17-03-17 21:39:35.288 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:39:35.288 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-17 21:39:35.288 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8330 mm, delta = 0.5476 mm
17-03-17 21:39:35.288 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:35.298 -07 000000476 INF: FPGA: Recv YRDPOS 153258
17-03-17 21:39:35.298 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 6 ms overall
17-03-17 21:39:35.298 -07 000000610 INF: Y Motor: Encoder = 153258 = motor step 119732.8 = 74.8330 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:35.298 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-17 21:39:35.298 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-17 21:39:35.298 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-17 21:39:35.408 -07 000000480 INF: FPGA: Recv YMVTO 154377 870
17-03-17 21:39:35.408 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 108 ms to get response, and 116 ms overall
17-03-17 21:39:35.408 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm)
17-03-17 21:39:35.408 -07 000000610 INF: Y Motor: To move from 74.833 to 75.381 (0.548 mm) should take 876 steps, but required 870 steps (0.544 mm). Slippage = -0.004 mm (-0.01%).
17-03-17 21:39:35.408 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.548 mm, average velocity = 4.720 mm/sec
17-03-17 21:39:36.898 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=785, R2=806, Total=1591. Warn if over 250 bubbles per interval.
17-03-17 21:39:38.408 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:39:38.408 -07 000000415 INF: FPGA: Recv YRDPOS 154380
17-03-17 21:39:38.418 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:39:38.418 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:39:38.438 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:39:38.438 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm)
17-03-17 21:39:38.438 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3149 ms
17-03-17 21:39:38.438 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 60° ===================
17-03-17 21:39:38.448 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.993549,
17-03-17 21:39:38.448 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-17 21:39:38.798 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 21:39:38.798 -07 000000431 INF: FPGA: Recv TEC2EN 
17-03-17 21:39:38.808 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:39:38.808 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 60° ===================
17-03-17 21:39:38.808 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:39:38.808 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:39:38.808 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:39:38.838 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 21:39:38.838 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-17 21:39:38.838 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 21:39:39.138 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:39:39.158 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 21:39:39.158 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 21:39:39.208 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:39:39.228 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:39:39.228 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:39:39.328 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:39:39.328 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 21:39:39.328 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:39.358 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 21:39:39.358 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 21:39:39.358 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:39:39.488 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 21:39:39.528 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:41.898 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 2
17-03-17 21:39:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=2, R2=1, Total=3. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=787, R2=807, Total=1594. Warn if over 250 bubbles per interval.
17-03-17 21:39:42.658 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:42.688 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:43.108 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:43.138 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:43.558 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:43.588 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:43.588 -07 000000610 INF: LanePump: Waited 4050 ms for pump motion to complete
17-03-17 21:39:43.588 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:39:43.718 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:43.748 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:39:43.748 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:39:43.818 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.979922,
17-03-17 21:39:43.878 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:43.908 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:39:43.908 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:39:43.908 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:39:44.038 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:39:44.068 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:44.498 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:44.528 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:44.528 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:39:44.528 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:39:45.748 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:39:45.748 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-17 21:39:45.748 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:39:45.768 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:39:45.768 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-17 21:39:45.768 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-17 21:39:45.908 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:39:45.928 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-17 21:39:45.928 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-17 21:39:45.978 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:39:45.998 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 21:39:45.998 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:39:46.098 -07 000000610 INF: =================== Cycle #54, Pumping Reagent CMS (4) ===================
17-03-17 21:39:46.098 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 21:39:46.098 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:46.128 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:39:46.128 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:39:46.128 -07 000000610 INF: =================== Cycle #54, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-17 21:39:46.258 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 21:39:46.298 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:46.898 -07 000000608 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-17 21:39:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=787, R2=808, Total=1595. Warn if over 250 bubbles per interval.
17-03-17 21:39:47.738 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:47.768 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:48.188 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:48.218 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:48.218 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 21:39:48.218 -07 000000610 INF: =================== Cycle #54, Pumping Reagent CMS (4) ===================
17-03-17 21:39:48.348 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:48.378 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:39:48.378 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:39:48.508 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:48.538 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:39:48.538 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:39:48.538 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:39:48.668 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:39:48.698 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:49.128 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:49.158 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:49.158 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:39:49.158 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:39:49.178 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.004458,
17-03-17 21:39:50.378 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:39:50.378 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:39:50.378 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:39:50.398 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 21:39:50.398 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-17 21:39:50.398 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-17 21:39:50.548 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:39:50.568 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-17 21:39:50.568 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-17 21:39:50.618 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:39:50.638 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:39:50.638 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:39:50.738 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:39:50.738 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 21:39:50.738 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:50.778 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:39:50.778 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:39:50.778 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:39:50.908 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 21:39:50.948 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:51.818 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:51.848 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:51.848 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 21:39:51.848 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:39:51.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-17 21:39:51.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=789, R2=810, Total=1599. Warn if over 250 bubbles per interval.
17-03-17 21:39:51.978 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:52.008 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:39:52.008 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:39:52.138 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:39:52.168 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:39:52.168 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:39:52.168 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:39:52.298 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:39:52.328 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:52.758 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:52.788 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:52.788 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:39:52.788 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:39:52.788 -07 000000608 INF: WaitCommand(10000) start
17-03-17 21:39:52.788 -07 000000476 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:39:52.788 -07 000000476 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 21:39:54.008 -07 000000476 INF: AsyncDelayTimer waited 1216ms
17-03-17 21:39:54.008 -07 000000476 INF: LanePump: Xmit /1?\r
17-03-17 21:39:54.038 -07 000000476 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:39:54.038 -07 000000476 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:39:54.168 -07 000000476 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 21:39:54.208 -07 000000476 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:54.548 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.012614,
17-03-17 21:39:55.738 -07 000000476 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:55.768 -07 000000476 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:39:56.188 -07 000000476 INF: LanePump: Xmit /1Q\r
17-03-17 21:39:56.218 -07 000000476 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:39:56.218 -07 000000476 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 21:39:56.218 -07 000000476 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:39:56.218 -07 000000476 INF: ===================  ===================
17-03-17 21:39:56.898 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:39:56.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=789, R2=810, Total=1599. Warn if over 250 bubbles per interval.
17-03-17 21:39:59.918 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.001704,
17-03-17 21:40:01.898 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-17 21:40:01.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=789, R2=811, Total=1600. Warn if over 250 bubbles per interval.
17-03-17 21:40:02.798 -07 000000608 INF: WaitCommand(10000) end
17-03-17 21:40:02.798 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:40:02.798 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-17 21:40:02.798 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:02.828 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 21:40:02.828 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 21:40:02.828 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:40:02.958 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-17 21:40:02.998 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:05.288 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.988112,
17-03-17 21:40:06.898 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:40:06.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=789, R2=811, Total=1600. Warn if over 250 bubbles per interval.
17-03-17 21:40:09.128 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:09.158 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:09.578 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:09.608 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:10.028 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:10.058 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:10.478 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:10.508 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:10.658 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.989471,
17-03-17 21:40:10.928 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:10.958 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:10.958 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-17 21:40:10.958 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:40:11.088 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:11.118 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 21:40:11.118 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 21:40:11.248 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:11.278 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 21:40:11.278 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 21:40:11.278 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:40:11.408 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:40:11.438 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:11.868 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:11.898 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:11.898 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:40:11.898 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:40:11.898 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 10 R1 7
17-03-17 21:40:11.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=7, R2=10, Total=17. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=796, R2=821, Total=1617. Warn if over 250 bubbles per interval.
17-03-17 21:40:13.118 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:40:13.118 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-17 21:40:13.118 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:40:13.138 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:40:13.138 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-17 21:40:13.138 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-17 21:40:13.348 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:40:13.368 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-17 21:40:13.368 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-17 21:40:13.418 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:40:13.438 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 21:40:13.438 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:40:13.538 -07 000000610 INF: =================== Cycle #54, Pumping Reagent IMT (1) ===================
17-03-17 21:40:13.538 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 21:40:13.538 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:13.568 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 21:40:13.568 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 21:40:13.568 -07 000000610 INF: =================== Cycle #54, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-17 21:40:13.698 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 21:40:13.738 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:15.178 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:15.208 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:15.628 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:15.658 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:15.658 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete
17-03-17 21:40:15.658 -07 000000610 INF: =================== Cycle #54, Pumping Reagent IMT (1) ===================
17-03-17 21:40:15.788 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:15.818 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 21:40:15.818 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 21:40:15.948 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:15.978 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 21:40:15.978 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 21:40:15.978 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:40:16.028 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.993549,
17-03-17 21:40:16.108 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:40:16.138 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:16.568 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:16.598 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:16.598 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:40:16.598 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:40:16.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 4 R1 4
17-03-17 21:40:16.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=4, R2=4, Total=8. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=800, R2=825, Total=1625. Warn if over 250 bubbles per interval.
17-03-17 21:40:17.818 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-17 21:40:17.818 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:40:17.818 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:40:17.838 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 21:40:17.838 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-17 21:40:17.838 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 21:40:18.068 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:40:18.088 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-17 21:40:18.088 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-17 21:40:18.138 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:40:18.158 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:40:18.158 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:40:18.258 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:40:18.258 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 21:40:18.258 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:18.288 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 21:40:18.288 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 21:40:18.288 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:40:18.418 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 21:40:18.458 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:19.328 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:19.358 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:19.358 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 21:40:19.358 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:40:19.488 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:19.518 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 21:40:19.518 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 21:40:19.648 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:19.678 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 21:40:19.678 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 21:40:19.678 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:40:19.808 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:40:19.838 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:20.268 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:20.298 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:20.298 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:40:20.298 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:40:20.298 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 65° ===================
17-03-17 21:40:20.298 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-17 21:40:20.298 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-17 21:40:20.298 -07 000000512 INF: FPGA: Recv TEC2TEMP 
17-03-17 21:40:20.308 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:40:20.308 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 21:40:20.308 -07 000000480 INF: FPGA: Recv TEC2EN 
17-03-17 21:40:20.318 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:40:20.318 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 65° ===================
17-03-17 21:40:20.318 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:40:20.318 -07 000000610 INF: WaitCommand(30000) start
17-03-17 21:40:21.398 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.970374,
17-03-17 21:40:21.898 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 2
17-03-17 21:40:21.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=2, R2=1, Total=3. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=802, R2=826, Total=1628. Warn if over 250 bubbles per interval.
17-03-17 21:40:26.768 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.979922,
17-03-17 21:40:26.898 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:40:26.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=802, R2=826, Total=1628. Warn if over 250 bubbles per interval.
17-03-17 21:40:31.898 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:40:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=802, R2=826, Total=1628. Warn if over 250 bubbles per interval.
17-03-17 21:40:32.138 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.969015,
17-03-17 21:40:36.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-17 21:40:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=802, R2=827, Total=1629. Warn if over 250 bubbles per interval.
17-03-17 21:40:37.508 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.979922,
17-03-17 21:40:41.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:40:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=802, R2=827, Total=1629. Warn if over 250 bubbles per interval.
17-03-17 21:40:42.878 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.008536,
17-03-17 21:40:46.898 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:40:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=802, R2=827, Total=1629. Warn if over 250 bubbles per interval.
17-03-17 21:40:48.248 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.014009,
17-03-17 21:40:50.328 -07 000000610 INF: WaitCommand(30000) end
17-03-17 21:40:50.328 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:40:50.328 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-17 21:40:50.428 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:50.458 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 21:40:50.458 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 21:40:50.458 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:40:50.588 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-17 21:40:50.628 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:51.168 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:51.198 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:51.198 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-17 21:40:51.198 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:40:51.328 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:51.358 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 21:40:51.358 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 21:40:51.488 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:40:51.518 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 21:40:51.518 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 21:40:51.518 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:40:51.648 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:40:51.678 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:51.898 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 1
17-03-17 21:40:51.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=1, R2=0, Total=1. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=827, Total=1630. Warn if over 250 bubbles per interval.
17-03-17 21:40:52.108 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:52.138 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:52.138 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:40:52.138 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:40:52.138 -07 000000547 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:40:52.138 -07 000000415 INF: WaitCommand(30000) start
17-03-17 21:40:52.138 -07 000000547 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 21:40:53.358 -07 000000547 INF: AsyncDelayTimer waited 1216ms
17-03-17 21:40:53.358 -07 000000547 INF: LanePump: Xmit /1?\r
17-03-17 21:40:53.388 -07 000000547 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 21:40:53.388 -07 000000547 INF: LanePump: Current Position of Pump is: 1920
17-03-17 21:40:53.518 -07 000000547 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 21:40:53.558 -07 000000547 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:53.628 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.012614,
17-03-17 21:40:55.898 -07 000000547 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:55.928 -07 000000547 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:40:56.348 -07 000000547 INF: LanePump: Xmit /1Q\r
17-03-17 21:40:56.378 -07 000000547 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:40:56.378 -07 000000547 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-17 21:40:56.378 -07 000000547 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:40:56.378 -07 000000547 INF: ===================  ===================
17-03-17 21:40:56.898 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:40:56.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=827, Total=1630. Warn if over 250 bubbles per interval.
17-03-17 21:40:58.998 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.012614,
17-03-17 21:41:01.898 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:01.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=827, Total=1630. Warn if over 250 bubbles per interval.
17-03-17 21:41:04.358 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.019446,
17-03-17 21:41:06.898 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-17 21:41:06.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=828, Total=1631. Warn if over 250 bubbles per interval.
17-03-17 21:41:09.728 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.043918,
17-03-17 21:41:11.898 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:11.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=828, Total=1631. Warn if over 250 bubbles per interval.
17-03-17 21:41:15.098 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.043918,
17-03-17 21:41:16.898 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:16.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=828, Total=1631. Warn if over 250 bubbles per interval.
17-03-17 21:41:20.478 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.038479,
17-03-17 21:41:21.898 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:21.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=803, R2=828, Total=1631. Warn if over 250 bubbles per interval.
17-03-17 21:41:22.148 -07 000000415 INF: WaitCommand(30000) end
17-03-17 21:41:22.148 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 22° ===================
17-03-17 21:41:22.148 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-17 21:41:22.148 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-17 21:41:22.148 -07 000000512 INF: FPGA: Recv TEC2TEMP 
17-03-17 21:41:22.158 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:41:22.158 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 21:41:22.158 -07 000000424 INF: FPGA: Recv TEC2EN 
17-03-17 21:41:22.168 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:22.168 -07 000000610 INF: =================== Cycle #54, Flow Cell Temp 22° ===================
17-03-17 21:41:22.168 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:41:22.168 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:41:22.168 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 21:41:22.168 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:22.208 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 21:41:22.208 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 21:41:22.208 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:41:22.338 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 21:41:22.378 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:25.508 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:25.538 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:25.838 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.988112,
17-03-17 21:41:25.958 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:25.988 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:26.408 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:26.438 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:26.438 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 21:41:26.438 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:41:26.568 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:26.598 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:41:26.598 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:41:26.728 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:26.758 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:41:26.758 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:41:26.758 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:41:26.888 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:41:26.898 -07 000000431 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-17 21:41:26.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=804, R2=829, Total=1633. Warn if over 250 bubbles per interval.
17-03-17 21:41:26.918 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:27.348 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:27.378 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:27.378 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:41:27.378 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:41:28.598 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-17 21:41:28.598 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-17 21:41:28.598 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:41:28.618 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:41:28.618 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-17 21:41:28.618 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-17 21:41:28.768 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:41:28.788 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 21:41:28.788 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 21:41:28.838 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:41:28.858 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 21:41:28.858 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:41:28.958 -07 000000610 INF: =================== Cycle #54, Pumping Reagent USM (2) ===================
17-03-17 21:41:28.958 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 21:41:28.958 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:28.988 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 21:41:28.988 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 21:41:28.988 -07 000000610 INF: =================== Cycle #54, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-17 21:41:29.118 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 21:41:29.158 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:30.598 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:30.628 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:31.048 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:31.078 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:31.078 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 21:41:31.078 -07 000000610 INF: =================== Cycle #54, Pumping Reagent USM (2) ===================
17-03-17 21:41:31.208 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:31.208 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.969015,
17-03-17 21:41:31.238 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:41:31.238 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:41:31.368 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:31.398 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:41:31.398 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:41:31.398 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:41:31.528 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:41:31.558 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:31.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 3 R1 1
17-03-17 21:41:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=1, R2=3, Total=4. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:41:31.988 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:32.018 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:32.018 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 21:41:32.018 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:41:33.238 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 21:41:33.238 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 21:41:33.238 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:41:33.258 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 21:41:33.258 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-17 21:41:33.258 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 21:41:33.408 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:41:33.428 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 21:41:33.428 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 21:41:33.478 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:41:33.498 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:41:33.498 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 21:41:33.598 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:41:33.598 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 21:41:33.598 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:33.628 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 21:41:33.628 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 21:41:33.628 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 21:41:33.758 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 21:41:33.798 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:34.668 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:34.698 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:34.698 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 21:41:34.698 -07 000000610 INF: =================== Cycle #54, Pumping Reagent PR2 (3) ===================
17-03-17 21:41:34.828 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:34.858 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:41:34.858 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:41:34.988 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 21:41:35.018 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:41:35.018 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:41:35.018 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 21:41:35.148 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 21:41:35.178 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:35.608 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:35.638 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:35.638 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 21:41:35.638 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:41:35.638 -07 000000480 INF: WaitCommand(10000) start
17-03-17 21:41:35.638 -07 000000627 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:41:35.638 -07 000000627 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 21:41:36.578 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.996267,
17-03-17 21:41:36.858 -07 000000627 INF: AsyncDelayTimer waited 1214ms
17-03-17 21:41:36.858 -07 000000627 INF: LanePump: Xmit /1?\r
17-03-17 21:41:36.888 -07 000000627 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 21:41:36.888 -07 000000627 INF: LanePump: Current Position of Pump is: 1110
17-03-17 21:41:36.898 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:41:37.018 -07 000000627 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 21:41:37.058 -07 000000627 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:38.588 -07 000000627 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:38.618 -07 000000627 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 21:41:39.038 -07 000000627 INF: LanePump: Xmit /1Q\r
17-03-17 21:41:39.068 -07 000000627 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 21:41:39.068 -07 000000627 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 21:41:39.068 -07 000000627 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 21:41:39.068 -07 000000627 INF: ===================  ===================
17-03-17 21:41:41.898 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:41:41.948 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.038479,
17-03-17 21:41:45.648 -07 000000480 INF: WaitCommand(10000) end
17-03-17 21:41:45.648 -07 000000610 INF: =================== Cycle #54, Imaging ===================
17-03-17 21:41:45.648 -07 000000610 INF: Imaging Cycle 54: ScanTilesCommand Cycle 54 time start.
17-03-17 21:41:45.648 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-17 21:41:45.648 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:41:45.678 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 21:41:45.678 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-17 21:41:45.678 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-17 21:41:45.978 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 21:41:45.998 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 21:41:45.998 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 21:41:46.048 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 21:41:46.068 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 21:41:46.068 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:41:46.068 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:41:46.068 -07 000000431 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-17 21:41:46.068 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:41:46.068 -07 000000431 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-17 21:41:46.068 -07 000000547 INF: FPGA: Recv EXLED1ON 
17-03-17 21:41:46.078 -07 000000431 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:41:46.078 -07 000000431 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-17 21:41:46.078 -07 000000438 INF: FPGA: Recv EXLED1ADCR 23160
17-03-17 21:41:46.088 -07 000000431 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:46.088 -07 000000431 INF: RedLED: Using Red data: Photodiode ADC 23160 --> 7.4 mW (old method), or 205.3 mW (new method). Difference = 197.8 mW
17-03-17 21:41:46.088 -07 000000431 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-17 21:41:46.088 -07 000000459 INF: FPGA: Recv EXLED1OFF 
17-03-17 21:41:46.098 -07 000000431 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:46.098 -07 000000431 INF: RedLED: LED was on for 19 ms
17-03-17 21:41:46.098 -07 000000431 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms.
17-03-17 21:41:46.098 -07 000000431 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-17 21:41:46.098 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:41:46.098 -07 000000431 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-17 21:41:46.098 -07 000000512 INF: FPGA: Recv EXLED2ON 
17-03-17 21:41:46.108 -07 000000431 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:41:46.108 -07 000000431 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 21:41:46.108 -07 000000438 INF: FPGA: Recv EXLED1ADCR 2097
17-03-17 21:41:46.118 -07 000000431 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:46.118 -07 000000431 INF: GreenLED: Using Green data: Photodiode ADC 2097 --> 0.9 mW (old method), or 182.2 mW (new method). Difference = 181.3 mW
17-03-17 21:41:46.118 -07 000000431 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-17 21:41:46.118 -07 000000480 INF: FPGA: Recv EXLED2OFF 
17-03-17 21:41:46.128 -07 000000431 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:46.128 -07 000000431 INF: GreenLED: LED was on for 19 ms
17-03-17 21:41:46.128 -07 000000431 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 27 ms.
17-03-17 21:41:46.128 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 21:41:46.128 -07 000000438 INF: FPGA: Recv EMCUR 
17-03-17 21:41:46.138 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:41:46.138 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-17 21:41:46.638 -07 000000012 INF: FPGA: Recv EMOUT
17-03-17 21:41:46.638 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 21:41:46.638 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-17 21:41:46.638 -07 000000429 INF: FPGA: Recv EMCUR 
17-03-17 21:41:46.648 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:41:46.648 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:41:46.648 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.127679074913452. ------
17-03-17 21:41:46.648 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:41:46.648 -07 000000459 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17953 mm
17-03-17 21:41:46.648 -07 000000459 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:41:46.658 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 21:41:46.658 -07 000000012 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm
17-03-17 21:41:46.658 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:46.658 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:41:46.658 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:41:46.658 -07 000000475 INF: Z Motor: Entering MoveAbsStepped (DAC = 39218, sync = True, waitForSettling = False)
17-03-17 21:41:46.658 -07 000000475 INF: Z Motor: Moving to -0.179528 mm, started at -0.127679 mm, distance = -51.85 um
17-03-17 21:41:46.658 -07 000000512 INF: FPGA: Recv YRDPOS 154379
17-03-17 21:41:46.668 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:46.668 -07 000000012 INF: Y Motor: Encoder = 154379 = motor step 120608.6 = 75.3804 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:46.668 -07 000000475 INF: FPGA: Xmit ZDACW 39218\n [Z Motor]
17-03-17 21:41:46.668 -07 000000012 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-17 21:41:46.668 -07 000000012 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 21:41:46.668 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:41:46.678 -07 000000547 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:41:46.678 -07 000000475 INF: FPGA: 'ZDACW 39218' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:41:46.688 -07 000000012 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 21:41:46.698 -07 000000475 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:41:46.698 -07 000000480 INF: FPGA: Recv ZDACR 39218
17-03-17 21:41:46.708 -07 000000475 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:41:46.708 -07 000000475 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-17 21:41:46.878 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:41:46.878 -07 000000547 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 220 ms overall
17-03-17 21:41:46.898 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:41:47.318 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.05619,
17-03-17 21:41:48.368 -07 000000431 INF: FPGA: Recv YMVTO 122703 24776
17-03-17 21:41:48.368 -07 000000012 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1675 ms to get response, and 1703 ms overall
17-03-17 21:41:48.368 -07 000000012 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 21:41:48.368 -07 000000012 INF: Y Motor: To move from 75.380 to 59.913 (-15.468 mm) should take 24748 steps, but required 24776 steps (15.485 mm). Slippage = 0.018 mm (0.00%).
17-03-17 21:41:48.368 -07 000000012 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1703 ms, distance = 15.468 mm, average velocity = 9.083 mm/sec
17-03-17 21:41:51.218 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:51.218 -07 000000576 INF: FPGA: Recv YRDPOS 122696
17-03-17 21:41:51.228 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:41:51.228 -07 000000012 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:51.248 -07 000000012 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:41:51.248 -07 000000012 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-17 21:41:51.248 -07 000000012 INF: Y Motor: Moved to 59.9102 after 4594 ms
17-03-17 21:41:51.248 -07 000000459 INF: Z Motor: EndOfMoveAbsStepped: target = -0.179528 mm (DAC = 39218)
17-03-17 21:41:51.248 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.258 -07 000000608 INF: FPGA: Recv ZSGSRD 37238
17-03-17 21:41:51.258 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:41:51.258 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.258 -07 000000480 INF: FPGA: Recv ZSGSRD 37233
17-03-17 21:41:51.268 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:41:51.268 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.268 -07 000000438 INF: FPGA: Recv ZSGSRD 37228
17-03-17 21:41:51.278 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.278 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.278 -07 000000431 INF: FPGA: Recv ZSGSRD 37234
17-03-17 21:41:51.288 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.288 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.288 -07 000000458 INF: FPGA: Recv ZSGSRD 37239
17-03-17 21:41:51.298 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.298 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.298 -07 000000512 INF: FPGA: Recv ZSGSRD 37232
17-03-17 21:41:51.308 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.308 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.308 -07 000000547 INF: FPGA: Recv ZSGSRD 37235
17-03-17 21:41:51.318 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.318 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.318 -07 000000576 INF: FPGA: Recv ZSGSRD 37237
17-03-17 21:41:51.328 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.328 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.328 -07 000000626 INF: FPGA: Recv ZSGSRD 37239
17-03-17 21:41:51.338 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.338 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:51.338 -07 000000480 INF: FPGA: Recv ZSGSRD 37233
17-03-17 21:41:51.348 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.348 -07 000000459 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:41:51.348 -07 000000012 INF: FPGA: Recv ZPIEZORD 33703
17-03-17 21:41:51.358 -07 000000459 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:51.358 -07 000000459 INF: Z Motor: Piezo is near 52.0 V (nominally 0 to 100 V), expect near 59.8 V, since DAC is at 5.984 V. Piezo Error = -7.8 V.
17-03-17 21:41:51.358 -07 000000459 INF: Z Motor: ReadAdcAverage: Commanded Z = -179.5 um, Read 10 ADC samples: Avg = 37235 (-178.6 uncal um), Error = 0.9 uncal um, Median = 37234 (-178.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37228 (-178.6 uncal um), Max = 37239 (-178.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:41:51.358 -07 000000459 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37235, posNoise = 4, negNoise = 7
17-03-17 21:41:51.358 -07 000000459 INF: Z Motor: After move to -0.179528, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:41:51.358 -07 000000459 INF: Z Motor: Settle wait time = 4596 ms, measure time = 104 ms (allowed 150 ms), total time = 4700 ms
17-03-17 21:41:51.358 -07 000000459 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:41:51.408 -07 000000459 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4751 ms
17-03-17 21:41:51.408 -07 000000459 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:41:51.408 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:41:51.408 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:41:51.408 -07 000000476 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:41:51.408 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:41:51.408 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:41:51.408 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:41:51.408 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:41:51.408 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 21:41:51.438 -07 000000626 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 21:41:51.438 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:41:51.438 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 21:41:51.438 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:41:51.448 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:41:51.448 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-17 21:41:51.458 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:41:51.498 -07 000000429 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:41:51.698 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:41:51.698 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:41:51.698 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:41:51.708 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) start.
17-03-17 21:41:51.738 -07 000000626 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:41:51.738 -07 000000438 INF: FPGA: Recv CAMSNAP
17-03-17 21:41:51.738 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 285 ms overall
17-03-17 21:41:51.828 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 618584024, 0x0, 559484976) end. Duration was 124 ms.
17-03-17 21:41:51.828 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:51.828 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:41:51.828 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms.
17-03-17 21:41:51.838 -07 000000608 INF: Image SNR check: start
17-03-17 21:41:51.838 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:41:51.838 -07 000000429 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:41:51.848 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:41:51.848 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:41:51.848 -07 000000608 INF: Image SNR check: pass  [peak (Max-Min)=59.19]
17-03-17 21:41:51.848 -07 000000608 INF: Autofocus start
17-03-17 21:41:51.848 -07 000000608 INF: MeasureProfile start
17-03-17 21:41:51.858 -07 000000608 INF: MeasureProfile done
17-03-17 21:41:51.868 -07 000000608 INF: X=0  Z correction [um]=-0.0713522
17-03-17 21:41:51.868 -07 000000608 INF: Autofocus finished
17-03-17 21:41:51.898 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:51.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:41:52.048 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:41:52.048 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 192 ms to get response, and 202 ms overall
17-03-17 21:41:52.048 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.179528891109604. ----------
17-03-17 21:41:52.048 -07 000000610 INF: Cycle	54	Tile	1	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:41:52.058 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37715, sync = True, waitForSettling = True)
17-03-17 21:41:52.058 -07 000000610 INF: Z Motor: Moving to -0.172648 mm, started at -0.179529 mm, distance = 6.88 um
17-03-17 21:41:52.058 -07 000000610 INF: FPGA: Xmit ZDACW 37715\n [Z Motor]
17-03-17 21:41:52.058 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:41:52.068 -07 000000610 INF: FPGA: 'ZDACW 37715' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.068 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:41:52.068 -07 000000480 INF: FPGA: Recv ZDACR 37715
17-03-17 21:41:52.078 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.078 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:41:52.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.228 -07 000000626 INF: FPGA: Recv ZSGSRD 36165
17-03-17 21:41:52.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:41:52.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.238 -07 000000429 INF: FPGA: Recv ZSGSRD 36163
17-03-17 21:41:52.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.248 -07 000000012 INF: FPGA: Recv ZSGSRD 36167
17-03-17 21:41:52.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.258 -07 000000476 INF: FPGA: Recv ZSGSRD 36163
17-03-17 21:41:52.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.268 -07 000000475 INF: FPGA: Recv ZSGSRD 36167
17-03-17 21:41:52.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.278 -07 000000431 INF: FPGA: Recv ZSGSRD 36169
17-03-17 21:41:52.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.288 -07 000000429 INF: FPGA: Recv ZSGSRD 36159
17-03-17 21:41:52.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.298 -07 000000569 INF: FPGA: Recv ZSGSRD 36167
17-03-17 21:41:52.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.308 -07 000000627 INF: FPGA: Recv ZSGSRD 36165
17-03-17 21:41:52.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:52.318 -07 000000424 INF: FPGA: Recv ZSGSRD 36166
17-03-17 21:41:52.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.328 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:41:52.328 -07 000000382 INF: FPGA: Recv ZPIEZORD 32295
17-03-17 21:41:52.338 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:52.338 -07 000000610 INF: Z Motor: Piezo is near 49.0 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.755 V. Piezo Error = -8.6 V.
17-03-17 21:41:52.338 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.6 um, Read 10 ADC samples: Avg = 36165 (-171.8 uncal um), Error = 0.9 uncal um, Median = 36166 (-171.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36159 (-171.7 uncal um), Max = 36169 (-171.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:41:52.338 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36165, posNoise = 4, negNoise = 6
17-03-17 21:41:52.338 -07 000000610 INF: Z Motor: After move to -0.172648, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:41:52.338 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 21:41:52.338 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:41:52.338 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:41:52.338 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:41:52.338 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:41:52.338 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:41:52.338 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:41:52.338 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:41:52.338 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:41:52.338 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:41:52.338 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:41:52.338 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:41:52.338 -07 000000424 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 21:41:52.348 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:41:52.348 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:41:52.358 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 21:41:52.358 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:41:52.368 -07 000000424 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms.
17-03-17 21:41:52.368 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:41:52.368 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:41:52.368 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:41:52.378 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 21:41:52.378 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms.
17-03-17 21:41:52.378 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37892 150\n [Camera]
17-03-17 21:41:52.578 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:41:52.688 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.023489,
17-03-17 21:41:53.018 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:41:53.018 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:41:53.018 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:41:53.028 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:41:53.028 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:41:53.028 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:41:53.028 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:41:53.028 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:41:53.028 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:41:53.028 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-17 21:41:53.208 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37892 822
17-03-17 21:41:53.358 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:41:53.408 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:41:53.418 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:41:53.418 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:53.418 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:41:53.418 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:41:53.418 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:53.418 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:41:53.418 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:41:53.428 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-17 21:41:53.428 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 21:41:53.568 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:41:53.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:41:53.568 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:41:53.678 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:41:53.678 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:41:53.678 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:41:53.678 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:41:53.678 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:41:53.688 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:41:53.688 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:41:53.758 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:41:53.768 -07 000000012 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:41:53.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37892 150' command took 2 ms to send, 1370 ms to get response, and 1383 ms overall
17-03-17 21:41:53.768 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172893
17-03-17 21:41:53.768 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17289 mm
17-03-17 21:41:53.768 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:41:53.768 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 21:41:53.768 -07 000000475 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-17 21:41:53.768 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:53.768 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37768, sync = True, waitForSettling = False)
17-03-17 21:41:53.768 -07 000000512 INF: Z Motor: Moving to -0.172891 mm, started at -0.172655 mm, distance = -0.24 um
17-03-17 21:41:53.768 -07 000000476 INF: FPGA: Recv YRDPOS 122696
17-03-17 21:41:53.778 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:41:53.778 -07 000000475 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:53.778 -07 000000475 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:41:53.778 -07 000000475 INF: Y Motor: Moving 1332 steps2
17-03-17 21:41:53.778 -07 000000512 INF: FPGA: Xmit ZDACW 37768\n [Z Motor]
17-03-17 21:41:53.778 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:41:53.788 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:41:53.788 -07 000000512 INF: FPGA: 'ZDACW 37768' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:41:53.798 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:41:53.798 -07 000000576 INF: FPGA: Recv ZDACR 37768
17-03-17 21:41:53.808 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:41:53.808 -07 000000512 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-17 21:41:54.078 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 401 ms.
17-03-17 21:41:54.078 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 21:41:54.078 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:54.078 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 396 ms.
17-03-17 21:41:54.078 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:41:54.078 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:54.088 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:41:54.088 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 514 ms.
17-03-17 21:41:54.088 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:41:54.098 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-17 21:41:54.158 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 21:41:54.158 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-17 21:41:54.188 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:54.198 -07 000000415 INF: FPGA: Recv YRDPOS 124380
17-03-17 21:41:54.208 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:41:54.208 -07 000000475 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:54.208 -07 000000475 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-17 21:41:54.208 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.145 mm/sec
17-03-17 21:41:55.158 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:55.158 -07 000000382 INF: FPGA: Recv YRDPOS 124380
17-03-17 21:41:55.168 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:41:55.168 -07 000000475 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:55.188 -07 000000475 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:41:55.188 -07 000000475 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:41:55.188 -07 000000475 INF: Y Motor: Moved to 60.7324 after 1420 ms (table move)
17-03-17 21:41:55.188 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172891 mm (DAC = 37768)
17-03-17 21:41:55.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.198 -07 000000501 INF: FPGA: Recv ZSGSRD 36201
17-03-17 21:41:55.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:41:55.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.198 -07 000000431 INF: FPGA: Recv ZSGSRD 36207
17-03-17 21:41:55.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.208 -07 000000547 INF: FPGA: Recv ZSGSRD 36211
17-03-17 21:41:55.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.218 -07 000000476 INF: FPGA: Recv ZSGSRD 36202
17-03-17 21:41:55.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.228 -07 000000627 INF: FPGA: Recv ZSGSRD 36206
17-03-17 21:41:55.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.238 -07 000000626 INF: FPGA: Recv ZSGSRD 36204
17-03-17 21:41:55.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.248 -07 000000012 INF: FPGA: Recv ZSGSRD 36198
17-03-17 21:41:55.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.268 -07 000000547 INF: FPGA: Recv ZSGSRD 36198
17-03-17 21:41:55.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.278 -07 000000459 INF: FPGA: Recv ZSGSRD 36215
17-03-17 21:41:55.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.288 -07 000000431 INF: FPGA: Recv ZSGSRD 36190
17-03-17 21:41:55.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.298 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:41:55.298 -07 000000512 INF: FPGA: Recv ZPIEZORD 32366
17-03-17 21:41:55.308 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.308 -07 000000610 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.763 V. Piezo Error = -8.5 V.
17-03-17 21:41:55.308 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.9 um, Read 10 ADC samples: Avg = 36203 (-172.0 uncal um), Error = 0.9 uncal um, Median = 36203 (-172.0 uncal um), StdDev = 7 (0.0 uncal um), Range = 25 (0.2 uncal um), Min = 36190 (-171.9 uncal um), Max = 36215 (-172.1 uncal um), Pos Noise = 12 (0.1 uncal um), Neg Noise = 13 (0.1 uncal um)
17-03-17 21:41:55.308 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36203, posNoise = 12, negNoise = 13
17-03-17 21:41:55.308 -07 000000610 INF: Z Motor: After move to -0.172891, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:41:55.308 -07 000000610 INF: Z Motor: Settle wait time = 1422 ms, measure time = 114 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:41:55.308 -07 000000610 INF: Z Motor: Waiting extra 36 ms after reading position to reach expected total of 150 ms
17-03-17 21:41:55.348 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1577 ms
17-03-17 21:41:55.348 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:41:55.348 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.172899104179307. ----------
17-03-17 21:41:55.348 -07 000000610 INF: Cycle	54	Tile	2	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:41:55.348 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37592, sync = True, waitForSettling = True)
17-03-17 21:41:55.348 -07 000000610 INF: Z Motor: Moving to -0.172085 mm, started at -0.172899 mm, distance = 0.81 um
17-03-17 21:41:55.348 -07 000000610 INF: FPGA: Xmit ZDACW 37592\n [Z Motor]
17-03-17 21:41:55.348 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:41:55.358 -07 000000610 INF: FPGA: 'ZDACW 37592' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:41:55.358 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:41:55.358 -07 000000480 INF: FPGA: Recv ZDACR 37592
17-03-17 21:41:55.368 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.368 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:41:55.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.518 -07 000000429 INF: FPGA: Recv ZSGSRD 36074
17-03-17 21:41:55.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:41:55.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.528 -07 000000424 INF: FPGA: Recv ZSGSRD 36086
17-03-17 21:41:55.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.538 -07 000000512 INF: FPGA: Recv ZSGSRD 36069
17-03-17 21:41:55.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.548 -07 000000569 INF: FPGA: Recv ZSGSRD 36071
17-03-17 21:41:55.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.558 -07 000000458 INF: FPGA: Recv ZSGSRD 36080
17-03-17 21:41:55.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.568 -07 000000476 INF: FPGA: Recv ZSGSRD 36080
17-03-17 21:41:55.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.578 -07 000000431 INF: FPGA: Recv ZSGSRD 36082
17-03-17 21:41:55.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.588 -07 000000626 INF: FPGA: Recv ZSGSRD 36068
17-03-17 21:41:55.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.598 -07 000000438 INF: FPGA: Recv ZSGSRD 36082
17-03-17 21:41:55.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:55.608 -07 000000608 INF: FPGA: Recv ZSGSRD 36087
17-03-17 21:41:55.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.618 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:41:55.618 -07 000000501 INF: FPGA: Recv ZPIEZORD 32204
17-03-17 21:41:55.628 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:55.628 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.736 V. Piezo Error = -8.6 V.
17-03-17 21:41:55.628 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36078 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36080 (-171.2 uncal um), StdDev = 7 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 36068 (-171.2 uncal um), Max = 36087 (-171.3 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:41:55.628 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36078, posNoise = 9, negNoise = 10
17-03-17 21:41:55.628 -07 000000610 INF: Z Motor: After move to -0.172085, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:41:55.628 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:41:55.628 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:41:55.628 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:41:55.628 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:41:55.628 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:41:55.628 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:41:55.628 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:41:55.628 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:41:55.628 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:41:55.628 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:41:55.628 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:41:55.628 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:41:55.628 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:41:55.638 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:41:55.638 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:41:55.638 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:41:55.638 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:41:55.648 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:41:55.648 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:41:55.648 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:41:55.648 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:41:55.658 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37768 150\n [Camera]
17-03-17 21:41:55.858 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:41:56.288 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:41:56.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:41:56.288 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:41:56.288 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:41:56.288 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:41:56.298 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:41:56.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:41:56.298 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:41:56.298 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:41:56.298 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:41:56.488 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37768 822
17-03-17 21:41:56.628 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:41:56.688 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 389 ms.
17-03-17 21:41:56.688 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:41:56.688 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:56.688 -07 000000458 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 395 ms.
17-03-17 21:41:56.688 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:41:56.688 -07 000000458 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:41:56.688 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:56.688 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:41:56.688 -07 000000458 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:41:56.698 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:41:56.848 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:41:56.848 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:41:56.848 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:41:56.848 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:41:56.848 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:41:56.848 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:41:56.848 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:41:56.848 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:41:56.848 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:41:56.848 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:41:56.898 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:41:56.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:41:57.038 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:41:57.038 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:41:57.038 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37768 150' command took 2 ms to send, 1372 ms to get response, and 1382 ms overall
17-03-17 21:41:57.038 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:41:57.038 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.732421875, Z-Position -0.172096077661587. ------
17-03-17 21:41:57.038 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:41:57.038 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17834 mm
17-03-17 21:41:57.038 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:41:57.048 -07 000000458 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:41:57.048 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:41:57.048 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 38959, sync = True, waitForSettling = False)
17-03-17 21:41:57.048 -07 000000431 INF: Z Motor: Moving to -0.178343 mm, started at -0.172096 mm, distance = -6.25 um
17-03-17 21:41:57.048 -07 000000476 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:41:57.048 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 21:41:57.048 -07 000000475 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-17 21:41:57.058 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:57.058 -07 000000458 INF: FPGA: Recv YRDPOS 124381
17-03-17 21:41:57.068 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:41:57.068 -07 000000475 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:57.068 -07 000000431 INF: FPGA: Xmit ZDACW 38959\n [Z Motor]
17-03-17 21:41:57.068 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:41:57.068 -07 000000475 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:41:57.068 -07 000000475 INF: Y Motor: Moving 1344 steps-21
17-03-17 21:41:57.078 -07 000000431 INF: FPGA: 'ZDACW 38959' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 21:41:57.078 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:41:57.078 -07 000000382 INF: FPGA: Recv ZDACR 38959
17-03-17 21:41:57.088 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:57.088 -07 000000431 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-17 21:41:57.088 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:41:57.248 -07 000000429 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:41:57.248 -07 000000476 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-17 21:41:57.248 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 402 ms.
17-03-17 21:41:57.248 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:41:57.248 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:57.248 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 405 ms.
17-03-17 21:41:57.248 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 21:41:57.248 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:57.258 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:41:57.258 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 21:41:57.258 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-17 21:41:57.268 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms.
17-03-17 21:41:57.458 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:41:57.458 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall
17-03-17 21:41:57.498 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:57.508 -07 000000626 INF: FPGA: Recv YRDPOS 126081
17-03-17 21:41:57.508 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:41:57.508 -07 000000475 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:57.508 -07 000000475 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 21:41:57.508 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.840 mm, average velocity = 2.122 mm/sec
17-03-17 21:41:58.058 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.973092,
17-03-17 21:41:58.458 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:41:58.458 -07 000000547 INF: FPGA: Recv YRDPOS 126081
17-03-17 21:41:58.468 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.468 -07 000000475 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:41:58.488 -07 000000475 INF: Y Motor: After move to 61.572609, error = -0.009621, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:41:58.488 -07 000000475 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:41:58.488 -07 000000475 INF: Y Motor: Moved to 61.5630 after 1441 ms (table move)
17-03-17 21:41:58.488 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178343 mm (DAC = 38959)
17-03-17 21:41:58.488 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.498 -07 000000424 INF: FPGA: Recv ZSGSRD 37053
17-03-17 21:41:58.498 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:41:58.498 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.498 -07 000000608 INF: FPGA: Recv ZSGSRD 37047
17-03-17 21:41:58.508 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:41:58.508 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.508 -07 000000480 INF: FPGA: Recv ZSGSRD 37051
17-03-17 21:41:58.518 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.518 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.518 -07 000000012 INF: FPGA: Recv ZSGSRD 37058
17-03-17 21:41:58.528 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.528 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.528 -07 000000382 INF: FPGA: Recv ZSGSRD 37055
17-03-17 21:41:58.538 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.538 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.538 -07 000000431 INF: FPGA: Recv ZSGSRD 37047
17-03-17 21:41:58.548 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.548 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.548 -07 000000627 INF: FPGA: Recv ZSGSRD 37051
17-03-17 21:41:58.558 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.558 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.558 -07 000000475 INF: FPGA: Recv ZSGSRD 37051
17-03-17 21:41:58.568 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.568 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.568 -07 000000012 INF: FPGA: Recv ZSGSRD 37054
17-03-17 21:41:58.578 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.578 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:58.578 -07 000000459 INF: FPGA: Recv ZSGSRD 37055
17-03-17 21:41:58.588 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.588 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:41:58.588 -07 000000576 INF: FPGA: Recv ZPIEZORD 33499
17-03-17 21:41:58.598 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:58.598 -07 000000512 INF: Z Motor: Piezo is near 51.6 V (nominally 0 to 100 V), expect near 59.4 V, since DAC is at 5.945 V. Piezo Error = -7.9 V.
17-03-17 21:41:58.598 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.3 um, Read 10 ADC samples: Avg = 37052 (-177.5 uncal um), Error = 0.9 uncal um, Median = 37052 (-177.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37047 (-177.4 uncal um), Max = 37058 (-177.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:41:58.598 -07 000000512 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37052, posNoise = 6, negNoise = 5
17-03-17 21:41:58.598 -07 000000512 INF: Z Motor: After move to -0.178343, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:41:58.598 -07 000000512 INF: Z Motor: Settle wait time = 1445 ms, measure time = 103 ms (allowed 150 ms), total time = 1548 ms
17-03-17 21:41:58.598 -07 000000512 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:41:58.648 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-17 21:41:58.648 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:41:58.648 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:41:58.648 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:41:58.648 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:41:58.648 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:41:58.648 -07 000000012 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:41:58.648 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:41:58.648 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:41:58.648 -07 000000012 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:41:58.658 -07 000000012 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 21:41:58.658 -07 000000012 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:41:58.668 -07 000000012 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 21:41:58.668 -07 000000012 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-17 21:41:58.668 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:41:58.718 -07 000000458 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:41:58.918 -07 000000475 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:41:58.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:41:58.918 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:41:58.918 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2199785120, 0x0, 559484976) start.
17-03-17 21:41:58.958 -07 000000012 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:41:58.958 -07 000000415 INF: FPGA: Recv CAMSNAP
17-03-17 21:41:58.958 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 283 ms to get response, and 285 ms overall
17-03-17 21:41:59.048 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2199785120, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 21:41:59.048 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:41:59.048 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:41:59.048 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:41:59.058 -07 000000438 INF: Autofocus start
17-03-17 21:41:59.058 -07 000000438 INF: MeasureProfile start
17-03-17 21:41:59.058 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:41:59.058 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:41:59.068 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:41:59.068 -07 000000475 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:41:59.068 -07 000000438 INF: MeasureProfile done
17-03-17 21:41:59.068 -07 000000438 INF: X=64  Z correction [um]=0.2557664
17-03-17 21:41:59.068 -07 000000438 INF: Autofocus finished
17-03-17 21:41:59.268 -07 000000547 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:41:59.268 -07 000000475 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:41:59.388 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56298828125, Z-position -0.178353260287662. ----------
17-03-17 21:41:59.388 -07 000000610 INF: Cycle	54	Tile	3	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:41:59.388 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37527, sync = True, waitForSettling = True)
17-03-17 21:41:59.388 -07 000000610 INF: Z Motor: Moving to -0.171788 mm, started at -0.178353 mm, distance = 6.57 um
17-03-17 21:41:59.388 -07 000000610 INF: FPGA: Xmit ZDACW 37527\n [Z Motor]
17-03-17 21:41:59.388 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:41:59.398 -07 000000610 INF: FPGA: 'ZDACW 37527' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:41:59.398 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:41:59.398 -07 000000475 INF: FPGA: Recv ZDACR 37527
17-03-17 21:41:59.408 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.408 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:41:59.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.558 -07 000000480 INF: FPGA: Recv ZSGSRD 36033
17-03-17 21:41:59.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:41:59.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.568 -07 000000438 INF: FPGA: Recv ZSGSRD 36033
17-03-17 21:41:59.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.578 -07 000000476 INF: FPGA: Recv ZSGSRD 36034
17-03-17 21:41:59.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.588 -07 000000424 INF: FPGA: Recv ZSGSRD 36028
17-03-17 21:41:59.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.598 -07 000000012 INF: FPGA: Recv ZSGSRD 36030
17-03-17 21:41:59.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.608 -07 000000547 INF: FPGA: Recv ZSGSRD 36037
17-03-17 21:41:59.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.618 -07 000000626 INF: FPGA: Recv ZSGSRD 36032
17-03-17 21:41:59.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.628 -07 000000501 INF: FPGA: Recv ZSGSRD 36025
17-03-17 21:41:59.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.638 -07 000000382 INF: FPGA: Recv ZSGSRD 36031
17-03-17 21:41:59.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:41:59.648 -07 000000475 INF: FPGA: Recv ZSGSRD 36035
17-03-17 21:41:59.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.658 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:41:59.658 -07 000000480 INF: FPGA: Recv ZPIEZORD 32164
17-03-17 21:41:59.668 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:41:59.668 -07 000000610 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.726 V. Piezo Error = -8.6 V.
17-03-17 21:41:59.668 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36032 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36032 (-170.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36025 (-170.9 uncal um), Max = 36037 (-171.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:41:59.668 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36032, posNoise = 5, negNoise = 7
17-03-17 21:41:59.668 -07 000000610 INF: Z Motor: After move to -0.171788, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:41:59.668 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:41:59.668 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:41:59.668 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:41:59.668 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:41:59.668 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:41:59.668 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:41:59.668 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:41:59.668 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:41:59.668 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:41:59.668 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:41:59.668 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:41:59.668 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:41:59.668 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:41:59.678 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:41:59.678 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:41:59.678 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:41:59.678 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:41:59.688 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:41:59.688 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:41:59.688 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:41:59.688 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:41:59.688 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37704 150\n [Camera]
17-03-17 21:41:59.888 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:00.328 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:00.328 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:00.328 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:00.328 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:00.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:00.328 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:00.328 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:00.328 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:42:00.328 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:00.328 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:42:00.518 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37704 822
17-03-17 21:42:00.668 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:00.708 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:42:00.708 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:42:00.708 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:00.708 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 21:42:00.708 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-17 21:42:00.708 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:00.708 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:00.708 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:00.708 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:42:00.718 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:42:00.878 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:00.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:00.878 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:00.878 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:00.878 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:00.878 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:42:00.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:00.878 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:00.878 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:00.878 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:42:01.068 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:01.068 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:01.068 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37704 150' command took 2 ms to send, 1375 ms to get response, and 1381 ms overall
17-03-17 21:42:01.068 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.172111
17-03-17 21:42:01.068 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17211 mm
17-03-17 21:42:01.068 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:01.068 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 21:42:01.068 -07 000000547 INF: Y Motor: Moving to 62.4026 mm, started at 61.5630 mm, delta = 0.8396 mm
17-03-17 21:42:01.188 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:01.188 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 37598, sync = True, waitForSettling = False)
17-03-17 21:42:01.188 -07 000000429 INF: Z Motor: Moving to -0.172113 mm, started at -0.171801 mm, distance = -0.31 um
17-03-17 21:42:01.188 -07 000000431 INF: FPGA: Recv YRDPOS 126082
17-03-17 21:42:01.198 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:01.198 -07 000000547 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:01.198 -07 000000429 INF: FPGA: Xmit ZDACW 37598\n [Z Motor]
17-03-17 21:42:01.198 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:42:01.198 -07 000000547 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:01.198 -07 000000547 INF: Y Motor: Moving 1343 steps-20
17-03-17 21:42:01.208 -07 000000429 INF: FPGA: 'ZDACW 37598' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:42:01.208 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:01.208 -07 000000431 INF: FPGA: Recv ZDACR 37598
17-03-17 21:42:01.218 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:01.218 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:01.218 -07 000000429 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-17 21:42:01.258 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:42:01.258 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:42:01.258 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:01.258 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:01.268 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:42:01.268 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:42:01.268 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:01.268 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:01.268 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:42:01.268 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:42:01.588 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 21:42:01.588 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-17 21:42:01.628 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:01.628 -07 000000576 INF: FPGA: Recv YRDPOS 127785
17-03-17 21:42:01.638 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:01.638 -07 000000547 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:01.638 -07 000000547 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 21:42:01.638 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.840 mm, average velocity = 2.126 mm/sec
17-03-17 21:42:01.898 -07 000000459 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:01.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:02.588 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:02.588 -07 000000458 INF: FPGA: Recv YRDPOS 127785
17-03-17 21:42:02.598 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.598 -07 000000547 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:02.618 -07 000000547 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:02.618 -07 000000547 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:02.618 -07 000000547 INF: Y Motor: Moved to 62.3950 after 1544 ms (table move)
17-03-17 21:42:02.618 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172113 mm (DAC = 37598)
17-03-17 21:42:02.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.618 -07 000000627 INF: FPGA: Recv ZSGSRD 36086
17-03-17 21:42:02.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:02.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.628 -07 000000431 INF: FPGA: Recv ZSGSRD 36077
17-03-17 21:42:02.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.638 -07 000000626 INF: FPGA: Recv ZSGSRD 36087
17-03-17 21:42:02.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.648 -07 000000501 INF: FPGA: Recv ZSGSRD 36083
17-03-17 21:42:02.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.658 -07 000000012 INF: FPGA: Recv ZSGSRD 36084
17-03-17 21:42:02.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.668 -07 000000415 INF: FPGA: Recv ZSGSRD 36087
17-03-17 21:42:02.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.678 -07 000000424 INF: FPGA: Recv ZSGSRD 36077
17-03-17 21:42:02.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.688 -07 000000627 INF: FPGA: Recv ZSGSRD 36077
17-03-17 21:42:02.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.698 -07 000000431 INF: FPGA: Recv ZSGSRD 36079
17-03-17 21:42:02.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.708 -07 000000576 INF: FPGA: Recv ZSGSRD 36086
17-03-17 21:42:02.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.718 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:02.718 -07 000000476 INF: FPGA: Recv ZPIEZORD 32223
17-03-17 21:42:02.728 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.728 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.737 V. Piezo Error = -8.5 V.
17-03-17 21:42:02.728 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.1 um, Read 10 ADC samples: Avg = 36082 (-171.2 uncal um), Error = 0.9 uncal um, Median = 36084 (-171.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36077 (-171.2 uncal um), Max = 36087 (-171.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:42:02.728 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36082, posNoise = 5, negNoise = 5
17-03-17 21:42:02.728 -07 000000610 INF: Z Motor: After move to -0.172113, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:02.728 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 105 ms (allowed 150 ms), total time = 1535 ms
17-03-17 21:42:02.728 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:02.778 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1702 ms
17-03-17 21:42:02.778 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:02.778 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.172121774510154. ----------
17-03-17 21:42:02.778 -07 000000610 INF: Cycle	54	Tile	4	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:02.778 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37421, sync = True, waitForSettling = True)
17-03-17 21:42:02.778 -07 000000610 INF: Z Motor: Moving to -0.171302 mm, started at -0.172122 mm, distance = 0.82 um
17-03-17 21:42:02.778 -07 000000610 INF: FPGA: Xmit ZDACW 37421\n [Z Motor]
17-03-17 21:42:02.778 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 21:42:02.788 -07 000000610 INF: FPGA: 'ZDACW 37421' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:02.788 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:02.788 -07 000000626 INF: FPGA: Recv ZDACR 37421
17-03-17 21:42:02.798 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.798 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:02.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.948 -07 000000459 INF: FPGA: Recv ZSGSRD 35960
17-03-17 21:42:02.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:02.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.958 -07 000000012 INF: FPGA: Recv ZSGSRD 35957
17-03-17 21:42:02.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.968 -07 000000569 INF: FPGA: Recv ZSGSRD 35959
17-03-17 21:42:02.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.978 -07 000000608 INF: FPGA: Recv ZSGSRD 35960
17-03-17 21:42:02.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.988 -07 000000627 INF: FPGA: Recv ZSGSRD 35960
17-03-17 21:42:02.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:02.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:02.998 -07 000000424 INF: FPGA: Recv ZSGSRD 35957
17-03-17 21:42:03.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:03.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:03.008 -07 000000512 INF: FPGA: Recv ZSGSRD 35956
17-03-17 21:42:03.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:03.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:03.018 -07 000000569 INF: FPGA: Recv ZSGSRD 35953
17-03-17 21:42:03.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:03.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:03.028 -07 000000438 INF: FPGA: Recv ZSGSRD 35954
17-03-17 21:42:03.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:03.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:03.038 -07 000000429 INF: FPGA: Recv ZSGSRD 35954
17-03-17 21:42:03.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:03.048 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:03.048 -07 000000459 INF: FPGA: Recv ZPIEZORD 32073
17-03-17 21:42:03.058 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:03.058 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.710 V. Piezo Error = -8.6 V.
17-03-17 21:42:03.058 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35957 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35957 (-170.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35953 (-170.4 uncal um), Max = 35960 (-170.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:42:03.058 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35957, posNoise = 3, negNoise = 4
17-03-17 21:42:03.058 -07 000000610 INF: Z Motor: After move to -0.171302, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:03.058 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:42:03.058 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:03.058 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:03.058 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:03.058 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:03.058 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:03.058 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:03.058 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:03.058 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:03.058 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:03.058 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:03.058 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:03.058 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:03.068 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:42:03.068 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:03.068 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:03.068 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:03.068 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:42:03.068 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 21:42:03.078 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:42:03.078 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:42:03.078 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37598 150\n [Camera]
17-03-17 21:42:03.278 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:03.428 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.966297,
17-03-17 21:42:03.708 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:03.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:03.718 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:03.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:03.718 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:03.718 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:03.718 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:03.718 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:42:03.718 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:03.718 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:42:03.908 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37598 822
17-03-17 21:42:04.058 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:04.108 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:42:04.108 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:42:04.108 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:04.108 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 390 ms.
17-03-17 21:42:04.108 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:42:04.108 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:04.108 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:42:04.108 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:42:04.118 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 9 ms.
17-03-17 21:42:04.128 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-17 21:42:04.268 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:04.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:04.268 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:04.268 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:04.268 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:42:04.268 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:04.268 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:04.268 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:04.268 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:04.268 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:42:04.458 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:04.458 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:04.458 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37598 150' command took 2 ms to send, 1373 ms to get response, and 1381 ms overall
17-03-17 21:42:04.458 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171877
17-03-17 21:42:04.458 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17188 mm
17-03-17 21:42:04.458 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:04.458 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 21:42:04.468 -07 000000608 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-17 21:42:04.468 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:04.468 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 37547, sync = True, waitForSettling = False)
17-03-17 21:42:04.468 -07 000000431 INF: Z Motor: Moving to -0.171879 mm, started at -0.171319 mm, distance = -0.56 um
17-03-17 21:42:04.468 -07 000000458 INF: FPGA: Recv YRDPOS 127785
17-03-17 21:42:04.478 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:04.478 -07 000000608 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:04.478 -07 000000608 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:04.478 -07 000000608 INF: Y Motor: Moving 1340 steps-16
17-03-17 21:42:04.478 -07 000000431 INF: FPGA: Xmit ZDACW 37547\n [Z Motor]
17-03-17 21:42:04.478 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:42:04.488 -07 000000431 INF: FPGA: 'ZDACW 37547' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:42:04.488 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:04.488 -07 000000480 INF: FPGA: Recv ZDACR 37547
17-03-17 21:42:04.498 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:04.498 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:04.498 -07 000000431 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 21:42:04.658 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 21:42:04.658 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:42:04.658 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:04.658 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 21:42:04.658 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:42:04.658 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:04.658 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:04.658 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:42:04.658 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:04.668 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 21:42:04.868 -07 000000459 INF: FPGA: Recv YMVTILE
17-03-17 21:42:04.868 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:42:04.908 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:04.918 -07 000000424 INF: FPGA: Recv YRDPOS 129482
17-03-17 21:42:04.918 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:42:04.918 -07 000000608 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:04.918 -07 000000608 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 21:42:04.918 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.110 mm/sec
17-03-17 21:42:05.868 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:05.868 -07 000000382 INF: FPGA: Recv YRDPOS 129482
17-03-17 21:42:05.878 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:05.878 -07 000000608 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:05.898 -07 000000608 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:05.898 -07 000000608 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:05.898 -07 000000608 INF: Y Motor: Moved to 63.2236 after 1433 ms (table move)
17-03-17 21:42:05.898 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171879 mm (DAC = 37547)
17-03-17 21:42:05.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.898 -07 000000476 INF: FPGA: Recv ZSGSRD 36047
17-03-17 21:42:05.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:05.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.908 -07 000000569 INF: FPGA: Recv ZSGSRD 36045
17-03-17 21:42:05.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.918 -07 000000501 INF: FPGA: Recv ZSGSRD 36043
17-03-17 21:42:05.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.928 -07 000000459 INF: FPGA: Recv ZSGSRD 36041
17-03-17 21:42:05.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.938 -07 000000012 INF: FPGA: Recv ZSGSRD 36052
17-03-17 21:42:05.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.948 -07 000000626 INF: FPGA: Recv ZSGSRD 36048
17-03-17 21:42:05.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.958 -07 000000480 INF: FPGA: Recv ZSGSRD 36050
17-03-17 21:42:05.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.968 -07 000000475 INF: FPGA: Recv ZSGSRD 36042
17-03-17 21:42:05.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.978 -07 000000431 INF: FPGA: Recv ZSGSRD 36042
17-03-17 21:42:05.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:05.988 -07 000000576 INF: FPGA: Recv ZSGSRD 36043
17-03-17 21:42:05.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:05.998 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:05.998 -07 000000476 INF: FPGA: Recv ZPIEZORD 32153
17-03-17 21:42:06.008 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.008 -07 000000610 INF: Z Motor: Piezo is near 48.7 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.729 V. Piezo Error = -8.6 V.
17-03-17 21:42:06.008 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36045 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36044 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36041 (-171.0 uncal um), Max = 36052 (-171.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:42:06.008 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36045, posNoise = 7, negNoise = 4
17-03-17 21:42:06.008 -07 000000610 INF: Z Motor: After move to -0.171879, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:06.008 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 104 ms (allowed 150 ms), total time = 1539 ms
17-03-17 21:42:06.008 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:06.058 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-17 21:42:06.058 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:06.058 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.171884078660909. ----------
17-03-17 21:42:06.058 -07 000000610 INF: Cycle	54	Tile	5	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:06.058 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37370, sync = True, waitForSettling = True)
17-03-17 21:42:06.058 -07 000000610 INF: Z Motor: Moving to -0.171069 mm, started at -0.171884 mm, distance = 0.82 um
17-03-17 21:42:06.058 -07 000000610 INF: FPGA: Xmit ZDACW 37370\n [Z Motor]
17-03-17 21:42:06.058 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 21:42:06.068 -07 000000610 INF: FPGA: 'ZDACW 37370' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:06.068 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:06.068 -07 000000458 INF: FPGA: Recv ZDACR 37370
17-03-17 21:42:06.078 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.078 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:06.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.228 -07 000000626 INF: FPGA: Recv ZSGSRD 35922
17-03-17 21:42:06.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:06.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.238 -07 000000576 INF: FPGA: Recv ZSGSRD 35924
17-03-17 21:42:06.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.248 -07 000000476 INF: FPGA: Recv ZSGSRD 35922
17-03-17 21:42:06.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.258 -07 000000480 INF: FPGA: Recv ZSGSRD 35923
17-03-17 21:42:06.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.268 -07 000000012 INF: FPGA: Recv ZSGSRD 35926
17-03-17 21:42:06.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.278 -07 000000626 INF: FPGA: Recv ZSGSRD 35925
17-03-17 21:42:06.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.288 -07 000000569 INF: FPGA: Recv ZSGSRD 35916
17-03-17 21:42:06.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.298 -07 000000429 INF: FPGA: Recv ZSGSRD 35916
17-03-17 21:42:06.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.308 -07 000000569 INF: FPGA: Recv ZSGSRD 35921
17-03-17 21:42:06.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:06.318 -07 000000424 INF: FPGA: Recv ZSGSRD 35923
17-03-17 21:42:06.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.328 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:06.328 -07 000000415 INF: FPGA: Recv ZPIEZORD 31983
17-03-17 21:42:06.338 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:06.338 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.702 V. Piezo Error = -8.7 V.
17-03-17 21:42:06.338 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35922 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35922 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35916 (-170.2 uncal um), Max = 35926 (-170.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:06.338 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35922, posNoise = 4, negNoise = 6
17-03-17 21:42:06.338 -07 000000610 INF: Z Motor: After move to -0.171069, error = -0.000025, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:06.338 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:42:06.338 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:06.338 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:06.338 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:06.338 -07 000000476 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:06.338 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:06.338 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:06.338 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:06.338 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:06.338 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:06.338 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:06.338 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:06.338 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:06.348 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:06.348 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:06.348 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:06.348 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:06.358 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 21:42:06.358 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:42:06.358 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:42:06.358 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:42:06.358 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37547 150\n [Camera]
17-03-17 21:42:06.558 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:06.898 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:06.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:06.998 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:06.998 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:06.998 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:06.998 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:06.998 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:42:06.998 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:06.998 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:06.998 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:06.998 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:06.998 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:42:07.188 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37547 823
17-03-17 21:42:07.348 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:07.378 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:42:07.378 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:42:07.378 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:07.378 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:42:07.378 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:42:07.378 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:07.378 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:07.378 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:42:07.388 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:07.388 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:42:07.548 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:07.548 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:07.548 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:07.548 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:07.548 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:42:07.558 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:07.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:07.558 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:07.558 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:07.558 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:42:07.748 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1376
17-03-17 21:42:07.748 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:07.748 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37547 150' command took 2 ms to send, 1371 ms to get response, and 1383 ms overall
17-03-17 21:42:07.748 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.171431
17-03-17 21:42:07.748 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17143 mm
17-03-17 21:42:07.748 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:07.748 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 21:42:07.748 -07 000000382 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-17 21:42:07.748 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:07.748 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 37449, sync = True, waitForSettling = False)
17-03-17 21:42:07.748 -07 000000547 INF: Z Motor: Moving to -0.171431 mm, started at -0.171094 mm, distance = -0.34 um
17-03-17 21:42:07.748 -07 000000429 INF: FPGA: Recv YRDPOS 129482
17-03-17 21:42:07.758 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:07.758 -07 000000382 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:07.758 -07 000000382 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:07.758 -07 000000382 INF: Y Motor: Moving 1342 steps-18
17-03-17 21:42:07.758 -07 000000547 INF: FPGA: Xmit ZDACW 37449\n [Z Motor]
17-03-17 21:42:07.758 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:42:07.768 -07 000000547 INF: FPGA: 'ZDACW 37449' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:42:07.768 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:07.778 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:07.778 -07 000000424 INF: FPGA: Recv ZDACR 37449
17-03-17 21:42:07.788 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:42:07.788 -07 000000547 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-17 21:42:07.958 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 404 ms.
17-03-17 21:42:07.958 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 21:42:07.958 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:07.958 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 403 ms.
17-03-17 21:42:07.958 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-17 21:42:07.958 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:07.968 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 21:42:07.968 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-17 21:42:07.968 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 21:42:07.978 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 427 ms.
17-03-17 21:42:08.148 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:42:08.148 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 389 ms overall
17-03-17 21:42:08.178 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:08.188 -07 000000576 INF: FPGA: Recv YRDPOS 131187
17-03-17 21:42:08.188 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:42:08.188 -07 000000382 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:08.188 -07 000000382 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-17 21:42:08.188 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.839 mm, average velocity = 2.151 mm/sec
17-03-17 21:42:08.798 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.978563,
17-03-17 21:42:09.138 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:09.138 -07 000000576 INF: FPGA: Recv YRDPOS 131188
17-03-17 21:42:09.148 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.148 -07 000000382 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:09.168 -07 000000382 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:09.168 -07 000000382 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:42:09.168 -07 000000382 INF: Y Motor: Moved to 64.0566 after 1418 ms (table move)
17-03-17 21:42:09.168 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171431 mm (DAC = 37449)
17-03-17 21:42:09.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.168 -07 000000431 INF: FPGA: Recv ZSGSRD 35978
17-03-17 21:42:09.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:09.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.178 -07 000000475 INF: FPGA: Recv ZSGSRD 35975
17-03-17 21:42:09.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.188 -07 000000627 INF: FPGA: Recv ZSGSRD 35981
17-03-17 21:42:09.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.198 -07 000000458 INF: FPGA: Recv ZSGSRD 35967
17-03-17 21:42:09.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.208 -07 000000459 INF: FPGA: Recv ZSGSRD 35970
17-03-17 21:42:09.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.218 -07 000000431 INF: FPGA: Recv ZSGSRD 35975
17-03-17 21:42:09.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.228 -07 000000576 INF: FPGA: Recv ZSGSRD 35975
17-03-17 21:42:09.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.238 -07 000000429 INF: FPGA: Recv ZSGSRD 35982
17-03-17 21:42:09.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.248 -07 000000480 INF: FPGA: Recv ZSGSRD 35979
17-03-17 21:42:09.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.258 -07 000000382 INF: FPGA: Recv ZSGSRD 35983
17-03-17 21:42:09.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.268 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:09.268 -07 000000424 INF: FPGA: Recv ZPIEZORD 32078
17-03-17 21:42:09.278 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.278 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.714 V. Piezo Error = -8.6 V.
17-03-17 21:42:09.278 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35976 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35976 (-170.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35967 (-170.5 uncal um), Max = 35983 (-170.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:42:09.278 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35976, posNoise = 7, negNoise = 9
17-03-17 21:42:09.278 -07 000000610 INF: Z Motor: After move to -0.171431, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:09.278 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 104 ms (allowed 150 ms), total time = 1523 ms
17-03-17 21:42:09.278 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:09.328 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-17 21:42:09.328 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:09.328 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.171440808023127. ----------
17-03-17 21:42:09.328 -07 000000610 INF: Cycle	54	Tile	6	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:09.328 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37272, sync = True, waitForSettling = True)
17-03-17 21:42:09.328 -07 000000610 INF: Z Motor: Moving to -0.170620 mm, started at -0.171441 mm, distance = 0.82 um
17-03-17 21:42:09.328 -07 000000610 INF: FPGA: Xmit ZDACW 37272\n [Z Motor]
17-03-17 21:42:09.328 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:42:09.338 -07 000000610 INF: FPGA: 'ZDACW 37272' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:42:09.338 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:09.338 -07 000000627 INF: FPGA: Recv ZDACR 37272
17-03-17 21:42:09.348 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.348 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:09.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.498 -07 000000012 INF: FPGA: Recv ZSGSRD 35849
17-03-17 21:42:09.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:09.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.508 -07 000000501 INF: FPGA: Recv ZSGSRD 35856
17-03-17 21:42:09.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.518 -07 000000547 INF: FPGA: Recv ZSGSRD 35849
17-03-17 21:42:09.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.528 -07 000000608 INF: FPGA: Recv ZSGSRD 35848
17-03-17 21:42:09.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.538 -07 000000459 INF: FPGA: Recv ZSGSRD 35849
17-03-17 21:42:09.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.548 -07 000000012 INF: FPGA: Recv ZSGSRD 35851
17-03-17 21:42:09.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.558 -07 000000501 INF: FPGA: Recv ZSGSRD 35855
17-03-17 21:42:09.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.568 -07 000000627 INF: FPGA: Recv ZSGSRD 35850
17-03-17 21:42:09.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.578 -07 000000480 INF: FPGA: Recv ZSGSRD 35849
17-03-17 21:42:09.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:09.588 -07 000000459 INF: FPGA: Recv ZSGSRD 35849
17-03-17 21:42:09.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:09.598 -07 000000458 INF: FPGA: Recv ZPIEZORD 31914
17-03-17 21:42:09.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:09.608 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.687 V. Piezo Error = -8.7 V.
17-03-17 21:42:09.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35850 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35849 (-169.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35848 (-169.7 uncal um), Max = 35856 (-169.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 21:42:09.608 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35850, posNoise = 6, negNoise = 2
17-03-17 21:42:09.608 -07 000000610 INF: Z Motor: After move to -0.170620, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:09.608 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:42:09.608 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:09.608 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:09.608 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:09.608 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:09.608 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:09.608 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:09.618 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:09.618 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:09.618 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:42:09.618 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:09.618 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:09.618 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:09.618 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:42:09.618 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:09.618 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:09.618 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:09.628 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-17 21:42:09.628 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 21:42:09.628 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:42:09.628 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:42:09.638 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37449 150\n [Camera]
17-03-17 21:42:09.838 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:10.268 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:10.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:10.268 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:10.268 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:10.268 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 21:42:10.278 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:10.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:10.278 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:10.278 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:10.278 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 21:42:10.468 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37449 822
17-03-17 21:42:10.608 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:10.648 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:42:10.648 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:42:10.648 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:10.648 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:42:10.648 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:42:10.648 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:10.648 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:10.658 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:10.658 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:42:10.658 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:42:10.828 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:10.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:10.828 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:10.828 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:10.828 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 21:42:10.828 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:10.828 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:10.828 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:10.828 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:10.828 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:42:11.018 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:11.018 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:11.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37449 150' command took 2 ms to send, 1372 ms to get response, and 1381 ms overall
17-03-17 21:42:11.018 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:42:11.018 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.056640625, Z-Position -0.170631357293265. ------
17-03-17 21:42:11.018 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:11.018 -07 000000424 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17716 mm
17-03-17 21:42:11.018 -07 000000424 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:11.028 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:11.028 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:11.028 -07 000000438 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:42:11.028 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 21:42:11.028 -07 000000480 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-17 21:42:11.028 -07 000000475 INF: Z Motor: Entering MoveAbsStepped (DAC = 38701, sync = True, waitForSettling = False)
17-03-17 21:42:11.028 -07 000000475 INF: Z Motor: Moving to -0.177162 mm, started at -0.170631 mm, distance = -6.53 um
17-03-17 21:42:11.038 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:11.038 -07 000000458 INF: FPGA: Recv YRDPOS 131188
17-03-17 21:42:11.048 -07 000000475 INF: FPGA: Xmit ZDACW 38701\n [Z Motor]
17-03-17 21:42:11.048 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:42:11.048 -07 000000480 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:11.048 -07 000000480 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:11.048 -07 000000480 INF: Y Motor: Moving 1338 steps-13
17-03-17 21:42:11.048 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:42:11.058 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:11.058 -07 000000475 INF: FPGA: 'ZDACW 38701' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 21:42:11.068 -07 000000475 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:11.068 -07 000000569 INF: FPGA: Recv ZDACR 38701
17-03-17 21:42:11.078 -07 000000475 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:11.078 -07 000000475 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-17 21:42:11.208 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:42:11.208 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:42:11.208 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:11.208 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:42:11.208 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:42:11.208 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:11.208 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:11.208 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:11.208 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:42:11.218 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:42:11.228 -07 000000627 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:42:11.228 -07 000000438 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-17 21:42:11.428 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:42:11.428 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:42:11.468 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:11.478 -07 000000382 INF: FPGA: Recv YRDPOS 132871
17-03-17 21:42:11.478 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:42:11.478 -07 000000480 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:11.478 -07 000000480 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:42:11.478 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.836 mm, average velocity = 2.160 mm/sec
17-03-17 21:42:11.898 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:11.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:12.428 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:12.428 -07 000000576 INF: FPGA: Recv YRDPOS 132871
17-03-17 21:42:12.438 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.438 -07 000000480 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:12.458 -07 000000480 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:12.458 -07 000000480 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:12.458 -07 000000480 INF: Y Motor: Moved to 64.8784 after 1431 ms (table move)
17-03-17 21:42:12.458 -07 000000424 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177162 mm (DAC = 38701)
17-03-17 21:42:12.458 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.468 -07 000000438 INF: FPGA: Recv ZSGSRD 36878
17-03-17 21:42:12.468 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:42:12.468 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.468 -07 000000608 INF: FPGA: Recv ZSGSRD 36866
17-03-17 21:42:12.478 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:12.478 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.478 -07 000000569 INF: FPGA: Recv ZSGSRD 36868
17-03-17 21:42:12.488 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.488 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.488 -07 000000626 INF: FPGA: Recv ZSGSRD 36865
17-03-17 21:42:12.498 -07 000000424 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.498 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.498 -07 000000576 INF: FPGA: Recv ZSGSRD 36874
17-03-17 21:42:12.508 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.508 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.508 -07 000000458 INF: FPGA: Recv ZSGSRD 36869
17-03-17 21:42:12.518 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.518 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.518 -07 000000627 INF: FPGA: Recv ZSGSRD 36865
17-03-17 21:42:12.528 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.528 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.528 -07 000000476 INF: FPGA: Recv ZSGSRD 36867
17-03-17 21:42:12.538 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.538 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.538 -07 000000569 INF: FPGA: Recv ZSGSRD 36865
17-03-17 21:42:12.548 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.548 -07 000000424 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:12.548 -07 000000576 INF: FPGA: Recv ZSGSRD 36868
17-03-17 21:42:12.558 -07 000000424 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.558 -07 000000424 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:12.558 -07 000000608 INF: FPGA: Recv ZPIEZORD 33266
17-03-17 21:42:12.568 -07 000000424 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:12.568 -07 000000424 INF: Z Motor: Piezo is near 51.1 V (nominally 0 to 100 V), expect near 59.1 V, since DAC is at 5.905 V. Piezo Error = -8.0 V.
17-03-17 21:42:12.568 -07 000000424 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.2 um, Read 10 ADC samples: Avg = 36868 (-176.3 uncal um), Error = 0.9 uncal um, Median = 36868 (-176.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36865 (-176.3 uncal um), Max = 36878 (-176.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:42:12.568 -07 000000424 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36868, posNoise = 10, negNoise = 3
17-03-17 21:42:12.568 -07 000000424 INF: Z Motor: After move to -0.177162, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:12.568 -07 000000424 INF: Z Motor: Settle wait time = 1434 ms, measure time = 103 ms (allowed 150 ms), total time = 1537 ms
17-03-17 21:42:12.568 -07 000000424 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:12.618 -07 000000424 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-17 21:42:12.618 -07 000000424 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:12.618 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:12.618 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:12.618 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:12.618 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:12.618 -07 000000012 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:42:12.618 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:12.618 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:42:12.618 -07 000000012 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:42:12.628 -07 000000012 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:12.628 -07 000000012 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:42:12.638 -07 000000012 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-17 21:42:12.638 -07 000000012 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 21:42:12.638 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:42:12.678 -07 000000547 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:42:12.878 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:42:12.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:42:12.878 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:42:12.888 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) start.
17-03-17 21:42:12.918 -07 000000382 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:42:12.918 -07 000000626 INF: FPGA: Recv CAMSNAP
17-03-17 21:42:12.918 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 21:42:13.008 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:42:13.008 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:13.008 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:42:13.008 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:42:13.118 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:13.118 -07 000000476 INF: Autofocus start
17-03-17 21:42:13.118 -07 000000476 INF: MeasureProfile start
17-03-17 21:42:13.118 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:13.128 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:13.128 -07 000000480 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:42:13.128 -07 000000476 INF: MeasureProfile done
17-03-17 21:42:13.128 -07 000000476 INF: X=-16  Z correction [um]=-0.1496812
17-03-17 21:42:13.128 -07 000000476 INF: Autofocus finished
17-03-17 21:42:13.328 -07 000000382 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:42:13.328 -07 000000480 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:42:13.328 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.177171205253578. ----------
17-03-17 21:42:13.328 -07 000000610 INF: Cycle	54	Tile	7	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:13.338 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37181, sync = True, waitForSettling = True)
17-03-17 21:42:13.338 -07 000000610 INF: Z Motor: Moving to -0.170204 mm, started at -0.177171 mm, distance = 6.97 um
17-03-17 21:42:13.338 -07 000000610 INF: FPGA: Xmit ZDACW 37181\n [Z Motor]
17-03-17 21:42:13.338 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:42:13.348 -07 000000610 INF: FPGA: 'ZDACW 37181' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:13.348 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:13.348 -07 000000608 INF: FPGA: Recv ZDACR 37181
17-03-17 21:42:13.358 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.358 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:13.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.508 -07 000000382 INF: FPGA: Recv ZSGSRD 35785
17-03-17 21:42:13.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:13.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.518 -07 000000415 INF: FPGA: Recv ZSGSRD 35784
17-03-17 21:42:13.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.528 -07 000000480 INF: FPGA: Recv ZSGSRD 35785
17-03-17 21:42:13.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.538 -07 000000431 INF: FPGA: Recv ZSGSRD 35781
17-03-17 21:42:13.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.548 -07 000000626 INF: FPGA: Recv ZSGSRD 35786
17-03-17 21:42:13.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.558 -07 000000459 INF: FPGA: Recv ZSGSRD 35783
17-03-17 21:42:13.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.568 -07 000000475 INF: FPGA: Recv ZSGSRD 35778
17-03-17 21:42:13.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.578 -07 000000424 INF: FPGA: Recv ZSGSRD 35783
17-03-17 21:42:13.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.588 -07 000000012 INF: FPGA: Recv ZSGSRD 35783
17-03-17 21:42:13.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:13.598 -07 000000626 INF: FPGA: Recv ZSGSRD 35789
17-03-17 21:42:13.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.608 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:13.608 -07 000000382 INF: FPGA: Recv ZPIEZORD 31801
17-03-17 21:42:13.618 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:13.618 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.673 V. Piezo Error = -8.8 V.
17-03-17 21:42:13.618 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35784 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35784 (-169.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35778 (-169.3 uncal um), Max = 35789 (-169.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:13.618 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35784, posNoise = 5, negNoise = 6
17-03-17 21:42:13.618 -07 000000610 INF: Z Motor: After move to -0.170204, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:13.618 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:42:13.618 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:13.618 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:13.618 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:13.618 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:13.618 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:13.618 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:13.618 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:13.618 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:13.618 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-17 21:42:13.618 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:13.618 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:13.618 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:13.628 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:13.628 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:13.628 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:13.628 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:13.638 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:42:13.638 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:42:13.638 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:42:13.638 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:42:13.648 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37357 150\n [Camera]
17-03-17 21:42:13.848 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 196
17-03-17 21:42:14.168 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.004458,
17-03-17 21:42:14.278 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:14.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:14.278 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:14.278 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:14.278 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 21:42:14.288 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:14.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:14.288 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:14.288 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:14.288 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 21:42:14.468 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37357 822
17-03-17 21:42:14.628 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:14.658 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:42:14.658 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:42:14.658 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:14.658 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:42:14.658 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:42:14.658 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:14.668 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:14.668 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:42:14.668 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:14.668 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 21:42:14.838 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:14.838 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:14.838 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:14.838 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:14.838 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:14.838 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:14.838 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-17 21:42:14.838 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:14.838 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:14.838 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-17 21:42:15.028 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:15.028 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:15.028 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37357 150' command took 2 ms to send, 1372 ms to get response, and 1381 ms overall
17-03-17 21:42:15.028 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170712
17-03-17 21:42:15.028 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17071 mm
17-03-17 21:42:15.028 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:15.028 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 21:42:15.028 -07 000000547 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-17 21:42:15.028 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:15.028 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 37292, sync = True, waitForSettling = False)
17-03-17 21:42:15.028 -07 000000501 INF: Z Motor: Moving to -0.170712 mm, started at -0.170207 mm, distance = -0.50 um
17-03-17 21:42:15.028 -07 000000576 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:42:15.038 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:15.038 -07 000000547 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:15.038 -07 000000501 INF: FPGA: Xmit ZDACW 37292\n [Z Motor]
17-03-17 21:42:15.038 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:42:15.038 -07 000000547 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:15.038 -07 000000547 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:42:15.048 -07 000000501 INF: FPGA: 'ZDACW 37292' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:42:15.048 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:15.048 -07 000000480 INF: FPGA: Recv ZDACR 37292
17-03-17 21:42:15.058 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:15.058 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:15.058 -07 000000501 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 21:42:15.218 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:42:15.218 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 21:42:15.218 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:42:15.218 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:15.218 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:42:15.218 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:15.228 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:42:15.228 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:42:15.228 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:42:15.238 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:42:15.428 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:42:15.428 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 391 ms overall
17-03-17 21:42:15.478 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:15.478 -07 000000475 INF: FPGA: Recv YRDPOS 134581
17-03-17 21:42:15.488 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:42:15.488 -07 000000547 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:15.488 -07 000000547 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 21:42:15.488 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.844 mm, average velocity = 2.154 mm/sec
17-03-17 21:42:16.438 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:16.438 -07 000000382 INF: FPGA: Recv YRDPOS 134581
17-03-17 21:42:16.448 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.448 -07 000000547 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:16.478 -07 000000547 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:16.478 -07 000000547 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:16.478 -07 000000547 INF: Y Motor: Moved to 65.7134 after 1444 ms (table move)
17-03-17 21:42:16.478 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170712 mm (DAC = 37292)
17-03-17 21:42:16.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.478 -07 000000475 INF: FPGA: Recv ZSGSRD 35867
17-03-17 21:42:16.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:42:16.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.488 -07 000000576 INF: FPGA: Recv ZSGSRD 35865
17-03-17 21:42:16.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.498 -07 000000476 INF: FPGA: Recv ZSGSRD 35866
17-03-17 21:42:16.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.508 -07 000000512 INF: FPGA: Recv ZSGSRD 35861
17-03-17 21:42:16.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.518 -07 000000431 INF: FPGA: Recv ZSGSRD 35861
17-03-17 21:42:16.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.528 -07 000000459 INF: FPGA: Recv ZSGSRD 35856
17-03-17 21:42:16.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.538 -07 000000415 INF: FPGA: Recv ZSGSRD 35867
17-03-17 21:42:16.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.548 -07 000000012 INF: FPGA: Recv ZSGSRD 35865
17-03-17 21:42:16.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.558 -07 000000382 INF: FPGA: Recv ZSGSRD 35866
17-03-17 21:42:16.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.568 -07 000000512 INF: FPGA: Recv ZSGSRD 35864
17-03-17 21:42:16.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.578 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:16.578 -07 000000501 INF: FPGA: Recv ZPIEZORD 31925
17-03-17 21:42:16.588 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.588 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.690 V. Piezo Error = -8.7 V.
17-03-17 21:42:16.588 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.7 um, Read 10 ADC samples: Avg = 35864 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35865 (-169.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35856 (-169.8 uncal um), Max = 35867 (-169.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:42:16.588 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35864, posNoise = 3, negNoise = 8
17-03-17 21:42:16.588 -07 000000610 INF: Z Motor: After move to -0.170712, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:16.588 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 106 ms (allowed 150 ms), total time = 1553 ms
17-03-17 21:42:16.588 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:16.638 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-17 21:42:16.638 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:16.638 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.17072129626325. ----------
17-03-17 21:42:16.638 -07 000000610 INF: Cycle	54	Tile	8	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:16.638 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37115, sync = True, waitForSettling = True)
17-03-17 21:42:16.638 -07 000000610 INF: Z Motor: Moving to -0.169902 mm, started at -0.170721 mm, distance = 0.82 um
17-03-17 21:42:16.638 -07 000000610 INF: FPGA: Xmit ZDACW 37115\n [Z Motor]
17-03-17 21:42:16.638 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:42:16.648 -07 000000610 INF: FPGA: 'ZDACW 37115' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:16.648 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:16.648 -07 000000501 INF: FPGA: Recv ZDACR 37115
17-03-17 21:42:16.658 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.658 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:16.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.808 -07 000000424 INF: FPGA: Recv ZSGSRD 35742
17-03-17 21:42:16.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:16.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.818 -07 000000012 INF: FPGA: Recv ZSGSRD 35744
17-03-17 21:42:16.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.828 -07 000000415 INF: FPGA: Recv ZSGSRD 35739
17-03-17 21:42:16.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.838 -07 000000431 INF: FPGA: Recv ZSGSRD 35732
17-03-17 21:42:16.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.848 -07 000000415 INF: FPGA: Recv ZSGSRD 35738
17-03-17 21:42:16.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.858 -07 000000627 INF: FPGA: Recv ZSGSRD 35740
17-03-17 21:42:16.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.868 -07 000000459 INF: FPGA: Recv ZSGSRD 35739
17-03-17 21:42:16.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.878 -07 000000476 INF: FPGA: Recv ZSGSRD 35738
17-03-17 21:42:16.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.888 -07 000000431 INF: FPGA: Recv ZSGSRD 35736
17-03-17 21:42:16.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:16.898 -07 000000476 INF: FPGA: Recv ZSGSRD 35736
17-03-17 21:42:16.898 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:16.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:16.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.908 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:16.908 -07 000000431 INF: FPGA: Recv ZPIEZORD 31743
17-03-17 21:42:16.918 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:16.918 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.663 V. Piezo Error = -8.8 V.
17-03-17 21:42:16.918 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35738 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35738 (-169.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35732 (-169.0 uncal um), Max = 35744 (-169.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:16.918 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35738, posNoise = 6, negNoise = 6
17-03-17 21:42:16.918 -07 000000610 INF: Z Motor: After move to -0.169902, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:16.918 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:42:16.918 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:16.918 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:16.918 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:16.918 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:16.918 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:16.918 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:16.918 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:16.918 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:16.918 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:16.918 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:16.918 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:16.918 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:16.918 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:16.918 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:16.918 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:16.918 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:16.928 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:42:16.928 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:42:16.928 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 21:42:16.928 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:42:16.938 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37292 150\n [Camera]
17-03-17 21:42:17.138 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:17.578 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:17.578 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:17.578 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:17.578 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:17.578 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-17 21:42:17.578 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:17.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:17.578 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:17.578 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:17.578 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-17 21:42:17.768 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37292 822
17-03-17 21:42:17.918 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:17.958 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:42:17.958 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:42:17.958 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:17.958 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:42:17.958 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:42:17.958 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:17.958 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:17.958 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:42:17.958 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:17.968 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:42:18.128 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:18.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:18.128 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:18.128 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:18.128 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-17 21:42:18.128 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:18.128 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:18.128 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:18.128 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:18.128 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-17 21:42:18.318 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:18.318 -07 000000476 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:18.318 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37292 150' command took 2 ms to send, 1374 ms to get response, and 1381 ms overall
17-03-17 21:42:18.318 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.170446
17-03-17 21:42:18.318 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17045 mm
17-03-17 21:42:18.318 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:18.328 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37234, sync = True, waitForSettling = False)
17-03-17 21:42:18.328 -07 000000512 INF: Z Motor: Moving to -0.170446 mm, started at -0.169912 mm, distance = -0.53 um
17-03-17 21:42:18.328 -07 000000512 INF: FPGA: Xmit ZDACW 37234\n [Z Motor]
17-03-17 21:42:18.328 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 21:42:18.328 -07 000000475 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-17 21:42:18.328 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:42:18.338 -07 000000512 INF: FPGA: 'ZDACW 37234' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:18.338 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:18.338 -07 000000480 INF: FPGA: Recv YRDPOS 134581
17-03-17 21:42:18.348 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 21:42:18.348 -07 000000475 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:18.348 -07 000000475 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:18.348 -07 000000475 INF: Y Motor: Moving 1343 steps-19
17-03-17 21:42:18.348 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:18.348 -07 000000501 INF: FPGA: Recv ZDACR 37234
17-03-17 21:42:18.358 -07 000000512 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:18.358 -07 000000512 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 21:42:18.358 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:18.518 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 394 ms.
17-03-17 21:42:18.518 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:42:18.518 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:18.518 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 391 ms.
17-03-17 21:42:18.518 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:42:18.518 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:18.528 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:18.528 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:42:18.528 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:18.538 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:42:18.728 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:42:18.728 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:42:18.768 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:18.778 -07 000000459 INF: FPGA: Recv YRDPOS 136271
17-03-17 21:42:18.778 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:18.778 -07 000000475 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:18.778 -07 000000475 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:42:18.778 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.163 mm/sec
17-03-17 21:42:19.538 -07 000000626 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.009895,
17-03-17 21:42:19.728 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:19.728 -07 000000512 INF: FPGA: Recv YRDPOS 136271
17-03-17 21:42:19.738 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:19.738 -07 000000475 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:19.758 -07 000000475 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:19.758 -07 000000475 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:19.758 -07 000000475 INF: Y Motor: Moved to 66.5386 after 1433 ms (table move)
17-03-17 21:42:19.758 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170446 mm (DAC = 37234)
17-03-17 21:42:19.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.768 -07 000000547 INF: FPGA: Recv ZSGSRD 35830
17-03-17 21:42:19.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:19.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.768 -07 000000569 INF: FPGA: Recv ZSGSRD 35823
17-03-17 21:42:19.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.778 -07 000000382 INF: FPGA: Recv ZSGSRD 35826
17-03-17 21:42:19.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.788 -07 000000512 INF: FPGA: Recv ZSGSRD 35824
17-03-17 21:42:19.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.798 -07 000000576 INF: FPGA: Recv ZSGSRD 35828
17-03-17 21:42:19.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:19.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.808 -07 000000431 INF: FPGA: Recv ZSGSRD 35827
17-03-17 21:42:19.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.818 -07 000000608 INF: FPGA: Recv ZSGSRD 35819
17-03-17 21:42:19.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.828 -07 000000415 INF: FPGA: Recv ZSGSRD 35821
17-03-17 21:42:19.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.838 -07 000000438 INF: FPGA: Recv ZSGSRD 35824
17-03-17 21:42:19.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:19.858 -07 000000459 INF: FPGA: Recv ZSGSRD 35826
17-03-17 21:42:19.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:19.868 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:19.868 -07 000000476 INF: FPGA: Recv ZPIEZORD 31909
17-03-17 21:42:19.878 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:19.878 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -8.6 V.
17-03-17 21:42:19.878 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35825 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35825 (-169.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35819 (-169.6 uncal um), Max = 35830 (-169.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:19.878 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35825, posNoise = 5, negNoise = 6
17-03-17 21:42:19.878 -07 000000610 INF: Z Motor: After move to -0.170446, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:19.878 -07 000000610 INF: Z Motor: Settle wait time = 1436 ms, measure time = 113 ms (allowed 150 ms), total time = 1549 ms
17-03-17 21:42:19.878 -07 000000610 INF: Z Motor: Waiting extra 37 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:19.918 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-17 21:42:19.918 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:19.918 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.170470751989721. ----------
17-03-17 21:42:19.918 -07 000000610 INF: Cycle	54	Tile	9	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:19.918 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37057, sync = True, waitForSettling = True)
17-03-17 21:42:19.918 -07 000000610 INF: Z Motor: Moving to -0.169636 mm, started at -0.170471 mm, distance = 0.83 um
17-03-17 21:42:19.918 -07 000000610 INF: FPGA: Xmit ZDACW 37057\n [Z Motor]
17-03-17 21:42:19.918 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:42:19.928 -07 000000610 INF: FPGA: 'ZDACW 37057' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:19.928 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:19.928 -07 000000429 INF: FPGA: Recv ZDACR 37057
17-03-17 21:42:19.938 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:19.938 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:20.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.088 -07 000000547 INF: FPGA: Recv ZSGSRD 35698
17-03-17 21:42:20.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:20.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.098 -07 000000415 INF: FPGA: Recv ZSGSRD 35697
17-03-17 21:42:20.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.108 -07 000000576 INF: FPGA: Recv ZSGSRD 35699
17-03-17 21:42:20.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.118 -07 000000459 INF: FPGA: Recv ZSGSRD 35697
17-03-17 21:42:20.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.128 -07 000000382 INF: FPGA: Recv ZSGSRD 35695
17-03-17 21:42:20.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.138 -07 000000501 INF: FPGA: Recv ZSGSRD 35693
17-03-17 21:42:20.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.148 -07 000000012 INF: FPGA: Recv ZSGSRD 35689
17-03-17 21:42:20.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.158 -07 000000458 INF: FPGA: Recv ZSGSRD 35696
17-03-17 21:42:20.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.168 -07 000000547 INF: FPGA: Recv ZSGSRD 35697
17-03-17 21:42:20.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:20.178 -07 000000480 INF: FPGA: Recv ZSGSRD 35697
17-03-17 21:42:20.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.188 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:20.188 -07 000000576 INF: FPGA: Recv ZPIEZORD 31706
17-03-17 21:42:20.198 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:20.198 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.655 V. Piezo Error = -8.8 V.
17-03-17 21:42:20.198 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.6 um, Read 10 ADC samples: Avg = 35696 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35697 (-168.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35689 (-168.7 uncal um), Max = 35699 (-168.8 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:42:20.198 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35696, posNoise = 3, negNoise = 7
17-03-17 21:42:20.198 -07 000000610 INF: Z Motor: After move to -0.169636, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:20.198 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:42:20.198 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:20.198 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:20.198 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:20.198 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:20.198 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:20.198 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:20.198 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:20.198 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:20.198 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:20.198 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:20.198 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:20.198 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:20.208 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:20.208 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:20.208 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:20.208 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:20.218 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:42:20.218 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:42:20.218 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:42:20.218 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:42:20.228 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37234 150\n [Camera]
17-03-17 21:42:20.428 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:20.858 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:20.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:20.858 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:20.858 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:20.858 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-17 21:42:20.868 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:20.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:20.868 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:20.868 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:20.868 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) start.
17-03-17 21:42:21.058 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37234 822
17-03-17 21:42:21.198 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:21.238 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:42:21.238 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:42:21.238 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:21.248 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:21.248 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:42:21.248 -07 000000431 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:42:21.248 -07 000000431 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:42:21.248 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:21.248 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:21.258 -07 000000431 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:42:21.418 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:21.418 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:21.418 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:21.418 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:21.418 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 3122434152, 0x0, 391868352) start.
17-03-17 21:42:21.418 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:21.418 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:21.418 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:21.418 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:21.418 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 3157856416, 0x0, 418435064) start.
17-03-17 21:42:21.608 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:21.608 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:21.608 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37234 150' command took 2 ms to send, 1372 ms to get response, and 1381 ms overall
17-03-17 21:42:21.608 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170350
17-03-17 21:42:21.608 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17035 mm
17-03-17 21:42:21.608 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:21.608 -07 000000459 INF: Z Motor: Entering MoveAbsStepped (DAC = 37213, sync = True, waitForSettling = False)
17-03-17 21:42:21.608 -07 000000459 INF: Z Motor: Moving to -0.170350 mm, started at -0.169642 mm, distance = -0.71 um
17-03-17 21:42:21.618 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 21:42:21.618 -07 000000012 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-17 21:42:21.618 -07 000000459 INF: FPGA: Xmit ZDACW 37213\n [Z Motor]
17-03-17 21:42:21.618 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:42:21.628 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:21.628 -07 000000459 INF: FPGA: 'ZDACW 37213' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:21.628 -07 000000608 INF: FPGA: Recv YRDPOS 136271
17-03-17 21:42:21.638 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:21.638 -07 000000012 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:21.638 -07 000000012 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:21.638 -07 000000012 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:42:21.638 -07 000000459 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:21.638 -07 000000438 INF: FPGA: Recv ZDACR 37213
17-03-17 21:42:21.648 -07 000000459 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:21.648 -07 000000459 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 21:42:21.648 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:21.798 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 3122434152, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 21:42:21.798 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:42:21.798 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:21.798 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 3157856416, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:42:21.798 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:42:21.798 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:21.798 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:21.798 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:42:21.808 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:21.808 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:42:21.898 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:21.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:22.018 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:42:22.018 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:42:22.058 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:22.068 -07 000000459 INF: FPGA: Recv YRDPOS 137977
17-03-17 21:42:22.068 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:42:22.068 -07 000000012 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:22.068 -07 000000012 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-17 21:42:22.068 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.175 mm/sec
17-03-17 21:42:23.018 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:23.018 -07 000000480 INF: FPGA: Recv YRDPOS 137977
17-03-17 21:42:23.028 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:23.028 -07 000000012 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:23.048 -07 000000012 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:23.048 -07 000000012 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:23.048 -07 000000012 INF: Y Motor: Moved to 67.3716 after 1434 ms (table move)
17-03-17 21:42:23.048 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170350 mm (DAC = 37213)
17-03-17 21:42:23.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.058 -07 000000627 INF: FPGA: Recv ZSGSRD 35801
17-03-17 21:42:23.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:23.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.058 -07 000000459 INF: FPGA: Recv ZSGSRD 35814
17-03-17 21:42:23.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.068 -07 000000501 INF: FPGA: Recv ZSGSRD 35814
17-03-17 21:42:23.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.078 -07 000000424 INF: FPGA: Recv ZSGSRD 35814
17-03-17 21:42:23.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.088 -07 000000429 INF: FPGA: Recv ZSGSRD 35805
17-03-17 21:42:23.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.098 -07 000000382 INF: FPGA: Recv ZSGSRD 35803
17-03-17 21:42:23.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.108 -07 000000547 INF: FPGA: Recv ZSGSRD 35799
17-03-17 21:42:23.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.118 -07 000000476 INF: FPGA: Recv ZSGSRD 35804
17-03-17 21:42:23.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.128 -07 000000576 INF: FPGA: Recv ZSGSRD 35800
17-03-17 21:42:23.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.138 -07 000000475 INF: FPGA: Recv ZSGSRD 35815
17-03-17 21:42:23.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.148 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:23.148 -07 000000569 INF: FPGA: Recv ZPIEZORD 31856
17-03-17 21:42:23.158 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.158 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.678 V. Piezo Error = -8.7 V.
17-03-17 21:42:23.158 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35807 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35804 (-169.5 uncal um), StdDev = 7 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35799 (-169.4 uncal um), Max = 35815 (-169.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:42:23.158 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35807, posNoise = 8, negNoise = 8
17-03-17 21:42:23.158 -07 000000610 INF: Z Motor: After move to -0.170350, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:23.158 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 104 ms (allowed 150 ms), total time = 1541 ms
17-03-17 21:42:23.158 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:23.208 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-17 21:42:23.208 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:23.208 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.17035511617117. ----------
17-03-17 21:42:23.208 -07 000000610 INF: Cycle	54	Tile	10	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:23.208 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37036, sync = True, waitForSettling = True)
17-03-17 21:42:23.208 -07 000000610 INF: Z Motor: Moving to -0.169540 mm, started at -0.170355 mm, distance = 0.82 um
17-03-17 21:42:23.208 -07 000000610 INF: FPGA: Xmit ZDACW 37036\n [Z Motor]
17-03-17 21:42:23.208 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:42:23.218 -07 000000610 INF: FPGA: 'ZDACW 37036' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:42:23.218 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:23.218 -07 000000012 INF: FPGA: Recv ZDACR 37036
17-03-17 21:42:23.228 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.228 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:23.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.378 -07 000000627 INF: FPGA: Recv ZSGSRD 35682
17-03-17 21:42:23.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:23.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.388 -07 000000476 INF: FPGA: Recv ZSGSRD 35684
17-03-17 21:42:23.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.398 -07 000000576 INF: FPGA: Recv ZSGSRD 35685
17-03-17 21:42:23.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.408 -07 000000512 INF: FPGA: Recv ZSGSRD 35684
17-03-17 21:42:23.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.418 -07 000000501 INF: FPGA: Recv ZSGSRD 35676
17-03-17 21:42:23.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.428 -07 000000480 INF: FPGA: Recv ZSGSRD 35676
17-03-17 21:42:23.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.438 -07 000000012 INF: FPGA: Recv ZSGSRD 35681
17-03-17 21:42:23.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.448 -07 000000458 INF: FPGA: Recv ZSGSRD 35677
17-03-17 21:42:23.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.458 -07 000000438 INF: FPGA: Recv ZSGSRD 35679
17-03-17 21:42:23.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:23.468 -07 000000429 INF: FPGA: Recv ZSGSRD 35683
17-03-17 21:42:23.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.478 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:23.478 -07 000000424 INF: FPGA: Recv ZPIEZORD 31711
17-03-17 21:42:23.488 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:23.488 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.651 V. Piezo Error = -8.8 V.
17-03-17 21:42:23.488 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35681 (-168.7 uncal um), Error = 0.9 uncal um, Median = 35682 (-168.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35676 (-168.6 uncal um), Max = 35685 (-168.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:42:23.488 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35681, posNoise = 4, negNoise = 5
17-03-17 21:42:23.488 -07 000000610 INF: Z Motor: After move to -0.169540, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:23.488 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 21:42:23.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:23.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:23.488 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:23.488 -07 000000476 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:23.488 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:23.488 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:23.488 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:23.488 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:23.488 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:23.488 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:23.488 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:23.488 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:23.498 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:23.498 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:23.498 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:23.498 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:23.508 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-17 21:42:23.508 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:42:23.518 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-17 21:42:23.518 -07 000000012 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:42:23.518 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37213 150\n [Camera]
17-03-17 21:42:23.718 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:24.148 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:24.148 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:24.148 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:24.158 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:24.158 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 3221229616, 0x0, 391868352) start.
17-03-17 21:42:24.158 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:24.158 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:24.158 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:24.158 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:24.158 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 3256651880, 0x0, 418435064) start.
17-03-17 21:42:24.348 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37213 822
17-03-17 21:42:24.498 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 974
17-03-17 21:42:24.548 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 3221229616, 0x0, 391868352) end. Duration was 397 ms.
17-03-17 21:42:24.548 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 21:42:24.548 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:24.558 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:24.558 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 21:42:24.558 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 3256651880, 0x0, 418435064) end. Duration was 398 ms.
17-03-17 21:42:24.558 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:42:24.558 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:24.558 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:24.568 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-17 21:42:24.708 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:24.708 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:24.708 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:24.708 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:24.708 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 3292074144, 0x0, 391868352) start.
17-03-17 21:42:24.708 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:24.708 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:24.708 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:24.708 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:24.708 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 3355447344, 0x0, 418435064) start.
17-03-17 21:42:24.898 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:24.898 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:24.898 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37213 150' command took 2 ms to send, 1373 ms to get response, and 1381 ms overall
17-03-17 21:42:24.898 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:42:24.898 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37158203125, Z-Position -0.169545665441308. ------
17-03-17 21:42:24.908 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.99219,
17-03-17 21:42:24.908 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17588 mm
17-03-17 21:42:24.908 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:24.908 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 38421, sync = True, waitForSettling = False)
17-03-17 21:42:24.908 -07 000000480 INF: Z Motor: Moving to -0.175880 mm, started at -0.169546 mm, distance = -6.33 um
17-03-17 21:42:24.908 -07 000000431 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 21:42:24.908 -07 000000431 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-17 21:42:24.918 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:24.918 -07 000000476 INF: FPGA: Recv YRDPOS 137977
17-03-17 21:42:24.928 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:24.928 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:42:24.928 -07 000000431 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:24.928 -07 000000431 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:24.928 -07 000000431 INF: Y Motor: Moving 1346 steps-23
17-03-17 21:42:24.928 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:24.938 -07 000000480 INF: FPGA: Xmit ZDACW 38421\n [Z Motor]
17-03-17 21:42:24.938 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 21:42:24.938 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:42:24.948 -07 000000480 INF: FPGA: 'ZDACW 38421' command took 0 ms to send, 0 ms to get response, and 32 ms overall
17-03-17 21:42:24.968 -07 000000431 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:24.978 -07 000000424 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:42:24.988 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:24.988 -07 000000476 INF: FPGA: Recv ZDACR 38421
17-03-17 21:42:24.998 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 49 ms overall
17-03-17 21:42:24.998 -07 000000480 INF: Z Motor: MoveAbsStepped took 83 ms (did NOT wait for settling yet))
17-03-17 21:42:25.088 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 3292074144, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:42:25.088 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:42:25.088 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:25.088 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 3355447344, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:42:25.088 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:42:25.088 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:25.088 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:25.088 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:42:25.088 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:25.098 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:42:25.178 -07 000000480 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:42:25.178 -07 000000424 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 242 ms overall
17-03-17 21:42:25.338 -07 000000415 INF: FPGA: Recv YMVTILE
17-03-17 21:42:25.338 -07 000000431 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 417 ms overall
17-03-17 21:42:25.378 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:25.388 -07 000000576 INF: FPGA: Recv YRDPOS 139682
17-03-17 21:42:25.398 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:25.398 -07 000000431 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:25.398 -07 000000431 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:42:25.398 -07 000000431 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 417 ms, distance = 0.841 mm, average velocity = 2.017 mm/sec
17-03-17 21:42:26.348 -07 000000431 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:26.348 -07 000000429 INF: FPGA: Recv YRDPOS 139683
17-03-17 21:42:26.358 -07 000000431 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.358 -07 000000431 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:26.378 -07 000000431 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:26.378 -07 000000431 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:42:26.378 -07 000000431 INF: Y Motor: Moved to 68.2046 after 1468 ms (table move)
17-03-17 21:42:26.378 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175880 mm (DAC = 38421)
17-03-17 21:42:26.378 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.388 -07 000000012 INF: FPGA: Recv ZSGSRD 36674
17-03-17 21:42:26.388 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:42:26.388 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.388 -07 000000569 INF: FPGA: Recv ZSGSRD 36670
17-03-17 21:42:26.398 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:42:26.398 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.398 -07 000000475 INF: FPGA: Recv ZSGSRD 36674
17-03-17 21:42:26.408 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.408 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.408 -07 000000459 INF: FPGA: Recv ZSGSRD 36669
17-03-17 21:42:26.418 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.418 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.418 -07 000000424 INF: FPGA: Recv ZSGSRD 36664
17-03-17 21:42:26.428 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.428 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.428 -07 000000431 INF: FPGA: Recv ZSGSRD 36667
17-03-17 21:42:26.438 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.438 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.438 -07 000000512 INF: FPGA: Recv ZSGSRD 36665
17-03-17 21:42:26.448 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.448 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.448 -07 000000429 INF: FPGA: Recv ZSGSRD 36661
17-03-17 21:42:26.458 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.458 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.458 -07 000000475 INF: FPGA: Recv ZSGSRD 36669
17-03-17 21:42:26.468 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.468 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:26.468 -07 000000415 INF: FPGA: Recv ZSGSRD 36673
17-03-17 21:42:26.478 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.478 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:26.478 -07 000000438 INF: FPGA: Recv ZPIEZORD 33034
17-03-17 21:42:26.488 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:26.488 -07 000000626 INF: Z Motor: Piezo is near 50.6 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.863 V. Piezo Error = -8.1 V.
17-03-17 21:42:26.488 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.9 um, Read 10 ADC samples: Avg = 36669 (-175.0 uncal um), Error = 0.9 uncal um, Median = 36669 (-175.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36661 (-175.0 uncal um), Max = 36674 (-175.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:42:26.488 -07 000000626 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36669, posNoise = 5, negNoise = 8
17-03-17 21:42:26.488 -07 000000626 INF: Z Motor: After move to -0.175880, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:26.488 -07 000000626 INF: Z Motor: Settle wait time = 1472 ms, measure time = 101 ms (allowed 150 ms), total time = 1573 ms
17-03-17 21:42:26.488 -07 000000626 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:26.538 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1625 ms
17-03-17 21:42:26.538 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:26.538 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:26.538 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:26.538 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:26.538 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:26.538 -07 000000459 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:42:26.538 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:26.538 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:42:26.538 -07 000000459 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:42:26.548 -07 000000459 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:26.548 -07 000000459 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:42:26.558 -07 000000459 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 21:42:26.558 -07 000000459 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 21:42:26.558 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:42:26.608 -07 000000012 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:42:26.798 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:42:26.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:42:26.808 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:42:26.948 -07 000000627 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:42:26.948 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 21:42:26.948 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:26.948 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 620730440, 0x0, 559484976) start.
17-03-17 21:42:26.948 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 388 ms to get response, and 393 ms overall
17-03-17 21:42:27.068 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 620730440, 0x0, 559484976) end. Duration was 113 ms.
17-03-17 21:42:27.068 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:27.068 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:42:27.068 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 263 ms.
17-03-17 21:42:27.068 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:27.148 -07 000000438 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:27.148 -07 000000480 INF: Autofocus start
17-03-17 21:42:27.148 -07 000000480 INF: MeasureProfile start
17-03-17 21:42:27.148 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:27.158 -07 000000438 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:27.158 -07 000000438 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:42:27.158 -07 000000480 INF: MeasureProfile done
17-03-17 21:42:27.158 -07 000000480 INF: X=32  Z correction [um]=0.09220707
17-03-17 21:42:27.158 -07 000000480 INF: Autofocus finished
17-03-17 21:42:27.358 -07 000000608 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:42:27.358 -07 000000438 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:42:27.358 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.175892787037367. ----------
17-03-17 21:42:27.358 -07 000000610 INF: Cycle	54	Tile	11	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:27.368 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36954, sync = True, waitForSettling = True)
17-03-17 21:42:27.368 -07 000000610 INF: Z Motor: Moving to -0.169165 mm, started at -0.175893 mm, distance = 6.73 um
17-03-17 21:42:27.368 -07 000000610 INF: FPGA: Xmit ZDACW 36954\n [Z Motor]
17-03-17 21:42:27.368 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:42:27.378 -07 000000610 INF: FPGA: 'ZDACW 36954' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.378 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:27.378 -07 000000475 INF: FPGA: Recv ZDACR 36954
17-03-17 21:42:27.388 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.388 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:27.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.538 -07 000000626 INF: FPGA: Recv ZSGSRD 35619
17-03-17 21:42:27.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:27.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.548 -07 000000627 INF: FPGA: Recv ZSGSRD 35621
17-03-17 21:42:27.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.558 -07 000000431 INF: FPGA: Recv ZSGSRD 35620
17-03-17 21:42:27.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.568 -07 000000476 INF: FPGA: Recv ZSGSRD 35623
17-03-17 21:42:27.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.578 -07 000000576 INF: FPGA: Recv ZSGSRD 35624
17-03-17 21:42:27.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.588 -07 000000415 INF: FPGA: Recv ZSGSRD 35622
17-03-17 21:42:27.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.598 -07 000000480 INF: FPGA: Recv ZSGSRD 35625
17-03-17 21:42:27.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.608 -07 000000382 INF: FPGA: Recv ZSGSRD 35623
17-03-17 21:42:27.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.618 -07 000000429 INF: FPGA: Recv ZSGSRD 35620
17-03-17 21:42:27.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:27.628 -07 000000475 INF: FPGA: Recv ZSGSRD 35626
17-03-17 21:42:27.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.638 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:27.638 -07 000000382 INF: FPGA: Recv ZPIEZORD 31653
17-03-17 21:42:27.648 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:27.648 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.639 V. Piezo Error = -8.8 V.
17-03-17 21:42:27.648 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.2 um, Read 10 ADC samples: Avg = 35622 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35622 (-168.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35619 (-168.3 uncal um), Max = 35626 (-168.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:42:27.648 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35622, posNoise = 4, negNoise = 3
17-03-17 21:42:27.648 -07 000000610 INF: Z Motor: After move to -0.169165, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:27.648 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 21:42:27.648 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:27.648 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:27.648 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:27.648 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:27.648 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:27.648 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:27.648 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:42:27.648 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:27.648 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:27.648 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:27.648 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:27.648 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:27.648 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:27.648 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:27.658 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:27.658 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:27.658 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:42:27.658 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 21:42:27.668 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:42:27.668 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:42:27.668 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37131 150\n [Camera]
17-03-17 21:42:27.868 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:28.308 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:28.308 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:28.308 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:28.308 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:28.308 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:28.308 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:28.308 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:28.308 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:42:28.308 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:28.308 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:42:28.498 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37131 823
17-03-17 21:42:28.648 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:28.688 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:42:28.688 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:42:28.688 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:28.688 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 21:42:28.688 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:42:28.688 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:28.688 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:28.688 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:42:28.698 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:28.698 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:42:28.858 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:28.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:28.858 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:28.858 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:28.858 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:42:28.858 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:28.858 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:28.858 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:28.978 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:28.978 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:42:29.048 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1376
17-03-17 21:42:29.048 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:29.048 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37131 150' command took 2 ms to send, 1377 ms to get response, and 1383 ms overall
17-03-17 21:42:29.048 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169765
17-03-17 21:42:29.058 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16976 mm
17-03-17 21:42:29.058 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:29.058 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 21:42:29.058 -07 000000569 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-17 21:42:29.058 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:29.058 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 37085, sync = True, waitForSettling = False)
17-03-17 21:42:29.058 -07 000000480 INF: Z Motor: Moving to -0.169764 mm, started at -0.169167 mm, distance = -0.60 um
17-03-17 21:42:29.058 -07 000000459 INF: FPGA: Recv YRDPOS 139683
17-03-17 21:42:29.068 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:29.068 -07 000000569 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:29.068 -07 000000569 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:29.068 -07 000000569 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:42:29.068 -07 000000480 INF: FPGA: Xmit ZDACW 37085\n [Z Motor]
17-03-17 21:42:29.068 -07 000000626 INF: FPGA: Recv ZDACW
17-03-17 21:42:29.078 -07 000000480 INF: FPGA: 'ZDACW 37085' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:42:29.078 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:29.078 -07 000000627 INF: FPGA: Recv ZDACR 37085
17-03-17 21:42:29.088 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:29.088 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:29.088 -07 000000480 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-17 21:42:29.248 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 388 ms.
17-03-17 21:42:29.248 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:42:29.248 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:29.248 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:29.248 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:42:29.358 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:42:29.358 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:42:29.358 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:29.368 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:29.368 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-17 21:42:29.458 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:42:29.458 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:42:29.498 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:29.498 -07 000000424 INF: FPGA: Recv YRDPOS 141366
17-03-17 21:42:29.508 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:29.508 -07 000000569 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:29.508 -07 000000569 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 21:42:29.508 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.838 mm, average velocity = 2.111 mm/sec
17-03-17 21:42:30.338 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.971733,
17-03-17 21:42:30.458 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:30.458 -07 000000476 INF: FPGA: Recv YRDPOS 141367
17-03-17 21:42:30.468 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:30.468 -07 000000569 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:30.488 -07 000000569 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:30.488 -07 000000569 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:42:30.488 -07 000000569 INF: Y Motor: Moved to 69.0269 after 1430 ms (table move)
17-03-17 21:42:30.488 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169764 mm (DAC = 37085)
17-03-17 21:42:30.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.498 -07 000000475 INF: FPGA: Recv ZSGSRD 35716
17-03-17 21:42:30.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 3 ms to get response, and 6 ms overall
17-03-17 21:42:30.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.498 -07 000000415 INF: FPGA: Recv ZSGSRD 35720
17-03-17 21:42:30.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:42:30.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.508 -07 000000429 INF: FPGA: Recv ZSGSRD 35716
17-03-17 21:42:30.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.518 -07 000000480 INF: FPGA: Recv ZSGSRD 35722
17-03-17 21:42:30.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.528 -07 000000501 INF: FPGA: Recv ZSGSRD 35715
17-03-17 21:42:30.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.538 -07 000000458 INF: FPGA: Recv ZSGSRD 35720
17-03-17 21:42:30.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.548 -07 000000476 INF: FPGA: Recv ZSGSRD 35716
17-03-17 21:42:30.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.558 -07 000000569 INF: FPGA: Recv ZSGSRD 35705
17-03-17 21:42:30.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.568 -07 000000424 INF: FPGA: Recv ZSGSRD 35716
17-03-17 21:42:30.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.578 -07 000000626 INF: FPGA: Recv ZSGSRD 35715
17-03-17 21:42:30.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.588 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:30.588 -07 000000012 INF: FPGA: Recv ZPIEZORD 31800
17-03-17 21:42:30.598 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.598 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.659 V. Piezo Error = -8.7 V.
17-03-17 21:42:30.598 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35716 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35716 (-168.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35705 (-168.8 uncal um), Max = 35722 (-168.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:42:30.598 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35716, posNoise = 6, negNoise = 11
17-03-17 21:42:30.598 -07 000000610 INF: Z Motor: After move to -0.169764, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:30.598 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 103 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:42:30.598 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:30.648 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-17 21:42:30.648 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:30.648 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.169770512866269. ----------
17-03-17 21:42:30.648 -07 000000610 INF: Cycle	54	Tile	12	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:30.648 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36908, sync = True, waitForSettling = True)
17-03-17 21:42:30.648 -07 000000610 INF: Z Motor: Moving to -0.168954 mm, started at -0.169771 mm, distance = 0.82 um
17-03-17 21:42:30.668 -07 000000610 INF: FPGA: Xmit ZDACW 36908\n [Z Motor]
17-03-17 21:42:30.668 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:42:30.678 -07 000000610 INF: FPGA: 'ZDACW 36908' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-17 21:42:30.698 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:30.698 -07 000000627 INF: FPGA: Recv ZDACR 36908
17-03-17 21:42:30.708 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 21:42:30.708 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:30.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.858 -07 000000415 INF: FPGA: Recv ZSGSRD 35585
17-03-17 21:42:30.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:30.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.868 -07 000000382 INF: FPGA: Recv ZSGSRD 35592
17-03-17 21:42:30.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.878 -07 000000626 INF: FPGA: Recv ZSGSRD 35593
17-03-17 21:42:30.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.888 -07 000000576 INF: FPGA: Recv ZSGSRD 35589
17-03-17 21:42:30.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.898 -07 000000501 INF: FPGA: Recv ZSGSRD 35588
17-03-17 21:42:30.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.908 -07 000000458 INF: FPGA: Recv ZSGSRD 35594
17-03-17 21:42:30.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.918 -07 000000431 INF: FPGA: Recv ZSGSRD 35593
17-03-17 21:42:30.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.928 -07 000000475 INF: FPGA: Recv ZSGSRD 35590
17-03-17 21:42:30.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.938 -07 000000480 INF: FPGA: Recv ZSGSRD 35583
17-03-17 21:42:30.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:30.948 -07 000000501 INF: FPGA: Recv ZSGSRD 35588
17-03-17 21:42:30.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.958 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:30.958 -07 000000429 INF: FPGA: Recv ZPIEZORD 31629
17-03-17 21:42:30.968 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:30.968 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.632 V. Piezo Error = -8.8 V.
17-03-17 21:42:30.968 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35590 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35590 (-168.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35583 (-168.0 uncal um), Max = 35594 (-168.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:42:30.968 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35590, posNoise = 4, negNoise = 7
17-03-17 21:42:30.968 -07 000000610 INF: Z Motor: After move to -0.168954, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:30.968 -07 000000610 INF: Z Motor: MoveAbsStepped took 315 ms)
17-03-17 21:42:30.968 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:30.968 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:30.968 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:30.968 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:30.968 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:30.968 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:30.968 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:30.968 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:30.968 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:42:30.968 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:30.968 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:30.968 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:30.978 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:30.978 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:30.978 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:30.978 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:30.988 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:42:30.988 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:42:30.988 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 21:42:30.988 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:42:30.988 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 37085 150\n [Camera]
17-03-17 21:42:31.188 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:31.628 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:31.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:31.628 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:31.628 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:31.628 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:42:31.628 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:31.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:31.628 -07 000000459 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:31.628 -07 000000459 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:31.628 -07 000000459 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:42:31.818 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37085 822
17-03-17 21:42:31.898 -07 000000458 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:31.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:31.968 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:32.008 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:42:32.008 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:42:32.008 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:32.008 -07 000000459 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 21:42:32.008 -07 000000459 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:42:32.008 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:32.018 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:32.018 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:42:32.018 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:32.028 -07 000000459 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:42:32.178 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:32.178 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:32.178 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:32.178 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:32.178 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:42:32.178 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:32.178 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:32.178 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:32.178 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:32.178 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:42:32.368 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:32.368 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:32.368 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 37085 150' command took 2 ms to send, 1374 ms to get response, and 1381 ms overall
17-03-17 21:42:32.368 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.169289
17-03-17 21:42:32.368 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16929 mm
17-03-17 21:42:32.368 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:32.368 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 21:42:32.368 -07 000000626 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-17 21:42:32.368 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:32.368 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 36981, sync = True, waitForSettling = False)
17-03-17 21:42:32.368 -07 000000476 INF: Z Motor: Moving to -0.169288 mm, started at -0.168961 mm, distance = -0.33 um
17-03-17 21:42:32.378 -07 000000476 INF: FPGA: Xmit ZDACW 36981\n [Z Motor]
17-03-17 21:42:32.378 -07 000000627 INF: FPGA: Recv YRDPOS 141367
17-03-17 21:42:32.378 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:42:32.378 -07 000000626 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:32.378 -07 000000626 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:32.378 -07 000000626 INF: Y Motor: Moving 1353 steps-33
17-03-17 21:42:32.378 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:42:32.388 -07 000000476 INF: FPGA: 'ZDACW 36981' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:32.388 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:32.388 -07 000000424 INF: FPGA: Recv ZDACR 36981
17-03-17 21:42:32.398 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:32.398 -07 000000476 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-17 21:42:32.398 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:32.568 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:42:32.568 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:42:32.568 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:32.568 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 21:42:32.568 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:42:32.568 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:32.568 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:32.568 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:42:32.568 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:32.578 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:42:32.768 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 21:42:32.768 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall
17-03-17 21:42:32.808 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:32.818 -07 000000569 INF: FPGA: Recv YRDPOS 143079
17-03-17 21:42:32.818 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:32.818 -07 000000626 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:32.818 -07 000000626 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 21:42:32.818 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.846 mm, average velocity = 2.136 mm/sec
17-03-17 21:42:33.768 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:33.768 -07 000000431 INF: FPGA: Recv YRDPOS 143079
17-03-17 21:42:33.778 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:33.778 -07 000000626 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:33.798 -07 000000626 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:33.798 -07 000000626 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:33.798 -07 000000626 INF: Y Motor: Moved to 69.8628 after 1424 ms (table move)
17-03-17 21:42:33.798 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169288 mm (DAC = 36981)
17-03-17 21:42:33.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.808 -07 000000480 INF: FPGA: Recv ZSGSRD 35638
17-03-17 21:42:33.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:33.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.808 -07 000000576 INF: FPGA: Recv ZSGSRD 35647
17-03-17 21:42:33.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.818 -07 000000012 INF: FPGA: Recv ZSGSRD 35649
17-03-17 21:42:33.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.828 -07 000000569 INF: FPGA: Recv ZSGSRD 35644
17-03-17 21:42:33.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.838 -07 000000476 INF: FPGA: Recv ZSGSRD 35637
17-03-17 21:42:33.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.848 -07 000000382 INF: FPGA: Recv ZSGSRD 35641
17-03-17 21:42:33.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.858 -07 000000475 INF: FPGA: Recv ZSGSRD 35634
17-03-17 21:42:33.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.868 -07 000000626 INF: FPGA: Recv ZSGSRD 35643
17-03-17 21:42:33.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.878 -07 000000569 INF: FPGA: Recv ZSGSRD 35642
17-03-17 21:42:33.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:33.888 -07 000000476 INF: FPGA: Recv ZSGSRD 35646
17-03-17 21:42:33.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.898 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:33.898 -07 000000382 INF: FPGA: Recv ZPIEZORD 31689
17-03-17 21:42:33.908 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.908 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.643 V. Piezo Error = -8.7 V.
17-03-17 21:42:33.908 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35642 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35642 (-168.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35634 (-168.4 uncal um), Max = 35649 (-168.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:42:33.908 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35642, posNoise = 7, negNoise = 8
17-03-17 21:42:33.908 -07 000000610 INF: Z Motor: After move to -0.169288, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:33.908 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 104 ms (allowed 150 ms), total time = 1530 ms
17-03-17 21:42:33.908 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:33.958 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms
17-03-17 21:42:33.958 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:33.958 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.169295121167779. ----------
17-03-17 21:42:33.958 -07 000000610 INF: Cycle	54	Tile	13	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:33.958 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36804, sync = True, waitForSettling = True)
17-03-17 21:42:33.958 -07 000000610 INF: Z Motor: Moving to -0.168478 mm, started at -0.169295 mm, distance = 0.82 um
17-03-17 21:42:33.958 -07 000000610 INF: FPGA: Xmit ZDACW 36804\n [Z Motor]
17-03-17 21:42:33.958 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:42:33.968 -07 000000610 INF: FPGA: 'ZDACW 36804' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:33.968 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:33.968 -07 000000480 INF: FPGA: Recv ZDACR 36804
17-03-17 21:42:33.978 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:33.978 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:34.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.128 -07 000000438 INF: FPGA: Recv ZSGSRD 35525
17-03-17 21:42:34.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:34.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.138 -07 000000459 INF: FPGA: Recv ZSGSRD 35513
17-03-17 21:42:34.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.148 -07 000000458 INF: FPGA: Recv ZSGSRD 35514
17-03-17 21:42:34.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.158 -07 000000475 INF: FPGA: Recv ZSGSRD 35513
17-03-17 21:42:34.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:34.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.168 -07 000000424 INF: FPGA: Recv ZSGSRD 35512
17-03-17 21:42:34.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.178 -07 000000480 INF: FPGA: Recv ZSGSRD 35520
17-03-17 21:42:34.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.188 -07 000000429 INF: FPGA: Recv ZSGSRD 35521
17-03-17 21:42:34.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.198 -07 000000012 INF: FPGA: Recv ZSGSRD 35518
17-03-17 21:42:34.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.208 -07 000000627 INF: FPGA: Recv ZSGSRD 35519
17-03-17 21:42:34.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:34.218 -07 000000626 INF: FPGA: Recv ZSGSRD 35516
17-03-17 21:42:34.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.228 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:34.228 -07 000000458 INF: FPGA: Recv ZPIEZORD 31522
17-03-17 21:42:34.238 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:34.238 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.616 V. Piezo Error = -8.8 V.
17-03-17 21:42:34.238 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35517 (-167.6 uncal um), Error = 0.9 uncal um, Median = 35517 (-167.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35512 (-167.6 uncal um), Max = 35525 (-167.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:42:34.238 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35517, posNoise = 8, negNoise = 5
17-03-17 21:42:34.238 -07 000000610 INF: Z Motor: After move to -0.168478, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:34.238 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:42:34.238 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:34.238 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:34.238 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:34.238 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:34.238 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:34.238 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:34.238 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:34.238 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:34.238 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:34.238 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:34.238 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:34.238 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:34.248 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:42:34.248 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:34.248 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:42:34.248 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:34.258 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:42:34.258 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:42:34.258 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:42:34.258 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:42:34.268 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36981 150\n [Camera]
17-03-17 21:42:34.468 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:34.898 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:34.898 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:34.898 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:34.898 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:34.898 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:42:34.908 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:34.908 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:34.908 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:34.908 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:34.908 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:42:35.098 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36981 822
17-03-17 21:42:35.238 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:35.288 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:42:35.288 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:42:35.288 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:35.298 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 388 ms.
17-03-17 21:42:35.298 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:42:35.298 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:35.298 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:35.298 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:42:35.298 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:35.308 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:42:35.458 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:35.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:35.458 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:35.458 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:35.458 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:42:35.458 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:35.458 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:35.458 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:35.458 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:35.458 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:42:35.648 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:35.648 -07 000000415 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:35.648 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36981 150' command took 2 ms to send, 1373 ms to get response, and 1383 ms overall
17-03-17 21:42:35.648 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168926
17-03-17 21:42:35.648 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16893 mm
17-03-17 21:42:35.648 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:35.648 -07 000000476 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 21:42:35.648 -07 000000476 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-17 21:42:35.648 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:35.648 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 36902, sync = True, waitForSettling = False)
17-03-17 21:42:35.658 -07 000000608 INF: Z Motor: Moving to -0.168927 mm, started at -0.168492 mm, distance = -0.43 um
17-03-17 21:42:35.658 -07 000000608 INF: FPGA: Xmit ZDACW 36902\n [Z Motor]
17-03-17 21:42:35.658 -07 000000382 INF: FPGA: Recv YRDPOS 143079
17-03-17 21:42:35.658 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:42:35.658 -07 000000476 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:35.658 -07 000000476 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:35.658 -07 000000476 INF: Y Motor: Moving 1344 steps-20
17-03-17 21:42:35.658 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:42:35.668 -07 000000476 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:35.668 -07 000000608 INF: FPGA: 'ZDACW 36902' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:35.678 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:35.678 -07 000000459 INF: FPGA: Recv ZDACR 36902
17-03-17 21:42:35.688 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:35.688 -07 000000608 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 21:42:35.698 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.963579,
17-03-17 21:42:35.838 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:42:35.838 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:42:35.838 -07 000000012 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:42:35.838 -07 000000012 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:42:35.838 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:35.838 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:35.838 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:42:35.838 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:42:35.838 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:42:35.848 -07 000000012 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:42:36.038 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-17 21:42:36.038 -07 000000476 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-17 21:42:36.078 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:36.088 -07 000000438 INF: FPGA: Recv YRDPOS 144769
17-03-17 21:42:36.088 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-17 21:42:36.088 -07 000000476 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:36.088 -07 000000476 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 21:42:36.088 -07 000000476 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.840 mm, average velocity = 2.181 mm/sec
17-03-17 21:42:36.898 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:36.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:37.038 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:37.038 -07 000000608 INF: FPGA: Recv YRDPOS 144769
17-03-17 21:42:37.048 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:37.048 -07 000000476 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:37.068 -07 000000476 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:37.068 -07 000000476 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:37.068 -07 000000476 INF: Y Motor: Moved to 70.6880 after 1413 ms (table move)
17-03-17 21:42:37.068 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168927 mm (DAC = 36902)
17-03-17 21:42:37.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.078 -07 000000475 INF: FPGA: Recv ZSGSRD 35581
17-03-17 21:42:37.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:42:37.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.078 -07 000000480 INF: FPGA: Recv ZSGSRD 35594
17-03-17 21:42:37.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.088 -07 000000459 INF: FPGA: Recv ZSGSRD 35583
17-03-17 21:42:37.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.098 -07 000000608 INF: FPGA: Recv ZSGSRD 35583
17-03-17 21:42:37.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.108 -07 000000458 INF: FPGA: Recv ZSGSRD 35588
17-03-17 21:42:37.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.118 -07 000000429 INF: FPGA: Recv ZSGSRD 35581
17-03-17 21:42:37.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.128 -07 000000547 INF: FPGA: Recv ZSGSRD 35589
17-03-17 21:42:37.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.138 -07 000000438 INF: FPGA: Recv ZSGSRD 35581
17-03-17 21:42:37.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.148 -07 000000480 INF: FPGA: Recv ZSGSRD 35586
17-03-17 21:42:37.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.158 -07 000000012 INF: FPGA: Recv ZSGSRD 35586
17-03-17 21:42:37.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.168 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:37.168 -07 000000415 INF: FPGA: Recv ZPIEZORD 31643
17-03-17 21:42:37.178 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.178 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.631 V. Piezo Error = -8.7 V.
17-03-17 21:42:37.178 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35585 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35584 (-168.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35581 (-168.0 uncal um), Max = 35594 (-168.1 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:42:37.178 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35585, posNoise = 9, negNoise = 4
17-03-17 21:42:37.178 -07 000000610 INF: Z Motor: After move to -0.168927, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:37.178 -07 000000610 INF: Z Motor: Settle wait time = 1417 ms, measure time = 103 ms (allowed 150 ms), total time = 1520 ms
17-03-17 21:42:37.178 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:37.228 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1572 ms
17-03-17 21:42:37.228 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:37.228 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.168928941075699. ----------
17-03-17 21:42:37.228 -07 000000610 INF: Cycle	54	Tile	14	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:37.228 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36725, sync = True, waitForSettling = True)
17-03-17 21:42:37.228 -07 000000610 INF: Z Motor: Moving to -0.168116 mm, started at -0.168929 mm, distance = 0.81 um
17-03-17 21:42:37.228 -07 000000610 INF: FPGA: Xmit ZDACW 36725\n [Z Motor]
17-03-17 21:42:37.228 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:42:37.238 -07 000000610 INF: FPGA: 'ZDACW 36725' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:37.238 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:37.238 -07 000000429 INF: FPGA: Recv ZDACR 36725
17-03-17 21:42:37.248 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.248 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:37.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.398 -07 000000480 INF: FPGA: Recv ZSGSRD 35456
17-03-17 21:42:37.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.408 -07 000000501 INF: FPGA: Recv ZSGSRD 35461
17-03-17 21:42:37.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.418 -07 000000476 INF: FPGA: Recv ZSGSRD 35458
17-03-17 21:42:37.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.428 -07 000000547 INF: FPGA: Recv ZSGSRD 35463
17-03-17 21:42:37.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.438 -07 000000576 INF: FPGA: Recv ZSGSRD 35453
17-03-17 21:42:37.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.448 -07 000000475 INF: FPGA: Recv ZSGSRD 35455
17-03-17 21:42:37.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.458 -07 000000012 INF: FPGA: Recv ZSGSRD 35467
17-03-17 21:42:37.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.468 -07 000000429 INF: FPGA: Recv ZSGSRD 35460
17-03-17 21:42:37.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.478 -07 000000569 INF: FPGA: Recv ZSGSRD 35461
17-03-17 21:42:37.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:37.488 -07 000000438 INF: FPGA: Recv ZSGSRD 35459
17-03-17 21:42:37.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.498 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:37.498 -07 000000480 INF: FPGA: Recv ZPIEZORD 31428
17-03-17 21:42:37.508 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:37.508 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.604 V. Piezo Error = -8.9 V.
17-03-17 21:42:37.508 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.1 um, Read 10 ADC samples: Avg = 35459 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35460 (-167.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35453 (-167.2 uncal um), Max = 35467 (-167.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:37.508 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35459, posNoise = 8, negNoise = 6
17-03-17 21:42:37.508 -07 000000610 INF: Z Motor: After move to -0.168116, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:37.508 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:42:37.508 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:37.508 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:37.508 -07 000000459 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:37.508 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:37.508 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:37.508 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:37.508 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:37.508 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:37.508 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:37.508 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:37.508 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:37.508 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:37.518 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:42:37.518 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:37.518 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:42:37.518 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:37.528 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:42:37.528 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:42:37.528 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:42:37.528 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:42:37.538 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36902 150\n [Camera]
17-03-17 21:42:37.738 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:38.168 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:38.168 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:38.168 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:38.168 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:38.168 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 21:42:38.178 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:38.178 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:38.178 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:38.178 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:38.178 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 21:42:38.358 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36902 822
17-03-17 21:42:38.508 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:38.548 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:42:38.548 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:42:38.548 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:38.548 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:42:38.548 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:42:38.548 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:38.558 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:42:38.558 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:42:38.558 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:42:38.558 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:42:38.728 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:38.728 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:38.728 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:38.728 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:38.728 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 21:42:38.728 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:38.728 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:38.728 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:38.728 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:38.728 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:42:38.918 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:38.918 -07 000000459 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:38.918 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36902 150' command took 2 ms to send, 1372 ms to get response, and 1381 ms overall
17-03-17 21:42:38.918 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:42:38.918 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68798828125, Z-Position -0.168119490345837. ------
17-03-17 21:42:38.918 -07 000000415 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.17446 mm
17-03-17 21:42:38.918 -07 000000415 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:38.918 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:38.918 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 21:42:38.918 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 38112, sync = True, waitForSettling = False)
17-03-17 21:42:38.918 -07 000000569 INF: Z Motor: Moving to -0.174466 mm, started at -0.168119 mm, distance = -6.35 um
17-03-17 21:42:38.928 -07 000000569 INF: FPGA: Xmit ZDACW 38112\n [Z Motor]
17-03-17 21:42:38.928 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:38.928 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:38.928 -07 000000547 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-17 21:42:38.928 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 21:42:38.938 -07 000000569 INF: FPGA: 'ZDACW 38112' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:38.938 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:42:38.948 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:38.948 -07 000000458 INF: FPGA: Recv YRDPOS 144769
17-03-17 21:42:38.958 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:42:38.958 -07 000000547 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:38.958 -07 000000547 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:38.958 -07 000000547 INF: Y Motor: Moving 1351 steps-30
17-03-17 21:42:38.958 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:38.958 -07 000000424 INF: FPGA: Recv ZDACR 38112
17-03-17 21:42:38.968 -07 000000569 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:42:38.968 -07 000000569 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-17 21:42:38.968 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:39.108 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 388 ms.
17-03-17 21:42:39.108 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:42:39.118 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:39.118 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 21:42:39.118 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:39.118 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:42:39.118 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:42:39.118 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:39.118 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:39.128 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:42:39.138 -07 000000476 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:42:39.138 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 212 ms overall
17-03-17 21:42:39.338 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:42:39.338 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:42:39.378 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:39.388 -07 000000458 INF: FPGA: Recv YRDPOS 146470
17-03-17 21:42:39.388 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:42:39.388 -07 000000547 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:39.388 -07 000000547 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:42:39.388 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.177 mm/sec
17-03-17 21:42:40.338 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:40.338 -07 000000576 INF: FPGA: Recv YRDPOS 146470
17-03-17 21:42:40.348 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:40.348 -07 000000547 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:40.368 -07 000000547 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:40.368 -07 000000547 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:40.368 -07 000000547 INF: Y Motor: Moved to 71.5186 after 1444 ms (table move)
17-03-17 21:42:40.368 -07 000000415 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174466 mm (DAC = 38112)
17-03-17 21:42:40.368 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.378 -07 000000476 INF: FPGA: Recv ZSGSRD 36455
17-03-17 21:42:40.378 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:42:40.378 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.378 -07 000000626 INF: FPGA: Recv ZSGSRD 36446
17-03-17 21:42:40.388 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.388 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.388 -07 000000608 INF: FPGA: Recv ZSGSRD 36448
17-03-17 21:42:40.398 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.398 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.398 -07 000000569 INF: FPGA: Recv ZSGSRD 36445
17-03-17 21:42:40.408 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.408 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.408 -07 000000429 INF: FPGA: Recv ZSGSRD 36452
17-03-17 21:42:40.418 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.418 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.418 -07 000000476 INF: FPGA: Recv ZSGSRD 36450
17-03-17 21:42:40.428 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.428 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.428 -07 000000480 INF: FPGA: Recv ZSGSRD 36448
17-03-17 21:42:40.438 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.438 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.438 -07 000000012 INF: FPGA: Recv ZSGSRD 36438
17-03-17 21:42:40.448 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.448 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.448 -07 000000458 INF: FPGA: Recv ZSGSRD 36445
17-03-17 21:42:40.458 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.458 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:40.458 -07 000000547 INF: FPGA: Recv ZSGSRD 36447
17-03-17 21:42:40.468 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.468 -07 000000415 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:40.468 -07 000000576 INF: FPGA: Recv ZPIEZORD 32768
17-03-17 21:42:40.478 -07 000000415 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:40.478 -07 000000415 INF: Z Motor: Piezo is near 50.0 V (nominally 0 to 100 V), expect near 58.2 V, since DAC is at 5.816 V. Piezo Error = -8.2 V.
17-03-17 21:42:40.478 -07 000000415 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.5 um, Read 10 ADC samples: Avg = 36447 (-173.6 uncal um), Error = 0.9 uncal um, Median = 36448 (-173.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 36438 (-173.5 uncal um), Max = 36455 (-173.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 21:42:40.478 -07 000000415 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36447, posNoise = 8, negNoise = 9
17-03-17 21:42:40.478 -07 000000415 INF: Z Motor: After move to -0.174466, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:40.478 -07 000000415 INF: Z Motor: Settle wait time = 1447 ms, measure time = 103 ms (allowed 150 ms), total time = 1550 ms
17-03-17 21:42:40.478 -07 000000415 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:40.528 -07 000000415 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-17 21:42:40.528 -07 000000415 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:40.528 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:40.528 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:40.528 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:40.528 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:40.528 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:42:40.528 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:40.528 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:40.528 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:42:40.538 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:40.538 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:42:40.548 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:42:40.548 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 21:42:40.548 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:42:40.598 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:42:40.798 -07 000000475 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:42:40.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:42:40.798 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:42:40.798 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) start.
17-03-17 21:42:40.838 -07 000000429 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:42:40.838 -07 000000512 INF: FPGA: Recv CAMSNAP
17-03-17 21:42:40.838 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 284 ms overall
17-03-17 21:42:40.928 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 21:42:40.928 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:40.928 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:42:40.928 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:42:40.938 -07 000000627 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:40.938 -07 000000501 INF: Autofocus start
17-03-17 21:42:40.938 -07 000000501 INF: MeasureProfile start
17-03-17 21:42:40.938 -07 000000459 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:40.948 -07 000000627 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:40.948 -07 000000627 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:42:40.948 -07 000000501 INF: MeasureProfile done
17-03-17 21:42:40.948 -07 000000501 INF: X=0  Z correction [um]=-0.0713522
17-03-17 21:42:40.948 -07 000000501 INF: Autofocus finished
17-03-17 21:42:41.078 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.962185,
17-03-17 21:42:41.148 -07 000000475 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:42:41.148 -07 000000627 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:42:41.148 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.174466611941897. ----------
17-03-17 21:42:41.158 -07 000000610 INF: Cycle	54	Tile	15	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:41.158 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36609, sync = True, waitForSettling = True)
17-03-17 21:42:41.158 -07 000000610 INF: Z Motor: Moving to -0.167585 mm, started at -0.174467 mm, distance = 6.88 um
17-03-17 21:42:41.158 -07 000000610 INF: FPGA: Xmit ZDACW 36609\n [Z Motor]
17-03-17 21:42:41.158 -07 000000569 INF: FPGA: Recv ZDACW
17-03-17 21:42:41.168 -07 000000610 INF: FPGA: 'ZDACW 36609' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:41.168 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:41.168 -07 000000576 INF: FPGA: Recv ZDACR 36609
17-03-17 21:42:41.178 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.178 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:41.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.328 -07 000000431 INF: FPGA: Recv ZSGSRD 35379
17-03-17 21:42:41.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.338 -07 000000626 INF: FPGA: Recv ZSGSRD 35378
17-03-17 21:42:41.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.348 -07 000000475 INF: FPGA: Recv ZSGSRD 35370
17-03-17 21:42:41.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.358 -07 000000424 INF: FPGA: Recv ZSGSRD 35374
17-03-17 21:42:41.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.368 -07 000000569 INF: FPGA: Recv ZSGSRD 35379
17-03-17 21:42:41.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.388 -07 000000382 INF: FPGA: Recv ZSGSRD 35374
17-03-17 21:42:41.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:41.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.408 -07 000000431 INF: FPGA: Recv ZSGSRD 35375
17-03-17 21:42:41.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:41.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.428 -07 000000475 INF: FPGA: Recv ZSGSRD 35378
17-03-17 21:42:41.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:42:41.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.458 -07 000000458 INF: FPGA: Recv ZSGSRD 35381
17-03-17 21:42:41.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:42:41.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:41.468 -07 000000569 INF: FPGA: Recv ZSGSRD 35378
17-03-17 21:42:41.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.478 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:41.478 -07 000000429 INF: FPGA: Recv ZPIEZORD 31375
17-03-17 21:42:41.488 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:41.488 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.586 V. Piezo Error = -8.8 V.
17-03-17 21:42:41.488 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35377 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35378 (-166.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35370 (-166.7 uncal um), Max = 35381 (-166.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:42:41.488 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35377, posNoise = 4, negNoise = 7
17-03-17 21:42:41.488 -07 000000610 INF: Z Motor: After move to -0.167585, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:41.488 -07 000000610 INF: Z Motor: MoveAbsStepped took 328 ms)
17-03-17 21:42:41.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:41.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:41.488 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:41.488 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:41.488 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:41.488 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:41.488 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:41.488 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:41.488 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:41.488 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:41.488 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:41.488 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:41.498 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:41.498 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:41.498 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 7 ms.
17-03-17 21:42:41.498 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:41.518 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:42:41.518 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 25 ms.
17-03-17 21:42:41.518 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:42:41.518 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 26 ms.
17-03-17 21:42:41.518 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36785 150\n [Camera]
17-03-17 21:42:41.718 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:41.898 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:41.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:42.158 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:42.158 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:42.158 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:42.158 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:42.158 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 21:42:42.158 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:42.158 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:42.158 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:42.158 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:42.158 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 21:42:42.348 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36785 822
17-03-17 21:42:42.498 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:42.538 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:42:42.538 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:42:42.538 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:42.538 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 21:42:42.538 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:42:42.538 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:42.548 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:42.548 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:42:42.548 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:42.548 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 21:42:42.708 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:42.708 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:42.708 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:42.838 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:42.838 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:42.838 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:42.838 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-17 21:42:42.838 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:42.848 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:42.848 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:42:42.898 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1377
17-03-17 21:42:42.898 -07 000000459 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:42.898 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36785 150' command took 2 ms to send, 1378 ms to get response, and 1383 ms overall
17-03-17 21:42:42.908 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167834
17-03-17 21:42:42.908 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16783 mm
17-03-17 21:42:42.908 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:42.908 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 21:42:42.908 -07 000000576 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm
17-03-17 21:42:42.908 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:42.908 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 36663, sync = True, waitForSettling = False)
17-03-17 21:42:42.908 -07 000000382 INF: Z Motor: Moving to -0.167832 mm, started at -0.167593 mm, distance = -0.24 um
17-03-17 21:42:42.908 -07 000000627 INF: FPGA: Recv YRDPOS 146470
17-03-17 21:42:42.918 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:42.918 -07 000000576 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:42.918 -07 000000576 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:42.918 -07 000000576 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:42:42.918 -07 000000382 INF: FPGA: Xmit ZDACW 36663\n [Z Motor]
17-03-17 21:42:42.918 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:42:42.928 -07 000000382 INF: FPGA: 'ZDACW 36663' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:42:42.928 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:42.928 -07 000000475 INF: FPGA: Recv ZDACR 36663
17-03-17 21:42:42.938 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:42.938 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:42.938 -07 000000382 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-17 21:42:43.228 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:42:43.228 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:42:43.228 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:43.228 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:43.228 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 21:42:43.228 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:42:43.228 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:43.238 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:43.238 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 528 ms.
17-03-17 21:42:43.238 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 21:42:43.308 -07 000000547 INF: FPGA: Recv YMVTILE
17-03-17 21:42:43.308 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:42:43.348 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:43.358 -07 000000480 INF: FPGA: Recv YRDPOS 148171
17-03-17 21:42:43.358 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:43.358 -07 000000576 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:43.358 -07 000000576 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:42:43.358 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.121 mm/sec
17-03-17 21:42:44.308 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:44.308 -07 000000512 INF: FPGA: Recv YRDPOS 148171
17-03-17 21:42:44.318 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:44.318 -07 000000576 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:44.338 -07 000000576 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:44.338 -07 000000576 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:44.338 -07 000000576 INF: Y Motor: Moved to 72.3491 after 1429 ms (table move)
17-03-17 21:42:44.338 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167832 mm (DAC = 36663)
17-03-17 21:42:44.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.338 -07 000000475 INF: FPGA: Recv ZSGSRD 35408
17-03-17 21:42:44.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:44.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.348 -07 000000431 INF: FPGA: Recv ZSGSRD 35412
17-03-17 21:42:44.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.358 -07 000000012 INF: FPGA: Recv ZSGSRD 35413
17-03-17 21:42:44.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.368 -07 000000458 INF: FPGA: Recv ZSGSRD 35423
17-03-17 21:42:44.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.378 -07 000000576 INF: FPGA: Recv ZSGSRD 35418
17-03-17 21:42:44.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.388 -07 000000438 INF: FPGA: Recv ZSGSRD 35415
17-03-17 21:42:44.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.398 -07 000000480 INF: FPGA: Recv ZSGSRD 35415
17-03-17 21:42:44.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.408 -07 000000415 INF: FPGA: Recv ZSGSRD 35415
17-03-17 21:42:44.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.418 -07 000000429 INF: FPGA: Recv ZSGSRD 35414
17-03-17 21:42:44.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.428 -07 000000512 INF: FPGA: Recv ZSGSRD 35408
17-03-17 21:42:44.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.438 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:44.438 -07 000000476 INF: FPGA: Recv ZPIEZORD 31407
17-03-17 21:42:44.448 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.448 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.594 V. Piezo Error = -8.9 V.
17-03-17 21:42:44.448 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35414 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35414 (-167.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35408 (-166.9 uncal um), Max = 35423 (-167.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:44.448 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35414, posNoise = 9, negNoise = 6
17-03-17 21:42:44.448 -07 000000610 INF: Z Motor: After move to -0.167832, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:44.448 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 105 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:42:44.448 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:44.498 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-17 21:42:44.498 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:44.498 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.167830400799457. ----------
17-03-17 21:42:44.498 -07 000000610 INF: Cycle	54	Tile	16	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:44.498 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36487, sync = True, waitForSettling = True)
17-03-17 21:42:44.498 -07 000000610 INF: Z Motor: Moving to -0.167027 mm, started at -0.167830 mm, distance = 0.80 um
17-03-17 21:42:44.498 -07 000000610 INF: FPGA: Xmit ZDACW 36487\n [Z Motor]
17-03-17 21:42:44.498 -07 000000424 INF: FPGA: Recv ZDACW
17-03-17 21:42:44.508 -07 000000610 INF: FPGA: 'ZDACW 36487' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:44.508 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:44.508 -07 000000547 INF: FPGA: Recv ZDACR 36487
17-03-17 21:42:44.518 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.518 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:44.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.668 -07 000000458 INF: FPGA: Recv ZSGSRD 35289
17-03-17 21:42:44.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:44.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.678 -07 000000480 INF: FPGA: Recv ZSGSRD 35291
17-03-17 21:42:44.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.688 -07 000000459 INF: FPGA: Recv ZSGSRD 35290
17-03-17 21:42:44.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.698 -07 000000429 INF: FPGA: Recv ZSGSRD 35289
17-03-17 21:42:44.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.708 -07 000000627 INF: FPGA: Recv ZSGSRD 35289
17-03-17 21:42:44.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.718 -07 000000012 INF: FPGA: Recv ZSGSRD 35292
17-03-17 21:42:44.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.728 -07 000000431 INF: FPGA: Recv ZSGSRD 35285
17-03-17 21:42:44.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.738 -07 000000512 INF: FPGA: Recv ZSGSRD 35289
17-03-17 21:42:44.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.748 -07 000000429 INF: FPGA: Recv ZSGSRD 35294
17-03-17 21:42:44.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:44.758 -07 000000626 INF: FPGA: Recv ZSGSRD 35290
17-03-17 21:42:44.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:44.768 -07 000000476 INF: FPGA: Recv ZPIEZORD 31216
17-03-17 21:42:44.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:44.778 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.0 V.
17-03-17 21:42:44.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35290 (-166.2 uncal um), Error = 0.9 uncal um, Median = 35290 (-166.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35285 (-166.1 uncal um), Max = 35294 (-166.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:42:44.778 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35290, posNoise = 4, negNoise = 5
17-03-17 21:42:44.778 -07 000000610 INF: Z Motor: After move to -0.167027, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:44.778 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:42:44.778 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:44.778 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:44.778 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:44.778 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:44.778 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:44.778 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:44.778 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:44.778 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:44.778 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:44.778 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:44.778 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:44.778 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:44.778 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:44.788 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:44.788 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:44.788 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:44.798 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:42:44.798 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:42:44.798 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:42:44.798 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:42:44.798 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36663 150\n [Camera]
17-03-17 21:42:44.998 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:45.438 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:45.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:45.438 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:45.438 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:45.438 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:45.448 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:45.448 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:45.448 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 21:42:45.458 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:45.458 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 21:42:45.628 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36663 822
17-03-17 21:42:45.778 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:45.818 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:42:45.818 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-17 21:42:45.828 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:45.828 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 21:42:45.828 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 21:42:45.828 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:45.828 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:45.828 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:42:45.828 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:45.838 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:42:45.988 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:45.988 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:45.998 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:45.998 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:45.998 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:42:45.998 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:45.998 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:45.998 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:46.118 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:46.118 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:42:46.188 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:42:46.188 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:46.188 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36663 150' command took 2 ms to send, 1371 ms to get response, and 1381 ms overall
17-03-17 21:42:46.188 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167526
17-03-17 21:42:46.188 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16753 mm
17-03-17 21:42:46.188 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:46.188 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 21:42:46.188 -07 000000424 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-17 21:42:46.188 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:46.188 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36596, sync = True, waitForSettling = False)
17-03-17 21:42:46.188 -07 000000480 INF: Z Motor: Moving to -0.167526 mm, started at -0.167034 mm, distance = -0.49 um
17-03-17 21:42:46.188 -07 000000475 INF: FPGA: Recv YRDPOS 148171
17-03-17 21:42:46.198 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:42:46.198 -07 000000424 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:46.198 -07 000000424 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:46.198 -07 000000424 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:42:46.198 -07 000000480 INF: FPGA: Xmit ZDACW 36596\n [Z Motor]
17-03-17 21:42:46.198 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:42:46.208 -07 000000480 INF: FPGA: 'ZDACW 36596' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:42:46.208 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:46.208 -07 000000382 INF: FPGA: Recv ZDACR 36596
17-03-17 21:42:46.218 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:46.218 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:46.218 -07 000000480 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 21:42:46.388 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 21:42:46.388 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:42:46.388 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:46.398 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:42:46.398 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:42:46.438 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.005817,
17-03-17 21:42:46.498 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:42:46.498 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:42:46.498 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:46.498 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:46.508 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 512 ms.
17-03-17 21:42:46.588 -07 000000415 INF: FPGA: Recv YMVTILE
17-03-17 21:42:46.588 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:42:46.628 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:46.638 -07 000000438 INF: FPGA: Recv YRDPOS 149863
17-03-17 21:42:46.638 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:46.638 -07 000000424 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:46.638 -07 000000424 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-17 21:42:46.638 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.119 mm/sec
17-03-17 21:42:46.898 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:46.898 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:47.588 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:47.588 -07 000000429 INF: FPGA: Recv YRDPOS 149864
17-03-17 21:42:47.598 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:47.598 -07 000000424 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:47.618 -07 000000424 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:47.618 -07 000000424 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:42:47.618 -07 000000424 INF: Y Motor: Moved to 73.1758 after 1426 ms (table move)
17-03-17 21:42:47.618 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167526 mm (DAC = 36596)
17-03-17 21:42:47.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.618 -07 000000608 INF: FPGA: Recv ZSGSRD 35370
17-03-17 21:42:47.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:47.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.628 -07 000000382 INF: FPGA: Recv ZSGSRD 35361
17-03-17 21:42:47.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.638 -07 000000012 INF: FPGA: Recv ZSGSRD 35369
17-03-17 21:42:47.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.648 -07 000000569 INF: FPGA: Recv ZSGSRD 35370
17-03-17 21:42:47.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.658 -07 000000431 INF: FPGA: Recv ZSGSRD 35367
17-03-17 21:42:47.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.668 -07 000000627 INF: FPGA: Recv ZSGSRD 35367
17-03-17 21:42:47.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.678 -07 000000459 INF: FPGA: Recv ZSGSRD 35366
17-03-17 21:42:47.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.688 -07 000000547 INF: FPGA: Recv ZSGSRD 35365
17-03-17 21:42:47.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.698 -07 000000458 INF: FPGA: Recv ZSGSRD 35358
17-03-17 21:42:47.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.708 -07 000000431 INF: FPGA: Recv ZSGSRD 35364
17-03-17 21:42:47.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.718 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:47.718 -07 000000512 INF: FPGA: Recv ZPIEZORD 31329
17-03-17 21:42:47.728 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.728 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.584 V. Piezo Error = -8.9 V.
17-03-17 21:42:47.728 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35366 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35366 (-166.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35358 (-166.6 uncal um), Max = 35370 (-166.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:42:47.728 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35366, posNoise = 4, negNoise = 8
17-03-17 21:42:47.728 -07 000000610 INF: Z Motor: After move to -0.167526, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:47.728 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 104 ms (allowed 150 ms), total time = 1533 ms
17-03-17 21:42:47.728 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:47.778 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:42:47.778 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:47.778 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.167522038616653. ----------
17-03-17 21:42:47.778 -07 000000610 INF: Cycle	54	Tile	17	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:47.778 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36419, sync = True, waitForSettling = True)
17-03-17 21:42:47.778 -07 000000610 INF: Z Motor: Moving to -0.166715 mm, started at -0.167522 mm, distance = 0.81 um
17-03-17 21:42:47.778 -07 000000610 INF: FPGA: Xmit ZDACW 36419\n [Z Motor]
17-03-17 21:42:47.778 -07 000000438 INF: FPGA: Recv ZDACW
17-03-17 21:42:47.788 -07 000000610 INF: FPGA: 'ZDACW 36419' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:42:47.788 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:47.788 -07 000000012 INF: FPGA: Recv ZDACR 36419
17-03-17 21:42:47.798 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.798 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:47.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.948 -07 000000429 INF: FPGA: Recv ZSGSRD 35243
17-03-17 21:42:47.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:47.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.958 -07 000000382 INF: FPGA: Recv ZSGSRD 35242
17-03-17 21:42:47.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.968 -07 000000512 INF: FPGA: Recv ZSGSRD 35242
17-03-17 21:42:47.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.978 -07 000000476 INF: FPGA: Recv ZSGSRD 35247
17-03-17 21:42:47.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.988 -07 000000431 INF: FPGA: Recv ZSGSRD 35239
17-03-17 21:42:47.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:47.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:47.998 -07 000000626 INF: FPGA: Recv ZSGSRD 35243
17-03-17 21:42:48.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:48.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:48.008 -07 000000382 INF: FPGA: Recv ZSGSRD 35242
17-03-17 21:42:48.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:48.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:48.018 -07 000000512 INF: FPGA: Recv ZSGSRD 35239
17-03-17 21:42:48.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:48.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:48.028 -07 000000424 INF: FPGA: Recv ZSGSRD 35241
17-03-17 21:42:48.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:48.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:48.038 -07 000000012 INF: FPGA: Recv ZSGSRD 35242
17-03-17 21:42:48.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:48.048 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:48.048 -07 000000438 INF: FPGA: Recv ZPIEZORD 31135
17-03-17 21:42:48.058 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:48.058 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.557 V. Piezo Error = -9.1 V.
17-03-17 21:42:48.058 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35242 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35242 (-165.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35239 (-165.8 uncal um), Max = 35247 (-165.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:42:48.058 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35242, posNoise = 5, negNoise = 3
17-03-17 21:42:48.058 -07 000000610 INF: Z Motor: After move to -0.166715, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:48.058 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:42:48.058 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:48.058 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:48.058 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:48.058 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:48.058 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:48.058 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:48.058 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:48.058 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:48.058 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:48.058 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:48.058 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:48.058 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:48.058 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:48.058 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:48.068 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:48.068 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:48.078 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:42:48.078 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:42:48.078 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:42:48.078 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:42:48.078 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36596 150\n [Camera]
17-03-17 21:42:48.278 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:48.718 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:48.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:48.718 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:48.718 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:48.718 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:42:48.718 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:48.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:48.718 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:48.728 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:48.728 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:42:48.908 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36596 822
17-03-17 21:42:49.058 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:49.118 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 399 ms.
17-03-17 21:42:49.118 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:42:49.118 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:49.128 -07 000000627 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 21:42:49.128 -07 000000627 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:42:49.128 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:49.128 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:49.128 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 21:42:49.128 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:49.138 -07 000000627 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-17 21:42:49.268 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:49.268 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:49.268 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:49.268 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:49.278 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:42:49.278 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:49.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:49.278 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:49.278 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:49.278 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:42:49.468 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:49.468 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:49.468 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36596 150' command took 2 ms to send, 1370 ms to get response, and 1381 ms overall
17-03-17 21:42:49.468 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.167076
17-03-17 21:42:49.468 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16708 mm
17-03-17 21:42:49.468 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:49.468 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 21:42:49.468 -07 000000501 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-17 21:42:49.468 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:49.468 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 36498, sync = True, waitForSettling = False)
17-03-17 21:42:49.468 -07 000000569 INF: Z Motor: Moving to -0.167077 mm, started at -0.166725 mm, distance = -0.35 um
17-03-17 21:42:49.468 -07 000000480 INF: FPGA: Recv YRDPOS 149864
17-03-17 21:42:49.478 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:42:49.478 -07 000000501 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:49.478 -07 000000501 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:49.478 -07 000000501 INF: Y Motor: Moving 1355 steps-35
17-03-17 21:42:49.478 -07 000000569 INF: FPGA: Xmit ZDACW 36498\n [Z Motor]
17-03-17 21:42:49.478 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:42:49.488 -07 000000569 INF: FPGA: 'ZDACW 36498' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:42:49.488 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:49.488 -07 000000547 INF: FPGA: Recv ZDACR 36498
17-03-17 21:42:49.498 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:49.498 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:49.498 -07 000000569 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:42:49.658 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:42:49.658 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 21:42:49.658 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:42:49.658 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:49.658 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:42:49.658 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:49.658 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:49.658 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:49.658 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:42:49.668 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:42:49.868 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:42:49.868 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:42:49.908 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:49.908 -07 000000382 INF: FPGA: Recv YRDPOS 151567
17-03-17 21:42:49.918 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:49.918 -07 000000501 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:49.918 -07 000000501 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 21:42:49.918 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.847 mm, average velocity = 2.128 mm/sec
17-03-17 21:42:50.868 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:50.868 -07 000000547 INF: FPGA: Recv YRDPOS 151567
17-03-17 21:42:50.878 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.878 -07 000000501 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:50.888 -07 000000501 INF: Y Motor: After move to 74.022606, error = -0.015282, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:50.888 -07 000000501 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:50.888 -07 000000501 INF: Y Motor: Moved to 74.0073 after 1422 ms (table move)
17-03-17 21:42:50.898 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167077 mm (DAC = 36498)
17-03-17 21:42:50.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.898 -07 000000382 INF: FPGA: Recv ZSGSRD 35299
17-03-17 21:42:50.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.908 -07 000000476 INF: FPGA: Recv ZSGSRD 35306
17-03-17 21:42:50.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.918 -07 000000429 INF: FPGA: Recv ZSGSRD 35302
17-03-17 21:42:50.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.928 -07 000000458 INF: FPGA: Recv ZSGSRD 35308
17-03-17 21:42:50.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.938 -07 000000438 INF: FPGA: Recv ZSGSRD 35298
17-03-17 21:42:50.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.948 -07 000000415 INF: FPGA: Recv ZSGSRD 35303
17-03-17 21:42:50.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.958 -07 000000459 INF: FPGA: Recv ZSGSRD 35302
17-03-17 21:42:50.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.968 -07 000000415 INF: FPGA: Recv ZSGSRD 35298
17-03-17 21:42:50.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.978 -07 000000475 INF: FPGA: Recv ZSGSRD 35297
17-03-17 21:42:50.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:50.988 -07 000000501 INF: FPGA: Recv ZSGSRD 35298
17-03-17 21:42:50.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:50.998 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:50.998 -07 000000458 INF: FPGA: Recv ZPIEZORD 31245
17-03-17 21:42:51.008 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.008 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.569 V. Piezo Error = -8.9 V.
17-03-17 21:42:51.008 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35301 (-166.2 uncal um), Error = 0.8 uncal um, Median = 35300 (-166.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35297 (-166.2 uncal um), Max = 35308 (-166.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:42:51.008 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35301, posNoise = 7, negNoise = 4
17-03-17 21:42:51.008 -07 000000610 INF: Z Motor: After move to -0.167077, error = -0.000027, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:51.008 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 111 ms (allowed 150 ms), total time = 1535 ms
17-03-17 21:42:51.008 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:51.048 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1576 ms
17-03-17 21:42:51.048 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:51.048 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00732421875, Z-position -0.167104464827439. ----------
17-03-17 21:42:51.048 -07 000000610 INF: Cycle	54	Tile	18	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:51.048 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36321, sync = True, waitForSettling = True)
17-03-17 21:42:51.048 -07 000000610 INF: Z Motor: Moving to -0.166267 mm, started at -0.167104 mm, distance = 0.84 um
17-03-17 21:42:51.048 -07 000000610 INF: FPGA: Xmit ZDACW 36321\n [Z Motor]
17-03-17 21:42:51.058 -07 000000608 INF: FPGA: Recv ZDACW
17-03-17 21:42:51.058 -07 000000610 INF: FPGA: 'ZDACW 36321' command took 0 ms to send, 1 ms to get response, and 6 ms overall
17-03-17 21:42:51.058 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:51.058 -07 000000382 INF: FPGA: Recv ZDACR 36321
17-03-17 21:42:51.068 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:51.068 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:51.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.218 -07 000000438 INF: FPGA: Recv ZSGSRD 35173
17-03-17 21:42:51.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:51.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.228 -07 000000476 INF: FPGA: Recv ZSGSRD 35175
17-03-17 21:42:51.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.238 -07 000000475 INF: FPGA: Recv ZSGSRD 35178
17-03-17 21:42:51.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.248 -07 000000501 INF: FPGA: Recv ZSGSRD 35177
17-03-17 21:42:51.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.258 -07 000000569 INF: FPGA: Recv ZSGSRD 35169
17-03-17 21:42:51.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.268 -07 000000626 INF: FPGA: Recv ZSGSRD 35172
17-03-17 21:42:51.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.278 -07 000000382 INF: FPGA: Recv ZSGSRD 35180
17-03-17 21:42:51.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.288 -07 000000429 INF: FPGA: Recv ZSGSRD 35167
17-03-17 21:42:51.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.298 -07 000000424 INF: FPGA: Recv ZSGSRD 35175
17-03-17 21:42:51.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:51.308 -07 000000608 INF: FPGA: Recv ZSGSRD 35173
17-03-17 21:42:51.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.318 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:51.318 -07 000000415 INF: FPGA: Recv ZPIEZORD 31057
17-03-17 21:42:51.328 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:51.328 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.542 V. Piezo Error = -9.1 V.
17-03-17 21:42:51.328 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.3 um, Read 10 ADC samples: Avg = 35174 (-165.4 uncal um), Error = 0.8 uncal um, Median = 35174 (-165.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35167 (-165.4 uncal um), Max = 35180 (-165.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:42:51.328 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35174, posNoise = 6, negNoise = 7
17-03-17 21:42:51.328 -07 000000610 INF: Z Motor: After move to -0.166267, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:51.328 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:42:51.328 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:51.328 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:51.328 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:51.328 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:51.328 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:51.328 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:51.328 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:51.328 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:51.328 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:51.328 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:51.328 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:51.328 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:51.328 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:42:51.328 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:51.338 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:42:51.338 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:51.348 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:42:51.348 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:42:51.348 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:42:51.348 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:42:51.348 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36498 150\n [Camera]
17-03-17 21:42:51.558 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:51.808 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.045313,
17-03-17 21:42:51.908 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:51.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:51.988 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:51.988 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:51.988 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:51.988 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:51.988 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:42:51.988 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:51.988 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:51.998 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:51.998 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:51.998 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:42:52.178 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36498 822
17-03-17 21:42:52.328 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:52.378 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 388 ms.
17-03-17 21:42:52.378 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 21:42:52.378 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:52.378 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 388 ms.
17-03-17 21:42:52.378 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:42:52.378 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:52.378 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:52.378 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:42:52.388 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:52.388 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:42:52.538 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:52.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:52.548 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:52.548 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:52.548 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:42:52.548 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:52.548 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:52.548 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:52.548 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:52.548 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:42:52.738 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:52.738 -07 000000626 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:52.738 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36498 150' command took 2 ms to send, 1373 ms to get response, and 1384 ms overall
17-03-17 21:42:52.738 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 21:42:52.738 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.00732421875, Z-Position -0.166288589885435. ------
17-03-17 21:42:52.738 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:52.738 -07 000000438 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.17273 mm
17-03-17 21:42:52.738 -07 000000438 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:52.748 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:52.748 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:42:52.748 -07 000000476 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:42:52.748 -07 000000415 INF: Z Motor: Entering MoveAbsStepped (DAC = 37733, sync = True, waitForSettling = False)
17-03-17 21:42:52.748 -07 000000382 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 21:42:52.748 -07 000000382 INF: Y Motor: Moving to 74.8526 mm, started at 74.0073 mm, delta = 0.8453 mm
17-03-17 21:42:52.748 -07 000000415 INF: Z Motor: Moving to -0.172731 mm, started at -0.166289 mm, distance = -6.44 um
17-03-17 21:42:52.758 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:52.758 -07 000000576 INF: FPGA: Recv YRDPOS 151567
17-03-17 21:42:52.768 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 21:42:52.768 -07 000000382 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:52.768 -07 000000382 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:42:52.768 -07 000000382 INF: Y Motor: Moving 1352 steps-31
17-03-17 21:42:52.768 -07 000000415 INF: FPGA: Xmit ZDACW 37733\n [Z Motor]
17-03-17 21:42:52.768 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:42:52.778 -07 000000415 INF: FPGA: 'ZDACW 37733' command took 1 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 21:42:52.778 -07 000000415 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:52.778 -07 000000627 INF: FPGA: Recv ZDACR 37733
17-03-17 21:42:52.788 -07 000000382 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:42:52.788 -07 000000415 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:52.788 -07 000000415 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-17 21:42:52.928 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:42:52.928 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:42:52.928 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:52.928 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:42:52.928 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:42:52.928 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:52.928 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:52.928 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:42:52.928 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:42:52.938 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:42:52.948 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:42:52.948 -07 000000476 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-17 21:42:53.158 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-17 21:42:53.158 -07 000000382 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:42:53.188 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:53.188 -07 000000512 INF: FPGA: Recv YRDPOS 153255
17-03-17 21:42:53.198 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:53.198 -07 000000382 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:53.198 -07 000000382 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-17 21:42:53.198 -07 000000382 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.845 mm, average velocity = 2.124 mm/sec
17-03-17 21:42:54.148 -07 000000382 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:54.148 -07 000000626 INF: FPGA: Recv YRDPOS 153255
17-03-17 21:42:54.158 -07 000000382 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:54.158 -07 000000382 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:54.168 -07 000000382 INF: Y Motor: After move to 74.852608, error = -0.021065, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:42:54.168 -07 000000382 INF: Y Motor: Position error after settling (table move) = -43 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:42:54.168 -07 000000382 INF: Y Motor: Moved to 74.8315 after 1424 ms (table move)
17-03-17 21:42:54.178 -07 000000438 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172731 mm (DAC = 37733)
17-03-17 21:42:54.178 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.178 -07 000000626 INF: FPGA: Recv ZSGSRD 36183
17-03-17 21:42:54.188 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.188 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.188 -07 000000458 INF: FPGA: Recv ZSGSRD 36174
17-03-17 21:42:54.198 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.198 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.198 -07 000000480 INF: FPGA: Recv ZSGSRD 36175
17-03-17 21:42:54.208 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.208 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.208 -07 000000501 INF: FPGA: Recv ZSGSRD 36182
17-03-17 21:42:54.218 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.218 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.218 -07 000000627 INF: FPGA: Recv ZSGSRD 36174
17-03-17 21:42:54.228 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:42:54.228 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.228 -07 000000576 INF: FPGA: Recv ZSGSRD 36179
17-03-17 21:42:54.238 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.238 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.238 -07 000000475 INF: FPGA: Recv ZSGSRD 36180
17-03-17 21:42:54.248 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.248 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.248 -07 000000415 INF: FPGA: Recv ZSGSRD 36180
17-03-17 21:42:54.258 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.258 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.258 -07 000000476 INF: FPGA: Recv ZSGSRD 36179
17-03-17 21:42:54.268 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.268 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:54.268 -07 000000627 INF: FPGA: Recv ZSGSRD 36184
17-03-17 21:42:54.278 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.278 -07 000000438 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:54.278 -07 000000459 INF: FPGA: Recv ZPIEZORD 32425
17-03-17 21:42:54.288 -07 000000438 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:54.288 -07 000000438 INF: Z Motor: Piezo is near 49.3 V (nominally 0 to 100 V), expect near 57.6 V, since DAC is at 5.758 V. Piezo Error = -8.3 V.
17-03-17 21:42:54.288 -07 000000438 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.7 um, Read 10 ADC samples: Avg = 36179 (-171.9 uncal um), Error = 0.9 uncal um, Median = 36180 (-171.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36174 (-171.8 uncal um), Max = 36184 (-171.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:42:54.288 -07 000000438 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36179, posNoise = 5, negNoise = 5
17-03-17 21:42:54.288 -07 000000438 INF: Z Motor: After move to -0.172731, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:54.288 -07 000000438 INF: Z Motor: Settle wait time = 1427 ms, measure time = 110 ms (allowed 150 ms), total time = 1537 ms
17-03-17 21:42:54.288 -07 000000438 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:42:54.328 -07 000000438 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms
17-03-17 21:42:54.328 -07 000000438 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:42:54.328 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:54.328 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:54.328 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:54.328 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:54.328 -07 000000627 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:42:54.328 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:54.328 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:42:54.328 -07 000000627 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:42:54.338 -07 000000627 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:54.338 -07 000000627 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:42:54.348 -07 000000627 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 21:42:54.348 -07 000000627 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 21:42:54.348 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:42:54.398 -07 000000547 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:42:54.598 -07 000000459 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:42:54.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:42:54.598 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:42:54.718 -07 000000429 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:42:54.718 -07 000000429 INF: FPGA: Recv CAMSNAP
17-03-17 21:42:54.718 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 364 ms to get response, and 368 ms overall
17-03-17 21:42:54.718 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) start.
17-03-17 21:42:54.848 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:42:54.848 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:54.848 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:42:54.848 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 247 ms.
17-03-17 21:42:54.918 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:54.918 -07 000000415 INF: Autofocus start
17-03-17 21:42:54.918 -07 000000415 INF: MeasureProfile start
17-03-17 21:42:54.918 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:54.928 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:54.928 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:42:54.928 -07 000000415 INF: MeasureProfile done
17-03-17 21:42:54.928 -07 000000415 INF: X=0  Z correction [um]=-0.0713522
17-03-17 21:42:54.928 -07 000000415 INF: Autofocus finished
17-03-17 21:42:55.128 -07 000000626 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:42:55.128 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall
17-03-17 21:42:55.128 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83154296875, Z-position -0.172744923087905. ----------
17-03-17 21:42:55.138 -07 000000610 INF: Cycle	54	Tile	19	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:42:55.138 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36230, sync = True, waitForSettling = True)
17-03-17 21:42:55.138 -07 000000610 INF: Z Motor: Moving to -0.165850 mm, started at -0.172745 mm, distance = 6.89 um
17-03-17 21:42:55.138 -07 000000610 INF: FPGA: Xmit ZDACW 36230\n [Z Motor]
17-03-17 21:42:55.138 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:42:55.148 -07 000000610 INF: FPGA: 'ZDACW 36230' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:55.148 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:55.148 -07 000000012 INF: FPGA: Recv ZDACR 36230
17-03-17 21:42:55.158 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.158 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:42:55.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.308 -07 000000576 INF: FPGA: Recv ZSGSRD 35112
17-03-17 21:42:55.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:42:55.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.318 -07 000000438 INF: FPGA: Recv ZSGSRD 35113
17-03-17 21:42:55.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.328 -07 000000512 INF: FPGA: Recv ZSGSRD 35103
17-03-17 21:42:55.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.338 -07 000000415 INF: FPGA: Recv ZSGSRD 35107
17-03-17 21:42:55.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.348 -07 000000627 INF: FPGA: Recv ZSGSRD 35107
17-03-17 21:42:55.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.358 -07 000000608 INF: FPGA: Recv ZSGSRD 35115
17-03-17 21:42:55.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.368 -07 000000547 INF: FPGA: Recv ZSGSRD 35106
17-03-17 21:42:55.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.378 -07 000000626 INF: FPGA: Recv ZSGSRD 35107
17-03-17 21:42:55.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.388 -07 000000431 INF: FPGA: Recv ZSGSRD 35110
17-03-17 21:42:55.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:42:55.398 -07 000000501 INF: FPGA: Recv ZSGSRD 35108
17-03-17 21:42:55.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.408 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:42:55.408 -07 000000626 INF: FPGA: Recv ZPIEZORD 31020
17-03-17 21:42:55.418 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:55.418 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.528 V. Piezo Error = -9.0 V.
17-03-17 21:42:55.418 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35109 (-165.0 uncal um), Error = 0.8 uncal um, Median = 35108 (-165.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35103 (-165.0 uncal um), Max = 35115 (-165.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:42:55.418 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35109, posNoise = 6, negNoise = 6
17-03-17 21:42:55.418 -07 000000610 INF: Z Motor: After move to -0.165850, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:42:55.418 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 21:42:55.418 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:42:55.418 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:42:55.418 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:42:55.418 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:42:55.418 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:42:55.418 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:42:55.418 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:42:55.418 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:42:55.418 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:42:55.418 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:42:55.418 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:42:55.418 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:42:55.418 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:42:55.418 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:42:55.428 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:42:55.428 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:42:55.428 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:42:55.428 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:42:55.428 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:42:55.428 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:42:55.438 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 36406 150\n [Camera]
17-03-17 21:42:55.638 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:42:56.068 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:42:56.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:42:56.078 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:56.078 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:42:56.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:42:56.078 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:56.078 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:56.078 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:42:56.078 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:56.078 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:42:56.268 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36406 822
17-03-17 21:42:56.418 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:42:56.458 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:42:56.458 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:42:56.458 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:56.458 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:42:56.458 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:42:56.458 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:56.458 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:56.458 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:42:56.458 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:42:56.468 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:42:56.628 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:42:56.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:42:56.628 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:42:56.628 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:42:56.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:42:56.628 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:42:56.628 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:42:56.628 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:42:56.748 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:42:56.748 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:42:56.818 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:42:56.818 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:42:56.818 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 36406 150' command took 3 ms to send, 1373 ms to get response, and 1382 ms overall
17-03-17 21:42:56.908 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:42:56.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:42:57.018 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 21:42:57.018 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:42:57.018 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:57.028 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:57.028 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:42:57.028 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 21:42:57.068 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-17 21:42:57.128 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 21:42:57.128 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:42:57.128 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:42:57.138 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:42:57.138 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 511 ms.
17-03-17 21:42:57.138 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 21:42:57.178 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.024884,
17-03-17 21:42:57.188 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-17 21:42:57.188 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-17 21:42:57.198 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 21:42:57.198 -07 000000501 INF: FPGA: Recv EMCUR 
17-03-17 21:42:57.208 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 21:42:57.228 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-17 21:42:57.728 -07 000000012 INF: FPGA: Recv EMIN
17-03-17 21:42:57.728 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 492 ms to get response, and 522 ms overall
17-03-17 21:42:57.728 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-17 21:42:57.728 -07 000000438 INF: FPGA: Recv EMCUR 
17-03-17 21:42:57.738 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:42:57.738 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:42:57.738 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83154296875, Z-Position -0.16587101609622. ------
17-03-17 21:42:57.738 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:42:57.738 -07 000000382 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.14043 mm
17-03-17 21:42:57.738 -07 000000382 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:42:57.748 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 21:42:57.748 -07 000000012 INF: Y Motor: Moving to 59.9126 mm, started at 74.8315 mm, delta = -14.9189 mm
17-03-17 21:42:57.748 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:42:57.748 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:42:57.748 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:42:57.748 -07 000000459 INF: Z Motor: Entering MoveAbsStepped (DAC = 30676, sync = True, waitForSettling = False)
17-03-17 21:42:57.748 -07 000000459 INF: Z Motor: Moving to -0.140426 mm, started at -0.165871 mm, distance = 25.45 um
17-03-17 21:42:57.748 -07 000000475 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:42:57.758 -07 000000459 INF: FPGA: Xmit ZDACW 30676\n [Z Motor]
17-03-17 21:42:57.758 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:42:57.758 -07 000000012 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:42:57.758 -07 000000480 INF: FPGA: Recv ZDACW
17-03-17 21:42:57.758 -07 000000012 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-17 21:42:57.758 -07 000000012 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 21:42:57.768 -07 000000512 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:42:57.768 -07 000000459 INF: FPGA: 'ZDACW 30676' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:42:57.778 -07 000000012 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 21:42:57.788 -07 000000459 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:42:57.788 -07 000000415 INF: FPGA: Recv ZDACR 30676
17-03-17 21:42:57.798 -07 000000459 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:42:57.798 -07 000000459 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet))
17-03-17 21:42:57.968 -07 000000480 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:42:57.968 -07 000000512 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 21:42:59.408 -07 000000476 INF: FPGA: Recv YMVTO 122703 23903
17-03-17 21:42:59.408 -07 000000012 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1621 ms to get response, and 1645 ms overall
17-03-17 21:42:59.408 -07 000000012 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 21:42:59.408 -07 000000012 INF: Y Motor: To move from 74.832 to 59.913 (-14.919 mm) should take 23871 steps, but required 23903 steps (14.939 mm). Slippage = 0.020 mm (0.00%).
17-03-17 21:42:59.408 -07 000000012 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1645 ms, distance = 14.919 mm, average velocity = 9.069 mm/sec
17-03-17 21:43:01.908 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:01.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:02.258 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:02.258 -07 000000476 INF: FPGA: Recv YRDPOS 122698
17-03-17 21:43:02.268 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:02.268 -07 000000012 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:02.298 -07 000000012 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:02.298 -07 000000012 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-17 21:43:02.298 -07 000000012 INF: Y Motor: Moved to 59.9111 after 4551 ms
17-03-17 21:43:02.298 -07 000000382 INF: Z Motor: EndOfMoveAbsStepped: target = -0.140426 mm (DAC = 30676)
17-03-17 21:43:02.298 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.308 -07 000000480 INF: FPGA: Recv ZSGSRD 31157
17-03-17 21:43:02.308 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-17 21:43:02.308 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.308 -07 000000424 INF: FPGA: Recv ZSGSRD 31148
17-03-17 21:43:02.318 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:43:02.318 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.318 -07 000000569 INF: FPGA: Recv ZSGSRD 31142
17-03-17 21:43:02.328 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.328 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.328 -07 000000431 INF: FPGA: Recv ZSGSRD 31147
17-03-17 21:43:02.338 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.338 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.338 -07 000000512 INF: FPGA: Recv ZSGSRD 31154
17-03-17 21:43:02.348 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.348 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.348 -07 000000458 INF: FPGA: Recv ZSGSRD 31150
17-03-17 21:43:02.358 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.358 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.358 -07 000000576 INF: FPGA: Recv ZSGSRD 31138
17-03-17 21:43:02.368 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.368 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.368 -07 000000627 INF: FPGA: Recv ZSGSRD 31143
17-03-17 21:43:02.378 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.378 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.378 -07 000000438 INF: FPGA: Recv ZSGSRD 31152
17-03-17 21:43:02.388 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.388 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:02.388 -07 000000512 INF: FPGA: Recv ZSGSRD 31154
17-03-17 21:43:02.398 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.398 -07 000000382 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:02.398 -07 000000458 INF: FPGA: Recv ZPIEZORD 26833
17-03-17 21:43:02.408 -07 000000382 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:02.408 -07 000000382 INF: Z Motor: Piezo is near 37.3 V (nominally 0 to 100 V), expect near 46.8 V, since DAC is at 4.681 V. Piezo Error = -9.5 V.
17-03-17 21:43:02.408 -07 000000382 INF: Z Motor: ReadAdcAverage: Commanded Z = -140.4 um, Read 10 ADC samples: Avg = 31148 (-139.6 uncal um), Error = 0.8 uncal um, Median = 31149 (-139.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 31138 (-139.6 uncal um), Max = 31157 (-139.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:43:02.408 -07 000000382 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31148, posNoise = 9, negNoise = 10
17-03-17 21:43:02.408 -07 000000382 INF: Z Motor: After move to -0.140426, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:02.408 -07 000000382 INF: Z Motor: Settle wait time = 4554 ms, measure time = 105 ms (allowed 150 ms), total time = 4659 ms
17-03-17 21:43:02.408 -07 000000382 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:02.458 -07 000000382 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4712 ms
17-03-17 21:43:02.458 -07 000000382 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:02.458 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:02.458 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:02.458 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:02.458 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:02.458 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:43:02.458 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:02.458 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:02.458 -07 000000512 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 21:43:02.488 -07 000000512 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 21:43:02.488 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:43:02.488 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 21:43:02.488 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:43:02.508 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 21:43:02.508 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 43 ms.
17-03-17 21:43:02.508 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:43:02.548 -07 000000569 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:43:02.568 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.018051,
17-03-17 21:43:02.748 -07 000000458 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:43:02.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:43:02.748 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:43:02.758 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 21:43:02.788 -07 000000475 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:43:02.788 -07 000000547 INF: FPGA: Recv CAMSNAP
17-03-17 21:43:02.788 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 277 ms to get response, and 285 ms overall
17-03-17 21:43:02.878 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:43:02.878 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:02.878 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:43:02.878 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:43:02.988 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:02.988 -07 000000429 INF: Image SNR check: start
17-03-17 21:43:02.988 -07 000000459 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:02.998 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:43:02.998 -07 000000458 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:43:02.998 -07 000000429 INF: Image SNR check: pass  [peak (Max-Min)=55.22]
17-03-17 21:43:02.998 -07 000000429 INF: Autofocus start
17-03-17 21:43:02.998 -07 000000429 INF: MeasureProfile start
17-03-17 21:43:03.008 -07 000000429 INF: MeasureProfile done
17-03-17 21:43:03.008 -07 000000429 INF: X=16  Z correction [um]=0.0530179
17-03-17 21:43:03.008 -07 000000429 INF: Autofocus finished
17-03-17 21:43:03.198 -07 000000512 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:43:03.198 -07 000000458 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:43:03.198 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.140424711802705. ----------
17-03-17 21:43:03.198 -07 000000610 INF: Cycle	54	Tile	1	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:03.208 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29200, sync = True, waitForSettling = True)
17-03-17 21:43:03.208 -07 000000610 INF: Z Motor: Moving to -0.133669 mm, started at -0.140425 mm, distance = 6.76 um
17-03-17 21:43:03.208 -07 000000610 INF: FPGA: Xmit ZDACW 29200\n [Z Motor]
17-03-17 21:43:03.208 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:43:03.218 -07 000000610 INF: FPGA: 'ZDACW 29200' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.218 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:03.218 -07 000000459 INF: FPGA: Recv ZDACR 29200
17-03-17 21:43:03.228 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.228 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:03.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.378 -07 000000431 INF: FPGA: Recv ZSGSRD 30097
17-03-17 21:43:03.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:03.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.388 -07 000000627 INF: FPGA: Recv ZSGSRD 30093
17-03-17 21:43:03.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.398 -07 000000382 INF: FPGA: Recv ZSGSRD 30094
17-03-17 21:43:03.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.408 -07 000000475 INF: FPGA: Recv ZSGSRD 30095
17-03-17 21:43:03.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.418 -07 000000627 INF: FPGA: Recv ZSGSRD 30096
17-03-17 21:43:03.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.428 -07 000000424 INF: FPGA: Recv ZSGSRD 30093
17-03-17 21:43:03.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.438 -07 000000415 INF: FPGA: Recv ZSGSRD 30094
17-03-17 21:43:03.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.448 -07 000000569 INF: FPGA: Recv ZSGSRD 30102
17-03-17 21:43:03.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.458 -07 000000429 INF: FPGA: Recv ZSGSRD 30091
17-03-17 21:43:03.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:03.468 -07 000000576 INF: FPGA: Recv ZSGSRD 30095
17-03-17 21:43:03.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.478 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:03.478 -07 000000512 INF: FPGA: Recv ZPIEZORD 25724
17-03-17 21:43:03.488 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:03.488 -07 000000610 INF: Z Motor: Piezo is near 35.0 V (nominally 0 to 100 V), expect near 44.6 V, since DAC is at 4.456 V. Piezo Error = -9.6 V.
17-03-17 21:43:03.488 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.7 um, Read 10 ADC samples: Avg = 30095 (-132.9 uncal um), Error = 0.8 uncal um, Median = 30094 (-132.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30091 (-132.8 uncal um), Max = 30102 (-132.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:03.488 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30095, posNoise = 7, negNoise = 4
17-03-17 21:43:03.488 -07 000000610 INF: Z Motor: After move to -0.133669, error = 0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:03.488 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 21:43:03.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:03.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:03.488 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:03.488 -07 000000458 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:03.488 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:03.488 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:03.488 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:03.488 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:03.488 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:43:03.488 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:03.488 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:03.488 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 21:43:03.488 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:03.488 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:03.508 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:43:03.508 -07 000000438 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:43:03.518 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 26 ms.
17-03-17 21:43:03.518 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:03.518 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:43:03.518 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:03.528 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:43:03.528 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms.
17-03-17 21:43:03.528 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 29377 150\n [Camera]
17-03-17 21:43:03.728 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:04.168 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:04.168 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:04.168 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:04.168 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:04.168 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:43:04.168 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:04.168 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:04.168 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:04.168 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:04.168 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:43:04.358 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29377 823
17-03-17 21:43:04.508 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:04.548 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:43:04.558 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:43:04.558 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:04.558 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:43:04.558 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:43:04.558 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:04.558 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:04.558 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:43:04.558 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:04.568 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:43:04.718 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:04.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:04.718 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:04.718 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:04.718 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:04.718 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:43:04.718 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:04.728 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:04.728 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:04.728 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:43:04.908 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:43:04.908 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:04.908 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 29377 150' command took 2 ms to send, 1378 ms to get response, and 1381 ms overall
17-03-17 21:43:04.918 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.134163
17-03-17 21:43:04.918 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13416 mm
17-03-17 21:43:04.918 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:04.918 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 21:43:04.918 -07 000000012 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-17 21:43:04.918 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:04.918 -07 000000438 INF: Z Motor: Entering MoveAbsStepped (DAC = 29308, sync = True, waitForSettling = False)
17-03-17 21:43:04.918 -07 000000438 INF: Z Motor: Moving to -0.134163 mm, started at -0.133660 mm, distance = -0.50 um
17-03-17 21:43:04.918 -07 000000424 INF: FPGA: Recv YRDPOS 122698
17-03-17 21:43:04.928 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:43:04.928 -07 000000012 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:04.928 -07 000000012 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:04.928 -07 000000012 INF: Y Motor: Moving 1330 steps2
17-03-17 21:43:04.928 -07 000000438 INF: FPGA: Xmit ZDACW 29308\n [Z Motor]
17-03-17 21:43:04.928 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:43:04.938 -07 000000438 INF: FPGA: 'ZDACW 29308' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 21:43:04.938 -07 000000438 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:04.938 -07 000000458 INF: FPGA: Recv ZDACR 29308
17-03-17 21:43:04.948 -07 000000438 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:04.948 -07 000000438 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 21:43:04.948 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:05.118 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 391 ms.
17-03-17 21:43:05.118 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:43:05.118 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:05.118 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 389 ms.
17-03-17 21:43:05.118 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:43:05.118 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:05.118 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:05.118 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 21:43:05.118 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:05.128 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 21:43:05.318 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-17 21:43:05.318 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:43:05.348 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:05.358 -07 000000476 INF: FPGA: Recv YRDPOS 124381
17-03-17 21:43:05.368 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:05.368 -07 000000012 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:05.368 -07 000000012 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 21:43:05.368 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.831 mm, average velocity = 2.089 mm/sec
17-03-17 21:43:06.318 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:06.318 -07 000000415 INF: FPGA: Recv YRDPOS 124381
17-03-17 21:43:06.328 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:06.328 -07 000000012 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:06.348 -07 000000012 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:06.348 -07 000000012 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:06.348 -07 000000012 INF: Y Motor: Moved to 60.7329 after 1431 ms (table move)
17-03-17 21:43:06.348 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134163 mm (DAC = 29308)
17-03-17 21:43:06.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.358 -07 000000458 INF: FPGA: Recv ZSGSRD 30170
17-03-17 21:43:06.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:06.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.358 -07 000000431 INF: FPGA: Recv ZSGSRD 30170
17-03-17 21:43:06.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.368 -07 000000480 INF: FPGA: Recv ZSGSRD 30178
17-03-17 21:43:06.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.378 -07 000000415 INF: FPGA: Recv ZSGSRD 30177
17-03-17 21:43:06.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.388 -07 000000512 INF: FPGA: Recv ZSGSRD 30178
17-03-17 21:43:06.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.398 -07 000000459 INF: FPGA: Recv ZSGSRD 30173
17-03-17 21:43:06.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.408 -07 000000501 INF: FPGA: Recv ZSGSRD 30170
17-03-17 21:43:06.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.418 -07 000000438 INF: FPGA: Recv ZSGSRD 30168
17-03-17 21:43:06.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.428 -07 000000576 INF: FPGA: Recv ZSGSRD 30171
17-03-17 21:43:06.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.438 -07 000000012 INF: FPGA: Recv ZSGSRD 30181
17-03-17 21:43:06.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.448 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:06.448 -07 000000475 INF: FPGA: Recv ZPIEZORD 25908
17-03-17 21:43:06.458 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.458 -07 000000610 INF: Z Motor: Piezo is near 35.3 V (nominally 0 to 100 V), expect near 44.7 V, since DAC is at 4.472 V. Piezo Error = -9.4 V.
17-03-17 21:43:06.458 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.2 um, Read 10 ADC samples: Avg = 30174 (-133.4 uncal um), Error = 0.8 uncal um, Median = 30172 (-133.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30168 (-133.3 uncal um), Max = 30181 (-133.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:43:06.458 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30174, posNoise = 7, negNoise = 6
17-03-17 21:43:06.458 -07 000000610 INF: Z Motor: After move to -0.134163, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:06.458 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 103 ms (allowed 150 ms), total time = 1536 ms
17-03-17 21:43:06.458 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:06.508 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms
17-03-17 21:43:06.508 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:06.508 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.13416752917663. ----------
17-03-17 21:43:06.508 -07 000000610 INF: Cycle	54	Tile	2	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:06.508 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29131, sync = True, waitForSettling = True)
17-03-17 21:43:06.508 -07 000000610 INF: Z Motor: Moving to -0.133353 mm, started at -0.134168 mm, distance = 0.81 um
17-03-17 21:43:06.508 -07 000000610 INF: FPGA: Xmit ZDACW 29131\n [Z Motor]
17-03-17 21:43:06.508 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:43:06.518 -07 000000610 INF: FPGA: 'ZDACW 29131' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:06.518 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:06.518 -07 000000424 INF: FPGA: Recv ZDACR 29131
17-03-17 21:43:06.528 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.528 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:06.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.678 -07 000000476 INF: FPGA: Recv ZSGSRD 30048
17-03-17 21:43:06.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:06.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.688 -07 000000608 INF: FPGA: Recv ZSGSRD 30055
17-03-17 21:43:06.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.698 -07 000000627 INF: FPGA: Recv ZSGSRD 30046
17-03-17 21:43:06.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.708 -07 000000501 INF: FPGA: Recv ZSGSRD 30049
17-03-17 21:43:06.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.718 -07 000000424 INF: FPGA: Recv ZSGSRD 30048
17-03-17 21:43:06.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.728 -07 000000382 INF: FPGA: Recv ZSGSRD 30045
17-03-17 21:43:06.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.738 -07 000000576 INF: FPGA: Recv ZSGSRD 30049
17-03-17 21:43:06.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.748 -07 000000475 INF: FPGA: Recv ZSGSRD 30045
17-03-17 21:43:06.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.758 -07 000000415 INF: FPGA: Recv ZSGSRD 30040
17-03-17 21:43:06.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:06.768 -07 000000012 INF: FPGA: Recv ZSGSRD 30048
17-03-17 21:43:06.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.778 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:06.778 -07 000000476 INF: FPGA: Recv ZPIEZORD 25714
17-03-17 21:43:06.788 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:06.788 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.445 V. Piezo Error = -9.5 V.
17-03-17 21:43:06.788 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.4 um, Read 10 ADC samples: Avg = 30047 (-132.6 uncal um), Error = 0.8 uncal um, Median = 30048 (-132.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30040 (-132.5 uncal um), Max = 30055 (-132.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:43:06.788 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30047, posNoise = 8, negNoise = 7
17-03-17 21:43:06.788 -07 000000610 INF: Z Motor: After move to -0.133353, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:06.788 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms)
17-03-17 21:43:06.788 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:06.788 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:06.788 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:06.788 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:06.788 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:06.788 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:06.788 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:06.788 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:06.788 -07 000000012 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:06.788 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:06.788 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:43:06.788 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:06.798 -07 000000012 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:06.798 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:06.798 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:06.798 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:06.798 -07 000000012 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:43:06.808 -07 000000012 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:43:06.808 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:43:06.808 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 21:43:06.808 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 29308 150\n [Camera]
17-03-17 21:43:06.908 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:06.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:07.008 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP turning red on 194
17-03-17 21:43:07.438 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:07.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:07.448 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:07.448 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:07.448 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:43:07.448 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:07.448 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:07.448 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:07.448 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:07.448 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:43:07.638 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29308 822
17-03-17 21:43:07.788 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:07.848 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 399 ms.
17-03-17 21:43:07.848 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 21:43:07.848 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:07.848 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 399 ms.
17-03-17 21:43:07.848 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:43:07.848 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:07.848 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:07.848 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 21:43:07.848 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:07.858 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-17 21:43:07.928 -07 000000415 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.985358,
17-03-17 21:43:07.998 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:07.998 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:07.998 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:07.998 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:07.998 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:43:07.998 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:07.998 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:07.998 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:07.998 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:07.998 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:43:08.188 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:08.188 -07 000000459 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:08.188 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 29308 150' command took 2 ms to send, 1374 ms to get response, and 1381 ms overall
17-03-17 21:43:08.188 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:43:08.188 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.73291015625, Z-Position -0.133351654234626. ------
17-03-17 21:43:08.198 -07 000000458 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:08.198 -07 000000569 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13976 mm
17-03-17 21:43:08.198 -07 000000569 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:08.198 -07 000000459 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:08.198 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 30531, sync = True, waitForSettling = False)
17-03-17 21:43:08.198 -07 000000382 INF: Z Motor: Moving to -0.139762 mm, started at -0.133352 mm, distance = -6.41 um
17-03-17 21:43:08.198 -07 000000476 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 21:43:08.198 -07 000000476 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-17 21:43:08.208 -07 000000458 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:08.208 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:08.208 -07 000000627 INF: FPGA: Recv YRDPOS 124381
17-03-17 21:43:08.218 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:43:08.218 -07 000000476 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:08.218 -07 000000476 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:08.218 -07 000000382 INF: FPGA: Xmit ZDACW 30531\n [Z Motor]
17-03-17 21:43:08.218 -07 000000476 INF: Y Motor: Moving 1344 steps-20
17-03-17 21:43:08.218 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:43:08.228 -07 000000382 INF: FPGA: 'ZDACW 30531' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 21:43:08.228 -07 000000458 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:43:08.238 -07 000000476 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:08.248 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:08.248 -07 000000415 INF: FPGA: Recv ZDACR 30531
17-03-17 21:43:08.258 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:43:08.258 -07 000000382 INF: Z Motor: MoveAbsStepped took 54 ms (did NOT wait for settling yet))
17-03-17 21:43:08.398 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 21:43:08.398 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 21:43:08.398 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:08.398 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 399 ms.
17-03-17 21:43:08.398 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:43:08.398 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:08.398 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:08.398 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 21:43:08.408 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:08.408 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-17 21:43:08.428 -07 000000608 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:43:08.428 -07 000000458 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 21:43:08.608 -07 000000459 INF: FPGA: Recv YMVTILE
17-03-17 21:43:08.608 -07 000000476 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:43:08.648 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:08.648 -07 000000576 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:43:08.658 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:08.658 -07 000000476 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:08.658 -07 000000476 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 21:43:08.658 -07 000000476 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.840 mm, average velocity = 2.115 mm/sec
17-03-17 21:43:09.608 -07 000000476 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:09.608 -07 000000475 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:43:09.618 -07 000000476 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:09.618 -07 000000476 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:09.638 -07 000000476 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:09.638 -07 000000476 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:09.638 -07 000000476 INF: Y Motor: Moved to 61.5640 after 1438 ms (table move)
17-03-17 21:43:09.638 -07 000000569 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139762 mm (DAC = 30531)
17-03-17 21:43:09.638 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.648 -07 000000424 INF: FPGA: Recv ZSGSRD 31055
17-03-17 21:43:09.648 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:09.648 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.648 -07 000000501 INF: FPGA: Recv ZSGSRD 31042
17-03-17 21:43:09.658 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.658 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.658 -07 000000512 INF: FPGA: Recv ZSGSRD 31042
17-03-17 21:43:09.668 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.668 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.668 -07 000000431 INF: FPGA: Recv ZSGSRD 31055
17-03-17 21:43:09.678 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.678 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.678 -07 000000458 INF: FPGA: Recv ZSGSRD 31054
17-03-17 21:43:09.688 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.688 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.688 -07 000000547 INF: FPGA: Recv ZSGSRD 31048
17-03-17 21:43:09.698 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.698 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.698 -07 000000382 INF: FPGA: Recv ZSGSRD 31057
17-03-17 21:43:09.708 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:43:09.708 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.708 -07 000000501 INF: FPGA: Recv ZSGSRD 31044
17-03-17 21:43:09.718 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.718 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.718 -07 000000576 INF: FPGA: Recv ZSGSRD 31039
17-03-17 21:43:09.728 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.728 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:09.728 -07 000000626 INF: FPGA: Recv ZSGSRD 31037
17-03-17 21:43:09.738 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.738 -07 000000569 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:09.738 -07 000000512 INF: FPGA: Recv ZPIEZORD 27062
17-03-17 21:43:09.748 -07 000000569 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:09.748 -07 000000569 INF: Z Motor: Piezo is near 37.8 V (nominally 0 to 100 V), expect near 46.6 V, since DAC is at 4.659 V. Piezo Error = -8.8 V.
17-03-17 21:43:09.748 -07 000000569 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.8 um, Read 10 ADC samples: Avg = 31047 (-139.0 uncal um), Error = 0.8 uncal um, Median = 31046 (-139.0 uncal um), StdDev = 7 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 31037 (-138.9 uncal um), Max = 31057 (-139.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:43:09.748 -07 000000569 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31047, posNoise = 10, negNoise = 10
17-03-17 21:43:09.748 -07 000000569 INF: Z Motor: After move to -0.139762, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:09.748 -07 000000569 INF: Z Motor: Settle wait time = 1441 ms, measure time = 103 ms (allowed 150 ms), total time = 1544 ms
17-03-17 21:43:09.748 -07 000000569 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:09.798 -07 000000569 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-17 21:43:09.798 -07 000000569 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:09.798 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:09.798 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:09.798 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:09.798 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:09.798 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:43:09.798 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:09.798 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:09.808 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:43:09.808 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:09.808 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:43:09.818 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 21:43:09.818 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 20 ms.
17-03-17 21:43:09.818 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:43:09.868 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:43:10.068 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:43:10.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:43:10.068 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:43:10.068 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) start.
17-03-17 21:43:10.108 -07 000000626 INF: FPGA: Recv @CAMSNAP 281
17-03-17 21:43:10.108 -07 000000608 INF: FPGA: Recv CAMSNAP
17-03-17 21:43:10.108 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 274 ms to get response, and 286 ms overall
17-03-17 21:43:10.198 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 601649056, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 21:43:10.198 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:10.198 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:43:10.198 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 21:43:10.208 -07 000000547 INF: Autofocus start
17-03-17 21:43:10.208 -07 000000547 INF: MeasureProfile start
17-03-17 21:43:10.208 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:10.208 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:10.218 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:43:10.218 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:43:10.218 -07 000000547 INF: MeasureProfile done
17-03-17 21:43:10.218 -07 000000547 INF: X=-16  Z correction [um]=-0.08128808
17-03-17 21:43:10.218 -07 000000547 INF: Autofocus finished
17-03-17 21:43:10.418 -07 000000429 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:43:10.418 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:43:10.418 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.139775866376387. ----------
17-03-17 21:43:10.418 -07 000000610 INF: Cycle	54	Tile	3	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:10.428 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29026, sync = True, waitForSettling = True)
17-03-17 21:43:10.428 -07 000000610 INF: Z Motor: Moving to -0.132873 mm, started at -0.139776 mm, distance = 6.90 um
17-03-17 21:43:10.428 -07 000000610 INF: FPGA: Xmit ZDACW 29026\n [Z Motor]
17-03-17 21:43:10.428 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 21:43:10.438 -07 000000610 INF: FPGA: 'ZDACW 29026' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.438 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:10.438 -07 000000626 INF: FPGA: Recv ZDACR 29026
17-03-17 21:43:10.448 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.448 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:10.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.598 -07 000000431 INF: FPGA: Recv ZSGSRD 29980
17-03-17 21:43:10.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.608 -07 000000012 INF: FPGA: Recv ZSGSRD 29972
17-03-17 21:43:10.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.618 -07 000000475 INF: FPGA: Recv ZSGSRD 29970
17-03-17 21:43:10.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.628 -07 000000501 INF: FPGA: Recv ZSGSRD 29975
17-03-17 21:43:10.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.638 -07 000000576 INF: FPGA: Recv ZSGSRD 29975
17-03-17 21:43:10.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.648 -07 000000424 INF: FPGA: Recv ZSGSRD 29971
17-03-17 21:43:10.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.658 -07 000000012 INF: FPGA: Recv ZSGSRD 29972
17-03-17 21:43:10.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.668 -07 000000512 INF: FPGA: Recv ZSGSRD 29977
17-03-17 21:43:10.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.678 -07 000000569 INF: FPGA: Recv ZSGSRD 29977
17-03-17 21:43:10.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:10.688 -07 000000438 INF: FPGA: Recv ZSGSRD 29972
17-03-17 21:43:10.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:10.698 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:10.698 -07 000000431 INF: FPGA: Recv ZPIEZORD 25694
17-03-17 21:43:10.708 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:10.708 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.429 V. Piezo Error = -9.4 V.
17-03-17 21:43:10.708 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.9 um, Read 10 ADC samples: Avg = 29974 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29974 (-132.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29970 (-132.1 uncal um), Max = 29980 (-132.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:10.708 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29974, posNoise = 6, negNoise = 4
17-03-17 21:43:10.708 -07 000000610 INF: Z Motor: After move to -0.132873, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:10.708 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-17 21:43:10.708 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:10.708 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:10.708 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:10.708 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:10.708 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:10.708 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:10.708 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:10.708 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:10.708 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:43:10.708 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:10.708 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:10.708 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:10.708 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:10.708 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:10.718 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:43:10.718 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:10.718 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:43:10.718 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:43:10.718 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:43:10.728 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:43:10.728 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 29202 150\n [Camera]
17-03-17 21:43:10.928 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:11.358 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:11.358 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:11.368 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:11.368 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:11.368 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 21:43:11.368 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:11.368 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:11.368 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:11.368 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:11.368 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 21:43:11.558 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29202 822
17-03-17 21:43:11.708 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:11.748 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:43:11.748 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:43:11.748 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:11.748 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 21:43:11.748 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 21:43:11.748 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:11.758 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:11.758 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:43:11.758 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:11.758 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:43:11.908 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:11.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:11.918 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:11.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:11.918 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:11.918 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:11.918 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 21:43:11.918 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:11.918 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:11.918 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:11.918 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:11.918 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 21:43:12.108 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1376
17-03-17 21:43:12.108 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:12.108 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 29202 150' command took 2 ms to send, 1375 ms to get response, and 1383 ms overall
17-03-17 21:43:12.108 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.133184
17-03-17 21:43:12.108 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13318 mm
17-03-17 21:43:12.108 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:12.118 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 21:43:12.118 -07 000000547 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-17 21:43:12.118 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:12.118 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 29094, sync = True, waitForSettling = False)
17-03-17 21:43:12.118 -07 000000576 INF: Z Motor: Moving to -0.133184 mm, started at -0.132883 mm, distance = -0.30 um
17-03-17 21:43:12.118 -07 000000501 INF: FPGA: Recv YRDPOS 126083
17-03-17 21:43:12.128 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:43:12.128 -07 000000547 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:12.128 -07 000000547 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:12.128 -07 000000547 INF: Y Motor: Moving 1342 steps-18
17-03-17 21:43:12.128 -07 000000576 INF: FPGA: Xmit ZDACW 29094\n [Z Motor]
17-03-17 21:43:12.128 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:43:12.138 -07 000000576 INF: FPGA: 'ZDACW 29094' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:43:12.138 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:12.138 -07 000000626 INF: FPGA: Recv ZDACR 29094
17-03-17 21:43:12.148 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:12.148 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:12.148 -07 000000576 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet))
17-03-17 21:43:12.298 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:43:12.298 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:43:12.298 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:12.298 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:12.298 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:43:12.298 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:43:12.298 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:12.308 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 21:43:12.308 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:43:12.308 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:43:12.518 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-17 21:43:12.518 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:43:12.558 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:12.558 -07 000000576 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:43:12.568 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:12.568 -07 000000547 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:12.568 -07 000000547 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:43:12.568 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.112 mm/sec
17-03-17 21:43:13.298 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.003063,
17-03-17 21:43:13.518 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:13.518 -07 000000458 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:43:13.528 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.528 -07 000000547 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:13.548 -07 000000547 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:13.548 -07 000000547 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:13.548 -07 000000547 INF: Y Motor: Moved to 62.3955 after 1431 ms (table move)
17-03-17 21:43:13.548 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133184 mm (DAC = 29094)
17-03-17 21:43:13.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.548 -07 000000569 INF: FPGA: Recv ZSGSRD 30014
17-03-17 21:43:13.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:13.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.558 -07 000000415 INF: FPGA: Recv ZSGSRD 30021
17-03-17 21:43:13.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.568 -07 000000459 INF: FPGA: Recv ZSGSRD 30021
17-03-17 21:43:13.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.578 -07 000000012 INF: FPGA: Recv ZSGSRD 30027
17-03-17 21:43:13.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.588 -07 000000424 INF: FPGA: Recv ZSGSRD 30026
17-03-17 21:43:13.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.598 -07 000000569 INF: FPGA: Recv ZSGSRD 30024
17-03-17 21:43:13.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.608 -07 000000501 INF: FPGA: Recv ZSGSRD 30026
17-03-17 21:43:13.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.628 -07 000000627 INF: FPGA: Recv ZSGSRD 30025
17-03-17 21:43:13.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:13.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.638 -07 000000480 INF: FPGA: Recv ZSGSRD 30023
17-03-17 21:43:13.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:13.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.658 -07 000000627 INF: FPGA: Recv ZSGSRD 30028
17-03-17 21:43:13.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:13.668 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:13.668 -07 000000480 INF: FPGA: Recv ZPIEZORD 25766
17-03-17 21:43:13.678 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.678 -07 000000610 INF: Z Motor: Piezo is near 35.0 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.439 V. Piezo Error = -9.4 V.
17-03-17 21:43:13.678 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30024 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30024 (-132.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30014 (-132.4 uncal um), Max = 30028 (-132.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:43:13.678 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30024, posNoise = 4, negNoise = 10
17-03-17 21:43:13.678 -07 000000610 INF: Z Motor: After move to -0.133184, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:13.678 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 125 ms (allowed 150 ms), total time = 1559 ms
17-03-17 21:43:13.678 -07 000000610 INF: Z Motor: Waiting extra 25 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:13.708 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-17 21:43:13.708 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:13.708 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.133203897355366. ----------
17-03-17 21:43:13.708 -07 000000610 INF: Cycle	54	Tile	4	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:13.708 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28917, sync = True, waitForSettling = True)
17-03-17 21:43:13.708 -07 000000610 INF: Z Motor: Moving to -0.132374 mm, started at -0.133204 mm, distance = 0.83 um
17-03-17 21:43:13.708 -07 000000610 INF: FPGA: Xmit ZDACW 28917\n [Z Motor]
17-03-17 21:43:13.708 -07 000000475 INF: FPGA: Recv ZDACW
17-03-17 21:43:13.718 -07 000000610 INF: FPGA: 'ZDACW 28917' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:13.718 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:13.718 -07 000000569 INF: FPGA: Recv ZDACR 28917
17-03-17 21:43:13.728 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.728 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:13.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.878 -07 000000012 INF: FPGA: Recv ZSGSRD 29897
17-03-17 21:43:13.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:13.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.888 -07 000000475 INF: FPGA: Recv ZSGSRD 29899
17-03-17 21:43:13.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.898 -07 000000512 INF: FPGA: Recv ZSGSRD 29897
17-03-17 21:43:13.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.908 -07 000000480 INF: FPGA: Recv ZSGSRD 29894
17-03-17 21:43:13.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.918 -07 000000382 INF: FPGA: Recv ZSGSRD 29894
17-03-17 21:43:13.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.928 -07 000000501 INF: FPGA: Recv ZSGSRD 29895
17-03-17 21:43:13.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.938 -07 000000576 INF: FPGA: Recv ZSGSRD 29892
17-03-17 21:43:13.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.948 -07 000000438 INF: FPGA: Recv ZSGSRD 29901
17-03-17 21:43:13.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.958 -07 000000547 INF: FPGA: Recv ZSGSRD 29893
17-03-17 21:43:13.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:13.968 -07 000000415 INF: FPGA: Recv ZSGSRD 29896
17-03-17 21:43:13.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.978 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:13.978 -07 000000626 INF: FPGA: Recv ZPIEZORD 25600
17-03-17 21:43:13.988 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:13.988 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.412 V. Piezo Error = -9.4 V.
17-03-17 21:43:13.988 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29896 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29896 (-131.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29892 (-131.6 uncal um), Max = 29901 (-131.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:13.988 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29896, posNoise = 5, negNoise = 4
17-03-17 21:43:13.988 -07 000000610 INF: Z Motor: After move to -0.132374, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:13.988 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:43:13.988 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:13.988 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:13.988 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:13.988 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:13.988 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:13.988 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:13.988 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:13.988 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:13.988 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:13.988 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:13.988 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:13.988 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:13.998 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:13.998 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:13.998 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 5 ms.
17-03-17 21:43:13.998 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:14.008 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 17 ms.
17-03-17 21:43:14.008 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:43:14.008 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:43:14.008 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 21:43:14.018 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 29094 150\n [Camera]
17-03-17 21:43:14.218 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:14.648 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:14.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:14.648 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:14.648 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:14.648 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 21:43:14.658 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:14.658 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:14.658 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:14.788 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:14.788 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:43:14.848 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29094 822
17-03-17 21:43:14.988 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:15.038 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 21:43:15.038 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:43:15.038 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:15.048 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:15.048 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 21:43:15.158 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 21:43:15.158 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 21:43:15.158 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:15.168 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:15.168 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 514 ms.
17-03-17 21:43:15.208 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:15.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:15.208 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:15.208 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:15.208 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:43:15.208 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:15.208 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:15.208 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:15.208 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:15.208 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 21:43:15.398 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:15.398 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:15.398 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 29094 150' command took 2 ms to send, 1372 ms to get response, and 1381 ms overall
17-03-17 21:43:15.398 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.133133
17-03-17 21:43:15.398 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13313 mm
17-03-17 21:43:15.398 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:15.398 -07 000000459 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 21:43:15.398 -07 000000459 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-17 21:43:15.398 -07 000000476 INF: Z Motor: Entering MoveAbsStepped (DAC = 29083, sync = True, waitForSettling = False)
17-03-17 21:43:15.398 -07 000000476 INF: Z Motor: Moving to -0.133133 mm, started at -0.132382 mm, distance = -0.75 um
17-03-17 21:43:15.398 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:15.408 -07 000000431 INF: FPGA: Recv YRDPOS 127786
17-03-17 21:43:15.408 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:15.408 -07 000000459 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:15.408 -07 000000459 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:15.408 -07 000000459 INF: Y Motor: Moving 1339 steps-15
17-03-17 21:43:15.408 -07 000000476 INF: FPGA: Xmit ZDACW 29083\n [Z Motor]
17-03-17 21:43:15.408 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:43:15.418 -07 000000476 INF: FPGA: 'ZDACW 29083' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:43:15.418 -07 000000476 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:15.418 -07 000000512 INF: FPGA: Recv ZDACR 29083
17-03-17 21:43:15.428 -07 000000459 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:15.428 -07 000000476 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:15.428 -07 000000476 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 21:43:15.588 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:43:15.588 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:43:15.588 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:15.588 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 387 ms.
17-03-17 21:43:15.588 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:43:15.588 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:15.598 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:15.598 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:15.598 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:43:15.598 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:43:15.798 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 21:43:15.798 -07 000000459 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:43:15.838 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:15.848 -07 000000458 INF: FPGA: Recv YRDPOS 129483
17-03-17 21:43:15.848 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:15.848 -07 000000459 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:15.848 -07 000000459 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:43:15.848 -07 000000459 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.837 mm, average velocity = 2.109 mm/sec
17-03-17 21:43:16.798 -07 000000459 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:16.798 -07 000000382 INF: FPGA: Recv YRDPOS 129483
17-03-17 21:43:16.808 -07 000000459 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:16.808 -07 000000459 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:16.828 -07 000000459 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:16.828 -07 000000459 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:16.828 -07 000000459 INF: Y Motor: Moved to 63.2241 after 1427 ms (table move)
17-03-17 21:43:16.828 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133133 mm (DAC = 29083)
17-03-17 21:43:16.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.838 -07 000000480 INF: FPGA: Recv ZSGSRD 30012
17-03-17 21:43:16.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:16.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.838 -07 000000429 INF: FPGA: Recv ZSGSRD 30012
17-03-17 21:43:16.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.848 -07 000000476 INF: FPGA: Recv ZSGSRD 30014
17-03-17 21:43:16.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.858 -07 000000626 INF: FPGA: Recv ZSGSRD 30017
17-03-17 21:43:16.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.868 -07 000000512 INF: FPGA: Recv ZSGSRD 30017
17-03-17 21:43:16.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.878 -07 000000547 INF: FPGA: Recv ZSGSRD 30017
17-03-17 21:43:16.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.888 -07 000000576 INF: FPGA: Recv ZSGSRD 30015
17-03-17 21:43:16.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.898 -07 000000475 INF: FPGA: Recv ZSGSRD 30016
17-03-17 21:43:16.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.908 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:16.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:16.908 -07 000000438 INF: FPGA: Recv ZSGSRD 30015
17-03-17 21:43:16.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:16.918 -07 000000475 INF: FPGA: Recv ZSGSRD 30009
17-03-17 21:43:16.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:16.928 -07 000000626 INF: FPGA: Recv ZPIEZORD 25778
17-03-17 21:43:16.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:16.938 -07 000000610 INF: Z Motor: Piezo is near 35.1 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.438 V. Piezo Error = -9.3 V.
17-03-17 21:43:16.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30014 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30015 (-132.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30009 (-132.3 uncal um), Max = 30017 (-132.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:43:16.938 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30014, posNoise = 3, negNoise = 5
17-03-17 21:43:16.938 -07 000000610 INF: Z Motor: After move to -0.133133, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:16.938 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 104 ms (allowed 150 ms), total time = 1533 ms
17-03-17 21:43:16.938 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:16.988 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:43:16.988 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:16.988 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.133139655233948. ----------
17-03-17 21:43:16.988 -07 000000610 INF: Cycle	54	Tile	5	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:16.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28906, sync = True, waitForSettling = True)
17-03-17 21:43:16.988 -07 000000610 INF: Z Motor: Moving to -0.132323 mm, started at -0.133140 mm, distance = 0.82 um
17-03-17 21:43:16.988 -07 000000610 INF: FPGA: Xmit ZDACW 28906\n [Z Motor]
17-03-17 21:43:16.988 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:43:16.998 -07 000000610 INF: FPGA: 'ZDACW 28906' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:16.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:16.998 -07 000000475 INF: FPGA: Recv ZDACR 28906
17-03-17 21:43:17.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:17.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.158 -07 000000480 INF: FPGA: Recv ZSGSRD 29883
17-03-17 21:43:17.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:17.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.168 -07 000000576 INF: FPGA: Recv ZSGSRD 29892
17-03-17 21:43:17.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.178 -07 000000608 INF: FPGA: Recv ZSGSRD 29894
17-03-17 21:43:17.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.188 -07 000000626 INF: FPGA: Recv ZSGSRD 29891
17-03-17 21:43:17.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.198 -07 000000458 INF: FPGA: Recv ZSGSRD 29891
17-03-17 21:43:17.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.208 -07 000000547 INF: FPGA: Recv ZSGSRD 29886
17-03-17 21:43:17.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.218 -07 000000431 INF: FPGA: Recv ZSGSRD 29892
17-03-17 21:43:17.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.228 -07 000000382 INF: FPGA: Recv ZSGSRD 29881
17-03-17 21:43:17.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.238 -07 000000627 INF: FPGA: Recv ZSGSRD 29886
17-03-17 21:43:17.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:17.248 -07 000000459 INF: FPGA: Recv ZSGSRD 29887
17-03-17 21:43:17.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:17.258 -07 000000012 INF: FPGA: Recv ZPIEZORD 25605
17-03-17 21:43:17.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:17.268 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.411 V. Piezo Error = -9.4 V.
17-03-17 21:43:17.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29888 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29889 (-131.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29881 (-131.5 uncal um), Max = 29894 (-131.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:43:17.268 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29888, posNoise = 6, negNoise = 7
17-03-17 21:43:17.268 -07 000000610 INF: Z Motor: After move to -0.132323, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:17.268 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:43:17.268 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:17.268 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:17.268 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:17.268 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:17.268 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:17.268 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:17.268 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:17.268 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:17.268 -07 000000459 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:17.268 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:17.268 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:17.268 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:17.278 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:17.278 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:17.278 -07 000000459 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:17.278 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:17.288 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:43:17.288 -07 000000458 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:43:17.288 -07 000000459 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:43:17.288 -07 000000459 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:43:17.288 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 29083 150\n [Camera]
17-03-17 21:43:17.488 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:17.928 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:17.928 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:17.928 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:17.928 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:17.928 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-17 21:43:17.928 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:17.928 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:17.928 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:18.048 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:18.048 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:43:18.118 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29083 822
17-03-17 21:43:18.268 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:18.318 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:43:18.318 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:43:18.318 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:18.318 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:18.318 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:43:18.418 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 21:43:18.418 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 21:43:18.418 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:18.428 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:18.428 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 499 ms.
17-03-17 21:43:18.478 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:18.478 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:18.478 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:18.488 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:18.488 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:18.488 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:18.488 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:18.488 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 21:43:18.498 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:18.498 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 21:43:18.668 -07 000000459 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.988112,
17-03-17 21:43:18.668 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:43:18.678 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:18.678 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 29083 150' command took 2 ms to send, 1370 ms to get response, and 1381 ms overall
17-03-17 21:43:18.678 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132732
17-03-17 21:43:18.678 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13273 mm
17-03-17 21:43:18.678 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:18.678 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 21:43:18.678 -07 000000429 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-17 21:43:18.678 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 28995, sync = True, waitForSettling = False)
17-03-17 21:43:18.678 -07 000000569 INF: Z Motor: Moving to -0.132731 mm, started at -0.132330 mm, distance = -0.40 um
17-03-17 21:43:18.688 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:18.688 -07 000000382 INF: FPGA: Recv YRDPOS 129484
17-03-17 21:43:18.698 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:43:18.698 -07 000000429 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:18.698 -07 000000429 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:18.698 -07 000000429 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:43:18.708 -07 000000569 INF: FPGA: Xmit ZDACW 28995\n [Z Motor]
17-03-17 21:43:18.708 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:43:18.718 -07 000000569 INF: FPGA: 'ZDACW 28995' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-17 21:43:18.718 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:18.748 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:18.748 -07 000000459 INF: FPGA: Recv ZDACR 28995
17-03-17 21:43:18.758 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall
17-03-17 21:43:18.758 -07 000000569 INF: Z Motor: MoveAbsStepped took 71 ms (did NOT wait for settling yet))
17-03-17 21:43:18.868 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 21:43:18.868 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:43:18.868 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:18.868 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:43:18.868 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:43:18.878 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:18.878 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:18.878 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 21:43:18.878 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:18.888 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 21:43:19.088 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 21:43:19.088 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-17 21:43:19.128 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:19.138 -07 000000012 INF: FPGA: Recv YRDPOS 131188
17-03-17 21:43:19.138 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:43:19.138 -07 000000429 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:19.138 -07 000000429 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-17 21:43:19.138 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.838 mm, average velocity = 2.128 mm/sec
17-03-17 21:43:20.088 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:20.088 -07 000000501 INF: FPGA: Recv YRDPOS 131189
17-03-17 21:43:20.098 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:20.098 -07 000000429 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:20.118 -07 000000429 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:20.118 -07 000000429 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:43:20.118 -07 000000429 INF: Y Motor: Moved to 64.0571 after 1436 ms (table move)
17-03-17 21:43:20.118 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132731 mm (DAC = 28995)
17-03-17 21:43:20.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.118 -07 000000608 INF: FPGA: Recv ZSGSRD 29952
17-03-17 21:43:20.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:43:20.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.128 -07 000000459 INF: FPGA: Recv ZSGSRD 29952
17-03-17 21:43:20.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.138 -07 000000458 INF: FPGA: Recv ZSGSRD 29952
17-03-17 21:43:20.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.148 -07 000000512 INF: FPGA: Recv ZSGSRD 29953
17-03-17 21:43:20.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.158 -07 000000476 INF: FPGA: Recv ZSGSRD 29953
17-03-17 21:43:20.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.168 -07 000000576 INF: FPGA: Recv ZSGSRD 29959
17-03-17 21:43:20.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.178 -07 000000569 INF: FPGA: Recv ZSGSRD 29950
17-03-17 21:43:20.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.188 -07 000000547 INF: FPGA: Recv ZSGSRD 29942
17-03-17 21:43:20.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.198 -07 000000501 INF: FPGA: Recv ZSGSRD 29950
17-03-17 21:43:20.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.208 -07 000000429 INF: FPGA: Recv ZSGSRD 29954
17-03-17 21:43:20.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.218 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:20.218 -07 000000415 INF: FPGA: Recv ZPIEZORD 25702
17-03-17 21:43:20.228 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.228 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.424 V. Piezo Error = -9.3 V.
17-03-17 21:43:20.228 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29952 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29952 (-132.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29942 (-131.9 uncal um), Max = 29959 (-132.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:43:20.228 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29952, posNoise = 7, negNoise = 10
17-03-17 21:43:20.228 -07 000000610 INF: Z Motor: After move to -0.132731, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:20.228 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 106 ms (allowed 150 ms), total time = 1541 ms
17-03-17 21:43:20.228 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:20.278 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-17 21:43:20.278 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:20.278 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.132741354081159. ----------
17-03-17 21:43:20.278 -07 000000610 INF: Cycle	54	Tile	6	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:20.278 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28819, sync = True, waitForSettling = True)
17-03-17 21:43:20.278 -07 000000610 INF: Z Motor: Moving to -0.131925 mm, started at -0.132741 mm, distance = 0.82 um
17-03-17 21:43:20.278 -07 000000610 INF: FPGA: Xmit ZDACW 28819\n [Z Motor]
17-03-17 21:43:20.278 -07 000000012 INF: FPGA: Recv ZDACW
17-03-17 21:43:20.288 -07 000000610 INF: FPGA: 'ZDACW 28819' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:20.288 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:20.288 -07 000000547 INF: FPGA: Recv ZDACR 28819
17-03-17 21:43:20.298 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.298 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:20.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.448 -07 000000512 INF: FPGA: Recv ZSGSRD 29832
17-03-17 21:43:20.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:20.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.458 -07 000000429 INF: FPGA: Recv ZSGSRD 29829
17-03-17 21:43:20.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.468 -07 000000608 INF: FPGA: Recv ZSGSRD 29826
17-03-17 21:43:20.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.478 -07 000000501 INF: FPGA: Recv ZSGSRD 29826
17-03-17 21:43:20.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.488 -07 000000480 INF: FPGA: Recv ZSGSRD 29821
17-03-17 21:43:20.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.498 -07 000000626 INF: FPGA: Recv ZSGSRD 29827
17-03-17 21:43:20.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.508 -07 000000431 INF: FPGA: Recv ZSGSRD 29820
17-03-17 21:43:20.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.518 -07 000000438 INF: FPGA: Recv ZSGSRD 29824
17-03-17 21:43:20.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.528 -07 000000627 INF: FPGA: Recv ZSGSRD 29830
17-03-17 21:43:20.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:20.538 -07 000000382 INF: FPGA: Recv ZSGSRD 29825
17-03-17 21:43:20.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.548 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:20.548 -07 000000475 INF: FPGA: Recv ZPIEZORD 25535
17-03-17 21:43:20.558 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:20.558 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.397 V. Piezo Error = -9.4 V.
17-03-17 21:43:20.558 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29826 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29826 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29820 (-131.1 uncal um), Max = 29832 (-131.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:43:20.558 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29826, posNoise = 6, negNoise = 6
17-03-17 21:43:20.558 -07 000000610 INF: Z Motor: After move to -0.131925, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:20.558 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 21:43:20.558 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:20.558 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:20.558 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:20.558 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:20.558 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:20.558 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:20.558 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:20.558 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:20.558 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:20.558 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:20.558 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:20.558 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:20.568 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:20.568 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:20.568 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:20.568 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:20.578 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:43:20.578 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:43:20.578 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:43:20.578 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:43:20.578 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28995 150\n [Camera]
17-03-17 21:43:20.778 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:21.218 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:21.218 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:21.218 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:21.218 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:21.218 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:43:21.218 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:21.218 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:21.218 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:21.218 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:21.218 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:43:21.408 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28995 822
17-03-17 21:43:21.558 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:21.598 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:43:21.598 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:43:21.598 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:21.598 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:43:21.598 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:43:21.598 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:21.598 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:21.598 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:43:21.608 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:21.618 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 21:43:21.768 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:21.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:21.768 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:21.768 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:21.768 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:43:21.768 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:21.768 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:21.768 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:21.768 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:21.768 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 21:43:21.908 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:21.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:21.958 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:21.958 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:21.958 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28995 150' command took 2 ms to send, 1375 ms to get response, and 1381 ms overall
17-03-17 21:43:21.958 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:43:21.958 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.05712890625, Z-Position -0.131931903351297. ------
17-03-17 21:43:21.968 -07 000000438 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13845 mm
17-03-17 21:43:21.968 -07 000000438 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:21.968 -07 000000012 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:21.968 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 21:43:21.968 -07 000000501 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-17 21:43:21.968 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:21.968 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 30245, sync = True, waitForSettling = False)
17-03-17 21:43:21.968 -07 000000429 INF: Z Motor: Moving to -0.138453 mm, started at -0.131932 mm, distance = -6.52 um
17-03-17 21:43:21.978 -07 000000012 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:43:21.978 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:21.978 -07 000000626 INF: FPGA: Recv YRDPOS 131189
17-03-17 21:43:21.988 -07 000000429 INF: FPGA: Xmit ZDACW 30245\n [Z Motor]
17-03-17 21:43:21.988 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:43:21.988 -07 000000501 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:21.988 -07 000000501 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:21.988 -07 000000501 INF: Y Motor: Moving 1337 steps-12
17-03-17 21:43:21.988 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:43:21.998 -07 000000012 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:43:21.998 -07 000000429 INF: FPGA: 'ZDACW 30245' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 21:43:22.008 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:22.018 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:22.018 -07 000000569 INF: FPGA: Recv ZDACR 30245
17-03-17 21:43:22.028 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:43:22.028 -07 000000429 INF: Z Motor: MoveAbsStepped took 54 ms (did NOT wait for settling yet))
17-03-17 21:43:22.148 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:43:22.148 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:43:22.148 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:22.148 -07 000000476 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:43:22.148 -07 000000476 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:43:22.148 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:22.158 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:22.158 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 21:43:22.158 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:22.158 -07 000000476 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:43:22.198 -07 000000627 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:43:22.198 -07 000000012 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 21:43:22.388 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:43:22.388 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 400 ms overall
17-03-17 21:43:22.418 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:22.428 -07 000000576 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:43:22.428 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:43:22.428 -07 000000501 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:22.428 -07 000000501 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:43:22.428 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.835 mm, average velocity = 2.083 mm/sec
17-03-17 21:43:23.378 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:23.378 -07 000000012 INF: FPGA: Recv YRDPOS 132872
17-03-17 21:43:23.388 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:23.388 -07 000000501 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:23.408 -07 000000501 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:23.408 -07 000000501 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:23.408 -07 000000501 INF: Y Motor: Moved to 64.8789 after 1439 ms (table move)
17-03-17 21:43:23.408 -07 000000438 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138453 mm (DAC = 30245)
17-03-17 21:43:23.408 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.418 -07 000000512 INF: FPGA: Recv ZSGSRD 30839
17-03-17 21:43:23.418 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:43:23.418 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.418 -07 000000480 INF: FPGA: Recv ZSGSRD 30849
17-03-17 21:43:23.428 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:43:23.428 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.428 -07 000000608 INF: FPGA: Recv ZSGSRD 30832
17-03-17 21:43:23.438 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.438 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.438 -07 000000459 INF: FPGA: Recv ZSGSRD 30837
17-03-17 21:43:23.448 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.448 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.448 -07 000000501 INF: FPGA: Recv ZSGSRD 30839
17-03-17 21:43:23.458 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.458 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.458 -07 000000512 INF: FPGA: Recv ZSGSRD 30843
17-03-17 21:43:23.468 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.468 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.468 -07 000000627 INF: FPGA: Recv ZSGSRD 30851
17-03-17 21:43:23.478 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.478 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.478 -07 000000012 INF: FPGA: Recv ZSGSRD 30841
17-03-17 21:43:23.488 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.488 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.488 -07 000000626 INF: FPGA: Recv ZSGSRD 30847
17-03-17 21:43:23.498 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.498 -07 000000438 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:23.498 -07 000000501 INF: FPGA: Recv ZSGSRD 30839
17-03-17 21:43:23.508 -07 000000438 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.508 -07 000000438 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:23.508 -07 000000415 INF: FPGA: Recv ZPIEZORD 26870
17-03-17 21:43:23.518 -07 000000438 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:23.518 -07 000000438 INF: Z Motor: Piezo is near 37.4 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.615 V. Piezo Error = -8.7 V.
17-03-17 21:43:23.518 -07 000000438 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.5 um, Read 10 ADC samples: Avg = 30842 (-137.7 uncal um), Error = 0.8 uncal um, Median = 30840 (-137.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 19 (0.1 uncal um), Min = 30832 (-137.6 uncal um), Max = 30851 (-137.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 21:43:23.518 -07 000000438 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30842, posNoise = 9, negNoise = 10
17-03-17 21:43:23.518 -07 000000438 INF: Z Motor: After move to -0.138453, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:23.518 -07 000000438 INF: Z Motor: Settle wait time = 1441 ms, measure time = 103 ms (allowed 150 ms), total time = 1544 ms
17-03-17 21:43:23.518 -07 000000438 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:23.568 -07 000000438 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-17 21:43:23.568 -07 000000438 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:23.568 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:23.568 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:23.568 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:23.568 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:23.568 -07 000000382 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:43:23.568 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:23.568 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 21:43:23.568 -07 000000382 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:43:23.578 -07 000000382 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:23.578 -07 000000382 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:43:23.588 -07 000000382 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:43:23.588 -07 000000382 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 21:43:23.588 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:43:23.638 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:43:23.838 -07 000000012 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:43:23.838 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:43:23.838 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:43:23.838 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 21:43:23.878 -07 000000608 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:43:23.878 -07 000000459 INF: FPGA: Recv CAMSNAP
17-03-17 21:43:23.878 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 285 ms overall
17-03-17 21:43:23.968 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 21:43:23.968 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:23.968 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:43:23.968 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:43:23.978 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:23.978 -07 000000627 INF: Autofocus start
17-03-17 21:43:23.978 -07 000000627 INF: MeasureProfile start
17-03-17 21:43:23.978 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:23.988 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:43:23.988 -07 000000576 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:43:23.988 -07 000000627 INF: MeasureProfile done
17-03-17 21:43:23.988 -07 000000627 INF: X=53  Z correction [um]=0.2310023
17-03-17 21:43:23.988 -07 000000627 INF: Autofocus finished
17-03-17 21:43:24.058 -07 000000458 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.974486,
17-03-17 21:43:24.188 -07 000000627 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:43:24.188 -07 000000576 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:43:24.188 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.138458902887326. ----------
17-03-17 21:43:24.188 -07 000000610 INF: Cycle	54	Tile	7	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:24.198 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28808, sync = True, waitForSettling = True)
17-03-17 21:43:24.198 -07 000000610 INF: Z Motor: Moving to -0.131875 mm, started at -0.138459 mm, distance = 6.58 um
17-03-17 21:43:24.198 -07 000000610 INF: FPGA: Xmit ZDACW 28808\n [Z Motor]
17-03-17 21:43:24.198 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:43:24.208 -07 000000610 INF: FPGA: 'ZDACW 28808' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:43:24.208 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:24.208 -07 000000476 INF: FPGA: Recv ZDACR 28808
17-03-17 21:43:24.218 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.218 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:24.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.368 -07 000000547 INF: FPGA: Recv ZSGSRD 29819
17-03-17 21:43:24.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:24.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.378 -07 000000424 INF: FPGA: Recv ZSGSRD 29819
17-03-17 21:43:24.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.388 -07 000000431 INF: FPGA: Recv ZSGSRD 29814
17-03-17 21:43:24.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.398 -07 000000415 INF: FPGA: Recv ZSGSRD 29821
17-03-17 21:43:24.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.428 -07 000000415 INF: FPGA: Recv ZSGSRD 29820
17-03-17 21:43:24.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:43:24.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.458 -07 000000438 INF: FPGA: Recv ZSGSRD 29817
17-03-17 21:43:24.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:43:24.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.468 -07 000000547 INF: FPGA: Recv ZSGSRD 29821
17-03-17 21:43:24.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.488 -07 000000415 INF: FPGA: Recv ZSGSRD 29815
17-03-17 21:43:24.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:24.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.498 -07 000000512 INF: FPGA: Recv ZSGSRD 29818
17-03-17 21:43:24.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:24.508 -07 000000382 INF: FPGA: Recv ZSGSRD 29816
17-03-17 21:43:24.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:24.518 -07 000000547 INF: FPGA: Recv ZPIEZORD 25551
17-03-17 21:43:24.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:24.528 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -9.4 V.
17-03-17 21:43:24.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29818 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29818 (-131.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29814 (-131.1 uncal um), Max = 29821 (-131.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:24.528 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29818, posNoise = 3, negNoise = 4
17-03-17 21:43:24.528 -07 000000610 INF: Z Motor: After move to -0.131875, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:24.528 -07 000000610 INF: Z Motor: MoveAbsStepped took 329 ms)
17-03-17 21:43:24.528 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:24.528 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:24.528 -07 000000438 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:24.528 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:24.528 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:24.528 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:24.528 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:24.528 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:24.528 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:24.528 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:24.528 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:24.528 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:24.538 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:43:24.538 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:24.538 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:24.538 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:24.548 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:43:24.548 -07 000000382 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:43:24.548 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:43:24.548 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:43:24.558 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28985 150\n [Camera]
17-03-17 21:43:24.748 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:25.188 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:25.188 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:25.188 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:25.188 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:25.188 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:43:25.198 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:25.198 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:25.198 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:25.198 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:25.198 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 21:43:25.378 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28985 822
17-03-17 21:43:25.658 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 464 ms.
17-03-17 21:43:25.658 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 464 ms.
17-03-17 21:43:25.658 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:25.658 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:25.658 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 461 ms.
17-03-17 21:43:25.658 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 463 ms.
17-03-17 21:43:25.658 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:25.668 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:43:25.668 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 471 ms.
17-03-17 21:43:25.668 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:25.668 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 476 ms.
17-03-17 21:43:25.738 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:25.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:25.748 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:25.748 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:25.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:25.748 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:25.748 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:25.748 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:25.748 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:25.748 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:43:25.938 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:25.938 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:25.938 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28985 150' command took 2 ms to send, 1371 ms to get response, and 1381 ms overall
17-03-17 21:43:25.938 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.132622
17-03-17 21:43:25.938 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13262 mm
17-03-17 21:43:25.938 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:25.938 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 21:43:25.938 -07 000000547 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-17 21:43:25.938 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:25.938 -07 000000382 INF: Z Motor: Entering MoveAbsStepped (DAC = 28971, sync = True, waitForSettling = False)
17-03-17 21:43:25.938 -07 000000382 INF: Z Motor: Moving to -0.132621 mm, started at -0.131881 mm, distance = -0.74 um
17-03-17 21:43:25.938 -07 000000431 INF: FPGA: Recv YRDPOS 132873
17-03-17 21:43:25.948 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:25.948 -07 000000382 INF: FPGA: Xmit ZDACW 28971\n [Z Motor]
17-03-17 21:43:25.948 -07 000000547 INF: Y Motor: Encoder = 132873 = motor step 103807.0 = 64.8794 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:25.948 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:43:25.958 -07 000000382 INF: FPGA: 'ZDACW 28971' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-17 21:43:25.958 -07 000000382 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:25.958 -07 000000547 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:25.958 -07 000000547 INF: Y Motor: Moving 1349 steps-28
17-03-17 21:43:25.958 -07 000000627 INF: FPGA: Recv ZDACR 28971
17-03-17 21:43:25.968 -07 000000382 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:25.968 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:25.968 -07 000000382 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 21:43:26.138 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 21:43:26.138 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:43:26.138 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:26.138 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:26.138 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 21:43:26.148 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 396 ms.
17-03-17 21:43:26.148 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 21:43:26.148 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:26.148 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:26.158 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-17 21:43:26.338 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 21:43:26.338 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:43:26.378 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:26.388 -07 000000458 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:43:26.388 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:43:26.388 -07 000000547 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:26.388 -07 000000547 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-17 21:43:26.388 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.180 mm/sec
17-03-17 21:43:26.908 -07 000000438 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:26.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:27.338 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:27.338 -07 000000626 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:43:27.348 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.348 -07 000000547 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:27.368 -07 000000547 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:27.368 -07 000000547 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:27.368 -07 000000547 INF: Y Motor: Moved to 65.7144 after 1430 ms (table move)
17-03-17 21:43:27.368 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132621 mm (DAC = 28971)
17-03-17 21:43:27.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.378 -07 000000438 INF: FPGA: Recv ZSGSRD 29934
17-03-17 21:43:27.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 21:43:27.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.378 -07 000000608 INF: FPGA: Recv ZSGSRD 29934
17-03-17 21:43:27.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:43:27.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.388 -07 000000480 INF: FPGA: Recv ZSGSRD 29934
17-03-17 21:43:27.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.398 -07 000000415 INF: FPGA: Recv ZSGSRD 29937
17-03-17 21:43:27.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.408 -07 000000424 INF: FPGA: Recv ZSGSRD 29939
17-03-17 21:43:27.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.418 -07 000000627 INF: FPGA: Recv ZSGSRD 29941
17-03-17 21:43:27.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.428 -07 000000547 INF: FPGA: Recv ZSGSRD 29929
17-03-17 21:43:27.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.438 -07 000000475 INF: FPGA: Recv ZSGSRD 29928
17-03-17 21:43:27.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.448 -07 000000569 INF: FPGA: Recv ZSGSRD 29934
17-03-17 21:43:27.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.458 -07 000000576 INF: FPGA: Recv ZSGSRD 29932
17-03-17 21:43:27.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.468 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:27.468 -07 000000429 INF: FPGA: Recv ZPIEZORD 25724
17-03-17 21:43:27.478 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.478 -07 000000610 INF: Z Motor: Piezo is near 35.0 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.421 V. Piezo Error = -9.3 V.
17-03-17 21:43:27.478 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29934 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29934 (-131.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29928 (-131.8 uncal um), Max = 29941 (-131.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:43:27.478 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29934, posNoise = 7, negNoise = 6
17-03-17 21:43:27.478 -07 000000610 INF: Z Motor: After move to -0.132621, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:27.478 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 101 ms (allowed 150 ms), total time = 1533 ms
17-03-17 21:43:27.478 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:27.528 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:43:27.528 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:27.528 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.132625718262607. ----------
17-03-17 21:43:27.528 -07 000000610 INF: Cycle	54	Tile	8	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:27.528 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28795, sync = True, waitForSettling = True)
17-03-17 21:43:27.528 -07 000000610 INF: Z Motor: Moving to -0.131815 mm, started at -0.132626 mm, distance = 0.81 um
17-03-17 21:43:27.528 -07 000000610 INF: FPGA: Xmit ZDACW 28795\n [Z Motor]
17-03-17 21:43:27.528 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 21:43:27.538 -07 000000610 INF: FPGA: 'ZDACW 28795' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:27.538 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:27.538 -07 000000480 INF: FPGA: Recv ZDACR 28795
17-03-17 21:43:27.548 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.548 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:27.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.698 -07 000000012 INF: FPGA: Recv ZSGSRD 29812
17-03-17 21:43:27.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:27.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.708 -07 000000431 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:43:27.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.718 -07 000000476 INF: FPGA: Recv ZSGSRD 29811
17-03-17 21:43:27.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.728 -07 000000547 INF: FPGA: Recv ZSGSRD 29812
17-03-17 21:43:27.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.738 -07 000000480 INF: FPGA: Recv ZSGSRD 29806
17-03-17 21:43:27.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.748 -07 000000501 INF: FPGA: Recv ZSGSRD 29806
17-03-17 21:43:27.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.758 -07 000000512 INF: FPGA: Recv ZSGSRD 29804
17-03-17 21:43:27.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.768 -07 000000476 INF: FPGA: Recv ZSGSRD 29808
17-03-17 21:43:27.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.778 -07 000000627 INF: FPGA: Recv ZSGSRD 29809
17-03-17 21:43:27.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:27.788 -07 000000480 INF: FPGA: Recv ZSGSRD 29807
17-03-17 21:43:27.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.798 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:27.798 -07 000000501 INF: FPGA: Recv ZPIEZORD 25572
17-03-17 21:43:27.808 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:27.808 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.394 V. Piezo Error = -9.3 V.
17-03-17 21:43:27.808 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29808 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29808 (-131.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29804 (-131.0 uncal um), Max = 29812 (-131.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:27.808 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29808, posNoise = 4, negNoise = 4
17-03-17 21:43:27.808 -07 000000610 INF: Z Motor: After move to -0.131815, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:27.808 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:43:27.808 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:27.808 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:27.808 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:27.808 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:27.808 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:27.808 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:27.808 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:27.808 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:27.808 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:27.808 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:27.808 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:27.808 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:27.818 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:27.818 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:27.818 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:27.818 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:27.828 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 21:43:27.828 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:43:27.828 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:43:27.828 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:43:27.828 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28971 150\n [Camera]
17-03-17 21:43:28.028 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:28.468 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 633
17-03-17 21:43:28.468 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 633
17-03-17 21:43:28.468 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:28.468 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:28.468 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:43:28.468 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 633
17-03-17 21:43:28.468 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 633
17-03-17 21:43:28.468 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:28.468 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:28.468 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:43:28.658 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28971 822
17-03-17 21:43:28.808 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:28.848 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:43:28.848 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:43:28.848 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:28.848 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:43:28.848 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:43:28.848 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:28.858 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:28.858 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:43:28.858 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:28.858 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 21:43:29.018 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:29.018 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:29.018 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:29.018 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:29.018 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:43:29.018 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:29.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:29.018 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:29.138 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:29.138 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:43:29.208 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:29.208 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:29.208 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28971 150' command took 2 ms to send, 1375 ms to get response, and 1382 ms overall
17-03-17 21:43:29.208 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.132138
17-03-17 21:43:29.208 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13214 mm
17-03-17 21:43:29.208 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:29.218 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 21:43:29.218 -07 000000480 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-17 21:43:29.218 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:29.218 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 28865, sync = True, waitForSettling = False)
17-03-17 21:43:29.218 -07 000000608 INF: Z Motor: Moving to -0.132136 mm, started at -0.131816 mm, distance = -0.32 um
17-03-17 21:43:29.218 -07 000000429 INF: FPGA: Recv YRDPOS 134583
17-03-17 21:43:29.228 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:43:29.228 -07 000000480 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:29.228 -07 000000480 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:29.228 -07 000000480 INF: Y Motor: Moving 1341 steps-17
17-03-17 21:43:29.228 -07 000000608 INF: FPGA: Xmit ZDACW 28865\n [Z Motor]
17-03-17 21:43:29.228 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:43:29.238 -07 000000608 INF: FPGA: 'ZDACW 28865' command took 1 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 21:43:29.238 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:29.248 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:29.248 -07 000000547 INF: FPGA: Recv ZDACR 28865
17-03-17 21:43:29.258 -07 000000608 INF: FPGA: 'ZDACR' command took 2 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:29.258 -07 000000608 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-17 21:43:29.418 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 21:43:29.418 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:43:29.418 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:29.418 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:43:29.418 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 21:43:29.458 -07 000000431 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.978563,
17-03-17 21:43:29.528 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 21:43:29.528 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:43:29.528 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:29.528 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:43:29.538 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-17 21:43:29.608 -07 000000458 INF: FPGA: Recv YMVTILE
17-03-17 21:43:29.608 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:43:29.648 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:29.648 -07 000000547 INF: FPGA: Recv YRDPOS 136272
17-03-17 21:43:29.658 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:29.658 -07 000000480 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:29.658 -07 000000480 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:43:29.658 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.838 mm, average velocity = 2.166 mm/sec
17-03-17 21:43:30.608 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:30.608 -07 000000438 INF: FPGA: Recv YRDPOS 136272
17-03-17 21:43:30.618 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:30.618 -07 000000480 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:30.638 -07 000000480 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:30.638 -07 000000480 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:30.638 -07 000000480 INF: Y Motor: Moved to 66.5391 after 1422 ms (table move)
17-03-17 21:43:30.638 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132136 mm (DAC = 28865)
17-03-17 21:43:30.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.648 -07 000000627 INF: FPGA: Recv ZSGSRD 29858
17-03-17 21:43:30.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:30.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.648 -07 000000576 INF: FPGA: Recv ZSGSRD 29854
17-03-17 21:43:30.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.658 -07 000000608 INF: FPGA: Recv ZSGSRD 29858
17-03-17 21:43:30.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.668 -07 000000415 INF: FPGA: Recv ZSGSRD 29866
17-03-17 21:43:30.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.678 -07 000000480 INF: FPGA: Recv ZSGSRD 29861
17-03-17 21:43:30.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.688 -07 000000547 INF: FPGA: Recv ZSGSRD 29859
17-03-17 21:43:30.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.698 -07 000000382 INF: FPGA: Recv ZSGSRD 29850
17-03-17 21:43:30.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.708 -07 000000459 INF: FPGA: Recv ZSGSRD 29855
17-03-17 21:43:30.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.718 -07 000000569 INF: FPGA: Recv ZSGSRD 29854
17-03-17 21:43:30.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.728 -07 000000512 INF: FPGA: Recv ZSGSRD 29856
17-03-17 21:43:30.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.738 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:30.738 -07 000000012 INF: FPGA: Recv ZPIEZORD 25598
17-03-17 21:43:30.748 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.748 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.405 V. Piezo Error = -9.4 V.
17-03-17 21:43:30.748 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.1 um, Read 10 ADC samples: Avg = 29857 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29857 (-131.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29850 (-131.3 uncal um), Max = 29866 (-131.4 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:43:30.748 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29857, posNoise = 9, negNoise = 7
17-03-17 21:43:30.748 -07 000000610 INF: Z Motor: After move to -0.132136, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:30.748 -07 000000610 INF: Z Motor: Settle wait time = 1425 ms, measure time = 104 ms (allowed 150 ms), total time = 1529 ms
17-03-17 21:43:30.748 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:30.798 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms
17-03-17 21:43:30.798 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:30.798 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.132131053927692. ----------
17-03-17 21:43:30.798 -07 000000610 INF: Cycle	54	Tile	9	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:30.798 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28689, sync = True, waitForSettling = True)
17-03-17 21:43:30.798 -07 000000610 INF: Z Motor: Moving to -0.131330 mm, started at -0.132131 mm, distance = 0.80 um
17-03-17 21:43:30.798 -07 000000610 INF: FPGA: Xmit ZDACW 28689\n [Z Motor]
17-03-17 21:43:30.798 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:43:30.808 -07 000000610 INF: FPGA: 'ZDACW 28689' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:30.808 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:30.808 -07 000000480 INF: FPGA: Recv ZDACR 28689
17-03-17 21:43:30.818 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.818 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:30.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.968 -07 000000569 INF: FPGA: Recv ZSGSRD 29730
17-03-17 21:43:30.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:30.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.978 -07 000000429 INF: FPGA: Recv ZSGSRD 29737
17-03-17 21:43:30.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.988 -07 000000547 INF: FPGA: Recv ZSGSRD 29733
17-03-17 21:43:30.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:30.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:30.998 -07 000000608 INF: FPGA: Recv ZSGSRD 29729
17-03-17 21:43:31.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:31.008 -07 000000512 INF: FPGA: Recv ZSGSRD 29734
17-03-17 21:43:31.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:31.018 -07 000000476 INF: FPGA: Recv ZSGSRD 29731
17-03-17 21:43:31.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:31.028 -07 000000626 INF: FPGA: Recv ZSGSRD 29734
17-03-17 21:43:31.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:31.038 -07 000000415 INF: FPGA: Recv ZSGSRD 29732
17-03-17 21:43:31.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:31.048 -07 000000608 INF: FPGA: Recv ZSGSRD 29732
17-03-17 21:43:31.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:31.058 -07 000000458 INF: FPGA: Recv ZSGSRD 29732
17-03-17 21:43:31.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.068 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:31.068 -07 000000569 INF: FPGA: Recv ZPIEZORD 25445
17-03-17 21:43:31.078 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:31.078 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.378 V. Piezo Error = -9.4 V.
17-03-17 21:43:31.078 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29732 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29732 (-130.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29729 (-130.5 uncal um), Max = 29737 (-130.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:43:31.078 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29732, posNoise = 5, negNoise = 3
17-03-17 21:43:31.078 -07 000000610 INF: Z Motor: After move to -0.131330, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:31.078 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:43:31.078 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:31.078 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:31.078 -07 000000415 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:31.078 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:31.078 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:31.078 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:31.078 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:31.078 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:31.078 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:31.078 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:31.078 -07 000000458 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:43:31.078 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:31.088 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:43:31.088 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:31.088 -07 000000458 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:43:31.088 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:31.098 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:43:31.098 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:43:31.098 -07 000000458 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:43:31.098 -07 000000458 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:43:31.098 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28865 150\n [Camera]
17-03-17 21:43:31.298 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:31.738 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:31.738 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:31.738 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:31.738 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:31.738 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:31.738 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:31.748 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:31.748 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:31.748 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:31.748 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:43:31.908 -07 000000476 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:31.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:31.928 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28865 822
17-03-17 21:43:32.078 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:32.118 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 21:43:32.118 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:43:32.118 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:32.118 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:32.118 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:43:32.118 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-17 21:43:32.118 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:32.128 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:32.128 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:43:32.128 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:43:32.288 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:32.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:32.288 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:32.288 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:32.298 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:43:32.298 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:32.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:32.298 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:32.298 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:32.298 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:43:32.478 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:43:32.488 -07 000000415 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:32.488 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28865 150' command took 2 ms to send, 1370 ms to get response, and 1381 ms overall
17-03-17 21:43:32.488 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.132099
17-03-17 21:43:32.488 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13210 mm
17-03-17 21:43:32.488 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:32.488 -07 000000012 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 21:43:32.488 -07 000000012 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-17 21:43:32.488 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:32.488 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 28857, sync = True, waitForSettling = False)
17-03-17 21:43:32.488 -07 000000429 INF: Z Motor: Moving to -0.132099 mm, started at -0.131328 mm, distance = -0.77 um
17-03-17 21:43:32.488 -07 000000459 INF: FPGA: Recv YRDPOS 136272
17-03-17 21:43:32.498 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:32.498 -07 000000012 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:32.498 -07 000000012 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:32.498 -07 000000012 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:43:32.498 -07 000000429 INF: FPGA: Xmit ZDACW 28857\n [Z Motor]
17-03-17 21:43:32.498 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:43:32.508 -07 000000429 INF: FPGA: 'ZDACW 28857' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:43:32.508 -07 000000012 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:32.518 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:32.518 -07 000000480 INF: FPGA: Recv ZDACR 28857
17-03-17 21:43:32.528 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:32.528 -07 000000429 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-17 21:43:32.678 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:43:32.678 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:43:32.678 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:32.678 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:43:32.678 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 21:43:32.678 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:32.678 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:32.678 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:43:32.678 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:32.688 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:43:32.878 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-17 21:43:32.878 -07 000000012 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall
17-03-17 21:43:32.918 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:32.918 -07 000000424 INF: FPGA: Recv YRDPOS 137978
17-03-17 21:43:32.928 -07 000000012 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:32.928 -07 000000012 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:32.928 -07 000000012 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm)
17-03-17 21:43:32.928 -07 000000012 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-17 21:43:33.878 -07 000000012 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:33.878 -07 000000459 INF: FPGA: Recv YRDPOS 137978
17-03-17 21:43:33.888 -07 000000012 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.888 -07 000000012 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:33.908 -07 000000012 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:33.908 -07 000000012 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:33.908 -07 000000012 INF: Y Motor: Moved to 67.3721 after 1417 ms (table move)
17-03-17 21:43:33.908 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132099 mm (DAC = 28857)
17-03-17 21:43:33.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.918 -07 000000424 INF: FPGA: Recv ZSGSRD 29861
17-03-17 21:43:33.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:33.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.918 -07 000000431 INF: FPGA: Recv ZSGSRD 29848
17-03-17 21:43:33.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.928 -07 000000012 INF: FPGA: Recv ZSGSRD 29851
17-03-17 21:43:33.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.938 -07 000000627 INF: FPGA: Recv ZSGSRD 29853
17-03-17 21:43:33.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.948 -07 000000438 INF: FPGA: Recv ZSGSRD 29854
17-03-17 21:43:33.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.958 -07 000000429 INF: FPGA: Recv ZSGSRD 29850
17-03-17 21:43:33.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.968 -07 000000569 INF: FPGA: Recv ZSGSRD 29848
17-03-17 21:43:33.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.978 -07 000000012 INF: FPGA: Recv ZSGSRD 29856
17-03-17 21:43:33.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.988 -07 000000476 INF: FPGA: Recv ZSGSRD 29845
17-03-17 21:43:33.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:33.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:33.998 -07 000000512 INF: FPGA: Recv ZSGSRD 29861
17-03-17 21:43:34.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.008 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:34.008 -07 000000626 INF: FPGA: Recv ZPIEZORD 25687
17-03-17 21:43:34.018 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.018 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.403 V. Piezo Error = -9.2 V.
17-03-17 21:43:34.018 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.1 um, Read 10 ADC samples: Avg = 29853 (-131.3 uncal um), Error = 0.8 uncal um, Median = 29852 (-131.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29845 (-131.3 uncal um), Max = 29861 (-131.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:43:34.018 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29853, posNoise = 8, negNoise = 8
17-03-17 21:43:34.018 -07 000000610 INF: Z Motor: After move to -0.132099, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:34.018 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 105 ms (allowed 150 ms), total time = 1524 ms
17-03-17 21:43:34.018 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:34.068 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1577 ms
17-03-17 21:43:34.068 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:34.068 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.132105357079125. ----------
17-03-17 21:43:34.068 -07 000000610 INF: Cycle	54	Tile	10	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:34.068 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28680, sync = True, waitForSettling = True)
17-03-17 21:43:34.068 -07 000000610 INF: Z Motor: Moving to -0.131289 mm, started at -0.132105 mm, distance = 0.82 um
17-03-17 21:43:34.068 -07 000000610 INF: FPGA: Xmit ZDACW 28680\n [Z Motor]
17-03-17 21:43:34.068 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:43:34.078 -07 000000610 INF: FPGA: 'ZDACW 28680' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:34.078 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:34.078 -07 000000458 INF: FPGA: Recv ZDACR 28680
17-03-17 21:43:34.088 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.088 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:34.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.238 -07 000000475 INF: FPGA: Recv ZSGSRD 29728
17-03-17 21:43:34.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:34.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.248 -07 000000608 INF: FPGA: Recv ZSGSRD 29732
17-03-17 21:43:34.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.258 -07 000000480 INF: FPGA: Recv ZSGSRD 29729
17-03-17 21:43:34.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.268 -07 000000512 INF: FPGA: Recv ZSGSRD 29724
17-03-17 21:43:34.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.278 -07 000000459 INF: FPGA: Recv ZSGSRD 29729
17-03-17 21:43:34.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.288 -07 000000627 INF: FPGA: Recv ZSGSRD 29722
17-03-17 21:43:34.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.298 -07 000000012 INF: FPGA: Recv ZSGSRD 29725
17-03-17 21:43:34.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.308 -07 000000431 INF: FPGA: Recv ZSGSRD 29723
17-03-17 21:43:34.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.318 -07 000000608 INF: FPGA: Recv ZSGSRD 29726
17-03-17 21:43:34.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:34.328 -07 000000512 INF: FPGA: Recv ZSGSRD 29730
17-03-17 21:43:34.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.338 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:34.338 -07 000000626 INF: FPGA: Recv ZPIEZORD 25480
17-03-17 21:43:34.348 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:34.348 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.3 V.
17-03-17 21:43:34.348 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29727 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29727 (-130.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29722 (-130.5 uncal um), Max = 29732 (-130.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:43:34.348 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29727, posNoise = 5, negNoise = 5
17-03-17 21:43:34.348 -07 000000610 INF: Z Motor: After move to -0.131289, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:34.348 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:43:34.348 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:34.348 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:34.348 -07 000000459 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:34.348 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:34.348 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:34.348 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:34.348 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:34.348 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:34.348 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:34.348 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:34.348 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:34.348 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:34.348 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:34.348 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:34.348 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:34.358 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:34.368 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:43:34.368 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:43:34.368 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:43:34.368 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 21:43:34.368 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28857 150\n [Camera]
17-03-17 21:43:34.568 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:34.828 -07 000000012 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.971733,
17-03-17 21:43:35.008 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:35.008 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:35.008 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:35.008 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:35.008 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:43:35.018 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:35.018 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:35.018 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:35.128 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:35.128 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:43:35.198 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28857 822
17-03-17 21:43:35.348 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:35.408 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 21:43:35.408 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:43:35.408 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:35.408 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 21:43:35.408 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 21:43:35.528 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 395 ms.
17-03-17 21:43:35.528 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 21:43:35.528 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:35.528 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:35.538 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 524 ms.
17-03-17 21:43:35.558 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:35.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:35.558 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:35.568 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:35.568 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:35.568 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:35.568 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:35.568 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:35.568 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:35.568 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:43:35.748 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:35.748 -07 000000475 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:35.748 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28857 150' command took 2 ms to send, 1369 ms to get response, and 1382 ms overall
17-03-17 21:43:35.758 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:43:35.758 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.3720703125, Z-Position -0.131295906349263. ------
17-03-17 21:43:35.758 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:35.758 -07 000000382 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13782 mm
17-03-17 21:43:35.758 -07 000000382 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:35.758 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:35.758 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 21:43:35.758 -07 000000512 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-17 21:43:35.758 -07 000000431 INF: Z Motor: Entering MoveAbsStepped (DAC = 30106, sync = True, waitForSettling = False)
17-03-17 21:43:35.758 -07 000000431 INF: Z Motor: Moving to -0.137816 mm, started at -0.131296 mm, distance = -6.52 um
17-03-17 21:43:35.768 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:43:35.768 -07 000000431 INF: FPGA: Xmit ZDACW 30106\n [Z Motor]
17-03-17 21:43:35.768 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:43:35.778 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:43:35.778 -07 000000431 INF: FPGA: 'ZDACW 30106' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:35.788 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:35.788 -07 000000458 INF: FPGA: Recv YRDPOS 137979
17-03-17 21:43:35.798 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-17 21:43:35.798 -07 000000512 INF: Y Motor: Encoder = 137979 = motor step 107796.1 = 67.3726 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:35.798 -07 000000431 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:35.798 -07 000000475 INF: FPGA: Recv ZDACR 30106
17-03-17 21:43:35.798 -07 000000512 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:35.798 -07 000000512 INF: Y Motor: Moving 1344 steps-22
17-03-17 21:43:35.808 -07 000000431 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:43:35.808 -07 000000431 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-17 21:43:35.808 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:35.938 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:43:35.938 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:43:35.938 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:35.948 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:35.948 -07 000000438 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 21:43:35.948 -07 000000438 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 21:43:35.948 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:35.948 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:35.948 -07 000000438 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:43:35.948 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:43:35.978 -07 000000475 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:43:35.978 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 212 ms overall
17-03-17 21:43:36.178 -07 000000476 INF: FPGA: Recv YMVTILE
17-03-17 21:43:36.178 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-17 21:43:36.218 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:36.228 -07 000000627 INF: FPGA: Recv YRDPOS 139684
17-03-17 21:43:36.228 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:43:36.228 -07 000000512 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:36.228 -07 000000512 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-17 21:43:36.228 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.841 mm, average velocity = 2.183 mm/sec
17-03-17 21:43:36.908 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:36.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:37.178 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:37.178 -07 000000012 INF: FPGA: Recv YRDPOS 139684
17-03-17 21:43:37.188 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:37.188 -07 000000512 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:37.208 -07 000000512 INF: Y Motor: After move to 68.212608, error = -0.007530, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:37.208 -07 000000512 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:37.208 -07 000000512 INF: Y Motor: Moved to 68.2051 after 1443 ms (table move)
17-03-17 21:43:37.208 -07 000000382 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137816 mm (DAC = 30106)
17-03-17 21:43:37.208 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.218 -07 000000501 INF: FPGA: Recv ZSGSRD 30742
17-03-17 21:43:37.218 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:43:37.218 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.218 -07 000000424 INF: FPGA: Recv ZSGSRD 30744
17-03-17 21:43:37.228 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:43:37.228 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.228 -07 000000626 INF: FPGA: Recv ZSGSRD 30746
17-03-17 21:43:37.238 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.238 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.238 -07 000000608 INF: FPGA: Recv ZSGSRD 30745
17-03-17 21:43:37.248 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.248 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.248 -07 000000569 INF: FPGA: Recv ZSGSRD 30743
17-03-17 21:43:37.258 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.258 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.258 -07 000000459 INF: FPGA: Recv ZSGSRD 30748
17-03-17 21:43:37.268 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.268 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.268 -07 000000627 INF: FPGA: Recv ZSGSRD 30737
17-03-17 21:43:37.278 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.278 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.278 -07 000000431 INF: FPGA: Recv ZSGSRD 30743
17-03-17 21:43:37.288 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.288 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.288 -07 000000547 INF: FPGA: Recv ZSGSRD 30741
17-03-17 21:43:37.298 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.298 -07 000000382 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:37.298 -07 000000424 INF: FPGA: Recv ZSGSRD 30743
17-03-17 21:43:37.308 -07 000000382 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.308 -07 000000382 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:37.308 -07 000000459 INF: FPGA: Recv ZPIEZORD 26831
17-03-17 21:43:37.318 -07 000000382 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:37.318 -07 000000382 INF: Z Motor: Piezo is near 37.3 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.594 V. Piezo Error = -8.6 V.
17-03-17 21:43:37.318 -07 000000382 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.8 um, Read 10 ADC samples: Avg = 30743 (-137.0 uncal um), Error = 0.8 uncal um, Median = 30743 (-137.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30737 (-137.0 uncal um), Max = 30748 (-137.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:43:37.318 -07 000000382 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30743, posNoise = 5, negNoise = 6
17-03-17 21:43:37.318 -07 000000382 INF: Z Motor: After move to -0.137816, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:37.318 -07 000000382 INF: Z Motor: Settle wait time = 1446 ms, measure time = 104 ms (allowed 150 ms), total time = 1550 ms
17-03-17 21:43:37.318 -07 000000382 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:37.368 -07 000000382 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-17 21:43:37.368 -07 000000382 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:37.368 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:37.368 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:37.368 -07 000000431 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:37.368 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:37.368 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:43:37.368 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:37.368 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:43:37.368 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:43:37.378 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:37.378 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:43:37.388 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 21:43:37.388 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 21:43:37.388 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:43:37.438 -07 000000431 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:43:37.638 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:43:37.638 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:43:37.638 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:43:37.638 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 21:43:37.678 -07 000000480 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:43:37.678 -07 000000415 INF: FPGA: Recv CAMSNAP
17-03-17 21:43:37.678 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 284 ms overall
17-03-17 21:43:37.758 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 121 ms.
17-03-17 21:43:37.758 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:37.758 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:43:37.758 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 124 ms.
17-03-17 21:43:37.778 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:37.778 -07 000000608 INF: Autofocus start
17-03-17 21:43:37.778 -07 000000608 INF: MeasureProfile start
17-03-17 21:43:37.778 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:37.788 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:37.788 -07 000000626 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:43:37.788 -07 000000608 INF: MeasureProfile done
17-03-17 21:43:37.788 -07 000000608 INF: X=-25  Z correction [um]=-0.1250985
17-03-17 21:43:37.788 -07 000000608 INF: Autofocus finished
17-03-17 21:43:37.988 -07 000000431 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:43:37.988 -07 000000626 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:43:37.988 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.205078125, Z-position -0.137822905885292. ----------
17-03-17 21:43:37.998 -07 000000610 INF: Cycle	54	Tile	11	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:37.998 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28591, sync = True, waitForSettling = True)
17-03-17 21:43:37.998 -07 000000610 INF: Z Motor: Moving to -0.130881 mm, started at -0.137823 mm, distance = 6.94 um
17-03-17 21:43:37.998 -07 000000610 INF: FPGA: Xmit ZDACW 28591\n [Z Motor]
17-03-17 21:43:37.998 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 21:43:38.008 -07 000000610 INF: FPGA: 'ZDACW 28591' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:43:38.008 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:38.008 -07 000000501 INF: FPGA: Recv ZDACR 28591
17-03-17 21:43:38.018 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.018 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:38.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.168 -07 000000431 INF: FPGA: Recv ZSGSRD 29662
17-03-17 21:43:38.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:38.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.178 -07 000000012 INF: FPGA: Recv ZSGSRD 29655
17-03-17 21:43:38.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.188 -07 000000459 INF: FPGA: Recv ZSGSRD 29663
17-03-17 21:43:38.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.198 -07 000000438 INF: FPGA: Recv ZSGSRD 29666
17-03-17 21:43:38.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.208 -07 000000476 INF: FPGA: Recv ZSGSRD 29660
17-03-17 21:43:38.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.218 -07 000000547 INF: FPGA: Recv ZSGSRD 29662
17-03-17 21:43:38.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.228 -07 000000608 INF: FPGA: Recv ZSGSRD 29659
17-03-17 21:43:38.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.238 -07 000000475 INF: FPGA: Recv ZSGSRD 29668
17-03-17 21:43:38.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.248 -07 000000576 INF: FPGA: Recv ZSGSRD 29658
17-03-17 21:43:38.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:38.258 -07 000000382 INF: FPGA: Recv ZSGSRD 29662
17-03-17 21:43:38.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.268 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:38.268 -07 000000429 INF: FPGA: Recv ZPIEZORD 25391
17-03-17 21:43:38.278 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:38.278 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.363 V. Piezo Error = -9.4 V.
17-03-17 21:43:38.278 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29662 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29662 (-130.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29655 (-130.1 uncal um), Max = 29668 (-130.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:43:38.278 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29662, posNoise = 6, negNoise = 7
17-03-17 21:43:38.278 -07 000000610 INF: Z Motor: After move to -0.130881, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:38.278 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 21:43:38.278 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:38.278 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:38.278 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:38.278 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:38.278 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:38.278 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:38.278 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:38.278 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:38.278 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:38.278 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:38.278 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:38.278 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:38.278 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:43:38.278 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:38.288 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:38.288 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:38.288 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:43:38.288 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:43:38.298 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 21:43:38.298 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:43:38.298 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28768 150\n [Camera]
17-03-17 21:43:38.498 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:38.938 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:38.938 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:38.938 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:38.938 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:38.938 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 21:43:38.938 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:38.938 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:38.938 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:38.938 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:38.938 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 21:43:39.128 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28768 822
17-03-17 21:43:39.278 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:39.308 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 21:43:39.308 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 21:43:39.308 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:39.318 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:43:39.318 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 21:43:39.318 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:39.318 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:39.318 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:39.318 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:43:39.328 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:43:39.488 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:39.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:39.488 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:39.608 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:39.608 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:39.608 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:39.608 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 21:43:39.608 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:39.608 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:39.608 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:43:39.678 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:39.678 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:39.678 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28768 150' command took 2 ms to send, 1375 ms to get response, and 1381 ms overall
17-03-17 21:43:39.678 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.131549
17-03-17 21:43:39.678 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13155 mm
17-03-17 21:43:39.678 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:39.688 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 21:43:39.688 -07 000000576 INF: Y Motor: Moving to 69.0426 mm, started at 68.2051 mm, delta = 0.8375 mm
17-03-17 21:43:39.688 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 28737, sync = True, waitForSettling = False)
17-03-17 21:43:39.688 -07 000000429 INF: Z Motor: Moving to -0.131550 mm, started at -0.130878 mm, distance = -0.67 um
17-03-17 21:43:39.688 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:39.688 -07 000000431 INF: FPGA: Recv YRDPOS 139685
17-03-17 21:43:39.698 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:39.698 -07 000000576 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:39.698 -07 000000429 INF: FPGA: Xmit ZDACW 28737\n [Z Motor]
17-03-17 21:43:39.698 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:43:39.698 -07 000000576 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:39.698 -07 000000576 INF: Y Motor: Moving 1339 steps-15
17-03-17 21:43:39.708 -07 000000429 INF: FPGA: 'ZDACW 28737' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:39.708 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:39.708 -07 000000626 INF: FPGA: Recv ZDACR 28737
17-03-17 21:43:39.718 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:39.718 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:39.718 -07 000000429 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 21:43:39.998 -07 000000438 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 391 ms.
17-03-17 21:43:39.998 -07 000000438 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:43:39.998 -07 000000438 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:40.008 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 398 ms.
17-03-17 21:43:40.008 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 21:43:40.008 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:40.008 -07 000000438 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:40.008 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:40.008 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 521 ms.
17-03-17 21:43:40.018 -07 000000438 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-17 21:43:40.088 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 21:43:40.088 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-17 21:43:40.128 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:40.128 -07 000000626 INF: FPGA: Recv YRDPOS 141368
17-03-17 21:43:40.138 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:40.138 -07 000000576 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:40.138 -07 000000576 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 21:43:40.138 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.838 mm, average velocity = 2.126 mm/sec
17-03-17 21:43:40.198 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.001704,
17-03-17 21:43:41.088 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:41.088 -07 000000431 INF: FPGA: Recv YRDPOS 141369
17-03-17 21:43:41.098 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.098 -07 000000576 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:41.118 -07 000000576 INF: Y Motor: After move to 69.042610, error = -0.014778, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:41.118 -07 000000576 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:43:41.118 -07 000000576 INF: Y Motor: Moved to 69.0278 after 1433 ms (table move)
17-03-17 21:43:41.118 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131550 mm (DAC = 28737)
17-03-17 21:43:41.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.118 -07 000000627 INF: FPGA: Recv ZSGSRD 29768
17-03-17 21:43:41.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:41.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.128 -07 000000012 INF: FPGA: Recv ZSGSRD 29759
17-03-17 21:43:41.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.138 -07 000000569 INF: FPGA: Recv ZSGSRD 29775
17-03-17 21:43:41.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.148 -07 000000424 INF: FPGA: Recv ZSGSRD 29767
17-03-17 21:43:41.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.158 -07 000000576 INF: FPGA: Recv ZSGSRD 29769
17-03-17 21:43:41.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.168 -07 000000429 INF: FPGA: Recv ZSGSRD 29771
17-03-17 21:43:41.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.178 -07 000000382 INF: FPGA: Recv ZSGSRD 29765
17-03-17 21:43:41.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.188 -07 000000438 INF: FPGA: Recv ZSGSRD 29760
17-03-17 21:43:41.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.198 -07 000000431 INF: FPGA: Recv ZSGSRD 29762
17-03-17 21:43:41.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.208 -07 000000459 INF: FPGA: Recv ZSGSRD 29767
17-03-17 21:43:41.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.218 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:41.218 -07 000000475 INF: FPGA: Recv ZPIEZORD 25561
17-03-17 21:43:41.228 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.228 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.385 V. Piezo Error = -9.2 V.
17-03-17 21:43:41.228 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29766 (-130.8 uncal um), Error = 0.8 uncal um, Median = 29767 (-130.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29759 (-130.7 uncal um), Max = 29775 (-130.8 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:43:41.228 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29766, posNoise = 9, negNoise = 7
17-03-17 21:43:41.228 -07 000000610 INF: Z Motor: After move to -0.131550, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:41.228 -07 000000610 INF: Z Motor: Settle wait time = 1436 ms, measure time = 104 ms (allowed 150 ms), total time = 1540 ms
17-03-17 21:43:41.228 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:41.278 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-17 21:43:41.278 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:41.278 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02783203125, Z-position -0.131546450622792. ----------
17-03-17 21:43:41.278 -07 000000610 INF: Cycle	54	Tile	12	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:41.278 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28560, sync = True, waitForSettling = True)
17-03-17 21:43:41.278 -07 000000610 INF: Z Motor: Moving to -0.130739 mm, started at -0.131546 mm, distance = 0.81 um
17-03-17 21:43:41.278 -07 000000610 INF: FPGA: Xmit ZDACW 28560\n [Z Motor]
17-03-17 21:43:41.278 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:43:41.288 -07 000000610 INF: FPGA: 'ZDACW 28560' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:41.288 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:41.288 -07 000000458 INF: FPGA: Recv ZDACR 28560
17-03-17 21:43:41.298 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.298 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:41.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.448 -07 000000480 INF: FPGA: Recv ZSGSRD 29640
17-03-17 21:43:41.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:41.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.458 -07 000000415 INF: FPGA: Recv ZSGSRD 29644
17-03-17 21:43:41.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.468 -07 000000475 INF: FPGA: Recv ZSGSRD 29644
17-03-17 21:43:41.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.478 -07 000000431 INF: FPGA: Recv ZSGSRD 29637
17-03-17 21:43:41.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.488 -07 000000512 INF: FPGA: Recv ZSGSRD 29642
17-03-17 21:43:41.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.498 -07 000000501 INF: FPGA: Recv ZSGSRD 29644
17-03-17 21:43:41.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.508 -07 000000459 INF: FPGA: Recv ZSGSRD 29650
17-03-17 21:43:41.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.518 -07 000000569 INF: FPGA: Recv ZSGSRD 29648
17-03-17 21:43:41.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.528 -07 000000382 INF: FPGA: Recv ZSGSRD 29632
17-03-17 21:43:41.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:41.538 -07 000000438 INF: FPGA: Recv ZSGSRD 29646
17-03-17 21:43:41.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.548 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:41.548 -07 000000424 INF: FPGA: Recv ZPIEZORD 25379
17-03-17 21:43:41.558 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:41.558 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.358 V. Piezo Error = -9.4 V.
17-03-17 21:43:41.558 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29643 (-130.0 uncal um), Error = 0.8 uncal um, Median = 29644 (-130.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29632 (-129.9 uncal um), Max = 29650 (-130.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:43:41.558 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29643, posNoise = 7, negNoise = 11
17-03-17 21:43:41.558 -07 000000610 INF: Z Motor: After move to -0.130739, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:41.558 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:43:41.558 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:41.558 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:41.558 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:41.558 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:41.558 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:41.558 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:41.558 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:41.558 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:41.558 -07 000000476 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:41.558 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 21:43:41.558 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:41.558 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:41.568 -07 000000476 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:41.568 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:41.568 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:41.568 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:41.568 -07 000000476 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 21:43:41.568 -07 000000476 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:43:41.578 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:43:41.578 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:43:41.578 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28737 150\n [Camera]
17-03-17 21:43:41.778 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:41.908 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:41.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:42.218 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:42.218 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:42.218 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:42.218 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:42.218 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:42.218 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:42.218 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:42.218 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:42.228 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:42.228 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:43:42.408 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28737 822
17-03-17 21:43:42.558 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:42.598 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 21:43:42.598 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 21:43:42.598 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:42.598 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 372 ms.
17-03-17 21:43:42.598 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 21:43:42.598 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:42.598 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:42.598 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:42.598 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:43:42.608 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:43:42.768 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:42.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:42.768 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:42.768 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:42.768 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:42.768 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:42.768 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:43:42.768 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:42.768 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:42.768 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:43:42.958 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:42.958 -07 000000458 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:42.958 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28737 150' command took 2 ms to send, 1374 ms to get response, and 1381 ms overall
17-03-17 21:43:42.958 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.131156
17-03-17 21:43:42.958 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13116 mm
17-03-17 21:43:42.958 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:42.958 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 21:43:42.958 -07 000000501 INF: Y Motor: Moving to 69.8726 mm, started at 69.0278 mm, delta = 0.8448 mm
17-03-17 21:43:42.958 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:42.958 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 28651, sync = True, waitForSettling = False)
17-03-17 21:43:42.958 -07 000000569 INF: Z Motor: Moving to -0.131156 mm, started at -0.130756 mm, distance = -0.40 um
17-03-17 21:43:42.968 -07 000000569 INF: FPGA: Xmit ZDACW 28651\n [Z Motor]
17-03-17 21:43:42.968 -07 000000431 INF: FPGA: Recv YRDPOS 141369
17-03-17 21:43:42.968 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 5 ms to get response, and 6 ms overall
17-03-17 21:43:42.968 -07 000000501 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:42.968 -07 000000501 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:42.968 -07 000000501 INF: Y Motor: Moving 1352 steps-31
17-03-17 21:43:42.968 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 21:43:42.978 -07 000000569 INF: FPGA: 'ZDACW 28651' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:42.978 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:42.978 -07 000000459 INF: FPGA: Recv ZDACR 28651
17-03-17 21:43:42.988 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:42.988 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:42.988 -07 000000569 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 21:43:43.148 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:43:43.148 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:43:43.148 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:43.148 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:43:43.148 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:43:43.148 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:43.158 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:43.158 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:43.158 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:43:43.168 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:43:43.358 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 21:43:43.358 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 392 ms overall
17-03-17 21:43:43.398 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:43.408 -07 000000012 INF: FPGA: Recv YRDPOS 143080
17-03-17 21:43:43.408 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:43.408 -07 000000501 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:43.408 -07 000000501 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 21:43:43.408 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 392 ms, distance = 0.845 mm, average velocity = 2.155 mm/sec
17-03-17 21:43:44.358 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:44.358 -07 000000476 INF: FPGA: Recv YRDPOS 143081
17-03-17 21:43:44.368 -07 000000501 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:44.368 -07 000000501 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:44.388 -07 000000501 INF: Y Motor: After move to 69.872612, error = -0.008842, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:44.388 -07 000000501 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:43:44.388 -07 000000501 INF: Y Motor: Moved to 69.8638 after 1425 ms (table move)
17-03-17 21:43:44.388 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131156 mm (DAC = 28651)
17-03-17 21:43:44.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.398 -07 000000012 INF: FPGA: Recv ZSGSRD 29700
17-03-17 21:43:44.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:44.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.398 -07 000000459 INF: FPGA: Recv ZSGSRD 29700
17-03-17 21:43:44.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.408 -07 000000431 INF: FPGA: Recv ZSGSRD 29713
17-03-17 21:43:44.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.418 -07 000000424 INF: FPGA: Recv ZSGSRD 29704
17-03-17 21:43:44.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.428 -07 000000475 INF: FPGA: Recv ZSGSRD 29708
17-03-17 21:43:44.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.438 -07 000000547 INF: FPGA: Recv ZSGSRD 29710
17-03-17 21:43:44.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.448 -07 000000512 INF: FPGA: Recv ZSGSRD 29699
17-03-17 21:43:44.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.458 -07 000000501 INF: FPGA: Recv ZSGSRD 29705
17-03-17 21:43:44.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.468 -07 000000424 INF: FPGA: Recv ZSGSRD 29702
17-03-17 21:43:44.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.478 -07 000000627 INF: FPGA: Recv ZSGSRD 29701
17-03-17 21:43:44.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.488 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:44.488 -07 000000415 INF: FPGA: Recv ZPIEZORD 25469
17-03-17 21:43:44.498 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.498 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.372 V. Piezo Error = -9.3 V.
17-03-17 21:43:44.498 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29704 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29703 (-130.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29699 (-130.3 uncal um), Max = 29713 (-130.4 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:43:44.498 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29704, posNoise = 9, negNoise = 5
17-03-17 21:43:44.498 -07 000000610 INF: Z Motor: After move to -0.131156, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:44.498 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 105 ms (allowed 150 ms), total time = 1531 ms
17-03-17 21:43:44.498 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:44.548 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms
17-03-17 21:43:44.548 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:44.548 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86376953125, Z-position -0.131148149470002. ----------
17-03-17 21:43:44.548 -07 000000610 INF: Cycle	54	Tile	13	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:44.548 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28474, sync = True, waitForSettling = True)
17-03-17 21:43:44.548 -07 000000610 INF: Z Motor: Moving to -0.130346 mm, started at -0.131148 mm, distance = 0.80 um
17-03-17 21:43:44.548 -07 000000610 INF: FPGA: Xmit ZDACW 28474\n [Z Motor]
17-03-17 21:43:44.548 -07 000000431 INF: FPGA: Recv ZDACW
17-03-17 21:43:44.558 -07 000000610 INF: FPGA: 'ZDACW 28474' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:44.558 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:44.558 -07 000000547 INF: FPGA: Recv ZDACR 28474
17-03-17 21:43:44.568 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.568 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:44.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.718 -07 000000459 INF: FPGA: Recv ZSGSRD 29582
17-03-17 21:43:44.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:44.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.728 -07 000000501 INF: FPGA: Recv ZSGSRD 29583
17-03-17 21:43:44.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.738 -07 000000424 INF: FPGA: Recv ZSGSRD 29583
17-03-17 21:43:44.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.748 -07 000000475 INF: FPGA: Recv ZSGSRD 29578
17-03-17 21:43:44.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.758 -07 000000429 INF: FPGA: Recv ZSGSRD 29585
17-03-17 21:43:44.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.768 -07 000000424 INF: FPGA: Recv ZSGSRD 29579
17-03-17 21:43:44.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.778 -07 000000608 INF: FPGA: Recv ZSGSRD 29581
17-03-17 21:43:44.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.788 -07 000000547 INF: FPGA: Recv ZSGSRD 29578
17-03-17 21:43:44.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.798 -07 000000458 INF: FPGA: Recv ZSGSRD 29581
17-03-17 21:43:44.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:44.808 -07 000000429 INF: FPGA: Recv ZSGSRD 29582
17-03-17 21:43:44.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.818 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:44.818 -07 000000476 INF: FPGA: Recv ZPIEZORD 25300
17-03-17 21:43:44.828 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:44.828 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.345 V. Piezo Error = -9.4 V.
17-03-17 21:43:44.828 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29581 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29582 (-129.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29578 (-129.6 uncal um), Max = 29585 (-129.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 21:43:44.828 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29581, posNoise = 4, negNoise = 3
17-03-17 21:43:44.828 -07 000000610 INF: Z Motor: After move to -0.130346, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:44.828 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:43:44.828 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:44.828 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:44.828 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:44.828 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:44.828 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:44.828 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:44.828 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:44.828 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:44.828 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 21:43:44.828 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:44.828 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:44.828 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:44.838 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 21:43:44.838 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:44.838 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:44.838 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:44.848 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 21:43:44.848 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:43:44.848 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:43:44.848 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:43:44.858 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28651 150\n [Camera]
17-03-17 21:43:45.058 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:45.488 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:45.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:45.488 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:45.498 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:45.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:45.498 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:45.498 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:45.498 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:45.498 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:45.498 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:43:45.568 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.003063,
17-03-17 21:43:45.688 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28651 822
17-03-17 21:43:45.828 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:45.888 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 388 ms.
17-03-17 21:43:45.888 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 21:43:45.888 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:45.888 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 392 ms.
17-03-17 21:43:45.888 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:43:45.888 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:45.888 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:45.888 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:43:45.888 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:45.898 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 21:43:46.048 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:46.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:46.048 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:46.048 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:46.048 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:43:46.048 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:46.048 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:46.048 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:46.048 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:46.048 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:43:46.238 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:46.238 -07 000000438 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:46.238 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28651 150' command took 2 ms to send, 1372 ms to get response, and 1382 ms overall
17-03-17 21:43:46.238 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.130717
17-03-17 21:43:46.238 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13072 mm
17-03-17 21:43:46.238 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:46.238 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 21:43:46.238 -07 000000627 INF: Y Motor: Moving to 70.7026 mm, started at 69.8638 mm, delta = 0.8388 mm
17-03-17 21:43:46.238 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:46.238 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 28555, sync = True, waitForSettling = False)
17-03-17 21:43:46.238 -07 000000429 INF: Z Motor: Moving to -0.130716 mm, started at -0.130358 mm, distance = -0.36 um
17-03-17 21:43:46.248 -07 000000382 INF: FPGA: Recv YRDPOS 143081
17-03-17 21:43:46.248 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:46.248 -07 000000627 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:46.248 -07 000000627 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:46.248 -07 000000627 INF: Y Motor: Moving 1342 steps-19
17-03-17 21:43:46.248 -07 000000429 INF: FPGA: Xmit ZDACW 28555\n [Z Motor]
17-03-17 21:43:46.248 -07 000000458 INF: FPGA: Recv ZDACW
17-03-17 21:43:46.258 -07 000000429 INF: FPGA: 'ZDACW 28555' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:43:46.258 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:46.258 -07 000000569 INF: FPGA: Recv ZDACR 28555
17-03-17 21:43:46.268 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:46.268 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:46.268 -07 000000429 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-17 21:43:46.428 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 21:43:46.428 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:43:46.428 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:46.428 -07 000000476 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 21:43:46.428 -07 000000476 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 21:43:46.428 -07 000000476 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:46.428 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:46.428 -07 000000476 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:46.428 -07 000000476 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 21:43:46.438 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:43:46.648 -07 000000431 INF: FPGA: Recv YMVTILE
17-03-17 21:43:46.648 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 400 ms overall
17-03-17 21:43:46.678 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:46.688 -07 000000512 INF: FPGA: Recv YRDPOS 144770
17-03-17 21:43:46.688 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 21:43:46.688 -07 000000627 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:46.688 -07 000000627 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 21:43:46.688 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.839 mm, average velocity = 2.097 mm/sec
17-03-17 21:43:46.908 -07 000000012 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:46.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:47.638 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:47.638 -07 000000475 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:43:47.648 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.648 -07 000000627 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:47.668 -07 000000627 INF: Y Motor: After move to 70.702606, error = -0.013641, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:47.668 -07 000000627 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:43:47.668 -07 000000627 INF: Y Motor: Moved to 70.6890 after 1426 ms (table move)
17-03-17 21:43:47.668 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130716 mm (DAC = 28555)
17-03-17 21:43:47.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.678 -07 000000480 INF: FPGA: Recv ZSGSRD 29636
17-03-17 21:43:47.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:47.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.678 -07 000000431 INF: FPGA: Recv ZSGSRD 29639
17-03-17 21:43:47.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.688 -07 000000459 INF: FPGA: Recv ZSGSRD 29641
17-03-17 21:43:47.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.698 -07 000000475 INF: FPGA: Recv ZSGSRD 29640
17-03-17 21:43:47.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.708 -07 000000627 INF: FPGA: Recv ZSGSRD 29630
17-03-17 21:43:47.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:47.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.718 -07 000000012 INF: FPGA: Recv ZSGSRD 29636
17-03-17 21:43:47.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.728 -07 000000458 INF: FPGA: Recv ZSGSRD 29641
17-03-17 21:43:47.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.738 -07 000000480 INF: FPGA: Recv ZSGSRD 29646
17-03-17 21:43:47.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.748 -07 000000382 INF: FPGA: Recv ZSGSRD 29636
17-03-17 21:43:47.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.758 -07 000000438 INF: FPGA: Recv ZSGSRD 29639
17-03-17 21:43:47.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:47.768 -07 000000576 INF: FPGA: Recv ZPIEZORD 25380
17-03-17 21:43:47.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.778 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.357 V. Piezo Error = -9.4 V.
17-03-17 21:43:47.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29638 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29639 (-130.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29630 (-129.9 uncal um), Max = 29646 (-130.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:43:47.778 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29638, posNoise = 8, negNoise = 8
17-03-17 21:43:47.778 -07 000000610 INF: Z Motor: After move to -0.130716, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:47.778 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 103 ms (allowed 150 ms), total time = 1532 ms
17-03-17 21:43:47.778 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:47.828 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:43:47.828 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:47.828 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68896484375, Z-position -0.130724151468646. ----------
17-03-17 21:43:47.828 -07 000000610 INF: Cycle	54	Tile	14	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:47.828 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28378, sync = True, waitForSettling = True)
17-03-17 21:43:47.828 -07 000000610 INF: Z Motor: Moving to -0.129906 mm, started at -0.130724 mm, distance = 0.82 um
17-03-17 21:43:47.828 -07 000000610 INF: FPGA: Xmit ZDACW 28378\n [Z Motor]
17-03-17 21:43:47.828 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:43:47.838 -07 000000610 INF: FPGA: 'ZDACW 28378' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:47.838 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:47.838 -07 000000415 INF: FPGA: Recv ZDACR 28378
17-03-17 21:43:47.848 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:47.848 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:47.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:47.998 -07 000000501 INF: FPGA: Recv ZSGSRD 29515
17-03-17 21:43:48.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:48.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.008 -07 000000429 INF: FPGA: Recv ZSGSRD 29516
17-03-17 21:43:48.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.018 -07 000000459 INF: FPGA: Recv ZSGSRD 29511
17-03-17 21:43:48.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.028 -07 000000569 INF: FPGA: Recv ZSGSRD 29509
17-03-17 21:43:48.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.038 -07 000000415 INF: FPGA: Recv ZSGSRD 29508
17-03-17 21:43:48.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.048 -07 000000012 INF: FPGA: Recv ZSGSRD 29514
17-03-17 21:43:48.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.058 -07 000000438 INF: FPGA: Recv ZSGSRD 29518
17-03-17 21:43:48.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.068 -07 000000608 INF: FPGA: Recv ZSGSRD 29508
17-03-17 21:43:48.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.078 -07 000000627 INF: FPGA: Recv ZSGSRD 29508
17-03-17 21:43:48.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:48.088 -07 000000547 INF: FPGA: Recv ZSGSRD 29512
17-03-17 21:43:48.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.098 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:48.098 -07 000000424 INF: FPGA: Recv ZPIEZORD 25227
17-03-17 21:43:48.108 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:48.108 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.330 V. Piezo Error = -9.4 V.
17-03-17 21:43:48.108 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.9 um, Read 10 ADC samples: Avg = 29512 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29512 (-129.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29508 (-129.1 uncal um), Max = 29518 (-129.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:48.108 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29512, posNoise = 6, negNoise = 4
17-03-17 21:43:48.108 -07 000000610 INF: Z Motor: After move to -0.129906, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:48.108 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 21:43:48.108 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:48.108 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:48.108 -07 000000459 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:48.108 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:48.108 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:48.108 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:48.108 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:48.108 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:48.108 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:48.108 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:48.108 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:48.108 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:48.118 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:48.118 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:48.118 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:48.118 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:48.128 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 21:43:48.128 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 21:43:48.128 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 21:43:48.128 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:43:48.128 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28555 150\n [Camera]
17-03-17 21:43:48.328 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:48.768 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 632
17-03-17 21:43:48.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 632
17-03-17 21:43:48.768 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:48.768 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:48.768 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:43:48.778 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 632
17-03-17 21:43:48.778 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 632
17-03-17 21:43:48.778 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:48.888 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:48.888 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:43:48.958 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28555 822
17-03-17 21:43:49.108 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:49.148 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:43:49.148 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:43:49.148 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:49.158 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:49.158 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:43:49.258 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 368 ms.
17-03-17 21:43:49.258 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 368 ms.
17-03-17 21:43:49.258 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:49.268 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:43:49.268 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 496 ms.
17-03-17 21:43:49.318 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:49.318 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:49.318 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:49.328 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:49.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:49.328 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:49.338 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:49.338 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:43:49.338 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:49.338 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:43:49.508 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1374
17-03-17 21:43:49.508 -07 000000627 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:49.518 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28555 150' command took 2 ms to send, 1369 ms to get response, and 1381 ms overall
17-03-17 21:43:49.518 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:43:49.518 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68896484375, Z-Position -0.129914700738784. ------
17-03-17 21:43:49.518 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:49.518 -07 000000459 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13613 mm
17-03-17 21:43:49.518 -07 000000459 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:49.518 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:49.528 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:49.528 -07 000000576 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:43:49.528 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 21:43:49.528 -07 000000429 INF: Y Motor: Moving to 71.5326 mm, started at 70.6890 mm, delta = 0.8436 mm
17-03-17 21:43:49.528 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 29738, sync = True, waitForSettling = False)
17-03-17 21:43:49.528 -07 000000627 INF: Z Motor: Moving to -0.136132 mm, started at -0.129915 mm, distance = -6.22 um
17-03-17 21:43:49.538 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:49.538 -07 000000569 INF: FPGA: Recv YRDPOS 144771
17-03-17 21:43:49.548 -07 000000627 INF: FPGA: Xmit ZDACW 29738\n [Z Motor]
17-03-17 21:43:49.548 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 21:43:49.548 -07 000000429 INF: Y Motor: Encoder = 144771 = motor step 113102.3 = 70.6890 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:49.548 -07 000000429 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:49.548 -07 000000429 INF: Y Motor: Moving 1350 steps-29
17-03-17 21:43:49.548 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 21:43:49.558 -07 000000627 INF: FPGA: 'ZDACW 29738' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 21:43:49.558 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:49.568 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:49.568 -07 000000382 INF: FPGA: Recv ZDACR 29738
17-03-17 21:43:49.578 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:49.578 -07 000000627 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-17 21:43:49.718 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:43:49.718 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 21:43:49.718 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:49.718 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:43:49.718 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:43:49.718 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:49.718 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:49.718 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 21:43:49.718 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:49.728 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:43:49.728 -07 000000576 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:43:49.728 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 21:43:49.928 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-17 21:43:49.928 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 21:43:49.968 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:49.968 -07 000000626 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:43:49.978 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:49.978 -07 000000429 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:49.978 -07 000000429 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 21:43:49.978 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-17 21:43:50.938 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:50.938 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 3.98264,
17-03-17 21:43:50.938 -07 000000547 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:43:50.948 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:50.948 -07 000000429 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:50.968 -07 000000429 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:50.968 -07 000000429 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:50.968 -07 000000429 INF: Y Motor: Moved to 71.5190 after 1443 ms (table move)
17-03-17 21:43:50.978 -07 000000459 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136132 mm (DAC = 29738)
17-03-17 21:43:50.988 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:50.988 -07 000000626 INF: FPGA: Recv ZSGSRD 30482
17-03-17 21:43:50.998 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:50.998 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:50.998 -07 000000627 INF: FPGA: Recv ZSGSRD 30480
17-03-17 21:43:51.008 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.018 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.018 -07 000000429 INF: FPGA: Recv ZSGSRD 30475
17-03-17 21:43:51.028 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:51.028 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.028 -07 000000431 INF: FPGA: Recv ZSGSRD 30479
17-03-17 21:43:51.038 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.038 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.038 -07 000000438 INF: FPGA: Recv ZSGSRD 30486
17-03-17 21:43:51.048 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.048 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.048 -07 000000512 INF: FPGA: Recv ZSGSRD 30470
17-03-17 21:43:51.058 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.058 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.058 -07 000000382 INF: FPGA: Recv ZSGSRD 30485
17-03-17 21:43:51.068 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.068 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.068 -07 000000458 INF: FPGA: Recv ZSGSRD 30479
17-03-17 21:43:51.078 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.078 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.078 -07 000000431 INF: FPGA: Recv ZSGSRD 30485
17-03-17 21:43:51.088 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.088 -07 000000459 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.088 -07 000000475 INF: FPGA: Recv ZSGSRD 30486
17-03-17 21:43:51.098 -07 000000459 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.098 -07 000000459 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:51.098 -07 000000569 INF: FPGA: Recv ZPIEZORD 26539
17-03-17 21:43:51.108 -07 000000459 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.108 -07 000000459 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.4 V, since DAC is at 4.538 V. Piezo Error = -8.7 V.
17-03-17 21:43:51.108 -07 000000459 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.1 um, Read 10 ADC samples: Avg = 30481 (-135.3 uncal um), Error = 0.8 uncal um, Median = 30481 (-135.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30470 (-135.3 uncal um), Max = 30486 (-135.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:43:51.108 -07 000000459 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30481, posNoise = 5, negNoise = 11
17-03-17 21:43:51.108 -07 000000459 INF: Z Motor: After move to -0.136132, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:51.108 -07 000000459 INF: Z Motor: Settle wait time = 1447 ms, measure time = 130 ms (allowed 150 ms), total time = 1577 ms
17-03-17 21:43:51.108 -07 000000459 INF: Z Motor: Waiting extra 20 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:51.128 -07 000000459 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-17 21:43:51.128 -07 000000459 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:51.128 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:51.128 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:51.128 -07 000000458 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:51.128 -07 000000012 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:51.128 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:43:51.128 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:51.128 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:51.128 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:43:51.138 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 21:43:51.138 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:43:51.148 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 21:43:51.148 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 21:43:51.148 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:43:51.198 -07 000000424 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:43:51.388 -07 000000476 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:43:51.398 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:43:51.398 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:43:51.398 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 21:43:51.428 -07 000000480 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:43:51.438 -07 000000459 INF: FPGA: Recv CAMSNAP
17-03-17 21:43:51.438 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 284 ms overall
17-03-17 21:43:51.518 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:43:51.518 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:51.518 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:43:51.518 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:43:51.538 -07 000000476 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:43:51.538 -07 000000429 INF: Autofocus start
17-03-17 21:43:51.538 -07 000000429 INF: MeasureProfile start
17-03-17 21:43:51.538 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:43:51.548 -07 000000476 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 21:43:51.548 -07 000000476 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:43:51.548 -07 000000429 INF: MeasureProfile done
17-03-17 21:43:51.548 -07 000000429 INF: X=-16  Z correction [um]=-0.08128808
17-03-17 21:43:51.548 -07 000000429 INF: Autofocus finished
17-03-17 21:43:51.748 -07 000000431 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:43:51.748 -07 000000476 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:43:51.748 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.136139762304151. ----------
17-03-17 21:43:51.748 -07 000000610 INF: Cycle	54	Tile	15	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:51.758 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28232, sync = True, waitForSettling = True)
17-03-17 21:43:51.758 -07 000000610 INF: Z Motor: Moving to -0.129238 mm, started at -0.136140 mm, distance = 6.90 um
17-03-17 21:43:51.758 -07 000000610 INF: FPGA: Xmit ZDACW 28232\n [Z Motor]
17-03-17 21:43:51.758 -07 000000512 INF: FPGA: Recv ZDACW
17-03-17 21:43:51.768 -07 000000610 INF: FPGA: 'ZDACW 28232' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:43:51.768 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:51.768 -07 000000459 INF: FPGA: Recv ZDACR 28232
17-03-17 21:43:51.778 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.778 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:51.908 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:51.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:51.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.928 -07 000000458 INF: FPGA: Recv ZSGSRD 29409
17-03-17 21:43:51.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.938 -07 000000459 INF: FPGA: Recv ZSGSRD 29411
17-03-17 21:43:51.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.948 -07 000000438 INF: FPGA: Recv ZSGSRD 29409
17-03-17 21:43:51.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.958 -07 000000608 INF: FPGA: Recv ZSGSRD 29406
17-03-17 21:43:51.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.968 -07 000000476 INF: FPGA: Recv ZSGSRD 29402
17-03-17 21:43:51.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.978 -07 000000480 INF: FPGA: Recv ZSGSRD 29411
17-03-17 21:43:51.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.988 -07 000000382 INF: FPGA: Recv ZSGSRD 29408
17-03-17 21:43:51.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:51.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:51.998 -07 000000424 INF: FPGA: Recv ZSGSRD 29406
17-03-17 21:43:52.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:52.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:52.008 -07 000000429 INF: FPGA: Recv ZSGSRD 29409
17-03-17 21:43:52.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:52.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:52.018 -07 000000569 INF: FPGA: Recv ZSGSRD 29407
17-03-17 21:43:52.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:52.028 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:52.028 -07 000000438 INF: FPGA: Recv ZPIEZORD 25161
17-03-17 21:43:52.038 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:52.038 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.308 V. Piezo Error = -9.3 V.
17-03-17 21:43:52.038 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.2 um, Read 10 ADC samples: Avg = 29408 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29408 (-128.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29402 (-128.4 uncal um), Max = 29411 (-128.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 21:43:52.038 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29408, posNoise = 3, negNoise = 6
17-03-17 21:43:52.038 -07 000000610 INF: Z Motor: After move to -0.129238, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:52.038 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:43:52.038 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:52.038 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:52.038 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:52.038 -07 000000459 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:52.038 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:52.038 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:52.038 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:52.038 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:52.038 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:52.038 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:52.038 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:52.038 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:52.038 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 21:43:52.038 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:52.048 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:43:52.048 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:52.048 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 21:43:52.048 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 21:43:52.058 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 21:43:52.058 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 21:43:52.058 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28409 150\n [Camera]
17-03-17 21:43:52.258 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:52.698 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:52.698 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:52.698 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:52.698 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:52.698 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 21:43:52.698 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:52.698 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:52.698 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:52.698 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:52.698 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:43:52.888 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28409 822
17-03-17 21:43:53.038 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:53.078 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 21:43:53.078 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 21:43:53.078 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:53.078 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 21:43:53.078 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 21:43:53.078 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:53.088 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 21:43:53.088 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:43:53.088 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 21:43:53.118 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-17 21:43:53.248 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:53.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:53.248 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:53.248 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:53.248 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:53.248 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:53.248 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:43:53.248 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:53.248 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:53.248 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 21:43:53.438 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:53.438 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:53.438 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28409 150' command took 2 ms to send, 1376 ms to get response, and 1381 ms overall
17-03-17 21:43:53.438 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.129512
17-03-17 21:43:53.438 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12951 mm
17-03-17 21:43:53.438 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:53.448 -07 000000438 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 21:43:53.448 -07 000000438 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-17 21:43:53.448 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:53.448 -07 000000475 INF: Z Motor: Entering MoveAbsStepped (DAC = 28292, sync = True, waitForSettling = False)
17-03-17 21:43:53.448 -07 000000475 INF: Z Motor: Moving to -0.129512 mm, started at -0.129247 mm, distance = -0.27 um
17-03-17 21:43:53.448 -07 000000608 INF: FPGA: Recv YRDPOS 146471
17-03-17 21:43:53.458 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:43:53.458 -07 000000438 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:53.458 -07 000000438 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:53.458 -07 000000438 INF: Y Motor: Moving 1350 steps-28
17-03-17 21:43:53.458 -07 000000475 INF: FPGA: Xmit ZDACW 28292\n [Z Motor]
17-03-17 21:43:53.458 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:43:53.468 -07 000000475 INF: FPGA: 'ZDACW 28292' command took 1 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 21:43:53.468 -07 000000475 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:53.468 -07 000000458 INF: FPGA: Recv ZDACR 28292
17-03-17 21:43:53.478 -07 000000475 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:53.478 -07 000000475 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-17 21:43:53.478 -07 000000438 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:53.628 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 21:43:53.628 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 21:43:53.628 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:53.638 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 21:43:53.638 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 21:43:53.638 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:53.638 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:53.638 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:43:53.638 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 21:43:53.648 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:43:53.848 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 21:43:53.848 -07 000000438 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 21:43:53.888 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:53.888 -07 000000475 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:43:53.898 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 21:43:53.898 -07 000000438 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:53.898 -07 000000438 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-17 21:43:53.898 -07 000000438 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.120 mm/sec
17-03-17 21:43:54.848 -07 000000438 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:54.848 -07 000000429 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:43:54.858 -07 000000438 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:54.858 -07 000000438 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:54.878 -07 000000438 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:54.878 -07 000000438 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:54.878 -07 000000438 INF: Y Motor: Moved to 72.3496 after 1430 ms (table move)
17-03-17 21:43:54.878 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129512 mm (DAC = 28292)
17-03-17 21:43:54.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.888 -07 000000459 INF: FPGA: Recv ZSGSRD 29450
17-03-17 21:43:54.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:54.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.888 -07 000000626 INF: FPGA: Recv ZSGSRD 29448
17-03-17 21:43:54.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.898 -07 000000431 INF: FPGA: Recv ZSGSRD 29447
17-03-17 21:43:54.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.908 -07 000000429 INF: FPGA: Recv ZSGSRD 29447
17-03-17 21:43:54.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.918 -07 000000569 INF: FPGA: Recv ZSGSRD 29445
17-03-17 21:43:54.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.928 -07 000000576 INF: FPGA: Recv ZSGSRD 29448
17-03-17 21:43:54.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.938 -07 000000476 INF: FPGA: Recv ZSGSRD 29451
17-03-17 21:43:54.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.948 -07 000000458 INF: FPGA: Recv ZSGSRD 29456
17-03-17 21:43:54.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.958 -07 000000501 INF: FPGA: Recv ZSGSRD 29449
17-03-17 21:43:54.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:54.968 -07 000000480 INF: FPGA: Recv ZSGSRD 29444
17-03-17 21:43:54.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.978 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:54.978 -07 000000012 INF: FPGA: Recv ZPIEZORD 25217
17-03-17 21:43:54.988 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:54.988 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.317 V. Piezo Error = -9.3 V.
17-03-17 21:43:54.988 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29448 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29448 (-128.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29444 (-128.7 uncal um), Max = 29456 (-128.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:43:54.988 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29448, posNoise = 8, negNoise = 4
17-03-17 21:43:54.988 -07 000000610 INF: Z Motor: After move to -0.129512, error = 0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:54.988 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 104 ms (allowed 150 ms), total time = 1535 ms
17-03-17 21:43:54.988 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:55.038 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-17 21:43:55.038 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:55.038 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.129503551161712. ----------
17-03-17 21:43:55.038 -07 000000610 INF: Cycle	54	Tile	16	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:55.038 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28115, sync = True, waitForSettling = True)
17-03-17 21:43:55.038 -07 000000610 INF: Z Motor: Moving to -0.128702 mm, started at -0.129504 mm, distance = 0.80 um
17-03-17 21:43:55.038 -07 000000610 INF: FPGA: Xmit ZDACW 28115\n [Z Motor]
17-03-17 21:43:55.038 -07 000000476 INF: FPGA: Recv ZDACW
17-03-17 21:43:55.048 -07 000000610 INF: FPGA: 'ZDACW 28115' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:55.048 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:55.048 -07 000000608 INF: FPGA: Recv ZDACR 28115
17-03-17 21:43:55.058 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.058 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:55.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.208 -07 000000547 INF: FPGA: Recv ZSGSRD 29328
17-03-17 21:43:55.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:55.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.218 -07 000000626 INF: FPGA: Recv ZSGSRD 29314
17-03-17 21:43:55.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.228 -07 000000501 INF: FPGA: Recv ZSGSRD 29328
17-03-17 21:43:55.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.238 -07 000000458 INF: FPGA: Recv ZSGSRD 29331
17-03-17 21:43:55.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.248 -07 000000012 INF: FPGA: Recv ZSGSRD 29334
17-03-17 21:43:55.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.258 -07 000000512 INF: FPGA: Recv ZSGSRD 29324
17-03-17 21:43:55.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.268 -07 000000480 INF: FPGA: Recv ZSGSRD 29322
17-03-17 21:43:55.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.278 -07 000000576 INF: FPGA: Recv ZSGSRD 29324
17-03-17 21:43:55.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.288 -07 000000382 INF: FPGA: Recv ZSGSRD 29322
17-03-17 21:43:55.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:55.298 -07 000000012 INF: FPGA: Recv ZSGSRD 29326
17-03-17 21:43:55.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.308 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:55.308 -07 000000459 INF: FPGA: Recv ZPIEZORD 25067
17-03-17 21:43:55.318 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:55.318 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.290 V. Piezo Error = -9.4 V.
17-03-17 21:43:55.318 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29325 (-127.9 uncal um), Error = 0.8 uncal um, Median = 29325 (-127.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 29314 (-127.9 uncal um), Max = 29334 (-128.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-17 21:43:55.318 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29325, posNoise = 9, negNoise = 11
17-03-17 21:43:55.318 -07 000000610 INF: Z Motor: After move to -0.128702, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:55.318 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 21:43:55.318 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:55.318 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:55.318 -07 000000012 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:55.318 -07 000000431 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:55.318 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:55.318 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:55.318 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:55.318 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:55.318 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:55.318 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:55.318 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:55.318 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:55.328 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:55.328 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:55.328 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:43:55.328 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:55.338 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:43:55.338 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:43:55.338 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 21:43:55.338 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:43:55.348 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28292 150\n [Camera]
17-03-17 21:43:55.548 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:55.978 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:55.978 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:55.978 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:55.978 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:55.978 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 21:43:55.988 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:55.988 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:55.988 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:55.988 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:55.988 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 21:43:56.178 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28292 822
17-03-17 21:43:56.328 -07 000000476 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:56.338 -07 000000476 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.001704,
17-03-17 21:43:56.358 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:43:56.358 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:43:56.358 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:56.358 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:43:56.358 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 21:43:56.358 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:56.368 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:56.368 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:43:56.368 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:56.378 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 21:43:56.538 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:56.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:56.538 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:56.658 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:56.658 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:56.658 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:56.658 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:56.658 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:56.668 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:56.668 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:43:56.728 -07 000000459 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:56.728 -07 000000431 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:56.728 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28292 150' command took 2 ms to send, 1372 ms to get response, and 1381 ms overall
17-03-17 21:43:56.728 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.129296
17-03-17 21:43:56.728 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12930 mm
17-03-17 21:43:56.728 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:56.728 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 21:43:56.728 -07 000000424 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-17 21:43:56.728 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:56.728 -07 000000475 INF: Z Motor: Entering MoveAbsStepped (DAC = 28245, sync = True, waitForSettling = False)
17-03-17 21:43:56.728 -07 000000475 INF: Z Motor: Moving to -0.129297 mm, started at -0.128713 mm, distance = -0.58 um
17-03-17 21:43:56.738 -07 000000475 INF: FPGA: Xmit ZDACW 28245\n [Z Motor]
17-03-17 21:43:56.738 -07 000000627 INF: FPGA: Recv YRDPOS 148172
17-03-17 21:43:56.738 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 21:43:56.738 -07 000000424 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:56.738 -07 000000424 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:43:56.738 -07 000000424 INF: Y Motor: Moving 1349 steps-27
17-03-17 21:43:56.738 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:43:56.748 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:43:56.748 -07 000000475 INF: FPGA: 'ZDACW 28245' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:43:56.758 -07 000000475 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:56.758 -07 000000547 INF: FPGA: Recv ZDACR 28245
17-03-17 21:43:56.768 -07 000000475 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:43:56.768 -07 000000475 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-17 21:43:56.908 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:43:56.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:43:57.048 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 385 ms.
17-03-17 21:43:57.048 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-17 21:43:57.048 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:57.048 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 21:43:57.048 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:43:57.048 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:57.058 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:57.058 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:57.058 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-17 21:43:57.058 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 21:43:57.118 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 21:43:57.118 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-17 21:43:57.168 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:57.168 -07 000000547 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:43:57.178 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:57.178 -07 000000424 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:57.178 -07 000000424 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 21:43:57.178 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.843 mm, average velocity = 2.184 mm/sec
17-03-17 21:43:58.128 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:58.128 -07 000000012 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:43:58.138 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:58.138 -07 000000424 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:43:58.158 -07 000000424 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:43:58.158 -07 000000424 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:43:58.158 -07 000000424 INF: Y Motor: Moved to 73.1763 after 1425 ms (table move)
17-03-17 21:43:58.158 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129297 mm (DAC = 28245)
17-03-17 21:43:58.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.158 -07 000000501 INF: FPGA: Recv ZSGSRD 29411
17-03-17 21:43:58.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 21:43:58.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.168 -07 000000429 INF: FPGA: Recv ZSGSRD 29415
17-03-17 21:43:58.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.178 -07 000000382 INF: FPGA: Recv ZSGSRD 29412
17-03-17 21:43:58.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.188 -07 000000458 INF: FPGA: Recv ZSGSRD 29422
17-03-17 21:43:58.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.198 -07 000000459 INF: FPGA: Recv ZSGSRD 29424
17-03-17 21:43:58.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.208 -07 000000438 INF: FPGA: Recv ZSGSRD 29416
17-03-17 21:43:58.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.218 -07 000000626 INF: FPGA: Recv ZSGSRD 29417
17-03-17 21:43:58.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.228 -07 000000576 INF: FPGA: Recv ZSGSRD 29413
17-03-17 21:43:58.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.238 -07 000000480 INF: FPGA: Recv ZSGSRD 29413
17-03-17 21:43:58.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.248 -07 000000431 INF: FPGA: Recv ZSGSRD 29414
17-03-17 21:43:58.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:58.258 -07 000000501 INF: FPGA: Recv ZPIEZORD 25185
17-03-17 21:43:58.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.268 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.310 V. Piezo Error = -9.3 V.
17-03-17 21:43:58.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29416 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29414 (-128.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29411 (-128.5 uncal um), Max = 29424 (-128.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:43:58.268 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29416, posNoise = 8, negNoise = 5
17-03-17 21:43:58.268 -07 000000610 INF: Z Motor: After move to -0.129297, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:58.268 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 110 ms (allowed 150 ms), total time = 1538 ms
17-03-17 21:43:58.268 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:43:58.308 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms
17-03-17 21:43:58.308 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:43:58.308 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.129297976373175. ----------
17-03-17 21:43:58.308 -07 000000610 INF: Cycle	54	Tile	17	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:43:58.308 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28068, sync = True, waitForSettling = True)
17-03-17 21:43:58.308 -07 000000610 INF: Z Motor: Moving to -0.128487 mm, started at -0.129298 mm, distance = 0.81 um
17-03-17 21:43:58.308 -07 000000610 INF: FPGA: Xmit ZDACW 28068\n [Z Motor]
17-03-17 21:43:58.308 -07 000000459 INF: FPGA: Recv ZDACW
17-03-17 21:43:58.318 -07 000000610 INF: FPGA: 'ZDACW 28068' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:43:58.318 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:43:58.318 -07 000000438 INF: FPGA: Recv ZDACR 28068
17-03-17 21:43:58.328 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.328 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:43:58.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.478 -07 000000458 INF: FPGA: Recv ZSGSRD 29290
17-03-17 21:43:58.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:43:58.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.488 -07 000000626 INF: FPGA: Recv ZSGSRD 29291
17-03-17 21:43:58.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.498 -07 000000012 INF: FPGA: Recv ZSGSRD 29291
17-03-17 21:43:58.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.508 -07 000000547 INF: FPGA: Recv ZSGSRD 29297
17-03-17 21:43:58.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.518 -07 000000476 INF: FPGA: Recv ZSGSRD 29296
17-03-17 21:43:58.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.528 -07 000000569 INF: FPGA: Recv ZSGSRD 29293
17-03-17 21:43:58.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.538 -07 000000512 INF: FPGA: Recv ZSGSRD 29287
17-03-17 21:43:58.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.548 -07 000000415 INF: FPGA: Recv ZSGSRD 29286
17-03-17 21:43:58.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.558 -07 000000459 INF: FPGA: Recv ZSGSRD 29292
17-03-17 21:43:58.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:43:58.568 -07 000000576 INF: FPGA: Recv ZSGSRD 29291
17-03-17 21:43:58.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.578 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:43:58.578 -07 000000608 INF: FPGA: Recv ZPIEZORD 25031
17-03-17 21:43:58.588 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:43:58.588 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.283 V. Piezo Error = -9.4 V.
17-03-17 21:43:58.588 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29291 (-127.7 uncal um), Error = 0.8 uncal um, Median = 29291 (-127.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29286 (-127.7 uncal um), Max = 29297 (-127.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:43:58.588 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29291, posNoise = 6, negNoise = 5
17-03-17 21:43:58.588 -07 000000610 INF: Z Motor: After move to -0.128487, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:43:58.588 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 21:43:58.588 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:43:58.588 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:43:58.588 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:43:58.588 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:43:58.588 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:43:58.588 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:43:58.588 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:43:58.588 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:43:58.588 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:43:58.588 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:43:58.588 -07 000000431 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:43:58.588 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:43:58.588 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:43:58.598 -07 000000431 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 21:43:58.598 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:43:58.598 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:43:58.608 -07 000000431 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:43:58.608 -07 000000431 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:43:58.608 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:43:58.608 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 21:43:58.608 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28245 150\n [Camera]
17-03-17 21:43:58.818 -07 000000012 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:43:59.248 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:43:59.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:43:59.258 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:59.258 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:59.258 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:43:59.258 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:43:59.258 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:43:59.258 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:59.258 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:59.258 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:43:59.448 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28245 822
17-03-17 21:43:59.598 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:43:59.628 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 21:43:59.628 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 21:43:59.628 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:59.628 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 21:43:59.628 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 21:43:59.628 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:43:59.638 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:59.638 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 21:43:59.638 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:43:59.648 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 21:43:59.808 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:43:59.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:43:59.808 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:43:59.918 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:43:59.918 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:43:59.918 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:43:59.918 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:43:59.918 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:43:59.918 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:43:59.918 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-17 21:43:59.998 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:43:59.998 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:43:59.998 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28245 150' command took 2 ms to send, 1373 ms to get response, and 1383 ms overall
17-03-17 21:43:59.998 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128779
17-03-17 21:43:59.998 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12878 mm
17-03-17 21:43:59.998 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:43:59.998 -07 000000415 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 21:43:59.998 -07 000000415 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-17 21:43:59.998 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:43:59.998 -07 000000012 INF: Z Motor: Entering MoveAbsStepped (DAC = 28132, sync = True, waitForSettling = False)
17-03-17 21:43:59.998 -07 000000012 INF: Z Motor: Moving to -0.128780 mm, started at -0.128495 mm, distance = -0.29 um
17-03-17 21:44:00.008 -07 000000012 INF: FPGA: Xmit ZDACW 28132\n [Z Motor]
17-03-17 21:44:00.008 -07 000000512 INF: FPGA: Recv YRDPOS 149865
17-03-17 21:44:00.008 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 21:44:00.008 -07 000000415 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:44:00.008 -07 000000415 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:44:00.008 -07 000000415 INF: Y Motor: Moving 1354 steps-33
17-03-17 21:44:00.008 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 21:44:00.018 -07 000000012 INF: FPGA: 'ZDACW 28132' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:44:00.018 -07 000000415 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:44:00.028 -07 000000012 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:44:00.028 -07 000000424 INF: FPGA: Recv ZDACR 28132
17-03-17 21:44:00.038 -07 000000012 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:44:00.038 -07 000000012 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-17 21:44:00.298 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:44:00.298 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:44:00.298 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:00.308 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:44:00.308 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:44:00.308 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:00.308 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:44:00.308 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:44:00.308 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 502 ms.
17-03-17 21:44:00.308 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 21:44:00.388 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-17 21:44:00.388 -07 000000415 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-17 21:44:00.428 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:44:00.428 -07 000000476 INF: FPGA: Recv YRDPOS 151568
17-03-17 21:44:00.438 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:44:00.438 -07 000000415 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:44:00.438 -07 000000415 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 21:44:00.438 -07 000000415 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.846 mm, average velocity = 2.193 mm/sec
17-03-17 21:44:01.388 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:44:01.388 -07 000000547 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:44:01.398 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:44:01.398 -07 000000415 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:44:01.408 -07 000000415 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:44:01.408 -07 000000415 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 21:44:01.408 -07 000000415 INF: Y Motor: Moved to 74.0083 after 1409 ms (table move)
17-03-17 21:44:01.418 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128780 mm (DAC = 28132)
17-03-17 21:44:01.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.418 -07 000000501 INF: FPGA: Recv ZSGSRD 29336
17-03-17 21:44:01.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.428 -07 000000475 INF: FPGA: Recv ZSGSRD 29340
17-03-17 21:44:01.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.438 -07 000000576 INF: FPGA: Recv ZSGSRD 29340
17-03-17 21:44:01.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.448 -07 000000480 INF: FPGA: Recv ZSGSRD 29337
17-03-17 21:44:01.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.458 -07 000000608 INF: FPGA: Recv ZSGSRD 29342
17-03-17 21:44:01.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.468 -07 000000501 INF: FPGA: Recv ZSGSRD 29337
17-03-17 21:44:01.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.478 -07 000000512 INF: FPGA: Recv ZSGSRD 29338
17-03-17 21:44:01.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.488 -07 000000626 INF: FPGA: Recv ZSGSRD 29330
17-03-17 21:44:01.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.498 -07 000000547 INF: FPGA: Recv ZSGSRD 29336
17-03-17 21:44:01.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.508 -07 000000476 INF: FPGA: Recv ZSGSRD 29336
17-03-17 21:44:01.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.518 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:44:01.518 -07 000000424 INF: FPGA: Recv ZPIEZORD 25085
17-03-17 21:44:01.528 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.528 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.3 V.
17-03-17 21:44:01.528 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29337 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29337 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29330 (-128.0 uncal um), Max = 29342 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 21:44:01.528 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29337, posNoise = 5, negNoise = 7
17-03-17 21:44:01.528 -07 000000610 INF: Z Motor: After move to -0.128780, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:44:01.528 -07 000000610 INF: Z Motor: Settle wait time = 1411 ms, measure time = 111 ms (allowed 150 ms), total time = 1522 ms
17-03-17 21:44:01.528 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 21:44:01.568 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1564 ms
17-03-17 21:44:01.568 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:44:01.568 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128790463613976. ----------
17-03-17 21:44:01.568 -07 000000610 INF: Cycle	54	Tile	18	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:44:01.568 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27955, sync = True, waitForSettling = True)
17-03-17 21:44:01.568 -07 000000610 INF: Z Motor: Moving to -0.127970 mm, started at -0.128790 mm, distance = 0.82 um
17-03-17 21:44:01.568 -07 000000610 INF: FPGA: Xmit ZDACW 27955\n [Z Motor]
17-03-17 21:44:01.578 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:44:01.578 -07 000000610 INF: FPGA: 'ZDACW 27955' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:44:01.578 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:44:01.578 -07 000000382 INF: FPGA: Recv ZDACR 27955
17-03-17 21:44:01.588 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.588 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:44:01.698 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.019446,
17-03-17 21:44:01.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.738 -07 000000512 INF: FPGA: Recv ZSGSRD 29210
17-03-17 21:44:01.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.748 -07 000000576 INF: FPGA: Recv ZSGSRD 29211
17-03-17 21:44:01.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.768 -07 000000459 INF: FPGA: Recv ZSGSRD 29212
17-03-17 21:44:01.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 21:44:01.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.778 -07 000000501 INF: FPGA: Recv ZSGSRD 29210
17-03-17 21:44:01.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.788 -07 000000475 INF: FPGA: Recv ZSGSRD 29214
17-03-17 21:44:01.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.798 -07 000000476 INF: FPGA: Recv ZSGSRD 29205
17-03-17 21:44:01.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.808 -07 000000429 INF: FPGA: Recv ZSGSRD 29208
17-03-17 21:44:01.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.818 -07 000000459 INF: FPGA: Recv ZSGSRD 29210
17-03-17 21:44:01.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.828 -07 000000458 INF: FPGA: Recv ZSGSRD 29209
17-03-17 21:44:01.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:01.838 -07 000000438 INF: FPGA: Recv ZSGSRD 29214
17-03-17 21:44:01.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.848 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:44:01.848 -07 000000431 INF: FPGA: Recv ZPIEZORD 24904
17-03-17 21:44:01.858 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:01.858 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.266 V. Piezo Error = -9.5 V.
17-03-17 21:44:01.858 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.0 um, Read 10 ADC samples: Avg = 29210 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29210 (-127.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29205 (-127.2 uncal um), Max = 29214 (-127.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 21:44:01.858 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29210, posNoise = 4, negNoise = 5
17-03-17 21:44:01.858 -07 000000610 INF: Z Motor: After move to -0.127970, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:44:01.858 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-17 21:44:01.858 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:44:01.858 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:44:01.858 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:44:01.858 -07 000000459 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:44:01.858 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:44:01.858 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:44:01.858 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:44:01.858 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:44:01.858 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 21:44:01.858 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:44:01.858 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:44:01.858 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:44:01.858 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:44:01.858 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:44:01.868 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 21:44:01.868 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:44:01.878 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 21:44:01.878 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:44:01.878 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 21:44:01.878 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 21:44:01.878 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28132 150\n [Camera]
17-03-17 21:44:01.908 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:44:01.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:44:02.078 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:44:02.518 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:44:02.518 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:44:02.518 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:44:02.518 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:44:02.518 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 21:44:02.528 -07 000000458 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:44:02.528 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:44:02.528 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:44:02.528 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:44:02.528 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 21:44:02.708 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28132 822
17-03-17 21:44:02.858 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:44:02.918 -07 000000431 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 21:44:02.918 -07 000000431 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 21:44:02.918 -07 000000431 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:02.918 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 391 ms.
17-03-17 21:44:02.918 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:44:02.918 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:02.918 -07 000000431 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:44:02.918 -07 000000431 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 21:44:02.918 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:44:02.928 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 21:44:03.078 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1182
17-03-17 21:44:03.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1182
17-03-17 21:44:03.078 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:44:03.078 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:44:03.078 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 21:44:03.078 -07 000000431 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1182
17-03-17 21:44:03.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1182
17-03-17 21:44:03.078 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:44:03.078 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:44:03.078 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 21:44:03.258 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:44:03.258 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:44:03.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28132 150' command took 2 ms to send, 1369 ms to get response, and 1381 ms overall
17-03-17 21:44:03.268 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 21:44:03.268 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.00830078125, Z-Position -0.127974588671973. ------
17-03-17 21:44:03.268 -07 000000459 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:44:03.268 -07 000000627 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13440 mm
17-03-17 21:44:03.268 -07 000000627 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 21:44:03.268 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 21:44:03.268 -07 000000429 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-17 21:44:03.268 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 29360, sync = True, waitForSettling = False)
17-03-17 21:44:03.268 -07 000000512 INF: Z Motor: Moving to -0.134401 mm, started at -0.127975 mm, distance = -6.43 um
17-03-17 21:44:03.278 -07 000000438 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:44:03.278 -07 000000512 INF: FPGA: Xmit ZDACW 29360\n [Z Motor]
17-03-17 21:44:03.278 -07 000000459 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 21:44:03.278 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 21:44:03.288 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:44:03.288 -07 000000512 INF: FPGA: 'ZDACW 29360' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 21:44:03.288 -07 000000576 INF: FPGA: Recv YRDPOS 151569
17-03-17 21:44:03.298 -07 000000459 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 21:44:03.298 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 21 ms overall
17-03-17 21:44:03.298 -07 000000429 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:44:03.298 -07 000000429 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 21:44:03.298 -07 000000429 INF: Y Motor: Moving 1351 steps-30
17-03-17 21:44:03.308 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:44:03.308 -07 000000569 INF: FPGA: Recv ZDACR 29360
17-03-17 21:44:03.318 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 21:44:03.318 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 21:44:03.318 -07 000000512 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-17 21:44:03.458 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 21:44:03.458 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 21:44:03.458 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:03.458 -07 000000012 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 21:44:03.458 -07 000000012 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:44:03.458 -07 000000012 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:03.468 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 21:44:03.468 -07 000000012 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:44:03.468 -07 000000012 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:44:03.468 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 21:44:03.498 -07 000000382 INF: FPGA: Recv FOCMRRFOC
17-03-17 21:44:03.498 -07 000000459 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-17 21:44:03.688 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-17 21:44:03.688 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 21:44:03.718 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:44:03.718 -07 000000501 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:44:03.728 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 21:44:03.728 -07 000000429 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:44:03.728 -07 000000429 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-17 21:44:03.728 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.844 mm, average velocity = 2.137 mm/sec
17-03-17 21:44:04.678 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 21:44:04.678 -07 000000547 INF: FPGA: Recv YRDPOS 153256
17-03-17 21:44:04.688 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.688 -07 000000429 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 21:44:04.698 -07 000000429 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 21:44:04.698 -07 000000429 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 21:44:04.698 -07 000000429 INF: Y Motor: Moved to 74.8320 after 1428 ms (table move)
17-03-17 21:44:04.708 -07 000000627 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134401 mm (DAC = 29360)
17-03-17 21:44:04.708 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.708 -07 000000458 INF: FPGA: Recv ZSGSRD 30218
17-03-17 21:44:04.718 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.718 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.718 -07 000000382 INF: FPGA: Recv ZSGSRD 30203
17-03-17 21:44:04.728 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.728 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.728 -07 000000429 INF: FPGA: Recv ZSGSRD 30205
17-03-17 21:44:04.738 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.738 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.738 -07 000000569 INF: FPGA: Recv ZSGSRD 30210
17-03-17 21:44:04.748 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.748 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.748 -07 000000415 INF: FPGA: Recv ZSGSRD 30213
17-03-17 21:44:04.758 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.758 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.758 -07 000000424 INF: FPGA: Recv ZSGSRD 30212
17-03-17 21:44:04.768 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.768 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.768 -07 000000459 INF: FPGA: Recv ZSGSRD 30217
17-03-17 21:44:04.778 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.778 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.778 -07 000000438 INF: FPGA: Recv ZSGSRD 30216
17-03-17 21:44:04.788 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.788 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.788 -07 000000547 INF: FPGA: Recv ZSGSRD 30210
17-03-17 21:44:04.798 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.798 -07 000000627 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:04.798 -07 000000608 INF: FPGA: Recv ZSGSRD 30204
17-03-17 21:44:04.808 -07 000000627 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.808 -07 000000627 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:44:04.808 -07 000000576 INF: FPGA: Recv ZPIEZORD 26223
17-03-17 21:44:04.818 -07 000000627 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:04.818 -07 000000627 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 44.8 V, since DAC is at 4.480 V. Piezo Error = -8.8 V.
17-03-17 21:44:04.818 -07 000000627 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.4 um, Read 10 ADC samples: Avg = 30211 (-133.6 uncal um), Error = 0.8 uncal um, Median = 30211 (-133.6 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30203 (-133.6 uncal um), Max = 30218 (-133.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 21:44:04.818 -07 000000627 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30211, posNoise = 7, negNoise = 8
17-03-17 21:44:04.818 -07 000000627 INF: Z Motor: After move to -0.134401, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:44:04.818 -07 000000627 INF: Z Motor: Settle wait time = 1431 ms, measure time = 110 ms (allowed 150 ms), total time = 1541 ms
17-03-17 21:44:04.818 -07 000000627 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 21:44:04.858 -07 000000627 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 21:44:04.858 -07 000000627 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 21:44:04.858 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:44:04.858 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:44:04.858 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:44:04.858 -07 000000438 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:44:04.858 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 21:44:04.858 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:44:04.858 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 21:44:04.858 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 21:44:04.868 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-17 21:44:04.868 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 21:44:04.878 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 21:44:04.878 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 21:44:04.878 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 21:44:04.928 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 21:44:05.118 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 21:44:05.118 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 21:44:05.128 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 21:44:05.128 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start.
17-03-17 21:44:05.158 -07 000000512 INF: FPGA: Recv @CAMSNAP 280
17-03-17 21:44:05.158 -07 000000475 INF: FPGA: Recv CAMSNAP
17-03-17 21:44:05.158 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 21:44:05.248 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 21:44:05.248 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:05.248 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 21:44:05.258 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 21:44:05.358 -07 000000547 INF: Autofocus start
17-03-17 21:44:05.358 -07 000000547 INF: MeasureProfile start
17-03-17 21:44:05.358 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 21:44:05.358 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-17 21:44:05.368 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 21:44:05.368 -07 000000424 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 21:44:05.368 -07 000000547 INF: MeasureProfile done
17-03-17 21:44:05.368 -07 000000547 INF: X=25  Z correction [um]=0.0963114
17-03-17 21:44:05.368 -07 000000547 INF: Autofocus finished
17-03-17 21:44:05.568 -07 000000431 INF: FPGA: Recv FOCMRRIMG
17-03-17 21:44:05.568 -07 000000424 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 21:44:05.568 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.134405225025875. ----------
17-03-17 21:44:05.568 -07 000000610 INF: Cycle	54	Tile	19	Exposure Settings		A	437	G	210	T	210	C	437
17-03-17 21:44:05.578 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27894, sync = True, waitForSettling = True)
17-03-17 21:44:05.578 -07 000000610 INF: Z Motor: Moving to -0.127691 mm, started at -0.134405 mm, distance = 6.71 um
17-03-17 21:44:05.578 -07 000000610 INF: FPGA: Xmit ZDACW 27894\n [Z Motor]
17-03-17 21:44:05.578 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 21:44:05.588 -07 000000610 INF: FPGA: 'ZDACW 27894' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 21:44:05.588 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 21:44:05.588 -07 000000012 INF: FPGA: Recv ZDACR 27894
17-03-17 21:44:05.598 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.598 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 21:44:05.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.748 -07 000000415 INF: FPGA: Recv ZSGSRD 29171
17-03-17 21:44:05.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 21:44:05.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.758 -07 000000626 INF: FPGA: Recv ZSGSRD 29168
17-03-17 21:44:05.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.768 -07 000000512 INF: FPGA: Recv ZSGSRD 29163
17-03-17 21:44:05.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.778 -07 000000480 INF: FPGA: Recv ZSGSRD 29166
17-03-17 21:44:05.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.788 -07 000000012 INF: FPGA: Recv ZSGSRD 29170
17-03-17 21:44:05.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.798 -07 000000382 INF: FPGA: Recv ZSGSRD 29168
17-03-17 21:44:05.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.808 -07 000000569 INF: FPGA: Recv ZSGSRD 29164
17-03-17 21:44:05.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.818 -07 000000476 INF: FPGA: Recv ZSGSRD 29167
17-03-17 21:44:05.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.828 -07 000000459 INF: FPGA: Recv ZSGSRD 29168
17-03-17 21:44:05.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 21:44:05.838 -07 000000438 INF: FPGA: Recv ZSGSRD 29167
17-03-17 21:44:05.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.848 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 21:44:05.848 -07 000000501 INF: FPGA: Recv ZPIEZORD 24863
17-03-17 21:44:05.858 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 21:44:05.858 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.256 V. Piezo Error = -9.4 V.
17-03-17 21:44:05.858 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.7 um, Read 10 ADC samples: Avg = 29167 (-126.9 uncal um), Error = 0.8 uncal um, Median = 29168 (-126.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29163 (-126.9 uncal um), Max = 29171 (-127.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 21:44:05.858 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29167, posNoise = 4, negNoise = 4
17-03-17 21:44:05.858 -07 000000610 INF: Z Motor: After move to -0.127691, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 21:44:05.858 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 21:44:05.858 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 21:44:05.858 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 21:44:05.858 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 21:44:05.858 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 21:44:05.858 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 21:44:05.858 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 21:44:05.858 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 21:44:05.858 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 21:44:05.858 -07 000000438 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms.
17-03-17 21:44:05.858 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 21:44:05.858 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 21:44:05.858 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 21:44:05.868 -07 000000438 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 21:44:05.868 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 21:44:05.868 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 21:44:05.868 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 21:44:05.878 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-17 21:44:05.878 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 21:44:05.878 -07 000000438 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-17 21:44:05.878 -07 000000438 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 21:44:05.878 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 437 437 210 210 28071 150\n [Camera]
17-03-17 21:44:06.078 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 21:44:06.518 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 629
17-03-17 21:44:06.518 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 629
17-03-17 21:44:06.518 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:44:06.518 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:44:06.518 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 21:44:06.518 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 629
17-03-17 21:44:06.518 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 629
17-03-17 21:44:06.528 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:44:06.648 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:44:06.648 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-17 21:44:06.708 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28071 822
17-03-17 21:44:06.858 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 972
17-03-17 21:44:06.898 -07 000000459 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 21:44:06.898 -07 000000459 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 21:44:06.898 -07 000000459 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:06.908 -07 000000459 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:44:06.908 -07 000000459 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 21:44:06.908 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 21:44:06.908 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 53. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=805, R2=832, Total=1637. Warn if over 250 bubbles per interval.
17-03-17 21:44:07.018 -07 000000458 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 21:44:07.018 -07 000000458 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 21:44:07.018 -07 000000458 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:07.028 -07 000000458 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:44:07.028 -07 000000458 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms.
17-03-17 21:44:07.078 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1183
17-03-17 21:44:07.078 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1183
17-03-17 21:44:07.078 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 21:44:07.078 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1183
17-03-17 21:44:07.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1183
17-03-17 21:44:07.078 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 21:44:07.078 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 21:44:07.078 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 21:44:07.088 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.001704,
17-03-17 21:44:07.088 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 21:44:07.088 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 21:44:07.258 -07 000000438 INF: FPGA: Recv @CAMDBLSNAP 1375
17-03-17 21:44:07.258 -07 000000459 INF: FPGA: Recv CAMDBLSNAP
17-03-17 21:44:07.258 -07 000000610 INF: FPGA: 'CAMDBLSNAP 437 437 210 210 28071 150' command took 2 ms to send, 1379 ms to get response, and 1382 ms overall
17-03-17 21:44:07.458 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 21:44:07.458 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 21:44:07.458 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:07.458 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 21:44:07.468 -07 000000429 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 378 ms.
17-03-17 21:44:07.468 -07 000000429 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-17 21:44:07.468 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 21:44:07.468 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 21:44:07.468 -07 000000429 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 21:44:07.468 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 21:44:07.468 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 21:44:07.508 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-17 21:44:07.508 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 21:44:07.548 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-17 21:44:07.568 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-17 21:44:07.568 -07 000000610 INF: Imaging Cycle 54: ScanTilesCommand Cycle 54 time end. Duration was 141913 ms.
17-03-17 21:44:07.568 -07 000000610 INF: =================== Cycle #54 ===================
17-03-17 21:44:07.568 -07 000000610 INF: ===================  ===================
17-03-17 21:44:07.568 -07 000000480 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 21:44:07.578 -07 000000512 INF: FPGA: Recv EXLED1ADCR 23
17-03-17 21:44:07.588 -07 000000480 INF: FPGA: 'EXLED1ADCR' command took 2 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 21:44:07.588 -07 000000480 INF: GreenLED: Using Green data: Photodiode ADC 23 --> 0.0 mW (old method), or 1.7 mW (new method). Difference = 1.6 mW
17-03-17 21:44:07.588 -07 000000480 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 54, FrontChillerTemperature: 4.001704, FrontChillerHeatSinkTemperature: 0.369674, AmbientTemperature: 19.07729, FlowCellCompartmentTemperature: 21.9911, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 19.04937, GreenLEDSensorTemperature: 25.52386, PhotodiodePowerAdcGreen: 23, PhotodiodePowerMwGreen: 1.653493
17-03-17 21:44:07.628 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.