSGSRD 29958
17-03-17 21:38:48.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:48.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.308 -07 000000608 INF: FPGA: Recv ZSGSRD 29944
17-03-17 21:38:48.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.318 -07 000000438 INF: FPGA: Recv ZSGSRD 29951
17-03-17 21:38:48.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.328 -07 000000424 INF: FPGA: Recv ZSGSRD 29952
17-03-17 21:38:48.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.338 -07 000000459 INF: FPGA: Recv ZSGSRD 29960
17-03-17 21:38:48.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.348 -07 000000476 INF: FPGA: Recv ZSGSRD 29954
17-03-17 21:38:48.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.358 -07 000000458 INF: FPGA: Recv ZSGSRD 29954
17-03-17 21:38:48.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.368 -07 000000415 INF: FPGA: Recv ZSGSRD 29956
17-03-17 21:38:48.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.378 -07 000000627 INF: FPGA: Recv ZSGSRD 29950
17-03-17 21:38:48.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.388 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:48.388 -07 000000512 INF: FPGA: Recv ZPIEZORD 25727
17-03-17 21:38:48.398 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.398 -07 000000610 INF: Z Motor: Piezo is near 35.0 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.425 V. Piezo Error = -9.3 V.
17-03-17 21:38:48.398 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29954 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29954 (-132.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29944 (-131.9 uncal um), Max = 29962 (-132.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:38:48.398 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29954, posNoise = 8, negNoise = 10
17-03-17 21:38:48.398 -07 000000610 INF: Z Motor: After move to -0.132735, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:48.398 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 109 ms (allowed 150 ms), total time = 1550 ms
17-03-17 21:38:48.398 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:48.448 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-17 21:38:48.448 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:48.448 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0576171875, Z-position -0.132754202505443. ----------
17-03-17 21:38:48.448 -07 000000610 INF: Cycle	53	Tile	6	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:48.448 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28820, sync = True, waitForSettling = True)
17-03-17 21:38:48.448 -07 000000610 INF: Z Motor: Moving to -0.131930 mm, started at -0.132754 mm, distance = 0.82 um
17-03-17 21:38:48.448 -07 000000610 INF: FPGA: Xmit ZDACW 28820\n [Z Motor]
17-03-17 21:38:48.448 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 21:38:48.458 -07 000000610 INF: FPGA: 'ZDACW 28820' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:48.458 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:48.458 -07 000000012 INF: FPGA: Recv ZDACR 28820
17-03-17 21:38:48.468 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.468 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:48.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.618 -07 000000475 INF: FPGA: Recv ZSGSRD 29828
17-03-17 21:38:48.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:48.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.628 -07 000000576 INF: FPGA: Recv ZSGSRD 29823
17-03-17 21:38:48.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.638 -07 000000501 INF: FPGA: Recv ZSGSRD 29828
17-03-17 21:38:48.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.648 -07 000000424 INF: FPGA: Recv ZSGSRD 29822
17-03-17 21:38:48.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.658 -07 000000480 INF: FPGA: Recv ZSGSRD 29831
17-03-17 21:38:48.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:48.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.668 -07 000000512 INF: FPGA: Recv ZSGSRD 29826
17-03-17 21:38:48.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.678 -07 000000475 INF: FPGA: Recv ZSGSRD 29825
17-03-17 21:38:48.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.688 -07 000000626 INF: FPGA: Recv ZSGSRD 29827
17-03-17 21:38:48.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.698 -07 000000382 INF: FPGA: Recv ZSGSRD 29823
17-03-17 21:38:48.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:48.708 -07 000000576 INF: FPGA: Recv ZSGSRD 29822
17-03-17 21:38:48.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.718 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:48.718 -07 000000459 INF: FPGA: Recv ZPIEZORD 25516
17-03-17 21:38:48.728 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:48.728 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.398 V. Piezo Error = -9.5 V.
17-03-17 21:38:48.728 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29826 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29826 (-131.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29822 (-131.1 uncal um), Max = 29831 (-131.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:38:48.728 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29826, posNoise = 5, negNoise = 4
17-03-17 21:38:48.728 -07 000000610 INF: Z Motor: After move to -0.131930, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:48.728 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:38:48.728 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:48.728 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:48.728 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:48.728 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:48.728 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:48.728 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:48.728 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:48.728 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:48.728 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:48.728 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:48.728 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:48.728 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:48.738 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:48.738 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:48.738 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:48.738 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:48.748 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:38:48.748 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:48.748 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:38:48.748 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:48.758 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28996 150\n [Camera]
17-03-17 21:38:48.948 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:49.388 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:49.388 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:49.388 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:49.388 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:49.388 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:38:49.388 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:49.388 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:49.388 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:49.388 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:49.388 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:38:49.578 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28996 821
17-03-17 21:38:49.728 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:49.768 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:38:49.768 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:38:49.768 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:49.768 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:38:49.768 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:38:49.768 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:49.768 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:49.768 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:38:49.778 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:49.778 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:38:49.938 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:49.938 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:49.938 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:49.938 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:49.938 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:38:49.938 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:49.938 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:49.948 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:49.948 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:49.948 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 21:38:50.038 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.007176,
17-03-17 21:38:50.128 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:50.128 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:50.128 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28996 150' command took 2 ms to send, 1368 ms to get response, and 1378 ms overall
17-03-17 21:38:50.138 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.132459
17-03-17 21:38:50.138 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13246 mm
17-03-17 21:38:50.138 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:50.138 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 21:38:50.138 -07 000000382 INF: Y Motor: Moving to 64.8926 mm, started at 64.0576 mm, delta = 0.8350 mm
17-03-17 21:38:50.138 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:50.138 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 28936, sync = True, waitForSettling = False)
17-03-17 21:38:50.138 -07 000000424 INF: Z Motor: Moving to -0.132461 mm, started at -0.131932 mm, distance = -0.53 um
17-03-17 21:38:50.138 -07 000000608 INF: FPGA: Recv YRDPOS 131190
17-03-17 21:38:50.148 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:38:50.148 -07 000000382 INF: Y Motor: Encoder = 131190 = motor step 102492.2 = 64.0576 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:50.148 -07 000000382 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:50.148 -07 000000382 INF: Y Motor: Moving 1336 steps-10
17-03-17 21:38:50.148 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:50.158 -07 000000424 INF: FPGA: Xmit ZDACW 28936\n [Z Motor]
17-03-17 21:38:50.158 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:38:50.168 -07 000000424 INF: FPGA: 'ZDACW 28936' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 21:38:50.178 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:50.178 -07 000000431 INF: FPGA: Recv ZDACR 28936
17-03-17 21:38:50.188 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:50.188 -07 000000424 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-17 21:38:50.328 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:38:50.328 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:38:50.328 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:50.328 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 21:38:50.328 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:38:50.328 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:50.328 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:50.328 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:50.328 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:38:50.338 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:38:50.518 -07 000000459 INF: FPGA: Recv YMVTILE
17-03-17 21:38:50.518 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-17 21:38:50.558 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:50.558 -07 000000480 INF: FPGA: Recv YRDPOS 132874
17-03-17 21:38:50.568 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:50.568 -07 000000382 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:50.568 -07 000000382 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm)
17-03-17 21:38:50.568 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.835 mm, average velocity = 2.209 mm/sec
17-03-17 21:38:51.518 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:51.518 -07 000000501 INF: FPGA: Recv YRDPOS 132874
17-03-17 21:38:51.528 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:51.528 -07 000000382 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:51.548 -07 000000382 INF: Y Motor: After move to 64.892609, error = -0.012726, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:51.548 -07 000000382 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:51.548 -07 000000382 INF: Y Motor: Moved to 64.8799 after 1411 ms (table move)
17-03-17 21:38:51.548 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132461 mm (DAC = 28936)
17-03-17 21:38:51.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.558 -07 000000475 INF: FPGA: Recv ZSGSRD 29914
17-03-17 21:38:51.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:38:51.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.558 -07 000000608 INF: FPGA: Recv ZSGSRD 29906
17-03-17 21:38:51.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:51.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.568 -07 000000415 INF: FPGA: Recv ZSGSRD 29911
17-03-17 21:38:51.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.578 -07 000000431 INF: FPGA: Recv ZSGSRD 29908
17-03-17 21:38:51.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.588 -07 000000429 INF: FPGA: Recv ZSGSRD 29911
17-03-17 21:38:51.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.598 -07 000000459 INF: FPGA: Recv ZSGSRD 29911
17-03-17 21:38:51.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.608 -07 000000012 INF: FPGA: Recv ZSGSRD 29910
17-03-17 21:38:51.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.618 -07 000000382 INF: FPGA: Recv ZSGSRD 29913
17-03-17 21:38:51.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:51.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.628 -07 000000547 INF: FPGA: Recv ZSGSRD 29898
17-03-17 21:38:51.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.638 -07 000000576 INF: FPGA: Recv ZSGSRD 29908
17-03-17 21:38:51.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.648 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:51.648 -07 000000424 INF: FPGA: Recv ZPIEZORD 25657
17-03-17 21:38:51.658 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.658 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.415 V. Piezo Error = -9.3 V.
17-03-17 21:38:51.658 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29909 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29910 (-131.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29898 (-131.6 uncal um), Max = 29914 (-131.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:38:51.658 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29909, posNoise = 5, negNoise = 11
17-03-17 21:38:51.658 -07 000000610 INF: Z Motor: After move to -0.132461, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:51.658 -07 000000610 INF: Z Motor: Settle wait time = 1413 ms, measure time = 102 ms (allowed 150 ms), total time = 1515 ms
17-03-17 21:38:51.658 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:51.708 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1567 ms
17-03-17 21:38:51.708 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:51.708 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.8798828125, Z-position -0.132465112959063. ----------
17-03-17 21:38:51.708 -07 000000610 INF: Cycle	53	Tile	7	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:51.708 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28759, sync = True, waitForSettling = True)
17-03-17 21:38:51.708 -07 000000610 INF: Z Motor: Moving to -0.131650 mm, started at -0.132465 mm, distance = 0.81 um
17-03-17 21:38:51.708 -07 000000610 INF: FPGA: Xmit ZDACW 28759\n [Z Motor]
17-03-17 21:38:51.708 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 21:38:51.718 -07 000000610 INF: FPGA: 'ZDACW 28759' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:38:51.718 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:51.718 -07 000000424 INF: FPGA: Recv ZDACR 28759
17-03-17 21:38:51.728 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.728 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:51.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.878 -07 000000569 INF: FPGA: Recv ZSGSRD 29780
17-03-17 21:38:51.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.888 -07 000000458 INF: FPGA: Recv ZSGSRD 29789
17-03-17 21:38:51.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:51.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:51.898 -07 000000576 INF: FPGA: Recv ZSGSRD 29785
17-03-17 21:38:51.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.908 -07 000000475 INF: FPGA: Recv ZSGSRD 29781
17-03-17 21:38:51.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.918 -07 000000459 INF: FPGA: Recv ZSGSRD 29782
17-03-17 21:38:51.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.928 -07 000000458 INF: FPGA: Recv ZSGSRD 29779
17-03-17 21:38:51.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.938 -07 000000424 INF: FPGA: Recv ZSGSRD 29784
17-03-17 21:38:51.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.948 -07 000000569 INF: FPGA: Recv ZSGSRD 29777
17-03-17 21:38:51.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.958 -07 000000382 INF: FPGA: Recv ZSGSRD 29781
17-03-17 21:38:51.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:51.968 -07 000000627 INF: FPGA: Recv ZSGSRD 29781
17-03-17 21:38:51.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.978 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:51.978 -07 000000547 INF: FPGA: Recv ZPIEZORD 25456
17-03-17 21:38:51.988 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:51.988 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.388 V. Piezo Error = -9.5 V.
17-03-17 21:38:51.988 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29782 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29781 (-130.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29777 (-130.8 uncal um), Max = 29789 (-130.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:38:51.988 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29782, posNoise = 7, negNoise = 5
17-03-17 21:38:51.988 -07 000000610 INF: Z Motor: After move to -0.131650, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:51.988 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:38:51.988 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:51.988 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:51.988 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:51.988 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:51.988 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:51.988 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:51.988 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:51.988 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:51.988 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:38:51.988 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:51.988 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:51.988 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:51.988 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:51.988 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:51.988 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:51.988 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:52.008 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:38:52.008 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:38:52.008 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:38:52.008 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:38:52.008 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28936 150\n [Camera]
17-03-17 21:38:52.208 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:52.648 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:52.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:52.648 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:52.648 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:52.648 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:38:52.648 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:52.648 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:52.648 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:52.648 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:52.648 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:38:52.838 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28936 820
17-03-17 21:38:52.988 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:53.028 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:38:53.028 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:38:53.028 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:53.028 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:38:53.028 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:38:53.028 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:53.028 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:53.028 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:38:53.028 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:53.038 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:38:53.198 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:53.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:53.198 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:53.198 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:53.198 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:38:53.198 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:53.198 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:53.198 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:53.328 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:53.328 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:38:53.388 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:38:53.388 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:53.388 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28936 150' command took 2 ms to send, 1367 ms to get response, and 1378 ms overall
17-03-17 21:38:53.398 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:38:53.398 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.8798828125, Z-Position -0.13164923801706. ------
17-03-17 21:38:53.398 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:53.398 -07 000000458 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13834 mm
17-03-17 21:38:53.398 -07 000000458 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:53.398 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 21:38:53.398 -07 000000012 INF: Y Motor: Moving to 65.7226 mm, started at 64.8799 mm, delta = 0.8427 mm
17-03-17 21:38:53.398 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 30221, sync = True, waitForSettling = False)
17-03-17 21:38:53.398 -07 000000512 INF: Z Motor: Moving to -0.138343 mm, started at -0.131649 mm, distance = -6.69 um
17-03-17 21:38:53.398 -07 000000431 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:53.408 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:53.408 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:53.408 -07 000000547 INF: FPGA: Recv YRDPOS 132874
17-03-17 21:38:53.418 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:38:53.418 -07 000000012 INF: Y Motor: Encoder = 132874 = motor step 103807.8 = 64.8799 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:53.418 -07 000000012 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:53.418 -07 000000012 INF: Y Motor: Moving 1348 steps-26
17-03-17 21:38:53.418 -07 000000627 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:38:53.428 -07 000000512 INF: FPGA: Xmit ZDACW 30221\n [Z Motor]
17-03-17 21:38:53.428 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:38:53.438 -07 000000512 INF: FPGA: 'ZDACW 30221' command took 0 ms to send, 0 ms to get response, and 32 ms overall
17-03-17 21:38:53.438 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:53.448 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:53.448 -07 000000429 INF: FPGA: Recv ZDACR 30221
17-03-17 21:38:53.458 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:53.458 -07 000000512 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-17 21:38:53.588 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:38:53.588 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:38:53.588 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:53.598 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:53.598 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:38:53.618 -07 000000459 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:38:53.618 -07 000000627 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 213 ms overall
17-03-17 21:38:53.708 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:38:53.708 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:38:53.708 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:53.708 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:53.718 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-17 21:38:53.808 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 21:38:53.808 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-17 21:38:53.848 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:53.848 -07 000000627 INF: FPGA: Recv YRDPOS 134584
17-03-17 21:38:53.858 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:53.858 -07 000000012 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:53.858 -07 000000012 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 21:38:53.858 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.117 mm/sec
17-03-17 21:38:54.808 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:54.808 -07 000000480 INF: FPGA: Recv YRDPOS 134584
17-03-17 21:38:54.818 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.818 -07 000000012 INF: Y Motor: Encoder = 134584 = motor step 105143.8 = 65.7148 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:54.838 -07 000000012 INF: Y Motor: After move to 65.722610, error = -0.007767, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:54.838 -07 000000012 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:54.838 -07 000000012 INF: Y Motor: Moved to 65.7148 after 1439 ms (table move)
17-03-17 21:38:54.838 -07 000000458 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138343 mm (DAC = 30221)
17-03-17 21:38:54.848 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.848 -07 000000501 INF: FPGA: Recv ZSGSRD 30827
17-03-17 21:38:54.858 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:54.858 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.858 -07 000000459 INF: FPGA: Recv ZSGSRD 30821
17-03-17 21:38:54.868 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.868 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.868 -07 000000415 INF: FPGA: Recv ZSGSRD 30824
17-03-17 21:38:54.878 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.878 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.878 -07 000000627 INF: FPGA: Recv ZSGSRD 30829
17-03-17 21:38:54.888 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.888 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.888 -07 000000382 INF: FPGA: Recv ZSGSRD 30822
17-03-17 21:38:54.898 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.898 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.898 -07 000000608 INF: FPGA: Recv ZSGSRD 30824
17-03-17 21:38:54.908 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.908 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.908 -07 000000438 INF: FPGA: Recv ZSGSRD 30818
17-03-17 21:38:54.918 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.918 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.918 -07 000000512 INF: FPGA: Recv ZSGSRD 30821
17-03-17 21:38:54.928 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.928 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.928 -07 000000475 INF: FPGA: Recv ZSGSRD 30826
17-03-17 21:38:54.938 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.938 -07 000000458 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:54.938 -07 000000382 INF: FPGA: Recv ZSGSRD 30825
17-03-17 21:38:54.948 -07 000000458 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.948 -07 000000458 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:54.948 -07 000000415 INF: FPGA: Recv ZPIEZORD 26864
17-03-17 21:38:54.958 -07 000000458 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:54.958 -07 000000458 INF: Z Motor: Piezo is near 37.4 V (nominally 0 to 100 V), expect near 46.1 V, since DAC is at 4.611 V. Piezo Error = -8.7 V.
17-03-17 21:38:54.958 -07 000000458 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.3 um, Read 10 ADC samples: Avg = 30824 (-137.5 uncal um), Error = 0.8 uncal um, Median = 30824 (-137.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30818 (-137.5 uncal um), Max = 30829 (-137.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:38:54.958 -07 000000458 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30824, posNoise = 5, negNoise = 6
17-03-17 21:38:54.958 -07 000000458 INF: Z Motor: After move to -0.138343, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:54.958 -07 000000458 INF: Z Motor: Settle wait time = 1442 ms, measure time = 111 ms (allowed 150 ms), total time = 1553 ms
17-03-17 21:38:54.958 -07 000000458 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:54.998 -07 000000458 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-17 21:38:54.998 -07 000000458 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:54.998 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:54.998 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:54.998 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:54.998 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:54.998 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:38:54.998 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:54.998 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:38:54.998 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:38:55.008 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:38:55.008 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:38:55.018 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms.
17-03-17 21:38:55.018 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 21:38:55.018 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:38:55.058 -07 000000608 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:38:55.258 -07 000000576 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:38:55.258 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:38:55.268 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:38:55.268 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2182910056, 0x0, 559484976) start.
17-03-17 21:38:55.298 -07 000000512 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:38:55.298 -07 000000415 INF: FPGA: Recv CAMSNAP
17-03-17 21:38:55.298 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 284 ms overall
17-03-17 21:38:55.388 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2182910056, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:38:55.388 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:55.388 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:38:55.388 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 21:38:55.398 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.993549,
17-03-17 21:38:55.498 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:38:55.498 -07 000000480 INF: Autofocus start
17-03-17 21:38:55.498 -07 000000480 INF: MeasureProfile start
17-03-17 21:38:55.498 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:38:55.508 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:38:55.508 -07 000000608 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:38:55.508 -07 000000480 INF: MeasureProfile done
17-03-17 21:38:55.508 -07 000000480 INF: X=20  Z correction [um]=0.07225946
17-03-17 21:38:55.508 -07 000000480 INF: Autofocus finished
17-03-17 21:38:55.708 -07 000000475 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:38:55.708 -07 000000608 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:38:55.708 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71484375, Z-position -0.138343267068775. ----------
17-03-17 21:38:55.708 -07 000000610 INF: Cycle	53	Tile	8	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:55.718 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28749, sync = True, waitForSettling = True)
17-03-17 21:38:55.718 -07 000000610 INF: Z Motor: Moving to -0.131604 mm, started at -0.138343 mm, distance = 6.74 um
17-03-17 21:38:55.718 -07 000000610 INF: FPGA: Xmit ZDACW 28749\n [Z Motor]
17-03-17 21:38:55.718 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:38:55.728 -07 000000610 INF: FPGA: 'ZDACW 28749' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:55.728 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:55.728 -07 000000626 INF: FPGA: Recv ZDACR 28749
17-03-17 21:38:55.738 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.738 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:55.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.888 -07 000000576 INF: FPGA: Recv ZSGSRD 29777
17-03-17 21:38:55.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.898 -07 000000476 INF: FPGA: Recv ZSGSRD 29777
17-03-17 21:38:55.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.908 -07 000000431 INF: FPGA: Recv ZSGSRD 29779
17-03-17 21:38:55.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.918 -07 000000459 INF: FPGA: Recv ZSGSRD 29774
17-03-17 21:38:55.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.928 -07 000000429 INF: FPGA: Recv ZSGSRD 29775
17-03-17 21:38:55.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.938 -07 000000501 INF: FPGA: Recv ZSGSRD 29777
17-03-17 21:38:55.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.948 -07 000000424 INF: FPGA: Recv ZSGSRD 29774
17-03-17 21:38:55.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.958 -07 000000626 INF: FPGA: Recv ZSGSRD 29780
17-03-17 21:38:55.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.968 -07 000000459 INF: FPGA: Recv ZSGSRD 29776
17-03-17 21:38:55.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:55.978 -07 000000547 INF: FPGA: Recv ZSGSRD 29780
17-03-17 21:38:55.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.988 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:55.988 -07 000000576 INF: FPGA: Recv ZPIEZORD 25481
17-03-17 21:38:55.998 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:55.998 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.387 V. Piezo Error = -9.4 V.
17-03-17 21:38:55.998 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29777 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29777 (-130.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29774 (-130.8 uncal um), Max = 29780 (-130.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:38:55.998 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29777, posNoise = 3, negNoise = 3
17-03-17 21:38:55.998 -07 000000610 INF: Z Motor: After move to -0.131604, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:55.998 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:38:55.998 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:55.998 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:55.998 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:55.998 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:55.998 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:55.998 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:55.998 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:55.998 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:55.998 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:38:55.998 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:55.998 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:55.998 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:56.008 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:56.008 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:56.008 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:38:56.008 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:56.018 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:38:56.018 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:38:56.018 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:38:56.018 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:38:56.018 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28926 150\n [Camera]
17-03-17 21:38:56.218 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:56.648 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:56.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:56.648 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:56.658 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:56.658 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:56.658 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:56.658 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:56.658 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 21:38:56.658 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:56.658 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:38:56.848 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28926 820
17-03-17 21:38:56.898 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:38:56.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:38:56.998 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:38:57.028 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:38:57.028 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:38:57.028 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:57.038 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:57.038 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:38:57.038 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:38:57.038 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:57.038 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:57.038 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:38:57.038 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:38:57.208 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:38:57.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:38:57.208 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:57.308 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:38:57.308 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:38:57.308 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:57.308 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:57.308 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 21:38:57.318 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:57.318 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2197586136, 0x0, 418435064) start.
17-03-17 21:38:57.398 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:38:57.398 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:38:57.398 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28926 150' command took 2 ms to send, 1372 ms to get response, and 1379 ms overall
17-03-17 21:38:57.398 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131931
17-03-17 21:38:57.398 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13193 mm
17-03-17 21:38:57.398 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:38:57.398 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 28820, sync = True, waitForSettling = False)
17-03-17 21:38:57.408 -07 000000382 INF: Z Motor: Moving to -0.131930 mm, started at -0.131617 mm, distance = -0.31 um
17-03-17 21:38:57.408 -07 000000382 INF: FPGA: Xmit ZDACW 28820\n [Z Motor]
17-03-17 21:38:57.408 -07 000000415 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 21:38:57.408 -07 000000415 INF: Y Motor: Moving to 66.5526 mm, started at 65.7148 mm, delta = 0.8378 mm
17-03-17 21:38:57.408 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:38:57.418 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:57.418 -07 000000382 INF: FPGA: 'ZDACW 28820' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:57.418 -07 000000476 INF: FPGA: Recv YRDPOS 134585
17-03-17 21:38:57.428 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:57.428 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:57.428 -07 000000415 INF: Y Motor: Encoder = 134585 = motor step 105144.5 = 65.7153 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:57.428 -07 000000475 INF: FPGA: Recv ZDACR 28820
17-03-17 21:38:57.438 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:38:57.438 -07 000000382 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 21:38:57.438 -07 000000415 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:38:57.438 -07 000000415 INF: Y Motor: Moving 1340 steps-16
17-03-17 21:38:57.438 -07 000000415 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:38:57.688 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2197586136, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:38:57.688 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:38:57.688 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:57.698 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:38:57.698 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:38:57.698 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:38:57.698 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:38:57.698 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:38:57.698 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 493 ms.
17-03-17 21:38:57.698 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:38:57.818 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 21:38:57.818 -07 000000415 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 373 ms to get response, and 378 ms overall
17-03-17 21:38:57.858 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:57.858 -07 000000424 INF: FPGA: Recv YRDPOS 136274
17-03-17 21:38:57.868 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:38:57.868 -07 000000415 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:57.868 -07 000000415 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm)
17-03-17 21:38:57.868 -07 000000415 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.838 mm, average velocity = 2.199 mm/sec
17-03-17 21:38:58.818 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:38:58.818 -07 000000382 INF: FPGA: Recv YRDPOS 136274
17-03-17 21:38:58.828 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.828 -07 000000415 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:38:58.848 -07 000000415 INF: Y Motor: After move to 66.552605, error = -0.012566, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:38:58.848 -07 000000415 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:38:58.848 -07 000000415 INF: Y Motor: Moved to 66.5400 after 1444 ms (table move)
17-03-17 21:38:58.848 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131930 mm (DAC = 28820)
17-03-17 21:38:58.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.858 -07 000000576 INF: FPGA: Recv ZSGSRD 29830
17-03-17 21:38:58.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:38:58.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.858 -07 000000480 INF: FPGA: Recv ZSGSRD 29818
17-03-17 21:38:58.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:38:58.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.868 -07 000000627 INF: FPGA: Recv ZSGSRD 29827
17-03-17 21:38:58.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.878 -07 000000547 INF: FPGA: Recv ZSGSRD 29818
17-03-17 21:38:58.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.888 -07 000000475 INF: FPGA: Recv ZSGSRD 29830
17-03-17 21:38:58.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.898 -07 000000429 INF: FPGA: Recv ZSGSRD 29829
17-03-17 21:38:58.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.908 -07 000000608 INF: FPGA: Recv ZSGSRD 29827
17-03-17 21:38:58.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.918 -07 000000012 INF: FPGA: Recv ZSGSRD 29825
17-03-17 21:38:58.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.928 -07 000000569 INF: FPGA: Recv ZSGSRD 29825
17-03-17 21:38:58.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:58.938 -07 000000415 INF: FPGA: Recv ZSGSRD 29824
17-03-17 21:38:58.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.948 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:58.948 -07 000000626 INF: FPGA: Recv ZPIEZORD 25552
17-03-17 21:38:58.958 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:58.958 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.398 V. Piezo Error = -9.4 V.
17-03-17 21:38:58.958 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29825 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29826 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29818 (-131.1 uncal um), Max = 29830 (-131.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:38:58.958 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29825, posNoise = 5, negNoise = 7
17-03-17 21:38:58.958 -07 000000610 INF: Z Motor: After move to -0.131930, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:58.958 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 103 ms (allowed 150 ms), total time = 1550 ms
17-03-17 21:38:58.958 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:38:59.008 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-17 21:38:59.008 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:38:59.008 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5400390625, Z-position -0.131925479139156. ----------
17-03-17 21:38:59.008 -07 000000610 INF: Cycle	53	Tile	9	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:38:59.008 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28644, sync = True, waitForSettling = True)
17-03-17 21:38:59.008 -07 000000610 INF: Z Motor: Moving to -0.131124 mm, started at -0.131925 mm, distance = 0.80 um
17-03-17 21:38:59.008 -07 000000610 INF: FPGA: Xmit ZDACW 28644\n [Z Motor]
17-03-17 21:38:59.008 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:38:59.018 -07 000000610 INF: FPGA: 'ZDACW 28644' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:38:59.018 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:38:59.018 -07 000000476 INF: FPGA: Recv ZDACR 28644
17-03-17 21:38:59.028 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.028 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:38:59.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.178 -07 000000576 INF: FPGA: Recv ZSGSRD 29698
17-03-17 21:38:59.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:38:59.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.188 -07 000000501 INF: FPGA: Recv ZSGSRD 29703
17-03-17 21:38:59.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.198 -07 000000012 INF: FPGA: Recv ZSGSRD 29708
17-03-17 21:38:59.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.208 -07 000000547 INF: FPGA: Recv ZSGSRD 29705
17-03-17 21:38:59.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.218 -07 000000475 INF: FPGA: Recv ZSGSRD 29701
17-03-17 21:38:59.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.228 -07 000000627 INF: FPGA: Recv ZSGSRD 29701
17-03-17 21:38:59.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.238 -07 000000382 INF: FPGA: Recv ZSGSRD 29703
17-03-17 21:38:59.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.248 -07 000000458 INF: FPGA: Recv ZSGSRD 29706
17-03-17 21:38:59.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.258 -07 000000512 INF: FPGA: Recv ZSGSRD 29702
17-03-17 21:38:59.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:38:59.268 -07 000000501 INF: FPGA: Recv ZSGSRD 29698
17-03-17 21:38:59.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.278 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:38:59.278 -07 000000476 INF: FPGA: Recv ZPIEZORD 25374
17-03-17 21:38:59.288 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:38:59.288 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.371 V. Piezo Error = -9.5 V.
17-03-17 21:38:59.288 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29702 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29702 (-130.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29698 (-130.3 uncal um), Max = 29708 (-130.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:38:59.288 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29702, posNoise = 6, negNoise = 4
17-03-17 21:38:59.288 -07 000000610 INF: Z Motor: After move to -0.131124, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:38:59.288 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:38:59.288 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:38:59.288 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:38:59.288 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:38:59.288 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:38:59.288 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:38:59.288 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:38:59.288 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:38:59.288 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:38:59.288 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:38:59.288 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:38:59.288 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:38:59.288 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:38:59.298 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:38:59.298 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:38:59.298 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:38:59.298 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:38:59.308 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 21:38:59.308 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:59.308 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:38:59.308 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:38:59.308 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28820 150\n [Camera]
17-03-17 21:38:59.508 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:38:59.948 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:38:59.948 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:38:59.948 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:38:59.948 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:38:59.948 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:38:59.948 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:38:59.948 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:38:59.948 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:38:59.958 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:38:59.958 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:39:00.138 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28820 820
17-03-17 21:39:00.288 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:00.328 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:39:00.328 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 21:39:00.328 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:00.328 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 369 ms.
17-03-17 21:39:00.328 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 21:39:00.328 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:00.328 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:00.328 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:39:00.328 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:00.338 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:39:00.498 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:00.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:00.498 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:00.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:00.498 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:00.498 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:00.498 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:39:00.498 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:00.498 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:00.498 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:39:00.688 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:00.688 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:00.688 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28820 150' command took 2 ms to send, 1366 ms to get response, and 1379 ms overall
17-03-17 21:39:00.688 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131892
17-03-17 21:39:00.688 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13189 mm
17-03-17 21:39:00.688 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:00.698 -07 000000415 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 21:39:00.698 -07 000000415 INF: Y Motor: Moving to 67.3826 mm, started at 66.5400 mm, delta = 0.8426 mm
17-03-17 21:39:00.698 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:00.698 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 28812, sync = True, waitForSettling = False)
17-03-17 21:39:00.698 -07 000000476 INF: Z Motor: Moving to -0.131893 mm, started at -0.131135 mm, distance = -0.76 um
17-03-17 21:39:00.698 -07 000000626 INF: FPGA: Recv YRDPOS 136274
17-03-17 21:39:00.708 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:00.708 -07 000000415 INF: Y Motor: Encoder = 136274 = motor step 106464.1 = 66.5400 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:00.708 -07 000000415 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:00.708 -07 000000415 INF: Y Motor: Moving 1348 steps-26
17-03-17 21:39:00.708 -07 000000476 INF: FPGA: Xmit ZDACW 28812\n [Z Motor]
17-03-17 21:39:00.708 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:39:00.718 -07 000000476 INF: FPGA: 'ZDACW 28812' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:39:00.718 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:00.718 -07 000000627 INF: FPGA: Recv ZDACR 28812
17-03-17 21:39:00.728 -07 000000415 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:00.728 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:00.728 -07 000000476 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-17 21:39:00.758 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.008536,
17-03-17 21:39:00.888 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 21:39:00.888 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:39:00.888 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:00.888 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 21:39:00.888 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:39:00.888 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:00.888 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:00.888 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:39:00.888 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:00.898 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:39:01.098 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-17 21:39:01.098 -07 000000415 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:39:01.138 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:01.148 -07 000000431 INF: FPGA: Recv YRDPOS 137980
17-03-17 21:39:01.148 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:39:01.148 -07 000000415 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:01.148 -07 000000415 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 21:39:01.148 -07 000000415 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.122 mm/sec
17-03-17 21:39:01.898 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:01.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:02.098 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:02.098 -07 000000431 INF: FPGA: Recv YRDPOS 137980
17-03-17 21:39:02.108 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:02.108 -07 000000415 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:02.128 -07 000000415 INF: Y Motor: After move to 67.382607, error = -0.009560, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:02.128 -07 000000415 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:02.128 -07 000000415 INF: Y Motor: Moved to 67.3730 after 1432 ms (table move)
17-03-17 21:39:02.128 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131893 mm (DAC = 28812)
17-03-17 21:39:02.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.138 -07 000000459 INF: FPGA: Recv ZSGSRD 29823
17-03-17 21:39:02.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:02.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.138 -07 000000438 INF: FPGA: Recv ZSGSRD 29818
17-03-17 21:39:02.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.148 -07 000000476 INF: FPGA: Recv ZSGSRD 29817
17-03-17 21:39:02.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.158 -07 000000608 INF: FPGA: Recv ZSGSRD 29824
17-03-17 21:39:02.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.168 -07 000000501 INF: FPGA: Recv ZSGSRD 29825
17-03-17 21:39:02.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.178 -07 000000627 INF: FPGA: Recv ZSGSRD 29819
17-03-17 21:39:02.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.188 -07 000000458 INF: FPGA: Recv ZSGSRD 29826
17-03-17 21:39:02.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.198 -07 000000475 INF: FPGA: Recv ZSGSRD 29816
17-03-17 21:39:02.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.208 -07 000000569 INF: FPGA: Recv ZSGSRD 29817
17-03-17 21:39:02.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.218 -07 000000424 INF: FPGA: Recv ZSGSRD 29812
17-03-17 21:39:02.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.228 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:02.228 -07 000000480 INF: FPGA: Recv ZPIEZORD 25578
17-03-17 21:39:02.238 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.238 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -9.3 V.
17-03-17 21:39:02.238 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29820 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29818 (-131.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29812 (-131.1 uncal um), Max = 29826 (-131.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:39:02.238 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29820, posNoise = 6, negNoise = 8
17-03-17 21:39:02.238 -07 000000610 INF: Z Motor: After move to -0.131893, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:02.238 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 104 ms (allowed 150 ms), total time = 1539 ms
17-03-17 21:39:02.238 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:02.288 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-17 21:39:02.288 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:02.288 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.373046875, Z-position -0.131893358078447. ----------
17-03-17 21:39:02.288 -07 000000610 INF: Cycle	53	Tile	10	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:02.288 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28635, sync = True, waitForSettling = True)
17-03-17 21:39:02.288 -07 000000610 INF: Z Motor: Moving to -0.131083 mm, started at -0.131893 mm, distance = 0.81 um
17-03-17 21:39:02.288 -07 000000610 INF: FPGA: Xmit ZDACW 28635\n [Z Motor]
17-03-17 21:39:02.288 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:39:02.298 -07 000000610 INF: FPGA: 'ZDACW 28635' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:39:02.298 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:02.298 -07 000000480 INF: FPGA: Recv ZDACR 28635
17-03-17 21:39:02.308 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.308 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:02.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.458 -07 000000438 INF: FPGA: Recv ZSGSRD 29689
17-03-17 21:39:02.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:02.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.468 -07 000000458 INF: FPGA: Recv ZSGSRD 29698
17-03-17 21:39:02.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.478 -07 000000431 INF: FPGA: Recv ZSGSRD 29697
17-03-17 21:39:02.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.488 -07 000000608 INF: FPGA: Recv ZSGSRD 29695
17-03-17 21:39:02.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.498 -07 000000569 INF: FPGA: Recv ZSGSRD 29696
17-03-17 21:39:02.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.508 -07 000000476 INF: FPGA: Recv ZSGSRD 29698
17-03-17 21:39:02.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.518 -07 000000547 INF: FPGA: Recv ZSGSRD 29695
17-03-17 21:39:02.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.528 -07 000000012 INF: FPGA: Recv ZSGSRD 29691
17-03-17 21:39:02.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.538 -07 000000576 INF: FPGA: Recv ZSGSRD 29691
17-03-17 21:39:02.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:02.548 -07 000000382 INF: FPGA: Recv ZSGSRD 29700
17-03-17 21:39:02.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.558 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:02.558 -07 000000438 INF: FPGA: Recv ZPIEZORD 25399
17-03-17 21:39:02.568 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:02.568 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.369 V. Piezo Error = -9.4 V.
17-03-17 21:39:02.568 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29695 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29696 (-130.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29689 (-130.3 uncal um), Max = 29700 (-130.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:39:02.568 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29695, posNoise = 5, negNoise = 6
17-03-17 21:39:02.568 -07 000000610 INF: Z Motor: After move to -0.131083, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:02.568 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:39:02.568 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:02.568 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:02.568 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:02.568 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:02.568 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:02.568 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:02.568 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:02.568 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:02.568 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:02.568 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:39:02.568 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:02.568 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:02.578 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:39:02.578 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:02.578 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:39:02.578 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:02.588 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:39:02.588 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:39:02.588 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:39:02.588 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:39:02.588 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28812 150\n [Camera]
17-03-17 21:39:02.788 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:03.228 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:03.228 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:03.228 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:03.228 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:03.228 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:39:03.228 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:03.228 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:03.228 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:03.228 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:03.228 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:39:03.418 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28812 820
17-03-17 21:39:03.568 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:03.598 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 368 ms.
17-03-17 21:39:03.598 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-17 21:39:03.598 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:03.608 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:03.608 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:39:03.608 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:39:03.608 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:03.608 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:03.608 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:39:03.608 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:39:03.778 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1181
17-03-17 21:39:03.778 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1181
17-03-17 21:39:03.908 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:39:03.908 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:39:03.908 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:03.908 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:03.918 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:03.918 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 21:39:03.918 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:03.918 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-17 21:39:03.968 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:03.968 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:03.968 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28812 150' command took 2 ms to send, 1368 ms to get response, and 1378 ms overall
17-03-17 21:39:03.978 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.131611
17-03-17 21:39:03.978 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13161 mm
17-03-17 21:39:03.978 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:03.978 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 21:39:03.978 -07 000000608 INF: Y Motor: Moving to 68.2126 mm, started at 67.3730 mm, delta = 0.8396 mm
17-03-17 21:39:03.978 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:03.978 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 28750, sync = True, waitForSettling = False)
17-03-17 21:39:03.978 -07 000000429 INF: Z Motor: Moving to -0.131609 mm, started at -0.131090 mm, distance = -0.52 um
17-03-17 21:39:03.978 -07 000000415 INF: FPGA: Recv YRDPOS 137980
17-03-17 21:39:03.988 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:39:03.988 -07 000000608 INF: Y Motor: Encoder = 137980 = motor step 107796.9 = 67.3730 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:03.988 -07 000000608 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:03.988 -07 000000608 INF: Y Motor: Moving 1343 steps-20
17-03-17 21:39:03.988 -07 000000429 INF: FPGA: Xmit ZDACW 28750\n [Z Motor]
17-03-17 21:39:03.988 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:39:03.998 -07 000000429 INF: FPGA: 'ZDACW 28750' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:39:03.998 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:04.008 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:04.008 -07 000000476 INF: FPGA: Recv ZDACR 28750
17-03-17 21:39:04.018 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-17 21:39:04.018 -07 000000429 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-17 21:39:04.298 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:39:04.298 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:39:04.298 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:39:04.298 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:04.298 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:39:04.298 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:04.298 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:04.298 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:04.298 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:39:04.308 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:39:04.368 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:39:04.368 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:39:04.408 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:04.408 -07 000000475 INF: FPGA: Recv YRDPOS 139685
17-03-17 21:39:04.418 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:39:04.418 -07 000000608 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:04.418 -07 000000608 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm)
17-03-17 21:39:04.418 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.164 mm/sec
17-03-17 21:39:05.368 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:05.368 -07 000000382 INF: FPGA: Recv YRDPOS 139686
17-03-17 21:39:05.378 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:05.378 -07 000000608 INF: Y Motor: Encoder = 139686 = motor step 109129.7 = 68.2061 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:05.398 -07 000000608 INF: Y Motor: After move to 68.212608, error = -0.006554, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:05.398 -07 000000608 INF: Y Motor: Position error after settling (table move) = -13 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:39:05.398 -07 000000608 INF: Y Motor: Moved to 68.2061 after 1416 ms (table move)
17-03-17 21:39:05.398 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131609 mm (DAC = 28750)
17-03-17 21:39:05.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.398 -07 000000459 INF: FPGA: Recv ZSGSRD 29775
17-03-17 21:39:05.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:39:05.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.408 -07 000000429 INF: FPGA: Recv ZSGSRD 29773
17-03-17 21:39:05.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.418 -07 000000501 INF: FPGA: Recv ZSGSRD 29778
17-03-17 21:39:05.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.428 -07 000000576 INF: FPGA: Recv ZSGSRD 29782
17-03-17 21:39:05.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.438 -07 000000569 INF: FPGA: Recv ZSGSRD 29775
17-03-17 21:39:05.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.448 -07 000000458 INF: FPGA: Recv ZSGSRD 29787
17-03-17 21:39:05.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:05.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.458 -07 000000415 INF: FPGA: Recv ZSGSRD 29778
17-03-17 21:39:05.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.468 -07 000000608 INF: FPGA: Recv ZSGSRD 29772
17-03-17 21:39:05.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.478 -07 000000480 INF: FPGA: Recv ZSGSRD 29771
17-03-17 21:39:05.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.488 -07 000000627 INF: FPGA: Recv ZSGSRD 29766
17-03-17 21:39:05.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.498 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:05.498 -07 000000459 INF: FPGA: Recv ZPIEZORD 25541
17-03-17 21:39:05.508 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.508 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.387 V. Piezo Error = -9.3 V.
17-03-17 21:39:05.508 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.6 um, Read 10 ADC samples: Avg = 29776 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29775 (-130.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 29766 (-130.8 uncal um), Max = 29787 (-130.9 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:39:05.508 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29776, posNoise = 11, negNoise = 10
17-03-17 21:39:05.508 -07 000000610 INF: Z Motor: After move to -0.131609, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:05.508 -07 000000610 INF: Z Motor: Settle wait time = 1418 ms, measure time = 107 ms (allowed 150 ms), total time = 1525 ms
17-03-17 21:39:05.508 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:05.558 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1577 ms
17-03-17 21:39:05.558 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:05.558 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.2060546875, Z-position -0.131610692744209. ----------
17-03-17 21:39:05.558 -07 000000610 INF: Cycle	53	Tile	11	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:05.558 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28574, sync = True, waitForSettling = True)
17-03-17 21:39:05.558 -07 000000610 INF: Z Motor: Moving to -0.130803 mm, started at -0.131611 mm, distance = 0.81 um
17-03-17 21:39:05.558 -07 000000610 INF: FPGA: Xmit ZDACW 28574\n [Z Motor]
17-03-17 21:39:05.558 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 21:39:05.568 -07 000000610 INF: FPGA: 'ZDACW 28574' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:39:05.568 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:05.568 -07 000000458 INF: FPGA: Recv ZDACR 28574
17-03-17 21:39:05.578 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.578 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:05.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.728 -07 000000382 INF: FPGA: Recv ZSGSRD 29648
17-03-17 21:39:05.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.738 -07 000000429 INF: FPGA: Recv ZSGSRD 29653
17-03-17 21:39:05.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.748 -07 000000547 INF: FPGA: Recv ZSGSRD 29653
17-03-17 21:39:05.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.758 -07 000000512 INF: FPGA: Recv ZSGSRD 29653
17-03-17 21:39:05.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.768 -07 000000458 INF: FPGA: Recv ZSGSRD 29648
17-03-17 21:39:05.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.778 -07 000000438 INF: FPGA: Recv ZSGSRD 29652
17-03-17 21:39:05.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.788 -07 000000476 INF: FPGA: Recv ZSGSRD 29647
17-03-17 21:39:05.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.808 -07 000000431 INF: FPGA: Recv ZSGSRD 29651
17-03-17 21:39:05.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:39:05.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.818 -07 000000501 INF: FPGA: Recv ZSGSRD 29655
17-03-17 21:39:05.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:05.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:05.828 -07 000000438 INF: FPGA: Recv ZSGSRD 29658
17-03-17 21:39:05.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.838 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:05.838 -07 000000429 INF: FPGA: Recv ZPIEZORD 25364
17-03-17 21:39:05.848 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:05.848 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.360 V. Piezo Error = -9.4 V.
17-03-17 21:39:05.848 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29652 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29652 (-130.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29647 (-130.0 uncal um), Max = 29658 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:39:05.848 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29652, posNoise = 6, negNoise = 5
17-03-17 21:39:05.848 -07 000000610 INF: Z Motor: After move to -0.130803, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:05.848 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-17 21:39:05.848 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:05.848 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:05.848 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:05.848 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:05.848 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:05.848 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:05.848 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:05.848 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:05.848 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:39:05.848 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:05.848 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:05.848 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:05.858 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:39:05.858 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:05.858 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:39:05.858 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:05.868 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:39:05.868 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:39:05.868 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:39:05.868 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:39:05.868 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28750 150\n [Camera]
17-03-17 21:39:06.068 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:06.118 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.990831,
17-03-17 21:39:06.508 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:06.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:06.508 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:06.508 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:06.508 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:39:06.508 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:06.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:06.508 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:06.508 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:06.508 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:39:06.698 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28750 820
17-03-17 21:39:06.848 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:06.888 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:39:06.888 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:39:06.888 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:06.888 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:39:06.888 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:39:06.888 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:06.888 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:06.888 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:39:06.888 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:06.898 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:06.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:06.898 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:39:07.058 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:07.058 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:07.058 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:07.168 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:07.168 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:07.168 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:07.178 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:07.178 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 21:39:07.178 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:07.178 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-17 21:39:07.248 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:07.248 -07 000000459 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:07.248 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28750 150' command took 2 ms to send, 1366 ms to get response, and 1378 ms overall
17-03-17 21:39:07.248 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:39:07.248 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.2060546875, Z-Position -0.130814090438631. ------
17-03-17 21:39:07.258 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:39:07.258 -07 000000569 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13745 mm
17-03-17 21:39:07.258 -07 000000569 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:07.258 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:39:07.258 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 21:39:07.258 -07 000000012 INF: Y Motor: Moving to 69.0426 mm, started at 68.2061 mm, delta = 0.8366 mm
17-03-17 21:39:07.258 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 30026, sync = True, waitForSettling = False)
17-03-17 21:39:07.258 -07 000000438 INF: Z Motor: Moving to -0.137450 mm, started at -0.130814 mm, distance = -6.64 um
17-03-17 21:39:07.268 -07 000000438 INF: FPGA: Xmit ZDACW 30026\n [Z Motor]
17-03-17 21:39:07.268 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:39:07.268 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:39:07.278 -07 000000438 INF: FPGA: 'ZDACW 30026' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:39:07.278 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:07.278 -07 000000480 INF: FPGA: Recv YRDPOS 139686
17-03-17 21:39:07.288 -07 000000458 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:39:07.288 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 21:39:07.288 -07 000000012 INF: Y Motor: Encoder = 139686 = motor step 109129.7 = 68.2061 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:07.288 -07 000000012 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:07.288 -07 000000012 INF: Y Motor: Moving 1338 steps-14
17-03-17 21:39:07.298 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:07.298 -07 000000501 INF: FPGA: Recv ZDACR 30026
17-03-17 21:39:07.308 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:07.308 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:39:07.308 -07 000000438 INF: Z Motor: MoveAbsStepped took 43 ms (did NOT wait for settling yet))
17-03-17 21:39:07.488 -07 000000626 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:39:07.488 -07 000000458 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 224 ms overall
17-03-17 21:39:07.558 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 21:39:07.558 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:39:07.558 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:07.568 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 385 ms.
17-03-17 21:39:07.568 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:39:07.568 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:07.568 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:07.568 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 508 ms.
17-03-17 21:39:07.568 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:07.578 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-17 21:39:07.678 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 21:39:07.678 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 21:39:07.718 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:07.728 -07 000000431 INF: FPGA: Recv YRDPOS 141369
17-03-17 21:39:07.728 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:39:07.728 -07 000000012 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:07.728 -07 000000012 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 21:39:07.728 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.837 mm, average velocity = 2.107 mm/sec
17-03-17 21:39:08.678 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:08.678 -07 000000476 INF: FPGA: Recv YRDPOS 141370
17-03-17 21:39:08.688 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:08.688 -07 000000012 INF: Y Motor: Encoder = 141370 = motor step 110445.3 = 69.0283 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:08.708 -07 000000012 INF: Y Motor: After move to 69.042610, error = -0.014290, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:08.708 -07 000000012 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:39:08.708 -07 000000012 INF: Y Motor: Moved to 69.0283 after 1448 ms (table move)
17-03-17 21:39:08.708 -07 000000569 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137450 mm (DAC = 30026)
17-03-17 21:39:08.708 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.718 -07 000000576 INF: FPGA: Recv ZSGSRD 30689
17-03-17 21:39:08.718 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:39:08.718 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.718 -07 000000424 INF: FPGA: Recv ZSGSRD 30685
17-03-17 21:39:08.728 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:08.728 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.728 -07 000000547 INF: FPGA: Recv ZSGSRD 30688
17-03-17 21:39:08.738 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.738 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.738 -07 000000415 INF: FPGA: Recv ZSGSRD 30687
17-03-17 21:39:08.748 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.748 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.748 -07 000000458 INF: FPGA: Recv ZSGSRD 30685
17-03-17 21:39:08.758 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.758 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.758 -07 000000627 INF: FPGA: Recv ZSGSRD 30692
17-03-17 21:39:08.768 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.768 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.768 -07 000000431 INF: FPGA: Recv ZSGSRD 30688
17-03-17 21:39:08.778 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.778 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.778 -07 000000429 INF: FPGA: Recv ZSGSRD 30679
17-03-17 21:39:08.788 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.788 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.788 -07 000000415 INF: FPGA: Recv ZSGSRD 30684
17-03-17 21:39:08.798 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.798 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:08.798 -07 000000512 INF: FPGA: Recv ZSGSRD 30683
17-03-17 21:39:08.808 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.808 -07 000000569 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:08.808 -07 000000608 INF: FPGA: Recv ZPIEZORD 26765
17-03-17 21:39:08.818 -07 000000569 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:08.818 -07 000000569 INF: Z Motor: Piezo is near 37.2 V (nominally 0 to 100 V), expect near 45.8 V, since DAC is at 4.582 V. Piezo Error = -8.6 V.
17-03-17 21:39:08.818 -07 000000569 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.5 um, Read 10 ADC samples: Avg = 30686 (-136.7 uncal um), Error = 0.8 uncal um, Median = 30686 (-136.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30679 (-136.6 uncal um), Max = 30692 (-136.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:39:08.818 -07 000000569 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30686, posNoise = 6, negNoise = 7
17-03-17 21:39:08.818 -07 000000569 INF: Z Motor: After move to -0.137450, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:08.818 -07 000000569 INF: Z Motor: Settle wait time = 1451 ms, measure time = 102 ms (allowed 150 ms), total time = 1553 ms
17-03-17 21:39:08.818 -07 000000569 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:08.868 -07 000000569 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1606 ms
17-03-17 21:39:08.868 -07 000000569 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:08.868 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:08.868 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:08.868 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:08.868 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:08.868 -07 000000415 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:39:08.868 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:08.868 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:08.868 -07 000000415 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:39:08.878 -07 000000415 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:39:08.878 -07 000000415 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:39:08.878 -07 000000415 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 21:39:08.878 -07 000000415 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 11 ms.
17-03-17 21:39:08.888 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:39:08.928 -07 000000415 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:39:09.128 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:39:09.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:39:09.128 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:39:09.128 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) start.
17-03-17 21:39:09.168 -07 000000415 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:39:09.168 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 21:39:09.168 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 2 ms to send, 276 ms to get response, and 284 ms overall
17-03-17 21:39:09.248 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) end. Duration was 117 ms.
17-03-17 21:39:09.248 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:09.248 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:39:09.248 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 120 ms.
17-03-17 21:39:09.268 -07 000000382 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:39:09.268 -07 000000012 INF: Autofocus start
17-03-17 21:39:09.268 -07 000000012 INF: MeasureProfile start
17-03-17 21:39:09.268 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:39:09.278 -07 000000382 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:39:09.278 -07 000000382 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:39:09.278 -07 000000012 INF: MeasureProfile done
17-03-17 21:39:09.278 -07 000000012 INF: X=16  Z correction [um]=0.0530179
17-03-17 21:39:09.278 -07 000000012 INF: Autofocus finished
17-03-17 21:39:09.478 -07 000000459 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:39:09.478 -07 000000382 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:39:09.478 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.0283203125, Z-position -0.137456725793212. ----------
17-03-17 21:39:09.478 -07 000000610 INF: Cycle	53	Tile	12	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:09.488 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28550, sync = True, waitForSettling = True)
17-03-17 21:39:09.488 -07 000000610 INF: Z Motor: Moving to -0.130694 mm, started at -0.137457 mm, distance = 6.76 um
17-03-17 21:39:09.488 -07 000000610 INF: FPGA: Xmit ZDACW 28550\n [Z Motor]
17-03-17 21:39:09.488 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 21:39:09.498 -07 000000610 INF: FPGA: 'ZDACW 28550' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.498 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:09.498 -07 000000547 INF: FPGA: Recv ZDACR 28550
17-03-17 21:39:09.508 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.508 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:09.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.658 -07 000000012 INF: FPGA: Recv ZSGSRD 29633
17-03-17 21:39:09.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:09.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.668 -07 000000627 INF: FPGA: Recv ZSGSRD 29634
17-03-17 21:39:09.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.678 -07 000000480 INF: FPGA: Recv ZSGSRD 29636
17-03-17 21:39:09.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.688 -07 000000576 INF: FPGA: Recv ZSGSRD 29634
17-03-17 21:39:09.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.698 -07 000000382 INF: FPGA: Recv ZSGSRD 29632
17-03-17 21:39:09.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.708 -07 000000459 INF: FPGA: Recv ZSGSRD 29634
17-03-17 21:39:09.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.718 -07 000000569 INF: FPGA: Recv ZSGSRD 29631
17-03-17 21:39:09.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.728 -07 000000626 INF: FPGA: Recv ZSGSRD 29632
17-03-17 21:39:09.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.738 -07 000000429 INF: FPGA: Recv ZSGSRD 29634
17-03-17 21:39:09.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:09.748 -07 000000475 INF: FPGA: Recv ZSGSRD 29644
17-03-17 21:39:09.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.758 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:09.758 -07 000000547 INF: FPGA: Recv ZPIEZORD 25364
17-03-17 21:39:09.768 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:09.768 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.4 V.
17-03-17 21:39:09.768 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29634 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29634 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29631 (-129.9 uncal um), Max = 29644 (-130.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:39:09.768 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29634, posNoise = 10, negNoise = 3
17-03-17 21:39:09.768 -07 000000610 INF: Z Motor: After move to -0.130694, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:09.768 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 21:39:09.768 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:09.768 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:09.768 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:09.768 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:09.768 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:09.768 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:09.768 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:09.768 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:09.768 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:09.768 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:09.768 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:39:09.768 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:09.778 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:39:09.778 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:09.778 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:39:09.778 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:09.778 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:39:09.778 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:39:09.788 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 21:39:09.788 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 21:39:09.788 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28726 150\n [Camera]
17-03-17 21:39:09.988 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-17 21:39:10.428 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:10.428 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:10.428 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:10.428 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:10.428 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:39:10.428 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:10.428 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:10.428 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:10.428 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:10.428 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:39:10.618 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28726 820
17-03-17 21:39:10.768 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:10.798 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:39:10.798 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:39:10.798 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:10.808 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:39:10.808 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:39:10.808 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:10.808 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:10.808 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:39:10.808 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:10.818 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:39:10.978 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:10.988 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:10.988 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:10.988 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:10.988 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:10.988 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:10.988 -07 000000459 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:10.988 -07 000000459 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:10.988 -07 000000459 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:39:10.988 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:39:11.268 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:39:11.268 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:11.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28726 150' command took 2 ms to send, 1473 ms to get response, and 1477 ms overall
17-03-17 21:39:11.268 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.131107
17-03-17 21:39:11.268 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13111 mm
17-03-17 21:39:11.268 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:11.268 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 21:39:11.268 -07 000000576 INF: Y Motor: Moving to 69.8726 mm, started at 69.0283 mm, delta = 0.8443 mm
17-03-17 21:39:11.268 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:11.268 -07 000000415 INF: Z Motor: Entering MoveAbsStepped (DAC = 28640, sync = True, waitForSettling = False)
17-03-17 21:39:11.268 -07 000000415 INF: Z Motor: Moving to -0.131106 mm, started at -0.130698 mm, distance = -0.41 um
17-03-17 21:39:11.278 -07 000000415 INF: FPGA: Xmit ZDACW 28640\n [Z Motor]
17-03-17 21:39:11.278 -07 000000458 INF: FPGA: Recv YRDPOS 141370
17-03-17 21:39:11.278 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:39:11.278 -07 000000576 INF: Y Motor: Encoder = 141370 = motor step 110445.3 = 69.0283 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:11.278 -07 000000576 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:11.278 -07 000000576 INF: Y Motor: Moving 1351 steps-30
17-03-17 21:39:11.278 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 21:39:11.288 -07 000000415 INF: FPGA: 'ZDACW 28640' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:11.288 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:11.298 -07 000000415 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:11.298 -07 000000626 INF: FPGA: Recv ZDACR 28640
17-03-17 21:39:11.308 -07 000000415 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:39:11.308 -07 000000415 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-17 21:39:11.368 -07 000000459 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:39:11.368 -07 000000459 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 21:39:11.368 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:11.368 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:39:11.368 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:39:11.368 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:11.368 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:11.378 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 21:39:11.378 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:39:11.378 -07 000000459 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:39:11.578 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.015368,
17-03-17 21:39:11.668 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:39:11.668 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 388 ms overall
17-03-17 21:39:11.698 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:11.698 -07 000000627 INF: FPGA: Recv YRDPOS 143082
17-03-17 21:39:11.708 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:39:11.708 -07 000000576 INF: Y Motor: Encoder = 143082 = motor step 111782.8 = 69.8643 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:11.708 -07 000000576 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:39:11.708 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.176 mm/sec
17-03-17 21:39:11.898 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:11.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:12.658 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:12.658 -07 000000480 INF: FPGA: Recv YRDPOS 143082
17-03-17 21:39:12.668 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.668 -07 000000576 INF: Y Motor: Encoder = 143082 = motor step 111782.8 = 69.8643 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:12.688 -07 000000576 INF: Y Motor: After move to 69.872612, error = -0.008354, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:12.688 -07 000000576 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:12.688 -07 000000576 INF: Y Motor: Moved to 69.8643 after 1416 ms (table move)
17-03-17 21:39:12.688 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131106 mm (DAC = 28640)
17-03-17 21:39:12.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.698 -07 000000512 INF: FPGA: Recv ZSGSRD 29694
17-03-17 21:39:12.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:12.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.698 -07 000000415 INF: FPGA: Recv ZSGSRD 29709
17-03-17 21:39:12.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.708 -07 000000431 INF: FPGA: Recv ZSGSRD 29701
17-03-17 21:39:12.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.718 -07 000000480 INF: FPGA: Recv ZSGSRD 29694
17-03-17 21:39:12.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.728 -07 000000429 INF: FPGA: Recv ZSGSRD 29695
17-03-17 21:39:12.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.738 -07 000000438 INF: FPGA: Recv ZSGSRD 29691
17-03-17 21:39:12.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.748 -07 000000459 INF: FPGA: Recv ZSGSRD 29698
17-03-17 21:39:12.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.758 -07 000000458 INF: FPGA: Recv ZSGSRD 29690
17-03-17 21:39:12.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.768 -07 000000547 INF: FPGA: Recv ZSGSRD 29705
17-03-17 21:39:12.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:12.778 -07 000000012 INF: FPGA: Recv ZSGSRD 29705
17-03-17 21:39:12.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.788 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:12.788 -07 000000424 INF: FPGA: Recv ZPIEZORD 25416
17-03-17 21:39:12.798 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.798 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.370 V. Piezo Error = -9.4 V.
17-03-17 21:39:12.798 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29698 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29696 (-130.3 uncal um), StdDev = 7 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 29690 (-130.3 uncal um), Max = 29709 (-130.4 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:39:12.798 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29698, posNoise = 11, negNoise = 8
17-03-17 21:39:12.798 -07 000000610 INF: Z Motor: After move to -0.131106, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:12.798 -07 000000610 INF: Z Motor: Settle wait time = 1418 ms, measure time = 103 ms (allowed 150 ms), total time = 1521 ms
17-03-17 21:39:12.798 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:12.848 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms
17-03-17 21:39:12.848 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:12.848 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.8642578125, Z-position -0.131109604197152. ----------
17-03-17 21:39:12.848 -07 000000610 INF: Cycle	53	Tile	13	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:12.848 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28464, sync = True, waitForSettling = True)
17-03-17 21:39:12.848 -07 000000610 INF: Z Motor: Moving to -0.130300 mm, started at -0.131110 mm, distance = 0.81 um
17-03-17 21:39:12.848 -07 000000610 INF: FPGA: Xmit ZDACW 28464\n [Z Motor]
17-03-17 21:39:12.848 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:39:12.858 -07 000000610 INF: FPGA: 'ZDACW 28464' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:39:12.858 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:12.858 -07 000000512 INF: FPGA: Recv ZDACR 28464
17-03-17 21:39:12.868 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:12.868 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:13.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.018 -07 000000547 INF: FPGA: Recv ZSGSRD 29574
17-03-17 21:39:13.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:13.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.028 -07 000000415 INF: FPGA: Recv ZSGSRD 29576
17-03-17 21:39:13.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.038 -07 000000382 INF: FPGA: Recv ZSGSRD 29572
17-03-17 21:39:13.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.048 -07 000000608 INF: FPGA: Recv ZSGSRD 29566
17-03-17 21:39:13.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.058 -07 000000627 INF: FPGA: Recv ZSGSRD 29573
17-03-17 21:39:13.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.068 -07 000000569 INF: FPGA: Recv ZSGSRD 29567
17-03-17 21:39:13.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.078 -07 000000459 INF: FPGA: Recv ZSGSRD 29572
17-03-17 21:39:13.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.088 -07 000000458 INF: FPGA: Recv ZSGSRD 29566
17-03-17 21:39:13.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.098 -07 000000424 INF: FPGA: Recv ZSGSRD 29576
17-03-17 21:39:13.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:13.108 -07 000000627 INF: FPGA: Recv ZSGSRD 29571
17-03-17 21:39:13.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.118 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:13.118 -07 000000475 INF: FPGA: Recv ZPIEZORD 25278
17-03-17 21:39:13.128 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:13.128 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.343 V. Piezo Error = -9.4 V.
17-03-17 21:39:13.128 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29571 (-129.5 uncal um), Error = 0.8 uncal um, Median = 29572 (-129.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29566 (-129.5 uncal um), Max = 29576 (-129.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:39:13.128 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29571, posNoise = 5, negNoise = 5
17-03-17 21:39:13.128 -07 000000610 INF: Z Motor: After move to -0.130300, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:13.128 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:39:13.128 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:13.128 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:13.128 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:13.128 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:13.128 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:13.128 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:13.128 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:13.128 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:13.128 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:39:13.128 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:13.128 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:13.128 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:13.128 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:39:13.128 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:13.138 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:39:13.138 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:13.148 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:39:13.148 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:39:13.148 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:39:13.148 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:39:13.148 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28640 150\n [Camera]
17-03-17 21:39:13.348 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:13.788 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 628
17-03-17 21:39:13.788 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 628
17-03-17 21:39:13.788 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:13.788 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 628
17-03-17 21:39:13.788 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 628
17-03-17 21:39:13.788 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:13.798 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:13.798 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:39:13.798 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:13.798 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:39:13.978 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28640 820
17-03-17 21:39:14.128 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:14.168 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-17 21:39:14.168 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 21:39:14.168 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:14.168 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:39:14.168 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-17 21:39:14.168 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:14.168 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:14.168 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:14.168 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:39:14.178 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:39:14.338 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:14.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:14.338 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:14.338 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:14.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:14.338 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:14.338 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:14.338 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:39:14.348 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:14.348 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:39:14.528 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:14.528 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:14.528 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28640 150' command took 2 ms to send, 1374 ms to get response, and 1378 ms overall
17-03-17 21:39:14.528 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.130669
17-03-17 21:39:14.528 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13067 mm
17-03-17 21:39:14.528 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:14.528 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 21:39:14.528 -07 000000429 INF: Y Motor: Moving to 70.7026 mm, started at 69.8643 mm, delta = 0.8383 mm
17-03-17 21:39:14.528 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28545, sync = True, waitForSettling = False)
17-03-17 21:39:14.528 -07 000000576 INF: Z Motor: Moving to -0.130671 mm, started at -0.130294 mm, distance = -0.38 um
17-03-17 21:39:14.538 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:14.538 -07 000000458 INF: FPGA: Recv YRDPOS 143082
17-03-17 21:39:14.548 -07 000000576 INF: FPGA: Xmit ZDACW 28545\n [Z Motor]
17-03-17 21:39:14.548 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:14.548 -07 000000429 INF: Y Motor: Encoder = 143082 = motor step 111782.8 = 69.8643 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:14.548 -07 000000429 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:14.548 -07 000000429 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:39:14.548 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:39:14.558 -07 000000576 INF: FPGA: 'ZDACW 28545' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-17 21:39:14.558 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:14.558 -07 000000476 INF: FPGA: Recv ZDACR 28545
17-03-17 21:39:14.568 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:14.568 -07 000000576 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 21:39:14.568 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:14.728 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:39:14.728 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:39:14.728 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:14.738 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 393 ms.
17-03-17 21:39:14.738 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:39:14.738 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:14.738 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:14.738 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:14.738 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 21:39:14.748 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:39:14.938 -07 000000438 INF: FPGA: Recv YMVTILE
17-03-17 21:39:14.938 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 369 ms to get response, and 398 ms overall
17-03-17 21:39:14.988 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:14.988 -07 000000627 INF: FPGA: Recv YRDPOS 144772
17-03-17 21:39:14.998 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:39:14.998 -07 000000429 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:14.998 -07 000000429 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:39:14.998 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.106 mm/sec
17-03-17 21:39:15.948 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:15.948 -07 000000459 INF: FPGA: Recv YRDPOS 144772
17-03-17 21:39:15.958 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:15.958 -07 000000429 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:15.978 -07 000000429 INF: Y Motor: After move to 70.702606, error = -0.013153, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:15.978 -07 000000429 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:15.978 -07 000000429 INF: Y Motor: Moved to 70.6895 after 1445 ms (table move)
17-03-17 21:39:15.978 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130671 mm (DAC = 28545)
17-03-17 21:39:15.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:15.988 -07 000000012 INF: FPGA: Recv ZSGSRD 29631
17-03-17 21:39:15.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:15.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:15.988 -07 000000429 INF: FPGA: Recv ZSGSRD 29631
17-03-17 21:39:15.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:15.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:15.998 -07 000000476 INF: FPGA: Recv ZSGSRD 29634
17-03-17 21:39:16.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.008 -07 000000475 INF: FPGA: Recv ZSGSRD 29636
17-03-17 21:39:16.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.018 -07 000000626 INF: FPGA: Recv ZSGSRD 29629
17-03-17 21:39:16.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.028 -07 000000576 INF: FPGA: Recv ZSGSRD 29630
17-03-17 21:39:16.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.038 -07 000000458 INF: FPGA: Recv ZSGSRD 29624
17-03-17 21:39:16.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.048 -07 000000431 INF: FPGA: Recv ZSGSRD 29632
17-03-17 21:39:16.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.058 -07 000000569 INF: FPGA: Recv ZSGSRD 29633
17-03-17 21:39:16.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.068 -07 000000459 INF: FPGA: Recv ZSGSRD 29629
17-03-17 21:39:16.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.078 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:16.078 -07 000000382 INF: FPGA: Recv ZPIEZORD 25427
17-03-17 21:39:16.088 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.088 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.2 V.
17-03-17 21:39:16.088 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29631 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29631 (-129.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29624 (-129.9 uncal um), Max = 29636 (-129.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:39:16.088 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29631, posNoise = 5, negNoise = 7
17-03-17 21:39:16.088 -07 000000610 INF: Z Motor: After move to -0.130671, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:16.088 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 103 ms (allowed 150 ms), total time = 1550 ms
17-03-17 21:39:16.088 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:16.138 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-17 21:39:16.138 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:16.138 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.689453125, Z-position -0.130679181983654. ----------
17-03-17 21:39:16.138 -07 000000610 INF: Cycle	53	Tile	14	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:16.138 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28368, sync = True, waitForSettling = True)
17-03-17 21:39:16.138 -07 000000610 INF: Z Motor: Moving to -0.129860 mm, started at -0.130679 mm, distance = 0.82 um
17-03-17 21:39:16.138 -07 000000610 INF: FPGA: Xmit ZDACW 28368\n [Z Motor]
17-03-17 21:39:16.138 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:39:16.148 -07 000000610 INF: FPGA: 'ZDACW 28368' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:39:16.148 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:16.148 -07 000000382 INF: FPGA: Recv ZDACR 28368
17-03-17 21:39:16.158 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.158 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:16.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.308 -07 000000480 INF: FPGA: Recv ZSGSRD 29508
17-03-17 21:39:16.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:16.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.318 -07 000000012 INF: FPGA: Recv ZSGSRD 29506
17-03-17 21:39:16.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.328 -07 000000458 INF: FPGA: Recv ZSGSRD 29501
17-03-17 21:39:16.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.338 -07 000000012 INF: FPGA: Recv ZSGSRD 29506
17-03-17 21:39:16.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.348 -07 000000458 INF: FPGA: Recv ZSGSRD 29507
17-03-17 21:39:16.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.358 -07 000000012 INF: FPGA: Recv ZSGSRD 29501
17-03-17 21:39:16.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.368 -07 000000626 INF: FPGA: Recv ZSGSRD 29506
17-03-17 21:39:16.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:16.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.378 -07 000000424 INF: FPGA: Recv ZSGSRD 29509
17-03-17 21:39:16.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.388 -07 000000627 INF: FPGA: Recv ZSGSRD 29504
17-03-17 21:39:16.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:16.398 -07 000000547 INF: FPGA: Recv ZSGSRD 29500
17-03-17 21:39:16.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.408 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:16.408 -07 000000480 INF: FPGA: Recv ZPIEZORD 25226
17-03-17 21:39:16.418 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:16.418 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.329 V. Piezo Error = -9.4 V.
17-03-17 21:39:16.418 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.9 um, Read 10 ADC samples: Avg = 29505 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29506 (-129.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29500 (-129.1 uncal um), Max = 29509 (-129.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:39:16.418 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29505, posNoise = 4, negNoise = 5
17-03-17 21:39:16.418 -07 000000610 INF: Z Motor: After move to -0.129860, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:16.418 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:39:16.418 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:16.418 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:16.418 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:16.418 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:16.418 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:16.418 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:16.418 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:16.418 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:16.418 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:39:16.418 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:16.418 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:16.418 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:16.428 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:39:16.428 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:16.428 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:39:16.428 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:16.428 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:39:16.428 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:39:16.438 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:39:16.438 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:39:16.438 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28545 150\n [Camera]
17-03-17 21:39:16.638 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:16.898 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:16.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:16.948 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.012614,
17-03-17 21:39:17.068 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:17.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:17.068 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:17.068 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:17.068 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:39:17.078 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:17.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:17.078 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:17.078 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:17.078 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 21:39:17.268 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28545 820
17-03-17 21:39:17.418 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:17.448 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:39:17.448 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:39:17.448 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:17.448 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:39:17.448 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:39:17.448 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:17.458 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:17.458 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:39:17.458 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:39:17.458 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:39:17.628 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:17.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:17.628 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:17.628 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:17.628 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:39:17.628 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:17.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:17.628 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:17.628 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:17.628 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:39:17.818 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:17.818 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:17.818 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28545 150' command took 2 ms to send, 1372 ms to get response, and 1378 ms overall
17-03-17 21:39:17.818 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.130082
17-03-17 21:39:17.818 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13008 mm
17-03-17 21:39:17.818 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:17.818 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 21:39:17.818 -07 000000012 INF: Y Motor: Moving to 71.5326 mm, started at 70.6895 mm, delta = 0.8432 mm
17-03-17 21:39:17.818 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:17.818 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 28416, sync = True, waitForSettling = False)
17-03-17 21:39:17.818 -07 000000438 INF: Z Motor: Moving to -0.130080 mm, started at -0.129870 mm, distance = -0.21 um
17-03-17 21:39:17.828 -07 000000438 INF: FPGA: Xmit ZDACW 28416\n [Z Motor]
17-03-17 21:39:17.828 -07 000000475 INF: FPGA: Recv YRDPOS 144772
17-03-17 21:39:17.828 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:17.828 -07 000000012 INF: Y Motor: Encoder = 144772 = motor step 113103.1 = 70.6895 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:17.828 -07 000000012 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:17.828 -07 000000012 INF: Y Motor: Moving 1349 steps-27
17-03-17 21:39:17.828 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:39:17.838 -07 000000438 INF: FPGA: 'ZDACW 28416' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:39:17.838 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:17.848 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:17.848 -07 000000429 INF: FPGA: Recv ZDACR 28416
17-03-17 21:39:17.858 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:39:17.858 -07 000000438 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-17 21:39:18.008 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:39:18.008 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:39:18.008 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:18.018 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 385 ms.
17-03-17 21:39:18.018 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:39:18.018 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:18.018 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:18.018 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:39:18.018 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:18.028 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:39:18.208 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 21:39:18.208 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:39:18.248 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:18.248 -07 000000476 INF: FPGA: Recv YRDPOS 146472
17-03-17 21:39:18.258 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:39:18.258 -07 000000012 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:18.258 -07 000000012 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:39:18.258 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.843 mm, average velocity = 2.179 mm/sec
17-03-17 21:39:19.208 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:19.208 -07 000000627 INF: FPGA: Recv YRDPOS 146472
17-03-17 21:39:19.218 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.218 -07 000000012 INF: Y Motor: Encoder = 146472 = motor step 114431.3 = 71.5195 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:19.238 -07 000000012 INF: Y Motor: After move to 71.532608, error = -0.013077, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:19.238 -07 000000012 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:19.238 -07 000000012 INF: Y Motor: Moved to 71.5195 after 1418 ms (table move)
17-03-17 21:39:19.238 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130080 mm (DAC = 28416)
17-03-17 21:39:19.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.248 -07 000000475 INF: FPGA: Recv ZSGSRD 29538
17-03-17 21:39:19.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:39:19.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.248 -07 000000429 INF: FPGA: Recv ZSGSRD 29543
17-03-17 21:39:19.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:19.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.258 -07 000000424 INF: FPGA: Recv ZSGSRD 29531
17-03-17 21:39:19.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.268 -07 000000512 INF: FPGA: Recv ZSGSRD 29534
17-03-17 21:39:19.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.278 -07 000000626 INF: FPGA: Recv ZSGSRD 29546
17-03-17 21:39:19.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.288 -07 000000501 INF: FPGA: Recv ZSGSRD 29545
17-03-17 21:39:19.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.298 -07 000000480 INF: FPGA: Recv ZSGSRD 29539
17-03-17 21:39:19.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.308 -07 000000458 INF: FPGA: Recv ZSGSRD 29534
17-03-17 21:39:19.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.318 -07 000000475 INF: FPGA: Recv ZSGSRD 29533
17-03-17 21:39:19.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.328 -07 000000627 INF: FPGA: Recv ZSGSRD 29539
17-03-17 21:39:19.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.338 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:19.338 -07 000000012 INF: FPGA: Recv ZPIEZORD 25292
17-03-17 21:39:19.348 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.348 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.336 V. Piezo Error = -9.3 V.
17-03-17 21:39:19.348 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29538 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29538 (-129.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29531 (-129.3 uncal um), Max = 29546 (-129.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:39:19.348 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29538, posNoise = 8, negNoise = 7
17-03-17 21:39:19.348 -07 000000610 INF: Z Motor: After move to -0.130080, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:19.348 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 103 ms (allowed 150 ms), total time = 1522 ms
17-03-17 21:39:19.348 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:19.398 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms
17-03-17 21:39:19.398 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:19.398 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51953125, Z-position -0.13008173025447. ----------
17-03-17 21:39:19.398 -07 000000610 INF: Cycle	53	Tile	15	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:19.398 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28240, sync = True, waitForSettling = True)
17-03-17 21:39:19.398 -07 000000610 INF: Z Motor: Moving to -0.129274 mm, started at -0.130082 mm, distance = 0.81 um
17-03-17 21:39:19.398 -07 000000610 INF: FPGA: Xmit ZDACW 28240\n [Z Motor]
17-03-17 21:39:19.398 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:39:19.408 -07 000000610 INF: FPGA: 'ZDACW 28240' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:39:19.408 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:19.408 -07 000000501 INF: FPGA: Recv ZDACR 28240
17-03-17 21:39:19.418 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.418 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:19.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.568 -07 000000576 INF: FPGA: Recv ZSGSRD 29412
17-03-17 21:39:19.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:19.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.578 -07 000000458 INF: FPGA: Recv ZSGSRD 29414
17-03-17 21:39:19.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.588 -07 000000480 INF: FPGA: Recv ZSGSRD 29415
17-03-17 21:39:19.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.598 -07 000000608 INF: FPGA: Recv ZSGSRD 29416
17-03-17 21:39:19.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.608 -07 000000501 INF: FPGA: Recv ZSGSRD 29418
17-03-17 21:39:19.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.618 -07 000000459 INF: FPGA: Recv ZSGSRD 29415
17-03-17 21:39:19.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.628 -07 000000626 INF: FPGA: Recv ZSGSRD 29414
17-03-17 21:39:19.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:19.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.638 -07 000000415 INF: FPGA: Recv ZSGSRD 29412
17-03-17 21:39:19.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.648 -07 000000480 INF: FPGA: Recv ZSGSRD 29407
17-03-17 21:39:19.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:19.658 -07 000000458 INF: FPGA: Recv ZSGSRD 29408
17-03-17 21:39:19.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.668 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:19.668 -07 000000475 INF: FPGA: Recv ZPIEZORD 25140
17-03-17 21:39:19.678 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:19.678 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.309 V. Piezo Error = -9.4 V.
17-03-17 21:39:19.678 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29413 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29414 (-128.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29407 (-128.5 uncal um), Max = 29418 (-128.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:39:19.678 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29413, posNoise = 5, negNoise = 6
17-03-17 21:39:19.678 -07 000000610 INF: Z Motor: After move to -0.129274, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:19.678 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:39:19.678 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:19.678 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:19.678 -07 000000415 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:19.678 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:19.678 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:19.678 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:19.678 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:19.678 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:19.678 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:39:19.678 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:19.678 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:19.678 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:19.678 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:39:19.678 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:19.688 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:39:19.688 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:19.698 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:39:19.698 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:39:19.698 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:39:19.698 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:39:19.698 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28416 150\n [Camera]
17-03-17 21:39:19.898 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:20.338 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:20.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:20.338 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:20.338 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:20.338 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 21:39:20.338 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:20.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:20.338 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:20.338 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:20.338 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 21:39:20.528 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28416 820
17-03-17 21:39:20.678 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:20.718 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:39:20.718 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:39:20.718 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:20.718 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:39:20.718 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:39:20.718 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:20.718 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:20.718 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:39:20.718 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:20.728 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:39:20.888 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:20.888 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:20.888 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:21.018 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:21.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:21.018 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:21.028 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:21.028 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 21:39:21.028 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:21.028 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:39:21.078 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:21.078 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:21.078 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28416 150' command took 2 ms to send, 1376 ms to get response, and 1378 ms overall
17-03-17 21:39:21.078 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:39:21.078 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51953125, Z-Position -0.12927870373675. ------
17-03-17 21:39:21.088 -07 000000415 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13554 mm
17-03-17 21:39:21.088 -07 000000415 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:21.088 -07 000000382 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:39:21.088 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 21:39:21.088 -07 000000576 INF: Y Motor: Moving to 72.3626 mm, started at 71.5195 mm, delta = 0.8431 mm
17-03-17 21:39:21.088 -07 000000458 INF: Z Motor: Entering MoveAbsStepped (DAC = 29610, sync = True, waitForSettling = False)
17-03-17 21:39:21.088 -07 000000458 INF: Z Motor: Moving to -0.135546 mm, started at -0.129279 mm, distance = -6.27 um
17-03-17 21:39:21.088 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:39:21.098 -07 000000382 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:39:21.098 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:21.098 -07 000000569 INF: FPGA: Recv YRDPOS 146473
17-03-17 21:39:21.108 -07 000000458 INF: FPGA: Xmit ZDACW 29610\n [Z Motor]
17-03-17 21:39:21.108 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:39:21.108 -07 000000576 INF: Y Motor: Encoder = 146473 = motor step 114432.0 = 71.5200 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:21.108 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:39:21.108 -07 000000576 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:21.108 -07 000000576 INF: Y Motor: Moving 1348 steps-27
17-03-17 21:39:21.118 -07 000000458 INF: FPGA: 'ZDACW 29610' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-17 21:39:21.118 -07 000000382 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:39:21.128 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:21.138 -07 000000458 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:21.138 -07 000000431 INF: FPGA: Recv ZDACR 29610
17-03-17 21:39:21.148 -07 000000458 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:39:21.148 -07 000000458 INF: Z Motor: MoveAbsStepped took 54 ms (did NOT wait for settling yet))
17-03-17 21:39:21.318 -07 000000012 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:39:21.318 -07 000000382 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 21:39:21.398 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:39:21.398 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:39:21.398 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:21.398 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:39:21.398 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:39:21.398 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:21.408 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:21.408 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:21.408 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 517 ms.
17-03-17 21:39:21.418 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:39:21.498 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 21:39:21.498 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 390 ms overall
17-03-17 21:39:21.538 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:21.548 -07 000000424 INF: FPGA: Recv YRDPOS 148173
17-03-17 21:39:21.548 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:21.548 -07 000000576 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:21.548 -07 000000576 INF: Y Motor: Position error before settling (table move) = -26 encoder counts (-0.013 mm)
17-03-17 21:39:21.548 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 391 ms, distance = 0.843 mm, average velocity = 2.156 mm/sec
17-03-17 21:39:21.898 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:21.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:22.318 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 4.004458,
17-03-17 21:39:22.498 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:22.498 -07 000000429 INF: FPGA: Recv YRDPOS 148173
17-03-17 21:39:22.508 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:22.508 -07 000000576 INF: Y Motor: Encoder = 148173 = motor step 115760.2 = 72.3501 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:22.528 -07 000000576 INF: Y Motor: After move to 72.362610, error = -0.012512, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:22.528 -07 000000576 INF: Y Motor: Position error after settling (table move) = -26 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:22.528 -07 000000576 INF: Y Motor: Moved to 72.3501 after 1440 ms (table move)
17-03-17 21:39:22.528 -07 000000415 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135546 mm (DAC = 29610)
17-03-17 21:39:22.528 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.538 -07 000000512 INF: FPGA: Recv ZSGSRD 30390
17-03-17 21:39:22.538 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:39:22.538 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.538 -07 000000476 INF: FPGA: Recv ZSGSRD 30381
17-03-17 21:39:22.548 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:22.548 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.548 -07 000000424 INF: FPGA: Recv ZSGSRD 30386
17-03-17 21:39:22.558 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.558 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.558 -07 000000626 INF: FPGA: Recv ZSGSRD 30388
17-03-17 21:39:22.568 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.568 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.568 -07 000000012 INF: FPGA: Recv ZSGSRD 30389
17-03-17 21:39:22.578 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.578 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.578 -07 000000459 INF: FPGA: Recv ZSGSRD 30395
17-03-17 21:39:22.588 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.588 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.588 -07 000000476 INF: FPGA: Recv ZSGSRD 30391
17-03-17 21:39:22.598 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.598 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.598 -07 000000382 INF: FPGA: Recv ZSGSRD 30391
17-03-17 21:39:22.608 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.608 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.608 -07 000000431 INF: FPGA: Recv ZSGSRD 30391
17-03-17 21:39:22.618 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.618 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:22.618 -07 000000438 INF: FPGA: Recv ZSGSRD 30384
17-03-17 21:39:22.628 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.628 -07 000000415 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:22.628 -07 000000459 INF: FPGA: Recv ZPIEZORD 26437
17-03-17 21:39:22.638 -07 000000415 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:22.638 -07 000000415 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.518 V. Piezo Error = -8.7 V.
17-03-17 21:39:22.638 -07 000000415 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.5 um, Read 10 ADC samples: Avg = 30389 (-134.8 uncal um), Error = 0.8 uncal um, Median = 30390 (-134.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30381 (-134.7 uncal um), Max = 30395 (-134.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:39:22.638 -07 000000415 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30389, posNoise = 6, negNoise = 8
17-03-17 21:39:22.638 -07 000000415 INF: Z Motor: After move to -0.135546, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:22.638 -07 000000415 INF: Z Motor: Settle wait time = 1442 ms, measure time = 103 ms (allowed 150 ms), total time = 1545 ms
17-03-17 21:39:22.638 -07 000000415 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:22.688 -07 000000415 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-17 21:39:22.688 -07 000000415 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:22.688 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:22.688 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:22.688 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:22.688 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:22.688 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:39:22.688 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:22.688 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:22.688 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:39:22.698 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 21:39:22.698 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:39:22.708 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 21:39:22.708 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 21:39:22.708 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:39:22.748 -07 000000512 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:39:22.948 -07 000000438 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:39:22.948 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:39:22.948 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:39:22.958 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2182910056, 0x0, 559484976) start.
17-03-17 21:39:22.988 -07 000000547 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:39:22.988 -07 000000415 INF: FPGA: Recv CAMSNAP
17-03-17 21:39:22.988 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 285 ms overall
17-03-17 21:39:23.068 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2182910056, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 21:39:23.068 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:23.068 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:39:23.068 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-17 21:39:23.088 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:39:23.088 -07 000000608 INF: Autofocus start
17-03-17 21:39:23.088 -07 000000608 INF: MeasureProfile start
17-03-17 21:39:23.088 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:39:23.098 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:39:23.098 -07 000000438 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:39:23.098 -07 000000608 INF: MeasureProfile done
17-03-17 21:39:23.098 -07 000000608 INF: X=16  Z correction [um]=0.0530179
17-03-17 21:39:23.098 -07 000000608 INF: Autofocus finished
17-03-17 21:39:23.298 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:39:23.298 -07 000000438 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:39:23.298 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.35009765625, Z-position -0.135548734787109. ----------
17-03-17 21:39:23.298 -07 000000610 INF: Cycle	53	Tile	16	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:23.308 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28134, sync = True, waitForSettling = True)
17-03-17 21:39:23.308 -07 000000610 INF: Z Motor: Moving to -0.128789 mm, started at -0.135549 mm, distance = 6.76 um
17-03-17 21:39:23.308 -07 000000610 INF: FPGA: Xmit ZDACW 28134\n [Z Motor]
17-03-17 21:39:23.308 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:39:23.318 -07 000000610 INF: FPGA: 'ZDACW 28134' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:39:23.318 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:23.318 -07 000000012 INF: FPGA: Recv ZDACR 28134
17-03-17 21:39:23.328 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.328 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:23.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.478 -07 000000459 INF: FPGA: Recv ZSGSRD 29337
17-03-17 21:39:23.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.488 -07 000000608 INF: FPGA: Recv ZSGSRD 29341
17-03-17 21:39:23.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.498 -07 000000438 INF: FPGA: Recv ZSGSRD 29332
17-03-17 21:39:23.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.508 -07 000000480 INF: FPGA: Recv ZSGSRD 29339
17-03-17 21:39:23.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.518 -07 000000012 INF: FPGA: Recv ZSGSRD 29340
17-03-17 21:39:23.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.528 -07 000000512 INF: FPGA: Recv ZSGSRD 29341
17-03-17 21:39:23.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.538 -07 000000576 INF: FPGA: Recv ZSGSRD 29340
17-03-17 21:39:23.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.548 -07 000000429 INF: FPGA: Recv ZSGSRD 29331
17-03-17 21:39:23.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.558 -07 000000431 INF: FPGA: Recv ZSGSRD 29342
17-03-17 21:39:23.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:23.568 -07 000000012 INF: FPGA: Recv ZSGSRD 29337
17-03-17 21:39:23.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.578 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:23.578 -07 000000459 INF: FPGA: Recv ZPIEZORD 25054
17-03-17 21:39:23.588 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:23.588 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.4 V.
17-03-17 21:39:23.588 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29338 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29340 (-128.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29331 (-128.0 uncal um), Max = 29342 (-128.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:39:23.588 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29338, posNoise = 4, negNoise = 7
17-03-17 21:39:23.588 -07 000000610 INF: Z Motor: After move to -0.128789, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:23.588 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:39:23.588 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:23.588 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:23.588 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:23.588 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:23.588 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:23.588 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:23.588 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:23.588 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:39:23.588 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:23.588 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:23.588 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:23.588 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:23.598 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:39:23.598 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:23.598 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:39:23.598 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:23.608 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:39:23.608 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:39:23.608 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:39:23.608 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:39:23.608 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28311 150\n [Camera]
17-03-17 21:39:23.808 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:24.238 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:24.238 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:24.248 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:24.248 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:24.248 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:24.248 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:24.248 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:24.248 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:39:24.248 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:24.248 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2201991440, 0x0, 418435064) start.
17-03-17 21:39:24.438 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28311 820
17-03-17 21:39:24.588 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 973
17-03-17 21:39:24.628 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2201991440, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:39:24.628 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:39:24.628 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:24.628 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:39:24.628 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:39:24.628 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:24.628 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:24.638 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:24.638 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:39:24.638 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:39:24.798 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:24.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:24.798 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:24.908 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:24.908 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:24.908 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:24.908 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:24.908 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:39:24.908 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:24.908 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2197586136, 0x0, 418435064) start.
17-03-17 21:39:24.988 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP 1373
17-03-17 21:39:24.988 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:24.988 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28311 150' command took 2 ms to send, 1374 ms to get response, and 1380 ms overall
17-03-17 21:39:24.988 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.129382
17-03-17 21:39:24.988 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12938 mm
17-03-17 21:39:24.988 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:24.988 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 21:39:24.988 -07 000000626 INF: Y Motor: Moving to 73.1926 mm, started at 72.3501 mm, delta = 0.8425 mm
17-03-17 21:39:24.988 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:24.988 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 28264, sync = True, waitForSettling = False)
17-03-17 21:39:24.988 -07 000000608 INF: Z Motor: Moving to -0.129384 mm, started at -0.128797 mm, distance = -0.59 um
17-03-17 21:39:24.998 -07 000000608 INF: FPGA: Xmit ZDACW 28264\n [Z Motor]
17-03-17 21:39:24.998 -07 000000458 INF: FPGA: Recv YRDPOS 148174
17-03-17 21:39:24.998 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:39:24.998 -07 000000626 INF: Y Motor: Encoder = 148174 = motor step 115760.9 = 72.3506 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:24.998 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:39:24.998 -07 000000626 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:24.998 -07 000000626 INF: Y Motor: Moving 1347 steps-26
17-03-17 21:39:25.008 -07 000000608 INF: FPGA: 'ZDACW 28264' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:25.008 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:25.018 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:25.018 -07 000000627 INF: FPGA: Recv ZDACR 28264
17-03-17 21:39:25.028 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:39:25.028 -07 000000608 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 21:39:25.288 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2197586136, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:39:25.288 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:39:25.288 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:25.288 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:39:25.288 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:39:25.288 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:25.298 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:25.298 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 21:39:25.298 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 503 ms.
17-03-17 21:39:25.298 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:39:25.378 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 21:39:25.378 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 380 ms overall
17-03-17 21:39:25.418 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:25.428 -07 000000501 INF: FPGA: Recv YRDPOS 149866
17-03-17 21:39:25.428 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:39:25.428 -07 000000626 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:25.428 -07 000000626 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm)
17-03-17 21:39:25.428 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.843 mm, average velocity = 2.211 mm/sec
17-03-17 21:39:26.378 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:26.378 -07 000000431 INF: FPGA: Recv YRDPOS 149866
17-03-17 21:39:26.388 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:26.388 -07 000000626 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:26.408 -07 000000626 INF: Y Motor: After move to 73.192604, error = -0.015846, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:26.408 -07 000000626 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:26.408 -07 000000626 INF: Y Motor: Moved to 73.1768 after 1415 ms (table move)
17-03-17 21:39:26.408 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129384 mm (DAC = 28264)
17-03-17 21:39:26.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.418 -07 000000429 INF: FPGA: Recv ZSGSRD 29436
17-03-17 21:39:26.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:26.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.418 -07 000000627 INF: FPGA: Recv ZSGSRD 29428
17-03-17 21:39:26.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.428 -07 000000547 INF: FPGA: Recv ZSGSRD 29425
17-03-17 21:39:26.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.438 -07 000000501 INF: FPGA: Recv ZSGSRD 29431
17-03-17 21:39:26.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.448 -07 000000012 INF: FPGA: Recv ZSGSRD 29430
17-03-17 21:39:26.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.458 -07 000000475 INF: FPGA: Recv ZSGSRD 29437
17-03-17 21:39:26.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.468 -07 000000424 INF: FPGA: Recv ZSGSRD 29441
17-03-17 21:39:26.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.478 -07 000000476 INF: FPGA: Recv ZSGSRD 29432
17-03-17 21:39:26.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.488 -07 000000501 INF: FPGA: Recv ZSGSRD 29427
17-03-17 21:39:26.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.498 -07 000000480 INF: FPGA: Recv ZSGSRD 29423
17-03-17 21:39:26.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.508 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:26.508 -07 000000576 INF: FPGA: Recv ZPIEZORD 25178
17-03-17 21:39:26.518 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.518 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.313 V. Piezo Error = -9.3 V.
17-03-17 21:39:26.518 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29431 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29430 (-128.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29423 (-128.6 uncal um), Max = 29441 (-128.7 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:39:26.518 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29431, posNoise = 10, negNoise = 8
17-03-17 21:39:26.518 -07 000000610 INF: Z Motor: After move to -0.129384, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:26.518 -07 000000610 INF: Z Motor: Settle wait time = 1418 ms, measure time = 102 ms (allowed 150 ms), total time = 1520 ms
17-03-17 21:39:26.518 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:26.568 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1573 ms
17-03-17 21:39:26.568 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:26.568 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1767578125, Z-position -0.129394339555302. ----------
17-03-17 21:39:26.568 -07 000000610 INF: Cycle	53	Tile	17	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:26.568 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28087, sync = True, waitForSettling = True)
17-03-17 21:39:26.568 -07 000000610 INF: Z Motor: Moving to -0.128574 mm, started at -0.129394 mm, distance = 0.82 um
17-03-17 21:39:26.568 -07 000000610 INF: FPGA: Xmit ZDACW 28087\n [Z Motor]
17-03-17 21:39:26.568 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:39:26.578 -07 000000610 INF: FPGA: 'ZDACW 28087' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:39:26.578 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:26.578 -07 000000569 INF: FPGA: Recv ZDACR 28087
17-03-17 21:39:26.588 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.588 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:26.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.738 -07 000000382 INF: FPGA: Recv ZSGSRD 29302
17-03-17 21:39:26.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:26.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.748 -07 000000512 INF: FPGA: Recv ZSGSRD 29304
17-03-17 21:39:26.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.758 -07 000000576 INF: FPGA: Recv ZSGSRD 29312
17-03-17 21:39:26.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.768 -07 000000627 INF: FPGA: Recv ZSGSRD 29303
17-03-17 21:39:26.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.778 -07 000000480 INF: FPGA: Recv ZSGSRD 29303
17-03-17 21:39:26.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.788 -07 000000608 INF: FPGA: Recv ZSGSRD 29310
17-03-17 21:39:26.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.798 -07 000000415 INF: FPGA: Recv ZSGSRD 29306
17-03-17 21:39:26.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.808 -07 000000547 INF: FPGA: Recv ZSGSRD 29301
17-03-17 21:39:26.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.818 -07 000000012 INF: FPGA: Recv ZSGSRD 29300
17-03-17 21:39:26.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:26.828 -07 000000569 INF: FPGA: Recv ZSGSRD 29303
17-03-17 21:39:26.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.838 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:26.838 -07 000000608 INF: FPGA: Recv ZPIEZORD 25015
17-03-17 21:39:26.848 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:26.848 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.286 V. Piezo Error = -9.4 V.
17-03-17 21:39:26.848 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29304 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29303 (-127.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29300 (-127.8 uncal um), Max = 29312 (-127.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:39:26.848 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29304, posNoise = 8, negNoise = 4
17-03-17 21:39:26.848 -07 000000610 INF: Z Motor: After move to -0.128574, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:26.848 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:39:26.848 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:26.848 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:26.848 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:26.848 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:26.848 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:26.848 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:26.848 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:26.848 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:26.848 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:26.848 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:26.848 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:39:26.848 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:26.848 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:39:26.858 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:26.858 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:39:26.858 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:26.858 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:39:26.858 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:39:26.868 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:39:26.868 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:39:26.868 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28264 150\n [Camera]
17-03-17 21:39:26.898 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:26.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:27.068 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:27.498 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:27.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:27.498 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:27.498 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:27.498 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-17 21:39:27.508 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:27.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:27.508 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:27.508 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:27.508 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:39:27.688 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.999021,
17-03-17 21:39:27.698 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28264 820
17-03-17 21:39:27.848 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:27.878 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:39:27.878 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:39:27.878 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:27.878 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:39:27.878 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:39:27.878 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:27.888 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:27.888 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:39:27.888 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:27.888 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:39:28.058 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:28.058 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:28.058 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:28.058 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:28.058 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:39:28.058 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:28.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:28.058 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:28.178 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:28.178 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:39:28.248 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:28.248 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:28.248 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28264 150' command took 2 ms to send, 1372 ms to get response, and 1379 ms overall
17-03-17 21:39:28.248 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128866
17-03-17 21:39:28.248 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12887 mm
17-03-17 21:39:28.248 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:28.248 -07 000000458 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 21:39:28.248 -07 000000459 INF: Z Motor: Entering MoveAbsStepped (DAC = 28151, sync = True, waitForSettling = False)
17-03-17 21:39:28.248 -07 000000459 INF: Z Motor: Moving to -0.128867 mm, started at -0.128578 mm, distance = -0.29 um
17-03-17 21:39:28.248 -07 000000459 INF: FPGA: Xmit ZDACW 28151\n [Z Motor]
17-03-17 21:39:28.248 -07 000000458 INF: Y Motor: Moving to 74.0226 mm, started at 73.1768 mm, delta = 0.8458 mm
17-03-17 21:39:28.248 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:39:28.258 -07 000000459 INF: FPGA: 'ZDACW 28151' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:39:28.258 -07 000000459 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:28.258 -07 000000480 INF: FPGA: Recv ZDACR 28151
17-03-17 21:39:28.268 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:28.268 -07 000000459 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:28.268 -07 000000459 INF: Z Motor: MoveAbsStepped took 13 ms (did NOT wait for settling yet))
17-03-17 21:39:28.268 -07 000000438 INF: FPGA: Recv YRDPOS 149866
17-03-17 21:39:28.278 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 21:39:28.278 -07 000000458 INF: Y Motor: Encoder = 149866 = motor step 117082.8 = 73.1768 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:28.278 -07 000000458 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:28.278 -07 000000458 INF: Y Motor: Moving 1353 steps-32
17-03-17 21:39:28.278 -07 000000458 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:28.438 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:39:28.438 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:39:28.438 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:28.438 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:28.438 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:39:28.548 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:39:28.548 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:39:28.548 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:28.558 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:39:28.558 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 503 ms.
17-03-17 21:39:28.648 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:39:28.648 -07 000000458 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-17 21:39:28.678 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:28.688 -07 000000429 INF: FPGA: Recv YRDPOS 151570
17-03-17 21:39:28.698 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:28.698 -07 000000458 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:28.698 -07 000000458 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:39:28.698 -07 000000458 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.846 mm, average velocity = 2.238 mm/sec
17-03-17 21:39:29.648 -07 000000458 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:29.648 -07 000000438 INF: FPGA: Recv YRDPOS 151570
17-03-17 21:39:29.658 -07 000000458 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:29.658 -07 000000458 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:29.668 -07 000000458 INF: Y Motor: After move to 74.022606, error = -0.013817, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:29.668 -07 000000458 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:39:29.668 -07 000000458 INF: Y Motor: Moved to 74.0088 after 1421 ms (table move)
17-03-17 21:39:29.678 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128867 mm (DAC = 28151)
17-03-17 21:39:29.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.678 -07 000000608 INF: FPGA: Recv ZSGSRD 29351
17-03-17 21:39:29.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.688 -07 000000512 INF: FPGA: Recv ZSGSRD 29349
17-03-17 21:39:29.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.698 -07 000000480 INF: FPGA: Recv ZSGSRD 29348
17-03-17 21:39:29.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.708 -07 000000627 INF: FPGA: Recv ZSGSRD 29354
17-03-17 21:39:29.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.718 -07 000000576 INF: FPGA: Recv ZSGSRD 29352
17-03-17 21:39:29.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.728 -07 000000547 INF: FPGA: Recv ZSGSRD 29347
17-03-17 21:39:29.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.738 -07 000000476 INF: FPGA: Recv ZSGSRD 29349
17-03-17 21:39:29.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.748 -07 000000431 INF: FPGA: Recv ZSGSRD 29351
17-03-17 21:39:29.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.758 -07 000000415 INF: FPGA: Recv ZSGSRD 29347
17-03-17 21:39:29.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.768 -07 000000576 INF: FPGA: Recv ZSGSRD 29349
17-03-17 21:39:29.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.778 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:29.778 -07 000000608 INF: FPGA: Recv ZPIEZORD 25107
17-03-17 21:39:29.788 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.788 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.296 V. Piezo Error = -9.3 V.
17-03-17 21:39:29.788 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29350 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29349 (-128.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29347 (-128.1 uncal um), Max = 29354 (-128.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:39:29.788 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29350, posNoise = 4, negNoise = 3
17-03-17 21:39:29.788 -07 000000610 INF: Z Motor: After move to -0.128867, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:29.788 -07 000000610 INF: Z Motor: Settle wait time = 1423 ms, measure time = 110 ms (allowed 150 ms), total time = 1533 ms
17-03-17 21:39:29.788 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:29.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1575 ms
17-03-17 21:39:29.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:29.828 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0087890625, Z-position -0.128873978371819. ----------
17-03-17 21:39:29.828 -07 000000610 INF: Cycle	53	Tile	18	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:29.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27974, sync = True, waitForSettling = True)
17-03-17 21:39:29.828 -07 000000610 INF: Z Motor: Moving to -0.128057 mm, started at -0.128874 mm, distance = 0.82 um
17-03-17 21:39:29.828 -07 000000610 INF: FPGA: Xmit ZDACW 27974\n [Z Motor]
17-03-17 21:39:29.828 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:39:29.838 -07 000000610 INF: FPGA: 'ZDACW 27974' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:39:29.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:29.838 -07 000000459 INF: FPGA: Recv ZDACR 27974
17-03-17 21:39:29.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:29.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:29.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:29.998 -07 000000501 INF: FPGA: Recv ZSGSRD 29229
17-03-17 21:39:30.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:30.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.008 -07 000000480 INF: FPGA: Recv ZSGSRD 29225
17-03-17 21:39:30.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.018 -07 000000415 INF: FPGA: Recv ZSGSRD 29221
17-03-17 21:39:30.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.028 -07 000000431 INF: FPGA: Recv ZSGSRD 29228
17-03-17 21:39:30.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.038 -07 000000608 INF: FPGA: Recv ZSGSRD 29216
17-03-17 21:39:30.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.048 -07 000000438 INF: FPGA: Recv ZSGSRD 29225
17-03-17 21:39:30.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.058 -07 000000382 INF: FPGA: Recv ZSGSRD 29218
17-03-17 21:39:30.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.068 -07 000000458 INF: FPGA: Recv ZSGSRD 29220
17-03-17 21:39:30.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.078 -07 000000627 INF: FPGA: Recv ZSGSRD 29228
17-03-17 21:39:30.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:30.088 -07 000000626 INF: FPGA: Recv ZSGSRD 29219
17-03-17 21:39:30.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.098 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:30.098 -07 000000429 INF: FPGA: Recv ZPIEZORD 24975
17-03-17 21:39:30.108 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:30.108 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.269 V. Piezo Error = -9.3 V.
17-03-17 21:39:30.108 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29223 (-127.3 uncal um), Error = 0.8 uncal um, Median = 29223 (-127.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29216 (-127.2 uncal um), Max = 29229 (-127.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:39:30.108 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29223, posNoise = 6, negNoise = 7
17-03-17 21:39:30.108 -07 000000610 INF: Z Motor: After move to -0.128057, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:30.108 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:39:30.108 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:30.108 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:30.108 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:30.108 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:30.108 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:30.108 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:30.108 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:30.108 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:30.108 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:39:30.108 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:30.108 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:39:30.108 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:30.108 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:39:30.108 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:30.118 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:39:30.118 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:30.118 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:39:30.118 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 21:39:30.118 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:39:30.118 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:39:30.128 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28151 150\n [Camera]
17-03-17 21:39:30.328 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:39:30.758 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:30.758 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:30.768 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:30.768 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:30.768 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:30.768 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:30.768 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:30.768 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-17 21:39:30.778 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:30.778 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:39:30.958 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28151 820
17-03-17 21:39:31.108 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:31.138 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:39:31.138 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 21:39:31.138 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:31.148 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:31.148 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 21:39:31.148 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 21:39:31.148 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:31.148 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:39:31.148 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:31.158 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:39:31.318 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:31.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:31.318 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:31.318 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:31.318 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) start.
17-03-17 21:39:31.318 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:31.318 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:31.318 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:31.318 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:31.318 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:39:31.508 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1372
17-03-17 21:39:31.508 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:31.508 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28151 150' command took 2 ms to send, 1372 ms to get response, and 1379 ms overall
17-03-17 21:39:31.508 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.128489
17-03-17 21:39:31.508 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12849 mm
17-03-17 21:39:31.508 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:39:31.508 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 21:39:31.508 -07 000000424 INF: Y Motor: Moving to 74.8526 mm, started at 74.0088 mm, delta = 0.8438 mm
17-03-17 21:39:31.508 -07 000000475 INF: Z Motor: Entering MoveAbsStepped (DAC = 28068, sync = True, waitForSettling = False)
17-03-17 21:39:31.508 -07 000000475 INF: Z Motor: Moving to -0.128487 mm, started at -0.128058 mm, distance = -0.43 um
17-03-17 21:39:31.508 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:31.518 -07 000000475 INF: FPGA: Xmit ZDACW 28068\n [Z Motor]
17-03-17 21:39:31.518 -07 000000476 INF: FPGA: Recv YRDPOS 151570
17-03-17 21:39:31.518 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:39:31.518 -07 000000424 INF: Y Motor: Encoder = 151570 = motor step 118414.1 = 74.0088 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:31.518 -07 000000424 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:39:31.518 -07 000000424 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:39:31.518 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:39:31.528 -07 000000475 INF: FPGA: 'ZDACW 28068' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:31.528 -07 000000475 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:31.528 -07 000000608 INF: FPGA: Recv ZDACR 28068
17-03-17 21:39:31.538 -07 000000475 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:31.538 -07 000000475 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 21:39:31.538 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:39:31.708 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 656674232, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:39:31.708 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:39:31.708 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:31.708 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 391 ms.
17-03-17 21:39:31.708 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:39:31.708 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:31.708 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:31.708 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:39:31.718 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:31.718 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:39:31.898 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 52. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:31.908 -07 000000459 INF: FPGA: Recv YMVTILE
17-03-17 21:39:31.908 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-17 21:39:31.938 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:31.938 -07 000000480 INF: FPGA: Recv YRDPOS 153257
17-03-17 21:39:31.948 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:39:31.948 -07 000000424 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:31.948 -07 000000424 INF: Y Motor: Position error before settling (table move) = -41 encoder counts (-0.020 mm)
17-03-17 21:39:31.948 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.844 mm, average velocity = 2.131 mm/sec
17-03-17 21:39:32.898 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:32.898 -07 000000459 INF: FPGA: Recv YRDPOS 153258
17-03-17 21:39:32.908 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:32.908 -07 000000424 INF: Y Motor: Encoder = 153258 = motor step 119732.8 = 74.8330 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:32.918 -07 000000424 INF: Y Motor: After move to 74.852608, error = -0.019600, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:32.918 -07 000000424 INF: Y Motor: Position error after settling (table move) = -40 encoder counts (-0.020 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:39:32.918 -07 000000424 INF: Y Motor: Moved to 74.8330 after 1407 ms (table move)
17-03-17 21:39:32.928 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128487 mm (DAC = 28068)
17-03-17 21:39:32.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.928 -07 000000431 INF: FPGA: Recv ZSGSRD 29291
17-03-17 21:39:32.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.938 -07 000000475 INF: FPGA: Recv ZSGSRD 29288
17-03-17 21:39:32.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.948 -07 000000512 INF: FPGA: Recv ZSGSRD 29289
17-03-17 21:39:32.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.958 -07 000000429 INF: FPGA: Recv ZSGSRD 29286
17-03-17 21:39:32.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.968 -07 000000415 INF: FPGA: Recv ZSGSRD 29289
17-03-17 21:39:32.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.978 -07 000000431 INF: FPGA: Recv ZSGSRD 29294
17-03-17 21:39:32.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.988 -07 000000627 INF: FPGA: Recv ZSGSRD 29291
17-03-17 21:39:32.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:32.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:32.998 -07 000000382 INF: FPGA: Recv ZSGSRD 29291
17-03-17 21:39:33.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.008 -07 000000438 INF: FPGA: Recv ZSGSRD 29289
17-03-17 21:39:33.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.018 -07 000000608 INF: FPGA: Recv ZSGSRD 29290
17-03-17 21:39:33.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.028 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:33.028 -07 000000476 INF: FPGA: Recv ZPIEZORD 25085
17-03-17 21:39:33.038 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.038 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.283 V. Piezo Error = -9.2 V.
17-03-17 21:39:33.038 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29290 (-127.7 uncal um), Error = 0.8 uncal um, Median = 29290 (-127.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29286 (-127.7 uncal um), Max = 29294 (-127.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:39:33.038 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29290, posNoise = 4, negNoise = 4
17-03-17 21:39:33.038 -07 000000610 INF: Z Motor: After move to -0.128487, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:33.038 -07 000000610 INF: Z Motor: Settle wait time = 1411 ms, measure time = 110 ms (allowed 150 ms), total time = 1521 ms
17-03-17 21:39:33.038 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:39:33.058 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.973092,
17-03-17 21:39:33.078 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1563 ms
17-03-17 21:39:33.078 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:39:33.078 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8330078125, Z-position -0.128488525643313. ----------
17-03-17 21:39:33.078 -07 000000610 INF: Cycle	53	Tile	19	Exposure Settings		A	435	G	209	T	209	C	435
17-03-17 21:39:33.078 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27892, sync = True, waitForSettling = True)
17-03-17 21:39:33.078 -07 000000610 INF: Z Motor: Moving to -0.127681 mm, started at -0.128489 mm, distance = 0.81 um
17-03-17 21:39:33.088 -07 000000610 INF: FPGA: Xmit ZDACW 27892\n [Z Motor]
17-03-17 21:39:33.088 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:39:33.098 -07 000000610 INF: FPGA: 'ZDACW 27892' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:39:33.098 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:39:33.098 -07 000000429 INF: FPGA: Recv ZDACR 27892
17-03-17 21:39:33.108 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.108 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:39:33.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.258 -07 000000569 INF: FPGA: Recv ZSGSRD 29165
17-03-17 21:39:33.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:33.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.268 -07 000000429 INF: FPGA: Recv ZSGSRD 29165
17-03-17 21:39:33.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.278 -07 000000475 INF: FPGA: Recv ZSGSRD 29168
17-03-17 21:39:33.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.288 -07 000000512 INF: FPGA: Recv ZSGSRD 29161
17-03-17 21:39:33.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.298 -07 000000431 INF: FPGA: Recv ZSGSRD 29168
17-03-17 21:39:33.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.308 -07 000000569 INF: FPGA: Recv ZSGSRD 29167
17-03-17 21:39:33.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.318 -07 000000429 INF: FPGA: Recv ZSGSRD 29163
17-03-17 21:39:33.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.328 -07 000000480 INF: FPGA: Recv ZSGSRD 29165
17-03-17 21:39:33.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.338 -07 000000512 INF: FPGA: Recv ZSGSRD 29158
17-03-17 21:39:33.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:39:33.348 -07 000000627 INF: FPGA: Recv ZSGSRD 29161
17-03-17 21:39:33.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.358 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:39:33.358 -07 000000501 INF: FPGA: Recv ZPIEZORD 24916
17-03-17 21:39:33.368 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:33.368 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.256 V. Piezo Error = -9.3 V.
17-03-17 21:39:33.368 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.7 um, Read 10 ADC samples: Avg = 29164 (-126.9 uncal um), Error = 0.8 uncal um, Median = 29165 (-126.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29158 (-126.9 uncal um), Max = 29168 (-126.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:39:33.368 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29164, posNoise = 4, negNoise = 6
17-03-17 21:39:33.368 -07 000000610 INF: Z Motor: After move to -0.127681, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:39:33.368 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-17 21:39:33.368 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:39:33.368 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:39:33.368 -07 000000459 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:39:33.368 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:39:33.368 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:39:33.368 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:39:33.368 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:39:33.368 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:39:33.368 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:39:33.368 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:39:33.378 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms.
17-03-17 21:39:33.378 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:39:33.378 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:39:33.378 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:39:33.378 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:39:33.378 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:39:33.388 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:39:33.388 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:39:33.388 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:39:33.388 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:39:33.398 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 435 435 209 209 28068 150\n [Camera]
17-03-17 21:39:33.598 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-17 21:39:34.028 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 627
17-03-17 21:39:34.028 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 627
17-03-17 21:39:34.028 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:34.028 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:34.028 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:39:34.028 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 627
17-03-17 21:39:34.028 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 627
17-03-17 21:39:34.028 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:34.028 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:34.028 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 21:39:34.218 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28068 820
17-03-17 21:39:34.368 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 970
17-03-17 21:39:34.418 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 389 ms.
17-03-17 21:39:34.418 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:39:34.418 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:34.418 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 21:39:34.418 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:39:34.418 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:34.428 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:34.428 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:34.428 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:39:34.438 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:39:34.578 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1179
17-03-17 21:39:34.578 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1179
17-03-17 21:39:34.578 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:39:34.578 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:39:34.578 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:39:34.578 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1179
17-03-17 21:39:34.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1179
17-03-17 21:39:34.588 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:39:34.588 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:39:34.588 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 21:39:34.768 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP 1371
17-03-17 21:39:34.768 -07 000000459 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:39:34.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 435 435 209 209 28068 150' command took 2 ms to send, 1368 ms to get response, and 1384 ms overall
17-03-17 21:39:34.958 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:39:34.958 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:39:34.958 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:34.968 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:39:34.968 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:39:34.968 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:39:34.968 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:39:34.968 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:39:34.968 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 21:39:34.968 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:39:34.978 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:39:35.008 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-17 21:39:35.008 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 21:39:35.048 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-17 21:39:35.068 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-17 21:39:35.068 -07 000000610 INF: Imaging Cycle 53: ScanTilesCommand Cycle 53 time end. Duration was 140013 ms.
17-03-17 21:39:35.068 -07 000000610 INF: =================== Cycle #53 ===================
17-03-17 21:39:35.068 -07 000000610 INF: ===================  ===================
17-03-17 21:39:35.068 -07 000000569 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 21:39:35.068 -07 000000459 INF: FPGA: Recv EXLED1ADCR 28
17-03-17 21:39:35.078 -07 000000569 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:39:35.078 -07 000000569 INF: GreenLED: Using Green data: Photodiode ADC 28 --> 0.0 mW (old method), or 2.1 mW (new method). Difference = 2.1 mW
17-03-17 21:39:35.078 -07 000000569 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 53, FrontChillerTemperature: 3.973092, FrontChillerHeatSinkTemperature: 0.300783, AmbientTemperature: 19.04635, FlowCellCompartmentTemperature: 21.99255, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 19.01646, GreenLEDSensorTemperature: 25.47876, PhotodiodePowerAdcGreen: 28, PhotodiodePowerMwGreen: 2.10942
17-03-17 21:39:35.238 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.