17-03-17 22:56:44.238 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:56:44.238 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-17 22:56:44.238 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-17 22:56:44.248 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:56:44.248 -07 000000547 INF: FPGA: Recv YRDPOS 153257
17-03-17 22:56:44.258 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:56:44.258 -07 000000610 INF: Y Motor: Encoder = 153257 = motor step 119732.0 = 74.8325 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:56:44.258 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-17 22:56:44.258 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-17 22:56:44.258 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-17 22:56:44.378 -07 000000415 INF: FPGA: Recv YMVTO 154377 872
17-03-17 22:56:44.378 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 110 ms to get response, and 116 ms overall
17-03-17 22:56:44.378 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm)
17-03-17 22:56:44.378 -07 000000610 INF: Y Motor: To move from 74.833 to 75.381 (0.549 mm) should take 877 steps, but required 872 steps (0.545 mm). Slippage = -0.003 mm (-0.01%).
17-03-17 22:56:44.378 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.549 mm, average velocity = 4.729 mm/sec
17-03-17 22:56:47.018 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:56:47.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1095, R2=1131, Total=2226. Warn if over 250 bubbles per interval.
17-03-17 22:56:47.378 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:56:47.378 -07 000000502 INF: FPGA: Recv YRDPOS 154380
17-03-17 22:56:47.388 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:56:47.388 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:56:47.398 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:56:47.398 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm)
17-03-17 22:56:47.398 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3159 ms
17-03-17 22:56:47.408 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 60° ===================
17-03-17 22:56:47.408 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-17 22:56:47.408 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-17 22:56:47.408 -07 000000502 INF: FPGA: Recv TEC2TEMP 
17-03-17 22:56:47.418 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:56:47.418 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 22:56:47.418 -07 000000475 INF: FPGA: Recv TEC2EN 
17-03-17 22:56:47.428 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:56:47.428 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 60° ===================
17-03-17 22:56:47.428 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:56:47.428 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 22:56:47.428 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:56:47.458 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 22:56:47.458 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-17 22:56:47.458 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 22:56:47.758 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:56:47.778 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 22:56:47.778 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 22:56:47.828 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:56:47.848 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:56:47.848 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:56:47.948 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:56:47.948 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 22:56:47.948 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:47.978 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 22:56:47.978 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 22:56:47.978 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:56:48.108 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 22:56:48.148 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:56:48.698 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.981281,
17-03-17 22:56:51.278 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:51.308 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:56:51.728 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:51.758 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:56:52.018 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-17 22:56:52.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1096, R2=1132, Total=2228. Warn if over 250 bubbles per interval.
17-03-17 22:56:52.178 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:52.208 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:56:52.208 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 22:56:52.208 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:56:52.338 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:52.368 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 22:56:52.368 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 22:56:52.498 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:52.528 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 22:56:52.528 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 22:56:52.528 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:56:52.658 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:56:52.688 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:56:53.118 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:53.148 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:56:53.148 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:56:53.148 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:56:54.068 -07 000000478 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.001704,
17-03-17 22:56:54.368 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-17 22:56:54.368 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-17 22:56:54.368 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:56:54.388 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:56:54.388 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-17 22:56:54.388 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-17 22:56:54.528 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:56:54.548 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-17 22:56:54.548 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-17 22:56:54.598 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:56:54.618 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 22:56:54.618 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:56:54.718 -07 000000610 INF: =================== Cycle #70, Pumping Reagent CMS (4) ===================
17-03-17 22:56:54.718 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 22:56:54.718 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:54.748 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 22:56:54.748 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 22:56:54.748 -07 000000610 INF: =================== Cycle #70, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-17 22:56:54.878 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 22:56:54.918 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:56:56.358 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:56.388 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:56:56.808 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:56.838 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:56:56.838 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 22:56:56.838 -07 000000610 INF: =================== Cycle #70, Pumping Reagent CMS (4) ===================
17-03-17 22:56:56.968 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:56.998 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 22:56:56.998 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 22:56:57.018 -07 000000486 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 2
17-03-17 22:56:57.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=2, R2=0, Total=2. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1098, R2=1132, Total=2230. Warn if over 250 bubbles per interval.
17-03-17 22:56:57.128 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:57.158 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 22:56:57.158 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 22:56:57.158 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:56:57.288 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:56:57.318 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:56:57.748 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:56:57.778 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:56:57.778 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:56:57.778 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:56:58.998 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 22:56:58.998 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 22:56:58.998 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:56:59.018 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-17 22:56:59.018 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-17 22:56:59.018 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-17 22:56:59.168 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:56:59.188 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-17 22:56:59.188 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-17 22:56:59.238 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:56:59.258 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:56:59.258 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:56:59.358 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:56:59.358 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 22:56:59.358 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:56:59.388 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 22:56:59.388 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 22:56:59.388 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:56:59.438 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.008536,
17-03-17 22:56:59.518 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 22:56:59.558 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:00.428 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:00.458 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:00.458 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-17 22:57:00.458 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:00.588 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:00.618 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 22:57:00.618 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 22:57:00.748 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:00.778 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 22:57:00.778 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 22:57:00.778 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:57:00.908 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:57:00.938 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:01.368 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:01.398 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:01.398 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:57:01.398 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:57:01.398 -07 000000429 INF: WaitCommand(10000) start
17-03-17 22:57:01.398 -07 000000593 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 22:57:01.398 -07 000000593 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 22:57:02.018 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 5 R1 1
17-03-17 22:57:02.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=1, R2=5, Total=6. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1099, R2=1137, Total=2236. Warn if over 250 bubbles per interval.
17-03-17 22:57:02.618 -07 000000593 INF: AsyncDelayTimer waited 1216ms
17-03-17 22:57:02.618 -07 000000593 INF: LanePump: Xmit /1?\r
17-03-17 22:57:02.648 -07 000000593 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 22:57:02.648 -07 000000593 INF: LanePump: Current Position of Pump is: 1110
17-03-17 22:57:02.778 -07 000000593 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 22:57:02.818 -07 000000593 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:04.348 -07 000000593 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:04.378 -07 000000593 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:04.798 -07 000000593 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:04.808 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.004458,
17-03-17 22:57:04.828 -07 000000593 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:04.828 -07 000000593 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-17 22:57:04.828 -07 000000593 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 22:57:04.828 -07 000000593 INF: ===================  ===================
17-03-17 22:57:07.018 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:07.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1099, R2=1137, Total=2236. Warn if over 250 bubbles per interval.
17-03-17 22:57:10.178 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.012614,
17-03-17 22:57:11.408 -07 000000429 INF: WaitCommand(10000) end
17-03-17 22:57:11.408 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:11.408 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-17 22:57:11.408 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:11.438 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 22:57:11.438 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 22:57:11.438 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:57:11.568 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-17 22:57:11.608 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:12.018 -07 000000486 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:12.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1099, R2=1137, Total=2236. Warn if over 250 bubbles per interval.
17-03-17 22:57:15.548 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.014009,
17-03-17 22:57:17.018 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 6 R1 3
17-03-17 22:57:17.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=3, R2=6, Total=9. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1102, R2=1143, Total=2245. Warn if over 250 bubbles per interval.
17-03-17 22:57:17.738 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:17.768 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:18.188 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:18.218 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:18.638 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:18.668 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:19.088 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:19.118 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:19.538 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:19.568 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:19.568 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-17 22:57:19.568 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:19.698 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:19.728 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 22:57:19.728 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 22:57:19.858 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:19.888 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 22:57:19.888 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 22:57:19.888 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:57:20.018 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:57:20.048 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:20.478 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:20.508 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:20.508 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 22:57:20.508 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:57:20.918 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.004458,
17-03-17 22:57:21.728 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 22:57:21.728 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-17 22:57:21.728 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:57:21.748 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:57:21.748 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-17 22:57:21.748 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-17 22:57:21.958 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:57:21.978 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-17 22:57:21.978 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-17 22:57:22.018 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-17 22:57:22.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:22.028 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:57:22.048 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 22:57:22.048 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:57:22.148 -07 000000610 INF: =================== Cycle #70, Pumping Reagent IMT (1) ===================
17-03-17 22:57:22.148 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 22:57:22.148 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:22.178 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-17 22:57:22.178 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-17 22:57:22.178 -07 000000610 INF: =================== Cycle #70, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-17 22:57:22.308 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 22:57:22.348 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:23.788 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:23.818 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:24.238 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:24.268 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:24.268 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 22:57:24.268 -07 000000610 INF: =================== Cycle #70, Pumping Reagent IMT (1) ===================
17-03-17 22:57:24.398 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:24.428 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 22:57:24.428 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 22:57:24.558 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:24.588 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 22:57:24.588 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 22:57:24.588 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:57:24.718 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:57:24.748 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:25.178 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:25.208 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:25.208 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:57:25.208 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:57:26.298 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.981281,
17-03-17 22:57:26.428 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-17 22:57:26.428 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 22:57:26.428 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:57:26.448 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-17 22:57:26.448 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-17 22:57:26.448 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 22:57:26.678 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:57:26.698 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-17 22:57:26.698 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-17 22:57:26.748 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:57:26.768 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:57:26.768 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:57:26.868 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:26.868 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 22:57:26.868 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:26.898 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-17 22:57:26.898 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-17 22:57:26.898 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:57:27.018 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:27.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:27.028 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 22:57:27.068 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:27.938 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:27.968 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:27.968 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-17 22:57:27.968 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:28.098 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:28.128 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 22:57:28.128 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 22:57:28.258 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:28.288 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 22:57:28.288 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 22:57:28.288 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:57:28.418 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:57:28.448 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:28.878 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:28.908 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:28.908 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:57:28.908 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:57:28.908 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 65° ===================
17-03-17 22:57:28.908 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-17 22:57:28.908 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-17 22:57:28.918 -07 000000475 INF: FPGA: Recv TEC2TEMP 
17-03-17 22:57:28.918 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:57:28.918 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 22:57:28.918 -07 000000593 INF: FPGA: Recv TEC2EN 
17-03-17 22:57:28.928 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:57:28.928 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 65° ===================
17-03-17 22:57:28.928 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:57:28.928 -07 000000610 INF: WaitCommand(30000) start
17-03-17 22:57:31.658 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.981281,
17-03-17 22:57:32.018 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:32.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:37.028 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:37.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:37.038 -07 000000551 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.985358,
17-03-17 22:57:42.018 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:42.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:42.408 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.979922,
17-03-17 22:57:47.018 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:47.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:47.768 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.993549,
17-03-17 22:57:52.018 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:52.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:53.138 -07 000000415 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.978563,
17-03-17 22:57:57.018 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:57:57.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:57:58.508 -07 000000482 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.999021,
17-03-17 22:57:58.938 -07 000000610 INF: WaitCommand(30000) end
17-03-17 22:57:58.938 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:58.938 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-17 22:57:59.038 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:59.068 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-17 22:57:59.068 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-17 22:57:59.068 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:57:59.198 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-17 22:57:59.238 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:57:59.778 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:57:59.808 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:57:59.808 -07 000000610 INF: LanePump: Waited 570 ms for pump motion to complete
17-03-17 22:57:59.808 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:57:59.938 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:57:59.968 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 22:57:59.968 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 22:58:00.098 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:00.128 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 22:58:00.128 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-17 22:58:00.128 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:58:00.258 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:58:00.288 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:00.718 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:00.748 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:00.748 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:58:00.748 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:58:00.748 -07 000000576 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 22:58:00.748 -07 000000475 INF: WaitCommand(30000) start
17-03-17 22:58:00.748 -07 000000576 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 22:58:01.968 -07 000000576 INF: AsyncDelayTimer waited 1216ms
17-03-17 22:58:01.968 -07 000000576 INF: LanePump: Xmit /1?\r
17-03-17 22:58:01.998 -07 000000576 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-17 22:58:01.998 -07 000000576 INF: LanePump: Current Position of Pump is: 1920
17-03-17 22:58:02.018 -07 000000627 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:02.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:02.128 -07 000000576 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 22:58:02.168 -07 000000576 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:03.878 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.989471,
17-03-17 22:58:04.508 -07 000000576 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:04.538 -07 000000576 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:04.958 -07 000000576 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:04.988 -07 000000576 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:04.988 -07 000000576 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-17 22:58:04.988 -07 000000576 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 22:58:04.988 -07 000000576 INF: ===================  ===================
17-03-17 22:58:07.018 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:07.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:09.248 -07 000000478 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.989471,
17-03-17 22:58:12.018 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:12.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:14.618 -07 000000415 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.011254,
17-03-17 22:58:17.018 -07 000000409 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:17.018 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:19.988 -07 000000593 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.999021,
17-03-17 22:58:22.018 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:22.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:25.358 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.001704,
17-03-17 22:58:27.018 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:27.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:30.728 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.985358,
17-03-17 22:58:30.758 -07 000000475 INF: WaitCommand(30000) end
17-03-17 22:58:30.758 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 22° ===================
17-03-17 22:58:30.758 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-17 22:58:31.088 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-17 22:58:31.088 -07 000000448 INF: FPGA: Recv TEC2EN 
17-03-17 22:58:31.098 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:58:31.098 -07 000000610 INF: =================== Cycle #70, Flow Cell Temp 22° ===================
17-03-17 22:58:31.098 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:58:31.098 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:58:31.098 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-17 22:58:31.118 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:31.148 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-17 22:58:31.148 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-17 22:58:31.148 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:58:31.278 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-17 22:58:31.318 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:32.018 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:32.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:34.448 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:34.478 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:34.898 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:34.928 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:35.348 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:35.378 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:35.378 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-17 22:58:35.378 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:58:35.508 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:35.538 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 22:58:35.538 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 22:58:35.668 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:35.698 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 22:58:35.698 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 22:58:35.698 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:58:35.828 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:58:35.858 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:36.098 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.999021,
17-03-17 22:58:36.288 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:36.318 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:36.318 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:58:36.318 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:58:37.028 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:37.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:37.538 -07 000000610 INF: AsyncDelayTimer waited 1216ms
17-03-17 22:58:37.538 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-17 22:58:37.538 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:58:37.558 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:58:37.558 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-17 22:58:37.558 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-17 22:58:37.708 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:58:37.728 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 22:58:37.728 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 22:58:37.778 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:58:37.798 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 22:58:37.798 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:58:37.898 -07 000000610 INF: =================== Cycle #70, Pumping Reagent USM (2) ===================
17-03-17 22:58:37.898 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-17 22:58:37.898 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:37.928 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-17 22:58:37.928 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-17 22:58:37.928 -07 000000610 INF: =================== Cycle #70, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-17 22:58:38.058 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-17 22:58:38.098 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:39.538 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:39.568 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:39.988 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:40.018 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:40.018 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-17 22:58:40.018 -07 000000610 INF: =================== Cycle #70, Pumping Reagent USM (2) ===================
17-03-17 22:58:40.148 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:40.178 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 22:58:40.178 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 22:58:40.308 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:40.338 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 22:58:40.338 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 22:58:40.338 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:58:40.468 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:58:40.498 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:40.928 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:40.958 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:40.958 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-17 22:58:40.958 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:58:41.468 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.018051,
17-03-17 22:58:42.028 -07 000000551 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:42.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:42.178 -07 000000610 INF: AsyncDelayTimer waited 1217ms
17-03-17 22:58:42.178 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-17 22:58:42.178 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:58:42.198 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-17 22:58:42.198 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-17 22:58:42.198 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-17 22:58:42.348 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:58:42.368 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-17 22:58:42.368 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-17 22:58:42.418 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:58:42.438 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:58:42.438 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-17 22:58:42.538 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:58:42.538 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-17 22:58:42.538 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:42.568 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-17 22:58:42.568 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-17 22:58:42.568 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-17 22:58:42.698 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-17 22:58:42.738 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:43.608 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:43.638 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:43.638 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-17 22:58:43.638 -07 000000610 INF: =================== Cycle #70, Pumping Reagent PR2 (3) ===================
17-03-17 22:58:43.768 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:43.798 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 22:58:43.798 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 22:58:43.928 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-17 22:58:43.958 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 22:58:43.958 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-17 22:58:43.958 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-17 22:58:44.088 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-17 22:58:44.118 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:44.548 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:44.578 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:44.578 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-17 22:58:44.578 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 22:58:44.578 -07 000000501 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 22:58:44.578 -07 000000501 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-17 22:58:44.578 -07 000000462 INF: WaitCommand(10000) start
17-03-17 22:58:45.798 -07 000000501 INF: AsyncDelayTimer waited 1215ms
17-03-17 22:58:45.798 -07 000000501 INF: LanePump: Xmit /1?\r
17-03-17 22:58:45.828 -07 000000501 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-17 22:58:45.828 -07 000000501 INF: LanePump: Current Position of Pump is: 1110
17-03-17 22:58:45.958 -07 000000501 INF: LanePump: Xmit /1V1500OA0R\r
17-03-17 22:58:45.998 -07 000000501 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:46.838 -07 000000541 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.049392,
17-03-17 22:58:47.028 -07 000000478 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:47.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:47.528 -07 000000501 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:47.558 -07 000000501 INF: LanePump: Recv /0@(0x03)\r\n
17-03-17 22:58:47.978 -07 000000501 INF: LanePump: Xmit /1Q\r
17-03-17 22:58:48.008 -07 000000501 INF: LanePump: Recv /0`(0x03)\r\n
17-03-17 22:58:48.008 -07 000000501 INF: LanePump: Waited 2010 ms for pump motion to complete
17-03-17 22:58:48.008 -07 000000501 INF: =================== Dispense to DispenseAndWait ===================
17-03-17 22:58:48.008 -07 000000501 INF: ===================  ===================
17-03-17 22:58:52.028 -07 000000382 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:52.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:52.208 -07 000000627 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.994908,
17-03-17 22:58:54.588 -07 000000462 INF: WaitCommand(10000) end
17-03-17 22:58:54.588 -07 000000610 INF: =================== Cycle #70, Imaging ===================
17-03-17 22:58:54.588 -07 000000610 INF: Imaging Cycle 70: ScanTilesCommand Cycle 70 time start.
17-03-17 22:58:54.588 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-17 22:58:54.588 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:58:54.618 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-17 22:58:54.618 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-17 22:58:54.618 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-17 22:58:54.918 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-17 22:58:54.938 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-17 22:58:54.938 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-17 22:58:54.988 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-17 22:58:55.008 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-17 22:58:55.008 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:58:55.008 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:58:55.008 -07 000000627 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-17 22:58:55.008 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:58:55.008 -07 000000627 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-17 22:58:55.018 -07 000000501 INF: FPGA: Recv EXLED1ON 
17-03-17 22:58:55.018 -07 000000627 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 22:58:55.018 -07 000000627 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-17 22:58:55.018 -07 000000448 INF: FPGA: Recv EXLED1ADCR 23154
17-03-17 22:58:55.028 -07 000000627 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:58:55.028 -07 000000627 INF: RedLED: Using Red data: Photodiode ADC 23154 --> 7.4 mW (old method), or 205.2 mW (new method). Difference = 197.8 mW
17-03-17 22:58:55.028 -07 000000627 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-17 22:58:55.028 -07 000000502 INF: FPGA: Recv EXLED1OFF 
17-03-17 22:58:55.038 -07 000000627 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:58:55.038 -07 000000627 INF: RedLED: LED was on for 19 ms
17-03-17 22:58:55.038 -07 000000627 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 22 ms.
17-03-17 22:58:55.038 -07 000000627 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-17 22:58:55.038 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:58:55.038 -07 000000627 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-17 22:58:55.038 -07 000000623 INF: FPGA: Recv EXLED2ON 
17-03-17 22:58:55.048 -07 000000627 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 22:58:55.048 -07 000000627 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 22:58:55.048 -07 000000593 INF: FPGA: Recv EXLED1ADCR 2103
17-03-17 22:58:55.058 -07 000000627 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:58:55.058 -07 000000627 INF: GreenLED: Using Green data: Photodiode ADC 2103 --> 0.9 mW (old method), or 182.7 mW (new method). Difference = 181.8 mW
17-03-17 22:58:55.058 -07 000000627 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-17 22:58:55.058 -07 000000576 INF: FPGA: Recv EXLED2OFF 
17-03-17 22:58:55.068 -07 000000627 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:58:55.068 -07 000000627 INF: GreenLED: LED was on for 19 ms
17-03-17 22:58:55.068 -07 000000627 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-17 22:58:55.068 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 22:58:55.068 -07 000000593 INF: FPGA: Recv EMCUR 
17-03-17 22:58:55.078 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:58:55.078 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-17 22:58:55.578 -07 000000623 INF: FPGA: Recv EMOUT
17-03-17 22:58:55.578 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 22:58:55.578 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-17 22:58:55.578 -07 000000462 INF: FPGA: Recv EMCUR 
17-03-17 22:58:55.588 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:58:55.588 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 22:58:55.588 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.12745422748849. ------
17-03-17 22:58:55.588 -07 000000486 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17929 mm
17-03-17 22:58:55.588 -07 000000486 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:58:55.588 -07 000000382 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:58:55.588 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 22:58:55.588 -07 000000475 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm
17-03-17 22:58:55.588 -07 000000478 INF: Z Motor: Entering MoveAbsStepped (DAC = 39166, sync = True, waitForSettling = False)
17-03-17 22:58:55.588 -07 000000478 INF: Z Motor: Moving to -0.179290 mm, started at -0.127454 mm, distance = -51.84 um
17-03-17 22:58:55.588 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:58:55.598 -07 000000478 INF: FPGA: Xmit ZDACW 39166\n [Z Motor]
17-03-17 22:58:55.598 -07 000000382 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:58:55.598 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 22:58:55.608 -07 000000478 INF: FPGA: 'ZDACW 39166' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 22:58:55.608 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:58:55.608 -07 000000576 INF: FPGA: Recv YRDPOS 154381
17-03-17 22:58:55.618 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 22:58:55.618 -07 000000475 INF: Y Motor: Encoder = 154381 = motor step 120610.2 = 75.3813 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:58:55.618 -07 000000382 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 22:58:55.618 -07 000000475 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-17 22:58:55.618 -07 000000475 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 22:58:55.628 -07 000000478 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:58:55.628 -07 000000623 INF: FPGA: Recv ZDACR 39166
17-03-17 22:58:55.638 -07 000000475 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 22:58:55.638 -07 000000478 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:58:55.638 -07 000000478 INF: Z Motor: MoveAbsStepped took 42 ms (did NOT wait for settling yet))
17-03-17 22:58:55.818 -07 000000623 INF: FPGA: Recv FOCMRRFOC
17-03-17 22:58:55.818 -07 000000382 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 223 ms overall
17-03-17 22:58:57.028 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:58:57.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:58:57.318 -07 000000409 INF: FPGA: Recv YMVTO 122703 24777
17-03-17 22:58:57.318 -07 000000475 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1703 ms overall
17-03-17 22:58:57.318 -07 000000475 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 22:58:57.318 -07 000000475 INF: Y Motor: To move from 75.381 to 59.913 (-15.468 mm) should take 24750 steps, but required 24777 steps (15.486 mm). Slippage = 0.017 mm (0.00%).
17-03-17 22:58:57.318 -07 000000475 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1703 ms, distance = 15.468 mm, average velocity = 9.083 mm/sec
17-03-17 22:58:57.578 -07 000000429 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.999021,
17-03-17 22:59:00.168 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:00.168 -07 000000429 INF: FPGA: Recv YRDPOS 122697
17-03-17 22:59:00.178 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:00.178 -07 000000475 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:00.198 -07 000000475 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:00.198 -07 000000475 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-17 22:59:00.198 -07 000000475 INF: Y Motor: Moved to 59.9106 after 4611 ms
17-03-17 22:59:00.208 -07 000000486 INF: Z Motor: EndOfMoveAbsStepped: target = -0.179290 mm (DAC = 39166)
17-03-17 22:59:00.208 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.208 -07 000000627 INF: FPGA: Recv ZSGSRD 37194
17-03-17 22:59:00.218 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:00.218 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.218 -07 000000623 INF: FPGA: Recv ZSGSRD 37198
17-03-17 22:59:00.228 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.228 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.228 -07 000000409 INF: FPGA: Recv ZSGSRD 37199
17-03-17 22:59:00.238 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.238 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.238 -07 000000541 INF: FPGA: Recv ZSGSRD 37201
17-03-17 22:59:00.248 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.248 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.248 -07 000000482 INF: FPGA: Recv ZSGSRD 37199
17-03-17 22:59:00.258 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.258 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.258 -07 000000478 INF: FPGA: Recv ZSGSRD 37201
17-03-17 22:59:00.268 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.268 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.268 -07 000000576 INF: FPGA: Recv ZSGSRD 37193
17-03-17 22:59:00.278 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.278 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.278 -07 000000475 INF: FPGA: Recv ZSGSRD 37204
17-03-17 22:59:00.288 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.288 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.288 -07 000000627 INF: FPGA: Recv ZSGSRD 37197
17-03-17 22:59:00.298 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.298 -07 000000486 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:00.298 -07 000000482 INF: FPGA: Recv ZSGSRD 37197
17-03-17 22:59:00.308 -07 000000486 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.308 -07 000000486 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:00.308 -07 000000415 INF: FPGA: Recv ZPIEZORD 33579
17-03-17 22:59:00.318 -07 000000486 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:00.318 -07 000000486 INF: Z Motor: Piezo is near 51.7 V (nominally 0 to 100 V), expect near 59.8 V, since DAC is at 5.976 V. Piezo Error = -8.0 V.
17-03-17 22:59:00.318 -07 000000486 INF: Z Motor: ReadAdcAverage: Commanded Z = -179.3 um, Read 10 ADC samples: Avg = 37198 (-178.4 uncal um), Error = 0.9 uncal um, Median = 37198 (-178.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37193 (-178.4 uncal um), Max = 37204 (-178.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:00.318 -07 000000486 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37198, posNoise = 6, negNoise = 5
17-03-17 22:59:00.318 -07 000000486 INF: Z Motor: After move to -0.179290, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:00.318 -07 000000486 INF: Z Motor: Settle wait time = 4614 ms, measure time = 108 ms (allowed 150 ms), total time = 4722 ms
17-03-17 22:59:00.318 -07 000000486 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:00.368 -07 000000486 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4774 ms
17-03-17 22:59:00.368 -07 000000486 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:00.368 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:00.368 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:00.368 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:00.368 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:00.368 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 22:59:00.368 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:00.368 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:00.368 -07 000000482 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 22:59:00.398 -07 000000482 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-17 22:59:00.398 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 22:59:00.398 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-17 22:59:00.398 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 22:59:00.408 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 22:59:00.408 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 41 ms.
17-03-17 22:59:00.418 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 22:59:00.458 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 22:59:00.658 -07 000000541 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 22:59:00.658 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 22:59:00.658 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 22:59:00.658 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) start.
17-03-17 22:59:00.698 -07 000000382 INF: FPGA: Recv @CAMSNAP 280
17-03-17 22:59:00.698 -07 000000448 INF: FPGA: Recv CAMSNAP
17-03-17 22:59:00.698 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 275 ms to get response, and 285 ms overall
17-03-17 22:59:00.788 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2218332320, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 22:59:00.788 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:00.788 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 22:59:00.788 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 22:59:00.798 -07 000000541 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:00.798 -07 000000409 INF: Image SNR check: start
17-03-17 22:59:00.798 -07 000000486 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:00.808 -07 000000541 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:59:00.808 -07 000000541 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 22:59:00.808 -07 000000409 INF: Image SNR check: pass  [peak (Max-Min)=59.52]
17-03-17 22:59:00.808 -07 000000409 INF: Autofocus start
17-03-17 22:59:00.808 -07 000000409 INF: MeasureProfile start
17-03-17 22:59:00.818 -07 000000409 INF: MeasureProfile done
17-03-17 22:59:00.828 -07 000000409 INF: X=32  Z correction [um]=0.09220707
17-03-17 22:59:00.828 -07 000000409 INF: Autofocus finished
17-03-17 22:59:01.008 -07 000000429 INF: FPGA: Recv FOCMRRIMG
17-03-17 22:59:01.008 -07 000000541 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall
17-03-17 22:59:01.018 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.179291195260359. ----------
17-03-17 22:59:01.018 -07 000000610 INF: Cycle	70	Tile	1	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:01.018 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37698, sync = True, waitForSettling = True)
17-03-17 22:59:01.018 -07 000000610 INF: Z Motor: Moving to -0.172570 mm, started at -0.179291 mm, distance = 6.72 um
17-03-17 22:59:01.018 -07 000000610 INF: FPGA: Xmit ZDACW 37698\n [Z Motor]
17-03-17 22:59:01.018 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 22:59:01.028 -07 000000610 INF: FPGA: 'ZDACW 37698' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:59:01.028 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:01.028 -07 000000547 INF: FPGA: Recv ZDACR 37698
17-03-17 22:59:01.038 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.038 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:01.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.188 -07 000000551 INF: FPGA: Recv ZSGSRD 36154
17-03-17 22:59:01.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:01.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.198 -07 000000618 INF: FPGA: Recv ZSGSRD 36153
17-03-17 22:59:01.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.208 -07 000000541 INF: FPGA: Recv ZSGSRD 36157
17-03-17 22:59:01.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.218 -07 000000576 INF: FPGA: Recv ZSGSRD 36159
17-03-17 22:59:01.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.228 -07 000000501 INF: FPGA: Recv ZSGSRD 36156
17-03-17 22:59:01.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:01.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.238 -07 000000482 INF: FPGA: Recv ZSGSRD 36153
17-03-17 22:59:01.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.248 -07 000000623 INF: FPGA: Recv ZSGSRD 36154
17-03-17 22:59:01.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.258 -07 000000382 INF: FPGA: Recv ZSGSRD 36155
17-03-17 22:59:01.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.268 -07 000000409 INF: FPGA: Recv ZSGSRD 36160
17-03-17 22:59:01.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:01.278 -07 000000478 INF: FPGA: Recv ZSGSRD 36149
17-03-17 22:59:01.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.288 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:01.288 -07 000000429 INF: FPGA: Recv ZPIEZORD 32200
17-03-17 22:59:01.298 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:01.298 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.752 V. Piezo Error = -8.7 V.
17-03-17 22:59:01.298 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.6 um, Read 10 ADC samples: Avg = 36155 (-171.7 uncal um), Error = 0.9 uncal um, Median = 36154 (-171.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36149 (-171.7 uncal um), Max = 36160 (-171.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 22:59:01.298 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36155, posNoise = 5, negNoise = 6
17-03-17 22:59:01.298 -07 000000610 INF: Z Motor: After move to -0.172570, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:01.298 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 22:59:01.298 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:01.298 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:01.298 -07 000000415 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:01.298 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:01.298 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:01.298 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:01.298 -07 000000409 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:01.298 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:01.298 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:01.298 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:01.298 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:01.298 -07 000000409 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 22:59:01.308 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:01.308 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:01.318 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 22:59:01.318 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 22:59:01.328 -07 000000409 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms.
17-03-17 22:59:01.328 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:01.328 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:01.328 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:01.338 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 22:59:01.338 -07 000000409 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 38 ms.
17-03-17 22:59:01.338 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37875 150\n [Camera]
17-03-17 22:59:01.538 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:02.008 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:02.008 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:02.008 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:02.138 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:02.138 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:02.138 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:02.138 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:02.138 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:02.138 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:02.138 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 22:59:02.148 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:02.148 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-17 22:59:02.198 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37875 849
17-03-17 22:59:02.348 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:02.538 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 22:59:02.538 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 22:59:02.538 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:02.538 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:02.538 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 533 ms.
17-03-17 22:59:02.538 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 398 ms.
17-03-17 22:59:02.548 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 22:59:02.548 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:02.548 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:02.558 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-17 22:59:02.568 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:02.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:02.568 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:02.578 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:02.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:02.578 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:02.688 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:02.688 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 22:59:02.688 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:02.688 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 22:59:02.758 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 22:59:02.758 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:02.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37875 150' command took 2 ms to send, 1409 ms to get response, and 1422 ms overall
17-03-17 22:59:02.768 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172542
17-03-17 22:59:02.768 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17254 mm
17-03-17 22:59:02.768 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:02.768 -07 000000415 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 22:59:02.768 -07 000000415 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-17 22:59:02.768 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:02.768 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37692, sync = True, waitForSettling = False)
17-03-17 22:59:02.768 -07 000000502 INF: Z Motor: Moving to -0.172543 mm, started at -0.172591 mm, distance = 0.05 um
17-03-17 22:59:02.768 -07 000000382 INF: FPGA: Recv YRDPOS 122697
17-03-17 22:59:02.778 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 22:59:02.778 -07 000000415 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:02.778 -07 000000415 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:02.778 -07 000000502 INF: FPGA: Xmit ZDACW 37692\n [Z Motor]
17-03-17 22:59:02.778 -07 000000415 INF: Y Motor: Moving 1331 steps2
17-03-17 22:59:02.778 -07 000000478 INF: FPGA: Recv ZDACW
17-03-17 22:59:02.788 -07 000000502 INF: FPGA: 'ZDACW 37692' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 22:59:02.788 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:02.788 -07 000000576 INF: FPGA: Recv ZDACR 37692
17-03-17 22:59:02.798 -07 000000415 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:02.798 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:02.798 -07 000000502 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-17 22:59:03.008 -07 000000382 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.008536,
17-03-17 22:59:03.078 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 22:59:03.078 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 22:59:03.078 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:03.078 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 387 ms.
17-03-17 22:59:03.078 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 22:59:03.078 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:03.078 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 22:59:03.078 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 510 ms.
17-03-17 22:59:03.078 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:03.088 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 514 ms.
17-03-17 22:59:03.168 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-17 22:59:03.168 -07 000000415 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 22:59:03.208 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:03.208 -07 000000429 INF: FPGA: Recv YRDPOS 124380
17-03-17 22:59:03.218 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:03.218 -07 000000415 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:03.218 -07 000000415 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-17 22:59:03.218 -07 000000415 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.832 mm, average velocity = 2.096 mm/sec
17-03-17 22:59:04.168 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:04.168 -07 000000486 INF: FPGA: Recv YRDPOS 124380
17-03-17 22:59:04.178 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.178 -07 000000415 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:04.198 -07 000000415 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:04.198 -07 000000415 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:04.198 -07 000000415 INF: Y Motor: Moved to 60.7324 after 1432 ms (table move)
17-03-17 22:59:04.198 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172543 mm (DAC = 37692)
17-03-17 22:59:04.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.208 -07 000000501 INF: FPGA: Recv ZSGSRD 36156
17-03-17 22:59:04.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:04.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.208 -07 000000462 INF: FPGA: Recv ZSGSRD 36150
17-03-17 22:59:04.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:04.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.218 -07 000000478 INF: FPGA: Recv ZSGSRD 36149
17-03-17 22:59:04.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.228 -07 000000623 INF: FPGA: Recv ZSGSRD 36147
17-03-17 22:59:04.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.238 -07 000000382 INF: FPGA: Recv ZSGSRD 36156
17-03-17 22:59:04.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.248 -07 000000409 INF: FPGA: Recv ZSGSRD 36153
17-03-17 22:59:04.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.258 -07 000000486 INF: FPGA: Recv ZSGSRD 36146
17-03-17 22:59:04.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.268 -07 000000541 INF: FPGA: Recv ZSGSRD 36142
17-03-17 22:59:04.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.278 -07 000000593 INF: FPGA: Recv ZSGSRD 36147
17-03-17 22:59:04.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.288 -07 000000462 INF: FPGA: Recv ZSGSRD 36150
17-03-17 22:59:04.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.298 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:04.298 -07 000000502 INF: FPGA: Recv ZPIEZORD 32195
17-03-17 22:59:04.308 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.308 -07 000000610 INF: Z Motor: Piezo is near 48.8 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.751 V. Piezo Error = -8.7 V.
17-03-17 22:59:04.308 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.5 um, Read 10 ADC samples: Avg = 36150 (-171.7 uncal um), Error = 0.9 uncal um, Median = 36150 (-171.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36142 (-171.6 uncal um), Max = 36156 (-171.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 22:59:04.308 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36150, posNoise = 6, negNoise = 8
17-03-17 22:59:04.308 -07 000000610 INF: Z Motor: After move to -0.172543, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:04.308 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 102 ms (allowed 150 ms), total time = 1535 ms
17-03-17 22:59:04.308 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:04.358 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-17 22:59:04.358 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:04.358 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.172558620935794. ----------
17-03-17 22:59:04.358 -07 000000610 INF: Cycle	70	Tile	2	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:04.358 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37515, sync = True, waitForSettling = True)
17-03-17 22:59:04.358 -07 000000610 INF: Z Motor: Moving to -0.171733 mm, started at -0.172559 mm, distance = 0.83 um
17-03-17 22:59:04.358 -07 000000610 INF: FPGA: Xmit ZDACW 37515\n [Z Motor]
17-03-17 22:59:04.358 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 22:59:04.368 -07 000000610 INF: FPGA: 'ZDACW 37515' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 22:59:04.368 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:04.368 -07 000000576 INF: FPGA: Recv ZDACR 37515
17-03-17 22:59:04.378 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.378 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:04.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.528 -07 000000501 INF: FPGA: Recv ZSGSRD 36023
17-03-17 22:59:04.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:04.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.538 -07 000000415 INF: FPGA: Recv ZSGSRD 36025
17-03-17 22:59:04.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.548 -07 000000593 INF: FPGA: Recv ZSGSRD 36020
17-03-17 22:59:04.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.558 -07 000000551 INF: FPGA: Recv ZSGSRD 36024
17-03-17 22:59:04.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.568 -07 000000502 INF: FPGA: Recv ZSGSRD 36024
17-03-17 22:59:04.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.578 -07 000000482 INF: FPGA: Recv ZSGSRD 36023
17-03-17 22:59:04.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.588 -07 000000415 INF: FPGA: Recv ZSGSRD 36021
17-03-17 22:59:04.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.598 -07 000000623 INF: FPGA: Recv ZSGSRD 36023
17-03-17 22:59:04.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.608 -07 000000627 INF: FPGA: Recv ZSGSRD 36025
17-03-17 22:59:04.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:04.618 -07 000000541 INF: FPGA: Recv ZSGSRD 36023
17-03-17 22:59:04.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.628 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:04.628 -07 000000409 INF: FPGA: Recv ZPIEZORD 32051
17-03-17 22:59:04.638 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:04.638 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.724 V. Piezo Error = -8.8 V.
17-03-17 22:59:04.638 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.7 um, Read 10 ADC samples: Avg = 36023 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36023 (-170.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 36020 (-170.8 uncal um), Max = 36025 (-170.9 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 22:59:04.638 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36023, posNoise = 2, negNoise = 3
17-03-17 22:59:04.638 -07 000000610 INF: Z Motor: After move to -0.171733, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:04.638 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 22:59:04.638 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:04.638 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:04.638 -07 000000623 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:04.638 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:04.638 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:04.638 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:04.638 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:04.638 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:04.638 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 22:59:04.638 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:04.638 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:04.638 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:04.638 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:04.638 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:04.648 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 22:59:04.648 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:04.658 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 22:59:04.658 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:04.658 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 22:59:04.658 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 22:59:04.668 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37692 150\n [Camera]
17-03-17 22:59:04.868 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:05.328 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:05.328 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:05.328 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:05.328 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:05.328 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2233008400, 0x0, 391868352) start.
17-03-17 22:59:05.328 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:05.328 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:05.328 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:05.328 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:05.328 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-17 22:59:05.518 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37692 849
17-03-17 22:59:05.668 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:05.708 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 22:59:05.708 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 22:59:05.708 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:05.718 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2233008400, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 22:59:05.718 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 22:59:05.718 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:05.718 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:05.718 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:05.718 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 22:59:05.718 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 22:59:05.898 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:05.898 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:05.898 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:05.898 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:05.898 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-17 22:59:05.898 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:05.898 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:05.898 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:05.898 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:05.898 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-17 22:59:06.088 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:06.088 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:06.088 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37692 150' command took 2 ms to send, 1412 ms to get response, and 1422 ms overall
17-03-17 22:59:06.088 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 22:59:06.088 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.732421875, Z-Position -0.17174274599379. ------
17-03-17 22:59:06.088 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:06.088 -07 000000448 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17830 mm
17-03-17 22:59:06.088 -07 000000448 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:06.098 -07 000000486 INF: Z Motor: Entering MoveAbsStepped (DAC = 38949, sync = True, waitForSettling = False)
17-03-17 22:59:06.098 -07 000000486 INF: Z Motor: Moving to -0.178297 mm, started at -0.171743 mm, distance = -6.55 um
17-03-17 22:59:06.098 -07 000000551 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 22:59:06.098 -07 000000551 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-17 22:59:06.098 -07 000000623 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:06.098 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-17 22:59:06.098 -07 000000486 INF: FPGA: Xmit ZDACW 38949\n [Z Motor]
17-03-17 22:59:06.098 -07 000000462 INF: FPGA: Recv ZDACW
17-03-17 22:59:06.108 -07 000000551 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:06.108 -07 000000486 INF: FPGA: 'ZDACW 38949' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 22:59:06.108 -07 000000501 INF: FPGA: Recv YRDPOS 124380
17-03-17 22:59:06.118 -07 000000551 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 22:59:06.118 -07 000000429 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 22:59:06.118 -07 000000551 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:06.118 -07 000000551 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:06.118 -07 000000551 INF: Y Motor: Moving 1344 steps-21
17-03-17 22:59:06.128 -07 000000486 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:06.128 -07 000000501 INF: FPGA: Recv ZDACR 38949
17-03-17 22:59:06.138 -07 000000486 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:06.138 -07 000000486 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-17 22:59:06.138 -07 000000551 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:06.298 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 403 ms.
17-03-17 22:59:06.298 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 22:59:06.298 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:06.298 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 403 ms.
17-03-17 22:59:06.298 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 22:59:06.298 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:06.308 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:06.308 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-17 22:59:06.308 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:06.308 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-17 22:59:06.318 -07 000000382 INF: FPGA: Recv FOCMRRFOC
17-03-17 22:59:06.318 -07 000000429 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 219 ms overall
17-03-17 22:59:06.508 -07 000000409 INF: FPGA: Recv YMVTILE
17-03-17 22:59:06.508 -07 000000551 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 22:59:06.548 -07 000000551 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:06.558 -07 000000382 INF: FPGA: Recv YRDPOS 126081
17-03-17 22:59:06.558 -07 000000551 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:06.558 -07 000000551 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:06.558 -07 000000551 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 22:59:06.558 -07 000000551 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-17 22:59:07.028 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:07.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:07.508 -07 000000551 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:07.508 -07 000000502 INF: FPGA: Recv YRDPOS 126082
17-03-17 22:59:07.518 -07 000000551 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:07.518 -07 000000551 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:07.538 -07 000000551 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:07.538 -07 000000551 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 22:59:07.538 -07 000000551 INF: Y Motor: Moved to 61.5635 after 1443 ms (table move)
17-03-17 22:59:07.538 -07 000000448 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178297 mm (DAC = 38949)
17-03-17 22:59:07.538 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.548 -07 000000475 INF: FPGA: Recv ZSGSRD 37046
17-03-17 22:59:07.548 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:07.548 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.548 -07 000000593 INF: FPGA: Recv ZSGSRD 37046
17-03-17 22:59:07.558 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:07.558 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.558 -07 000000486 INF: FPGA: Recv ZSGSRD 37043
17-03-17 22:59:07.568 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.568 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.568 -07 000000482 INF: FPGA: Recv ZSGSRD 37044
17-03-17 22:59:07.578 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.578 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.578 -07 000000429 INF: FPGA: Recv ZSGSRD 37049
17-03-17 22:59:07.588 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.588 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.588 -07 000000462 INF: FPGA: Recv ZSGSRD 37050
17-03-17 22:59:07.598 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.598 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.598 -07 000000541 INF: FPGA: Recv ZSGSRD 37049
17-03-17 22:59:07.608 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.608 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.608 -07 000000478 INF: FPGA: Recv ZSGSRD 37045
17-03-17 22:59:07.618 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.618 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.618 -07 000000576 INF: FPGA: Recv ZSGSRD 37042
17-03-17 22:59:07.628 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.628 -07 000000448 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:07.628 -07 000000593 INF: FPGA: Recv ZSGSRD 37045
17-03-17 22:59:07.638 -07 000000448 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.638 -07 000000448 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:07.638 -07 000000551 INF: FPGA: Recv ZPIEZORD 33400
17-03-17 22:59:07.648 -07 000000448 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:07.648 -07 000000448 INF: Z Motor: Piezo is near 51.4 V (nominally 0 to 100 V), expect near 59.4 V, since DAC is at 5.943 V. Piezo Error = -8.1 V.
17-03-17 22:59:07.648 -07 000000448 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.3 um, Read 10 ADC samples: Avg = 37046 (-177.4 uncal um), Error = 0.9 uncal um, Median = 37046 (-177.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 37042 (-177.4 uncal um), Max = 37050 (-177.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:07.648 -07 000000448 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37046, posNoise = 4, negNoise = 4
17-03-17 22:59:07.648 -07 000000448 INF: Z Motor: After move to -0.178297, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:07.648 -07 000000448 INF: Z Motor: Settle wait time = 1446 ms, measure time = 104 ms (allowed 150 ms), total time = 1550 ms
17-03-17 22:59:07.648 -07 000000448 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:07.698 -07 000000448 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-17 22:59:07.698 -07 000000448 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:07.698 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:07.698 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:07.698 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:07.698 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:07.698 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 22:59:07.698 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:07.698 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:07.698 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 22:59:07.708 -07 000000547 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:07.708 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 22:59:07.718 -07 000000547 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-17 22:59:07.718 -07 000000547 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-17 22:59:07.718 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 22:59:07.768 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 22:59:07.968 -07 000000448 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 22:59:07.968 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 22:59:07.968 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 22:59:07.968 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2199785120, 0x0, 559484976) start.
17-03-17 22:59:08.008 -07 000000501 INF: FPGA: Recv @CAMSNAP 280
17-03-17 22:59:08.008 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 22:59:08.008 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 285 ms overall
17-03-17 22:59:08.098 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2199785120, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 22:59:08.098 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:08.098 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 22:59:08.098 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 22:59:08.108 -07 000000593 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:08.108 -07 000000409 INF: Autofocus start
17-03-17 22:59:08.108 -07 000000409 INF: MeasureProfile start
17-03-17 22:59:08.108 -07 000000547 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:08.118 -07 000000593 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:59:08.118 -07 000000593 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 22:59:08.118 -07 000000409 INF: MeasureProfile done
17-03-17 22:59:08.118 -07 000000409 INF: X=16  Z correction [um]=0.01042744
17-03-17 22:59:08.118 -07 000000409 INF: Autofocus finished
17-03-17 22:59:08.318 -07 000000627 INF: FPGA: Recv FOCMRRIMG
17-03-17 22:59:08.318 -07 000000593 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 22:59:08.318 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.178314715014811. ----------
17-03-17 22:59:08.318 -07 000000610 INF: Cycle	70	Tile	3	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:08.328 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37464, sync = True, waitForSettling = True)
17-03-17 22:59:08.328 -07 000000610 INF: Z Motor: Moving to -0.171499 mm, started at -0.178315 mm, distance = 6.82 um
17-03-17 22:59:08.328 -07 000000610 INF: FPGA: Xmit ZDACW 37464\n [Z Motor]
17-03-17 22:59:08.328 -07 000000623 INF: FPGA: Recv ZDACW
17-03-17 22:59:08.338 -07 000000610 INF: FPGA: 'ZDACW 37464' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:08.338 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:08.338 -07 000000382 INF: FPGA: Recv ZDACR 37464
17-03-17 22:59:08.348 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.348 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:08.368 -07 000000478 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.983999,
17-03-17 22:59:08.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.498 -07 000000551 INF: FPGA: Recv ZSGSRD 35990
17-03-17 22:59:08.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:08.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.508 -07 000000462 INF: FPGA: Recv ZSGSRD 35985
17-03-17 22:59:08.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.518 -07 000000547 INF: FPGA: Recv ZSGSRD 35989
17-03-17 22:59:08.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.528 -07 000000486 INF: FPGA: Recv ZSGSRD 35992
17-03-17 22:59:08.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.538 -07 000000475 INF: FPGA: Recv ZSGSRD 35986
17-03-17 22:59:08.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.548 -07 000000541 INF: FPGA: Recv ZSGSRD 35986
17-03-17 22:59:08.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.558 -07 000000462 INF: FPGA: Recv ZSGSRD 35984
17-03-17 22:59:08.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.568 -07 000000502 INF: FPGA: Recv ZSGSRD 35988
17-03-17 22:59:08.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.578 -07 000000551 INF: FPGA: Recv ZSGSRD 35991
17-03-17 22:59:08.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:08.588 -07 000000409 INF: FPGA: Recv ZSGSRD 35985
17-03-17 22:59:08.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:08.598 -07 000000541 INF: FPGA: Recv ZPIEZORD 31979
17-03-17 22:59:08.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:08.608 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.717 V. Piezo Error = -8.9 V.
17-03-17 22:59:08.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.5 um, Read 10 ADC samples: Avg = 35988 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35987 (-170.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35984 (-170.6 uncal um), Max = 35992 (-170.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:08.608 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35988, posNoise = 4, negNoise = 4
17-03-17 22:59:08.608 -07 000000610 INF: Z Motor: After move to -0.171499, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:08.608 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 22:59:08.608 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:08.608 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:08.608 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:08.608 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:08.608 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:08.608 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:08.608 -07 000000409 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:08.608 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:08.608 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 22:59:08.608 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:08.608 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 22:59:08.608 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:08.618 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:08.618 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:08.618 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:08.618 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:08.628 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 22:59:08.628 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 22:59:08.628 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 22:59:08.628 -07 000000409 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 22:59:08.628 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37641 150\n [Camera]
17-03-17 22:59:08.828 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:09.298 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:09.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:09.298 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:09.298 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:09.298 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 22:59:09.298 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:09.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:09.298 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:09.298 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:09.298 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 22:59:09.488 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37641 849
17-03-17 22:59:09.638 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:09.678 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 22:59:09.678 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 22:59:09.678 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:09.678 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 22:59:09.678 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 22:59:09.678 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:09.688 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:09.688 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 22:59:09.688 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:09.688 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 22:59:09.858 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:09.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:09.868 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:09.868 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:09.868 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 22:59:09.868 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:09.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:09.868 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:09.868 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:09.868 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 22:59:10.058 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:10.058 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:10.058 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37641 150' command took 2 ms to send, 1411 ms to get response, and 1422 ms overall
17-03-17 22:59:10.058 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171864
17-03-17 22:59:10.058 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17186 mm
17-03-17 22:59:10.058 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:10.058 -07 000000541 INF: Z Motor: Entering MoveAbsStepped (DAC = 37544, sync = True, waitForSettling = False)
17-03-17 22:59:10.058 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 22:59:10.058 -07 000000502 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm
17-03-17 22:59:10.058 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:10.058 -07 000000541 INF: Z Motor: Moving to -0.171865 mm, started at -0.171518 mm, distance = -0.35 um
17-03-17 22:59:10.068 -07 000000541 INF: FPGA: Xmit ZDACW 37544\n [Z Motor]
17-03-17 22:59:10.068 -07 000000593 INF: FPGA: Recv YRDPOS 126082
17-03-17 22:59:10.068 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:10.068 -07 000000502 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:10.068 -07 000000502 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:10.068 -07 000000502 INF: Y Motor: Moving 1343 steps-20
17-03-17 22:59:10.068 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 22:59:10.078 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:10.078 -07 000000541 INF: FPGA: 'ZDACW 37544' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 22:59:10.088 -07 000000541 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:10.088 -07 000000576 INF: FPGA: Recv ZDACR 37544
17-03-17 22:59:10.098 -07 000000541 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 22:59:10.098 -07 000000541 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-17 22:59:10.248 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 22:59:10.248 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 22:59:10.248 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:10.248 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 22:59:10.248 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 22:59:10.248 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:10.258 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:10.258 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 22:59:10.258 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 22:59:10.268 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 22:59:10.448 -07 000000409 INF: FPGA: Recv YMVTILE
17-03-17 22:59:10.448 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 22:59:10.498 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:10.508 -07 000000478 INF: FPGA: Recv YRDPOS 127785
17-03-17 22:59:10.508 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 22:59:10.508 -07 000000502 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:10.508 -07 000000502 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 22:59:10.508 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.168 mm/sec
17-03-17 22:59:11.458 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:11.458 -07 000000448 INF: FPGA: Recv YRDPOS 127785
17-03-17 22:59:11.468 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:11.468 -07 000000502 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:11.498 -07 000000502 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:11.498 -07 000000502 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:11.498 -07 000000502 INF: Y Motor: Moved to 62.3950 after 1441 ms (table move)
17-03-17 22:59:11.508 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171865 mm (DAC = 37544)
17-03-17 22:59:11.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.508 -07 000000429 INF: FPGA: Recv ZSGSRD 36044
17-03-17 22:59:11.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 22:59:11.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.518 -07 000000415 INF: FPGA: Recv ZSGSRD 36040
17-03-17 22:59:11.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.528 -07 000000482 INF: FPGA: Recv ZSGSRD 36050
17-03-17 22:59:11.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.538 -07 000000409 INF: FPGA: Recv ZSGSRD 36043
17-03-17 22:59:11.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.548 -07 000000551 INF: FPGA: Recv ZSGSRD 36042
17-03-17 22:59:11.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.558 -07 000000486 INF: FPGA: Recv ZSGSRD 36038
17-03-17 22:59:11.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.568 -07 000000502 INF: FPGA: Recv ZSGSRD 36043
17-03-17 22:59:11.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.578 -07 000000482 INF: FPGA: Recv ZSGSRD 36044
17-03-17 22:59:11.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.588 -07 000000501 INF: FPGA: Recv ZSGSRD 36044
17-03-17 22:59:11.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.598 -07 000000551 INF: FPGA: Recv ZSGSRD 36048
17-03-17 22:59:11.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.608 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:11.608 -07 000000486 INF: FPGA: Recv ZPIEZORD 32093
17-03-17 22:59:11.618 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.618 -07 000000610 INF: Z Motor: Piezo is near 48.6 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.729 V. Piezo Error = -8.7 V.
17-03-17 22:59:11.618 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36044 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36044 (-171.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36038 (-171.0 uncal um), Max = 36050 (-171.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 22:59:11.618 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36044, posNoise = 6, negNoise = 6
17-03-17 22:59:11.618 -07 000000610 INF: Z Motor: After move to -0.171865, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:11.618 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 106 ms (allowed 150 ms), total time = 1552 ms
17-03-17 22:59:11.618 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:11.668 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms
17-03-17 22:59:11.668 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:11.668 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.171877654448767. ----------
17-03-17 22:59:11.668 -07 000000610 INF: Cycle	70	Tile	4	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:11.668 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37367, sync = True, waitForSettling = True)
17-03-17 22:59:11.668 -07 000000610 INF: Z Motor: Moving to -0.171055 mm, started at -0.171878 mm, distance = 0.82 um
17-03-17 22:59:11.668 -07 000000610 INF: FPGA: Xmit ZDACW 37367\n [Z Motor]
17-03-17 22:59:11.668 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 22:59:11.678 -07 000000610 INF: FPGA: 'ZDACW 37367' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:11.678 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:11.678 -07 000000547 INF: FPGA: Recv ZDACR 37367
17-03-17 22:59:11.688 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.688 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:11.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.838 -07 000000478 INF: FPGA: Recv ZSGSRD 35919
17-03-17 22:59:11.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:11.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.848 -07 000000475 INF: FPGA: Recv ZSGSRD 35918
17-03-17 22:59:11.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.858 -07 000000627 INF: FPGA: Recv ZSGSRD 35915
17-03-17 22:59:11.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.868 -07 000000502 INF: FPGA: Recv ZSGSRD 35917
17-03-17 22:59:11.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.878 -07 000000593 INF: FPGA: Recv ZSGSRD 35917
17-03-17 22:59:11.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.888 -07 000000618 INF: FPGA: Recv ZSGSRD 35920
17-03-17 22:59:11.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.898 -07 000000475 INF: FPGA: Recv ZSGSRD 35923
17-03-17 22:59:11.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.908 -07 000000409 INF: FPGA: Recv ZSGSRD 35916
17-03-17 22:59:11.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.918 -07 000000382 INF: FPGA: Recv ZSGSRD 35915
17-03-17 22:59:11.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:11.928 -07 000000541 INF: FPGA: Recv ZSGSRD 35919
17-03-17 22:59:11.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.938 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:11.938 -07 000000448 INF: FPGA: Recv ZPIEZORD 31919
17-03-17 22:59:11.948 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:11.948 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.702 V. Piezo Error = -8.8 V.
17-03-17 22:59:11.948 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35918 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35918 (-170.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35915 (-170.2 uncal um), Max = 35923 (-170.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 22:59:11.948 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35918, posNoise = 5, negNoise = 3
17-03-17 22:59:11.948 -07 000000610 INF: Z Motor: After move to -0.171055, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:11.948 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 22:59:11.948 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:11.948 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:11.948 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:11.948 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:11.948 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:11.948 -07 000000623 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:11.948 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:11.948 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:11.948 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 22:59:11.948 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:11.948 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 22:59:11.948 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:11.958 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:11.958 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:11.958 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:11.958 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:11.958 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 22:59:11.958 -07 000000623 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 22:59:11.968 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 22:59:11.968 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 22:59:11.968 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37544 150\n [Camera]
17-03-17 22:59:12.028 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:12.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:12.168 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:12.628 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:12.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:12.628 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:12.628 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:12.628 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 22:59:12.628 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:12.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:12.638 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:12.638 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:12.638 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 22:59:12.818 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37544 849
17-03-17 22:59:12.968 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:13.008 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 22:59:13.008 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 22:59:13.008 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:13.008 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 22:59:13.008 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 22:59:13.008 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:13.018 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:13.018 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 22:59:13.018 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:13.028 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-17 22:59:13.198 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:13.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:13.198 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:13.198 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:13.198 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 22:59:13.198 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:13.198 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:13.198 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:13.198 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:13.198 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 22:59:13.388 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:13.388 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:13.388 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37544 150' command took 2 ms to send, 1414 ms to get response, and 1421 ms overall
17-03-17 22:59:13.388 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171590
17-03-17 22:59:13.388 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17159 mm
17-03-17 22:59:13.388 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:13.388 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 22:59:13.388 -07 000000576 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-17 22:59:13.388 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:13.388 -07 000000482 INF: Z Motor: Entering MoveAbsStepped (DAC = 37484, sync = True, waitForSettling = False)
17-03-17 22:59:13.388 -07 000000482 INF: Z Motor: Moving to -0.171591 mm, started at -0.171068 mm, distance = -0.52 um
17-03-17 22:59:13.398 -07 000000482 INF: FPGA: Xmit ZDACW 37484\n [Z Motor]
17-03-17 22:59:13.398 -07 000000462 INF: FPGA: Recv YRDPOS 127785
17-03-17 22:59:13.398 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:13.398 -07 000000576 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:13.398 -07 000000576 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:13.398 -07 000000576 INF: Y Motor: Moving 1340 steps-16
17-03-17 22:59:13.398 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 22:59:13.408 -07 000000482 INF: FPGA: 'ZDACW 37484' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:13.408 -07 000000482 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:13.408 -07 000000618 INF: FPGA: Recv ZDACR 37484
17-03-17 22:59:13.418 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:13.418 -07 000000482 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:13.418 -07 000000482 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 22:59:13.588 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 22:59:13.588 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 22:59:13.588 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:13.588 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 390 ms.
17-03-17 22:59:13.588 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 22:59:13.588 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:13.588 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:13.588 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:13.588 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 22:59:13.598 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 22:59:13.748 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.977204,
17-03-17 22:59:13.798 -07 000000482 INF: FPGA: Recv YMVTILE
17-03-17 22:59:13.798 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 398 ms overall
17-03-17 22:59:13.838 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:13.838 -07 000000415 INF: FPGA: Recv YRDPOS 129481
17-03-17 22:59:13.848 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:13.848 -07 000000576 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:13.848 -07 000000576 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 22:59:13.848 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.104 mm/sec
17-03-17 22:59:14.798 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:14.798 -07 000000502 INF: FPGA: Recv YRDPOS 129482
17-03-17 22:59:14.808 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:14.808 -07 000000576 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:14.828 -07 000000576 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:14.828 -07 000000576 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 22:59:14.828 -07 000000576 INF: Y Motor: Moved to 63.2236 after 1437 ms (table move)
17-03-17 22:59:14.828 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171591 mm (DAC = 37484)
17-03-17 22:59:14.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.838 -07 000000462 INF: FPGA: Recv ZSGSRD 35999
17-03-17 22:59:14.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 22:59:14.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.838 -07 000000623 INF: FPGA: Recv ZSGSRD 36006
17-03-17 22:59:14.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:14.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.848 -07 000000501 INF: FPGA: Recv ZSGSRD 36000
17-03-17 22:59:14.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.858 -07 000000502 INF: FPGA: Recv ZSGSRD 35998
17-03-17 22:59:14.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.868 -07 000000541 INF: FPGA: Recv ZSGSRD 35996
17-03-17 22:59:14.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.878 -07 000000547 INF: FPGA: Recv ZSGSRD 35998
17-03-17 22:59:14.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.888 -07 000000478 INF: FPGA: Recv ZSGSRD 36001
17-03-17 22:59:14.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.898 -07 000000482 INF: FPGA: Recv ZSGSRD 35999
17-03-17 22:59:14.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.908 -07 000000409 INF: FPGA: Recv ZSGSRD 36005
17-03-17 22:59:14.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:14.918 -07 000000541 INF: FPGA: Recv ZSGSRD 35997
17-03-17 22:59:14.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:14.928 -07 000000448 INF: FPGA: Recv ZPIEZORD 32058
17-03-17 22:59:14.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:14.938 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.720 V. Piezo Error = -8.7 V.
17-03-17 22:59:14.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 36000 (-170.7 uncal um), Error = 0.9 uncal um, Median = 35999 (-170.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35996 (-170.7 uncal um), Max = 36006 (-170.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:14.938 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36000, posNoise = 6, negNoise = 4
17-03-17 22:59:14.938 -07 000000610 INF: Z Motor: After move to -0.171591, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:14.938 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 102 ms (allowed 150 ms), total time = 1541 ms
17-03-17 22:59:14.938 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:14.988 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-17 22:59:14.988 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:14.988 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.171594989114529. ----------
17-03-17 22:59:14.988 -07 000000610 INF: Cycle	70	Tile	5	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:14.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37307, sync = True, waitForSettling = True)
17-03-17 22:59:14.988 -07 000000610 INF: Z Motor: Moving to -0.170780 mm, started at -0.171595 mm, distance = 0.81 um
17-03-17 22:59:14.988 -07 000000610 INF: FPGA: Xmit ZDACW 37307\n [Z Motor]
17-03-17 22:59:14.988 -07 000000478 INF: FPGA: Recv ZDACW
17-03-17 22:59:14.998 -07 000000610 INF: FPGA: 'ZDACW 37307' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:59:14.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:14.998 -07 000000593 INF: FPGA: Recv ZDACR 37307
17-03-17 22:59:15.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:15.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.158 -07 000000462 INF: FPGA: Recv ZSGSRD 35874
17-03-17 22:59:15.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:15.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.168 -07 000000541 INF: FPGA: Recv ZSGSRD 35879
17-03-17 22:59:15.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.178 -07 000000415 INF: FPGA: Recv ZSGSRD 35871
17-03-17 22:59:15.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.188 -07 000000409 INF: FPGA: Recv ZSGSRD 35875
17-03-17 22:59:15.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.198 -07 000000593 INF: FPGA: Recv ZSGSRD 35877
17-03-17 22:59:15.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.208 -07 000000502 INF: FPGA: Recv ZSGSRD 35875
17-03-17 22:59:15.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.218 -07 000000541 INF: FPGA: Recv ZSGSRD 35867
17-03-17 22:59:15.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.228 -07 000000429 INF: FPGA: Recv ZSGSRD 35874
17-03-17 22:59:15.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.238 -07 000000478 INF: FPGA: Recv ZSGSRD 35880
17-03-17 22:59:15.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:15.248 -07 000000501 INF: FPGA: Recv ZSGSRD 35879
17-03-17 22:59:15.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:15.258 -07 000000462 INF: FPGA: Recv ZPIEZORD 31867
17-03-17 22:59:15.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:15.268 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.693 V. Piezo Error = -8.9 V.
17-03-17 22:59:15.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.8 um, Read 10 ADC samples: Avg = 35875 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35875 (-169.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35867 (-169.9 uncal um), Max = 35880 (-169.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 22:59:15.268 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35875, posNoise = 5, negNoise = 8
17-03-17 22:59:15.268 -07 000000610 INF: Z Motor: After move to -0.170780, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:15.268 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 22:59:15.268 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:15.268 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:15.268 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:15.268 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:15.268 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:15.268 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:15.268 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:15.268 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:15.268 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 22:59:15.268 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:15.268 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:15.268 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:15.278 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:15.278 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:15.278 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:15.278 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:15.288 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 22:59:15.288 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 22:59:15.288 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 22:59:15.288 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 22:59:15.288 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37484 150\n [Camera]
17-03-17 22:59:15.488 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:15.958 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:15.958 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:15.958 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:15.958 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:15.958 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:15.958 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:15.958 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-17 22:59:15.958 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:15.958 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:15.958 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-17 22:59:16.148 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37484 849
17-03-17 22:59:16.298 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:16.348 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 22:59:16.348 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 22:59:16.348 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:16.348 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 22:59:16.348 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 22:59:16.348 -07 000000478 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:16.348 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:16.348 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:16.348 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 22:59:16.358 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 22:59:16.518 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:16.518 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:16.528 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:16.528 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:16.528 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-17 22:59:16.528 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:16.528 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:16.528 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:16.528 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:16.528 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-17 22:59:16.718 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 22:59:16.718 -07 000000478 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:16.718 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37484 150' command took 2 ms to send, 1411 ms to get response, and 1421 ms overall
17-03-17 22:59:16.718 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.171122
17-03-17 22:59:16.718 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17112 mm
17-03-17 22:59:16.718 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:16.718 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 22:59:16.718 -07 000000448 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-17 22:59:16.718 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:16.718 -07 000000623 INF: Z Motor: Entering MoveAbsStepped (DAC = 37382, sync = True, waitForSettling = False)
17-03-17 22:59:16.718 -07 000000623 INF: Z Motor: Moving to -0.171124 mm, started at -0.170792 mm, distance = -0.33 um
17-03-17 22:59:16.718 -07 000000547 INF: FPGA: Recv YRDPOS 129482
17-03-17 22:59:16.728 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:16.728 -07 000000448 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:16.728 -07 000000448 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:16.728 -07 000000448 INF: Y Motor: Moving 1342 steps-19
17-03-17 22:59:16.728 -07 000000623 INF: FPGA: Xmit ZDACW 37382\n [Z Motor]
17-03-17 22:59:16.728 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 22:59:16.738 -07 000000623 INF: FPGA: 'ZDACW 37382' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:16.738 -07 000000623 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:16.738 -07 000000547 INF: FPGA: Recv ZDACR 37382
17-03-17 22:59:16.748 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:16.748 -07 000000623 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:16.748 -07 000000623 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 22:59:16.898 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 22:59:16.898 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 22:59:16.898 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:16.908 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 22:59:16.908 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 22:59:16.908 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:16.908 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:16.908 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:16.908 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 22:59:16.918 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 22:59:17.028 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:17.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:17.118 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 22:59:17.118 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 22:59:17.158 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:17.168 -07 000000409 INF: FPGA: Recv YRDPOS 131187
17-03-17 22:59:17.178 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:17.178 -07 000000448 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:17.178 -07 000000448 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-17 22:59:17.178 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.113 mm/sec
17-03-17 22:59:18.128 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:18.128 -07 000000475 INF: FPGA: Recv YRDPOS 131188
17-03-17 22:59:18.138 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.138 -07 000000448 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:18.158 -07 000000448 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:18.158 -07 000000448 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 22:59:18.158 -07 000000448 INF: Y Motor: Moved to 64.0566 after 1438 ms (table move)
17-03-17 22:59:18.158 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171124 mm (DAC = 37382)
17-03-17 22:59:18.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.168 -07 000000576 INF: FPGA: Recv ZSGSRD 35924
17-03-17 22:59:18.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:18.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.168 -07 000000462 INF: FPGA: Recv ZSGSRD 35926
17-03-17 22:59:18.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.178 -07 000000618 INF: FPGA: Recv ZSGSRD 35936
17-03-17 22:59:18.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.188 -07 000000547 INF: FPGA: Recv ZSGSRD 35932
17-03-17 22:59:18.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.198 -07 000000623 INF: FPGA: Recv ZSGSRD 35936
17-03-17 22:59:18.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.208 -07 000000409 INF: FPGA: Recv ZSGSRD 35925
17-03-17 22:59:18.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.218 -07 000000502 INF: FPGA: Recv ZSGSRD 35928
17-03-17 22:59:18.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.228 -07 000000429 INF: FPGA: Recv ZSGSRD 35926
17-03-17 22:59:18.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.238 -07 000000627 INF: FPGA: Recv ZSGSRD 35928
17-03-17 22:59:18.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.248 -07 000000448 INF: FPGA: Recv ZSGSRD 35931
17-03-17 22:59:18.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:18.258 -07 000000501 INF: FPGA: Recv ZPIEZORD 31945
17-03-17 22:59:18.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.268 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.704 V. Piezo Error = -8.8 V.
17-03-17 22:59:18.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35929 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35928 (-170.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35924 (-170.2 uncal um), Max = 35936 (-170.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:18.268 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35929, posNoise = 7, negNoise = 5
17-03-17 22:59:18.268 -07 000000610 INF: Z Motor: After move to -0.171124, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:18.268 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 106 ms (allowed 150 ms), total time = 1543 ms
17-03-17 22:59:18.268 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:18.318 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-17 22:59:18.318 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:18.318 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.171138870052464. ----------
17-03-17 22:59:18.318 -07 000000610 INF: Cycle	70	Tile	6	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:18.318 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37205, sync = True, waitForSettling = True)
17-03-17 22:59:18.318 -07 000000610 INF: Z Motor: Moving to -0.170314 mm, started at -0.171139 mm, distance = 0.83 um
17-03-17 22:59:18.318 -07 000000610 INF: FPGA: Xmit ZDACW 37205\n [Z Motor]
17-03-17 22:59:18.318 -07 000000462 INF: FPGA: Recv ZDACW
17-03-17 22:59:18.328 -07 000000610 INF: FPGA: 'ZDACW 37205' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 22:59:18.328 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:18.328 -07 000000409 INF: FPGA: Recv ZDACR 37205
17-03-17 22:59:18.338 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.338 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:18.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.488 -07 000000576 INF: FPGA: Recv ZSGSRD 35804
17-03-17 22:59:18.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:18.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.498 -07 000000623 INF: FPGA: Recv ZSGSRD 35806
17-03-17 22:59:18.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.508 -07 000000593 INF: FPGA: Recv ZSGSRD 35806
17-03-17 22:59:18.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.518 -07 000000448 INF: FPGA: Recv ZSGSRD 35800
17-03-17 22:59:18.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.528 -07 000000409 INF: FPGA: Recv ZSGSRD 35806
17-03-17 22:59:18.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.538 -07 000000415 INF: FPGA: Recv ZSGSRD 35802
17-03-17 22:59:18.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.548 -07 000000382 INF: FPGA: Recv ZSGSRD 35803
17-03-17 22:59:18.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.558 -07 000000501 INF: FPGA: Recv ZSGSRD 35803
17-03-17 22:59:18.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.568 -07 000000478 INF: FPGA: Recv ZSGSRD 35803
17-03-17 22:59:18.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:18.578 -07 000000482 INF: FPGA: Recv ZSGSRD 35805
17-03-17 22:59:18.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.588 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:18.588 -07 000000475 INF: FPGA: Recv ZPIEZORD 31756
17-03-17 22:59:18.598 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:18.598 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.677 V. Piezo Error = -8.9 V.
17-03-17 22:59:18.598 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.3 um, Read 10 ADC samples: Avg = 35804 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35804 (-169.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35800 (-169.4 uncal um), Max = 35806 (-169.5 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:18.598 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35804, posNoise = 2, negNoise = 4
17-03-17 22:59:18.598 -07 000000610 INF: Z Motor: After move to -0.170314, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:18.598 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 22:59:18.598 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:18.598 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:18.598 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:18.598 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:18.598 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:18.598 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:18.598 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:18.598 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:18.598 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:18.598 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:18.598 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:18.598 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:18.608 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:18.608 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:18.608 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:18.608 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:18.618 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 22:59:18.618 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 22:59:18.618 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 22:59:18.618 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:18.618 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37382 150\n [Camera]
17-03-17 22:59:18.818 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:19.108 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.016692,
17-03-17 22:59:19.288 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:19.288 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:19.288 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:19.288 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:19.288 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-17 22:59:19.288 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:19.288 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:19.288 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:19.288 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:19.288 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-17 22:59:19.478 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37382 849
17-03-17 22:59:19.628 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:19.678 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 22:59:19.678 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 22:59:19.678 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:19.678 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 22:59:19.678 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 22:59:19.678 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:19.678 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:19.678 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:19.678 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-17 22:59:19.688 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 22:59:19.848 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:19.848 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:19.858 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:19.858 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:19.858 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-17 22:59:19.858 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:19.858 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:19.858 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:19.858 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:19.858 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-17 22:59:20.048 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:20.048 -07 000000482 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:20.048 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37382 150' command took 2 ms to send, 1411 ms to get response, and 1421 ms overall
17-03-17 22:59:20.048 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 22:59:20.048 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.056640625, Z-Position -0.170335843534744. ------
17-03-17 22:59:20.048 -07 000000409 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17682 mm
17-03-17 22:59:20.048 -07 000000409 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:20.048 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:20.058 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 38626, sync = True, waitForSettling = False)
17-03-17 22:59:20.058 -07 000000593 INF: Z Motor: Moving to -0.176818 mm, started at -0.170336 mm, distance = -6.48 um
17-03-17 22:59:20.058 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:20.058 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 22:59:20.058 -07 000000593 INF: FPGA: Xmit ZDACW 38626\n [Z Motor]
17-03-17 22:59:20.058 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 22:59:20.058 -07 000000448 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-17 22:59:20.058 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 22:59:20.068 -07 000000593 INF: FPGA: 'ZDACW 38626' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 22:59:20.068 -07 000000429 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 22:59:20.078 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:20.078 -07 000000486 INF: FPGA: Recv YRDPOS 131188
17-03-17 22:59:20.088 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:20.088 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-17 22:59:20.088 -07 000000448 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:20.088 -07 000000448 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:20.088 -07 000000448 INF: Y Motor: Moving 1338 steps-13
17-03-17 22:59:20.088 -07 000000623 INF: FPGA: Recv ZDACR 38626
17-03-17 22:59:20.098 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:20.098 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:20.098 -07 000000593 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-17 22:59:20.238 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 22:59:20.238 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 22:59:20.238 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:20.238 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 22:59:20.238 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 22:59:20.238 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:20.238 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:20.248 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 22:59:20.248 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 22:59:20.248 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 22:59:20.268 -07 000000576 INF: FPGA: Recv FOCMRRFOC
17-03-17 22:59:20.268 -07 000000429 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 209 ms overall
17-03-17 22:59:20.468 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 22:59:20.468 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 22:59:20.518 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:20.518 -07 000000429 INF: FPGA: Recv YRDPOS 132871
17-03-17 22:59:20.528 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:20.528 -07 000000448 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:20.528 -07 000000448 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 22:59:20.528 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.836 mm, average velocity = 2.160 mm/sec
17-03-17 22:59:21.478 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:21.478 -07 000000593 INF: FPGA: Recv YRDPOS 132871
17-03-17 22:59:21.488 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:21.488 -07 000000448 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:21.508 -07 000000448 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:21.508 -07 000000448 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:21.508 -07 000000448 INF: Y Motor: Moved to 64.8784 after 1453 ms (table move)
17-03-17 22:59:21.518 -07 000000409 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176818 mm (DAC = 38626)
17-03-17 22:59:21.518 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.518 -07 000000547 INF: FPGA: Recv ZSGSRD 36813
17-03-17 22:59:21.528 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.528 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.528 -07 000000593 INF: FPGA: Recv ZSGSRD 36821
17-03-17 22:59:21.538 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.538 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.548 -07 000000541 INF: FPGA: Recv ZSGSRD 36810
17-03-17 22:59:21.548 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:21.548 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.548 -07 000000551 INF: FPGA: Recv ZSGSRD 36820
17-03-17 22:59:21.558 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.558 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.558 -07 000000415 INF: FPGA: Recv ZSGSRD 36812
17-03-17 22:59:21.568 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.568 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.568 -07 000000482 INF: FPGA: Recv ZSGSRD 36810
17-03-17 22:59:21.578 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.578 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.578 -07 000000486 INF: FPGA: Recv ZSGSRD 36815
17-03-17 22:59:21.588 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.588 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.588 -07 000000501 INF: FPGA: Recv ZSGSRD 36811
17-03-17 22:59:21.598 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.598 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.598 -07 000000551 INF: FPGA: Recv ZSGSRD 36812
17-03-17 22:59:21.608 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.608 -07 000000409 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:21.608 -07 000000475 INF: FPGA: Recv ZSGSRD 36818
17-03-17 22:59:21.618 -07 000000409 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.618 -07 000000409 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:21.618 -07 000000547 INF: FPGA: Recv ZPIEZORD 33101
17-03-17 22:59:21.628 -07 000000409 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:21.628 -07 000000409 INF: Z Motor: Piezo is near 50.7 V (nominally 0 to 100 V), expect near 58.9 V, since DAC is at 5.894 V. Piezo Error = -8.2 V.
17-03-17 22:59:21.628 -07 000000409 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.8 um, Read 10 ADC samples: Avg = 36814 (-175.9 uncal um), Error = 0.9 uncal um, Median = 36812 (-175.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36810 (-175.9 uncal um), Max = 36821 (-176.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:21.628 -07 000000409 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36814, posNoise = 7, negNoise = 4
17-03-17 22:59:21.628 -07 000000409 INF: Z Motor: After move to -0.176818, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:21.628 -07 000000409 INF: Z Motor: Settle wait time = 1458 ms, measure time = 110 ms (allowed 150 ms), total time = 1568 ms
17-03-17 22:59:21.628 -07 000000409 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:21.668 -07 000000409 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-17 22:59:21.668 -07 000000409 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:21.668 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:21.668 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:21.668 -07 000000486 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:21.668 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:21.668 -07 000000415 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 22:59:21.668 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:21.668 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:21.668 -07 000000415 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 22:59:21.678 -07 000000415 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:21.678 -07 000000415 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 22:59:21.688 -07 000000415 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 22:59:21.688 -07 000000415 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 22:59:21.688 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 22:59:21.738 -07 000000478 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 22:59:21.938 -07 000000429 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 22:59:21.938 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 22:59:21.938 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 22:59:21.938 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2268430664, 0x0, 559484976) start.
17-03-17 22:59:21.968 -07 000000415 INF: FPGA: Recv @CAMSNAP 280
17-03-17 22:59:21.978 -07 000000593 INF: FPGA: Recv CAMSNAP
17-03-17 22:59:21.978 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 285 ms overall
17-03-17 22:59:22.028 -07 000000547 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:22.058 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2268430664, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 22:59:22.058 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:22.058 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 22:59:22.058 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-17 22:59:22.068 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:22.078 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:22.078 -07 000000593 INF: Autofocus start
17-03-17 22:59:22.078 -07 000000593 INF: MeasureProfile start
17-03-17 22:59:22.078 -07 000000486 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:22.088 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:59:22.088 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 22:59:22.088 -07 000000593 INF: MeasureProfile done
17-03-17 22:59:22.088 -07 000000593 INF: X=16  Z correction [um]=0.01042744
17-03-17 22:59:22.088 -07 000000593 INF: Autofocus finished
17-03-17 22:59:22.288 -07 000000547 INF: FPGA: Recv FOCMRRIMG
17-03-17 22:59:22.288 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 22:59:22.288 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.176824297797923. ----------
17-03-17 22:59:22.288 -07 000000610 INF: Cycle	70	Tile	7	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:22.298 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37141, sync = True, waitForSettling = True)
17-03-17 22:59:22.298 -07 000000610 INF: Z Motor: Moving to -0.170021 mm, started at -0.176824 mm, distance = 6.80 um
17-03-17 22:59:22.298 -07 000000610 INF: FPGA: Xmit ZDACW 37141\n [Z Motor]
17-03-17 22:59:22.298 -07 000000593 INF: FPGA: Recv ZDACW
17-03-17 22:59:22.308 -07 000000610 INF: FPGA: 'ZDACW 37141' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.308 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:22.308 -07 000000382 INF: FPGA: Recv ZDACR 37141
17-03-17 22:59:22.318 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.318 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:22.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.468 -07 000000415 INF: FPGA: Recv ZSGSRD 35759
17-03-17 22:59:22.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:22.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.478 -07 000000547 INF: FPGA: Recv ZSGSRD 35763
17-03-17 22:59:22.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.488 -07 000000541 INF: FPGA: Recv ZSGSRD 35753
17-03-17 22:59:22.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.498 -07 000000486 INF: FPGA: Recv ZSGSRD 35759
17-03-17 22:59:22.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.508 -07 000000382 INF: FPGA: Recv ZSGSRD 35751
17-03-17 22:59:22.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.518 -07 000000475 INF: FPGA: Recv ZSGSRD 35757
17-03-17 22:59:22.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.528 -07 000000478 INF: FPGA: Recv ZSGSRD 35758
17-03-17 22:59:22.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:22.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.538 -07 000000415 INF: FPGA: Recv ZSGSRD 35754
17-03-17 22:59:22.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.548 -07 000000486 INF: FPGA: Recv ZSGSRD 35758
17-03-17 22:59:22.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:22.558 -07 000000541 INF: FPGA: Recv ZSGSRD 35754
17-03-17 22:59:22.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.568 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:22.568 -07 000000409 INF: FPGA: Recv ZPIEZORD 31687
17-03-17 22:59:22.578 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:22.578 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.667 V. Piezo Error = -9.0 V.
17-03-17 22:59:22.578 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.0 um, Read 10 ADC samples: Avg = 35757 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35758 (-169.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35751 (-169.1 uncal um), Max = 35763 (-169.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 22:59:22.578 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35757, posNoise = 6, negNoise = 6
17-03-17 22:59:22.578 -07 000000610 INF: Z Motor: After move to -0.170021, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:22.578 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 22:59:22.578 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:22.578 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:22.578 -07 000000551 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:22.578 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:22.578 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:22.578 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:22.578 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:22.578 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:22.578 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 22:59:22.578 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:22.578 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:22.578 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:22.588 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:22.588 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:22.588 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:22.588 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:22.588 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 22:59:22.588 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 22:59:22.598 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 22:59:22.598 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 22:59:22.598 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37318 150\n [Camera]
17-03-17 22:59:22.798 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:23.258 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:23.258 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:23.258 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:23.258 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:23.258 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-17 22:59:23.268 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:23.268 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:23.268 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:23.268 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:23.268 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-17 22:59:23.458 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37318 849
17-03-17 22:59:23.598 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:23.638 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 22:59:23.638 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 22:59:23.638 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:23.648 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:23.648 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 22:59:23.648 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 22:59:23.648 -07 000000478 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:23.648 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:23.648 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 22:59:23.648 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 22:59:23.828 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:23.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:23.828 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:23.828 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:23.828 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-17 22:59:23.828 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:23.828 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:23.828 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:23.828 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:23.828 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-17 22:59:24.018 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:24.018 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:24.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37318 150' command took 2 ms to send, 1415 ms to get response, and 1421 ms overall
17-03-17 22:59:24.298 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 473 ms.
17-03-17 22:59:24.298 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 473 ms.
17-03-17 22:59:24.298 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:24.298 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 470 ms.
17-03-17 22:59:24.298 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 471 ms.
17-03-17 22:59:24.298 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:24.298 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170657
17-03-17 22:59:24.308 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17066 mm
17-03-17 22:59:24.308 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:24.308 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:24.308 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-17 22:59:24.308 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 482 ms.
17-03-17 22:59:24.308 -07 000000593 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 22:59:24.308 -07 000000593 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-17 22:59:24.308 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:24.308 -07 000000541 INF: Z Motor: Entering MoveAbsStepped (DAC = 37280, sync = True, waitForSettling = False)
17-03-17 22:59:24.308 -07 000000541 INF: Z Motor: Moving to -0.170657 mm, started at -0.170034 mm, distance = -0.62 um
17-03-17 22:59:24.318 -07 000000541 INF: FPGA: Xmit ZDACW 37280\n [Z Motor]
17-03-17 22:59:24.318 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 484 ms.
17-03-17 22:59:24.318 -07 000000482 INF: FPGA: Recv YRDPOS 132871
17-03-17 22:59:24.318 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 5 ms overall
17-03-17 22:59:24.318 -07 000000593 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:24.318 -07 000000593 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:24.318 -07 000000593 INF: Y Motor: Moving 1351 steps-29
17-03-17 22:59:24.318 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 22:59:24.328 -07 000000541 INF: FPGA: 'ZDACW 37280' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 22:59:24.328 -07 000000541 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:24.328 -07 000000475 INF: FPGA: Recv ZDACR 37280
17-03-17 22:59:24.338 -07 000000593 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:24.338 -07 000000541 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:24.338 -07 000000541 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-17 22:59:24.618 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.023489,
17-03-17 22:59:24.718 -07 000000482 INF: FPGA: Recv YMVTILE
17-03-17 22:59:24.718 -07 000000593 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 398 ms overall
17-03-17 22:59:24.758 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:24.758 -07 000000627 INF: FPGA: Recv YRDPOS 134581
17-03-17 22:59:24.768 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:24.768 -07 000000593 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:24.768 -07 000000593 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 22:59:24.768 -07 000000593 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.121 mm/sec
17-03-17 22:59:25.718 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:25.718 -07 000000409 INF: FPGA: Recv YRDPOS 134581
17-03-17 22:59:25.728 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:25.728 -07 000000593 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:25.758 -07 000000593 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:25.758 -07 000000593 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:25.758 -07 000000593 INF: Y Motor: Moved to 65.7134 after 1444 ms (table move)
17-03-17 22:59:25.758 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170657 mm (DAC = 37280)
17-03-17 22:59:25.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.758 -07 000000547 INF: FPGA: Recv ZSGSRD 35854
17-03-17 22:59:25.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:59:25.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.768 -07 000000478 INF: FPGA: Recv ZSGSRD 35860
17-03-17 22:59:25.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.778 -07 000000486 INF: FPGA: Recv ZSGSRD 35854
17-03-17 22:59:25.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.788 -07 000000462 INF: FPGA: Recv ZSGSRD 35858
17-03-17 22:59:25.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.798 -07 000000382 INF: FPGA: Recv ZSGSRD 35852
17-03-17 22:59:25.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.808 -07 000000627 INF: FPGA: Recv ZSGSRD 35849
17-03-17 22:59:25.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.818 -07 000000462 INF: FPGA: Recv ZSGSRD 35856
17-03-17 22:59:25.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:25.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.828 -07 000000502 INF: FPGA: Recv ZSGSRD 35856
17-03-17 22:59:25.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.838 -07 000000462 INF: FPGA: Recv ZSGSRD 35859
17-03-17 22:59:25.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:25.848 -07 000000618 INF: FPGA: Recv ZSGSRD 35859
17-03-17 22:59:25.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.858 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:25.858 -07 000000382 INF: FPGA: Recv ZPIEZORD 31869
17-03-17 22:59:25.868 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.868 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.689 V. Piezo Error = -8.8 V.
17-03-17 22:59:25.868 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.7 um, Read 10 ADC samples: Avg = 35856 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35856 (-169.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35849 (-169.7 uncal um), Max = 35860 (-169.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 22:59:25.868 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35856, posNoise = 4, negNoise = 7
17-03-17 22:59:25.868 -07 000000610 INF: Z Motor: After move to -0.170657, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:25.868 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 107 ms (allowed 150 ms), total time = 1552 ms
17-03-17 22:59:25.868 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:25.918 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-17 22:59:25.918 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:25.918 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.170669902566116. ----------
17-03-17 22:59:25.918 -07 000000610 INF: Cycle	70	Tile	8	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:25.918 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37103, sync = True, waitForSettling = True)
17-03-17 22:59:25.918 -07 000000610 INF: Z Motor: Moving to -0.169847 mm, started at -0.170670 mm, distance = 0.82 um
17-03-17 22:59:25.918 -07 000000610 INF: FPGA: Xmit ZDACW 37103\n [Z Motor]
17-03-17 22:59:25.928 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 22:59:25.938 -07 000000610 INF: FPGA: 'ZDACW 37103' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:25.938 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:25.938 -07 000000462 INF: FPGA: Recv ZDACR 37103
17-03-17 22:59:25.948 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:25.948 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:26.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.098 -07 000000502 INF: FPGA: Recv ZSGSRD 35727
17-03-17 22:59:26.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:26.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.108 -07 000000475 INF: FPGA: Recv ZSGSRD 35731
17-03-17 22:59:26.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.118 -07 000000593 INF: FPGA: Recv ZSGSRD 35732
17-03-17 22:59:26.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.128 -07 000000547 INF: FPGA: Recv ZSGSRD 35727
17-03-17 22:59:26.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.138 -07 000000593 INF: FPGA: Recv ZSGSRD 35730
17-03-17 22:59:26.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.148 -07 000000502 INF: FPGA: Recv ZSGSRD 35729
17-03-17 22:59:26.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.158 -07 000000623 INF: FPGA: Recv ZSGSRD 35738
17-03-17 22:59:26.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.168 -07 000000429 INF: FPGA: Recv ZSGSRD 35731
17-03-17 22:59:26.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.178 -07 000000482 INF: FPGA: Recv ZSGSRD 35730
17-03-17 22:59:26.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:26.188 -07 000000576 INF: FPGA: Recv ZSGSRD 35736
17-03-17 22:59:26.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.198 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:26.198 -07 000000501 INF: FPGA: Recv ZPIEZORD 31650
17-03-17 22:59:26.208 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:26.208 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.662 V. Piezo Error = -9.0 V.
17-03-17 22:59:26.208 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35731 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35730 (-169.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35727 (-169.0 uncal um), Max = 35738 (-169.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:26.208 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35731, posNoise = 7, negNoise = 4
17-03-17 22:59:26.208 -07 000000610 INF: Z Motor: After move to -0.169847, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:26.208 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-17 22:59:26.208 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:26.208 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:26.208 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:26.208 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:26.208 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:26.208 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:26.208 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:26.208 -07 000000541 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:26.208 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:26.208 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:26.208 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:26.208 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:26.218 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:26.218 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:26.218 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:26.218 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:26.228 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 22:59:26.228 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 22:59:26.228 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-17 22:59:26.228 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 22:59:26.228 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37280 150\n [Camera]
17-03-17 22:59:26.428 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:26.898 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:26.898 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:26.898 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:26.898 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:26.898 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:26.898 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:26.908 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:26.908 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-17 22:59:26.908 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:26.908 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-17 22:59:27.028 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:27.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:27.088 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37280 849
17-03-17 22:59:27.238 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:27.278 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 370 ms.
17-03-17 22:59:27.278 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-17 22:59:27.278 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:27.288 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:27.288 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 22:59:27.288 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 22:59:27.288 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:27.288 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:27.288 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 22:59:27.288 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 22:59:27.458 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:27.458 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:27.458 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:27.468 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:27.468 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:27.468 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:27.468 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:27.468 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 22:59:27.468 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:27.468 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-17 22:59:27.648 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 22:59:27.648 -07 000000623 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:27.658 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37280 150' command took 2 ms to send, 1410 ms to get response, and 1421 ms overall
17-03-17 22:59:27.658 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.170195
17-03-17 22:59:27.768 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17019 mm
17-03-17 22:59:27.768 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:27.768 -07 000000486 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 22:59:27.768 -07 000000486 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-17 22:59:27.768 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:27.768 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37179, sync = True, waitForSettling = False)
17-03-17 22:59:27.768 -07 000000502 INF: Z Motor: Moving to -0.170195 mm, started at -0.169867 mm, distance = -0.33 um
17-03-17 22:59:27.778 -07 000000502 INF: FPGA: Xmit ZDACW 37179\n [Z Motor]
17-03-17 22:59:27.778 -07 000000501 INF: FPGA: Recv YRDPOS 134581
17-03-17 22:59:27.778 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:27.778 -07 000000486 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:27.778 -07 000000486 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:27.778 -07 000000486 INF: Y Motor: Moving 1343 steps-19
17-03-17 22:59:27.778 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 22:59:27.788 -07 000000502 INF: FPGA: 'ZDACW 37179' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:27.788 -07 000000486 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:27.798 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:27.798 -07 000000429 INF: FPGA: Recv ZDACR 37179
17-03-17 22:59:27.808 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 22:59:27.808 -07 000000502 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 22:59:27.858 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 22:59:27.858 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 22:59:27.858 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:27.858 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 393 ms.
17-03-17 22:59:27.858 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 22:59:27.858 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:27.868 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:27.868 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 22:59:27.868 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:27.868 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-17 22:59:28.158 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 22:59:28.158 -07 000000486 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-17 22:59:28.198 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:28.208 -07 000000501 INF: FPGA: Recv YRDPOS 136271
17-03-17 22:59:28.208 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 22:59:28.208 -07 000000486 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:28.208 -07 000000486 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 22:59:28.208 -07 000000486 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.839 mm, average velocity = 2.174 mm/sec
17-03-17 22:59:29.158 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:29.158 -07 000000382 INF: FPGA: Recv YRDPOS 136271
17-03-17 22:59:29.168 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:29.168 -07 000000486 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:29.188 -07 000000486 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:29.188 -07 000000486 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:29.188 -07 000000486 INF: Y Motor: Moved to 66.5386 after 1418 ms (table move)
17-03-17 22:59:29.188 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170195 mm (DAC = 37179)
17-03-17 22:59:29.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.198 -07 000000623 INF: FPGA: Recv ZSGSRD 35787
17-03-17 22:59:29.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 22:59:29.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.198 -07 000000501 INF: FPGA: Recv ZSGSRD 35779
17-03-17 22:59:29.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 22:59:29.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.208 -07 000000475 INF: FPGA: Recv ZSGSRD 35784
17-03-17 22:59:29.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.218 -07 000000593 INF: FPGA: Recv ZSGSRD 35789
17-03-17 22:59:29.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.238 -07 000000409 INF: FPGA: Recv ZSGSRD 35789
17-03-17 22:59:29.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 22:59:29.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.238 -07 000000618 INF: FPGA: Recv ZSGSRD 35793
17-03-17 22:59:29.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.248 -07 000000482 INF: FPGA: Recv ZSGSRD 35788
17-03-17 22:59:29.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.258 -07 000000551 INF: FPGA: Recv ZSGSRD 35788
17-03-17 22:59:29.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.268 -07 000000478 INF: FPGA: Recv ZSGSRD 35779
17-03-17 22:59:29.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.278 -07 000000486 INF: FPGA: Recv ZSGSRD 35787
17-03-17 22:59:29.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.288 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:29.288 -07 000000415 INF: FPGA: Recv ZPIEZORD 31755
17-03-17 22:59:29.298 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.298 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.673 V. Piezo Error = -8.9 V.
17-03-17 22:59:29.298 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35786 (-169.3 uncal um), Error = 0.8 uncal um, Median = 35788 (-169.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35779 (-169.3 uncal um), Max = 35793 (-169.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 22:59:29.298 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35786, posNoise = 7, negNoise = 7
17-03-17 22:59:29.298 -07 000000610 INF: Z Motor: After move to -0.170195, error = -0.000026, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:29.298 -07 000000610 INF: Z Motor: Settle wait time = 1419 ms, measure time = 102 ms (allowed 150 ms), total time = 1521 ms
17-03-17 22:59:29.298 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:29.348 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1574 ms
17-03-17 22:59:29.348 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:29.348 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.170220207716193. ----------
17-03-17 22:59:29.348 -07 000000610 INF: Cycle	70	Tile	9	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:29.348 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37002, sync = True, waitForSettling = True)
17-03-17 22:59:29.348 -07 000000610 INF: Z Motor: Moving to -0.169384 mm, started at -0.170220 mm, distance = 0.84 um
17-03-17 22:59:29.348 -07 000000610 INF: FPGA: Xmit ZDACW 37002\n [Z Motor]
17-03-17 22:59:29.358 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 22:59:29.358 -07 000000610 INF: FPGA: 'ZDACW 37002' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 22:59:29.358 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:29.358 -07 000000409 INF: FPGA: Recv ZDACR 37002
17-03-17 22:59:29.368 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.368 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:29.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.518 -07 000000623 INF: FPGA: Recv ZSGSRD 35658
17-03-17 22:59:29.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:29.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.528 -07 000000627 INF: FPGA: Recv ZSGSRD 35663
17-03-17 22:59:29.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.538 -07 000000415 INF: FPGA: Recv ZSGSRD 35661
17-03-17 22:59:29.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.548 -07 000000429 INF: FPGA: Recv ZSGSRD 35654
17-03-17 22:59:29.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.558 -07 000000475 INF: FPGA: Recv ZSGSRD 35657
17-03-17 22:59:29.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.568 -07 000000618 INF: FPGA: Recv ZSGSRD 35657
17-03-17 22:59:29.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.578 -07 000000486 INF: FPGA: Recv ZSGSRD 35657
17-03-17 22:59:29.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.588 -07 000000462 INF: FPGA: Recv ZSGSRD 35653
17-03-17 22:59:29.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.598 -07 000000482 INF: FPGA: Recv ZSGSRD 35656
17-03-17 22:59:29.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:29.608 -07 000000475 INF: FPGA: Recv ZSGSRD 35658
17-03-17 22:59:29.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.618 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:29.618 -07 000000382 INF: FPGA: Recv ZPIEZORD 31569
17-03-17 22:59:29.628 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:29.628 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.646 V. Piezo Error = -9.0 V.
17-03-17 22:59:29.628 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35657 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35657 (-168.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35653 (-168.5 uncal um), Max = 35663 (-168.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:29.628 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35657, posNoise = 6, negNoise = 4
17-03-17 22:59:29.628 -07 000000610 INF: Z Motor: After move to -0.169384, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:29.628 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms)
17-03-17 22:59:29.628 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:29.628 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:29.628 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:29.628 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:29.628 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:29.628 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:29.628 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:29.628 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:29.628 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 22:59:29.628 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:29.628 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms.
17-03-17 22:59:29.628 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:29.638 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:29.638 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:29.638 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:29.638 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:29.648 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 22:59:29.648 -07 000000475 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 22:59:29.648 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 22:59:29.648 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 22:59:29.648 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37179 150\n [Camera]
17-03-17 22:59:29.848 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:29.988 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.99219,
17-03-17 22:59:30.308 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:30.308 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:30.308 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:30.318 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:30.318 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-17 22:59:30.318 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:30.318 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:30.318 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:30.318 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:30.318 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-17 22:59:30.508 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37179 849
17-03-17 22:59:30.648 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:30.688 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 369 ms.
17-03-17 22:59:30.688 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-17 22:59:30.688 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:30.688 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 22:59:30.688 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 22:59:30.688 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:30.698 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:30.698 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:30.698 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 22:59:30.708 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 22:59:30.878 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:30.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:30.878 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:30.878 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:30.878 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 22:59:30.878 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:30.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:30.878 -07 000000478 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:30.878 -07 000000478 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:30.878 -07 000000478 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-17 22:59:31.068 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:31.068 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:31.068 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37179 150' command took 2 ms to send, 1415 ms to get response, and 1421 ms overall
17-03-17 22:59:31.068 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170151
17-03-17 22:59:31.068 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17015 mm
17-03-17 22:59:31.068 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:31.078 -07 000000541 INF: Z Motor: Entering MoveAbsStepped (DAC = 37170, sync = True, waitForSettling = False)
17-03-17 22:59:31.078 -07 000000541 INF: Z Motor: Moving to -0.170153 mm, started at -0.169391 mm, distance = -0.76 um
17-03-17 22:59:31.078 -07 000000541 INF: FPGA: Xmit ZDACW 37170\n [Z Motor]
17-03-17 22:59:31.078 -07 000000482 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 22:59:31.078 -07 000000482 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-17 22:59:31.078 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 22:59:31.088 -07 000000541 INF: FPGA: 'ZDACW 37170' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:31.088 -07 000000541 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:31.088 -07 000000475 INF: FPGA: Recv ZDACR 37170
17-03-17 22:59:31.098 -07 000000541 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:31.098 -07 000000541 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-17 22:59:31.098 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:31.098 -07 000000627 INF: FPGA: Recv YRDPOS 136271
17-03-17 22:59:31.108 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 22:59:31.108 -07 000000482 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:31.108 -07 000000482 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:31.108 -07 000000482 INF: Y Motor: Moving 1350 steps-29
17-03-17 22:59:31.108 -07 000000482 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:31.258 -07 000000478 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 22:59:31.258 -07 000000478 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-17 22:59:31.258 -07 000000478 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:31.268 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 22:59:31.268 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 22:59:31.268 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:31.268 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:31.268 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:31.268 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 22:59:31.278 -07 000000478 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 22:59:31.488 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 22:59:31.488 -07 000000482 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 378 ms overall
17-03-17 22:59:31.528 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:31.528 -07 000000409 INF: FPGA: Recv YRDPOS 137977
17-03-17 22:59:31.538 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:31.538 -07 000000482 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:31.538 -07 000000482 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-17 22:59:31.538 -07 000000482 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 380 ms, distance = 0.844 mm, average velocity = 2.221 mm/sec
17-03-17 22:59:32.028 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:32.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:32.488 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:32.488 -07 000000618 INF: FPGA: Recv YRDPOS 137977
17-03-17 22:59:32.498 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:32.498 -07 000000482 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:32.518 -07 000000482 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:32.518 -07 000000482 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:32.518 -07 000000482 INF: Y Motor: Moved to 67.3716 after 1444 ms (table move)
17-03-17 22:59:32.518 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170153 mm (DAC = 37170)
17-03-17 22:59:32.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.528 -07 000000627 INF: FPGA: Recv ZSGSRD 35773
17-03-17 22:59:32.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 22:59:32.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.528 -07 000000415 INF: FPGA: Recv ZSGSRD 35780
17-03-17 22:59:32.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:32.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.538 -07 000000502 INF: FPGA: Recv ZSGSRD 35769
17-03-17 22:59:32.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.548 -07 000000501 INF: FPGA: Recv ZSGSRD 35771
17-03-17 22:59:32.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.558 -07 000000382 INF: FPGA: Recv ZSGSRD 35776
17-03-17 22:59:32.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.568 -07 000000551 INF: FPGA: Recv ZSGSRD 35781
17-03-17 22:59:32.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.578 -07 000000409 INF: FPGA: Recv ZSGSRD 35781
17-03-17 22:59:32.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.588 -07 000000547 INF: FPGA: Recv ZSGSRD 35783
17-03-17 22:59:32.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.598 -07 000000618 INF: FPGA: Recv ZSGSRD 35783
17-03-17 22:59:32.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.608 -07 000000482 INF: FPGA: Recv ZSGSRD 35777
17-03-17 22:59:32.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.618 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:32.618 -07 000000551 INF: FPGA: Recv ZPIEZORD 31745
17-03-17 22:59:32.628 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.628 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.672 V. Piezo Error = -8.9 V.
17-03-17 22:59:32.628 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35777 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35778 (-169.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35769 (-169.2 uncal um), Max = 35783 (-169.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 22:59:32.628 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35777, posNoise = 6, negNoise = 8
17-03-17 22:59:32.628 -07 000000610 INF: Z Motor: After move to -0.170153, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:32.628 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 103 ms (allowed 150 ms), total time = 1550 ms
17-03-17 22:59:32.628 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:32.678 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-17 22:59:32.678 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:32.678 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.170162389806917. ----------
17-03-17 22:59:32.678 -07 000000610 INF: Cycle	70	Tile	10	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:32.678 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36993, sync = True, waitForSettling = True)
17-03-17 22:59:32.678 -07 000000610 INF: Z Motor: Moving to -0.169343 mm, started at -0.170162 mm, distance = 0.82 um
17-03-17 22:59:32.678 -07 000000610 INF: FPGA: Xmit ZDACW 36993\n [Z Motor]
17-03-17 22:59:32.678 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 22:59:32.688 -07 000000610 INF: FPGA: 'ZDACW 36993' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:32.688 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:32.688 -07 000000547 INF: FPGA: Recv ZDACR 36993
17-03-17 22:59:32.698 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.698 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:32.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.848 -07 000000501 INF: FPGA: Recv ZSGSRD 35653
17-03-17 22:59:32.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:32.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.858 -07 000000382 INF: FPGA: Recv ZSGSRD 35651
17-03-17 22:59:32.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.868 -07 000000478 INF: FPGA: Recv ZSGSRD 35648
17-03-17 22:59:32.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.878 -07 000000448 INF: FPGA: Recv ZSGSRD 35651
17-03-17 22:59:32.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.888 -07 000000429 INF: FPGA: Recv ZSGSRD 35651
17-03-17 22:59:32.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.898 -07 000000501 INF: FPGA: Recv ZSGSRD 35656
17-03-17 22:59:32.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.908 -07 000000482 INF: FPGA: Recv ZSGSRD 35654
17-03-17 22:59:32.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.918 -07 000000478 INF: FPGA: Recv ZSGSRD 35653
17-03-17 22:59:32.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.928 -07 000000618 INF: FPGA: Recv ZSGSRD 35651
17-03-17 22:59:32.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:32.938 -07 000000576 INF: FPGA: Recv ZSGSRD 35651
17-03-17 22:59:32.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.948 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:32.948 -07 000000501 INF: FPGA: Recv ZPIEZORD 31563
17-03-17 22:59:32.958 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:32.958 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.645 V. Piezo Error = -9.0 V.
17-03-17 22:59:32.958 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35652 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35651 (-168.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35648 (-168.5 uncal um), Max = 35656 (-168.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 22:59:32.958 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35652, posNoise = 4, negNoise = 4
17-03-17 22:59:32.958 -07 000000610 INF: Z Motor: After move to -0.169343, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:32.958 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 22:59:32.958 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:32.958 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:32.958 -07 000000478 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:32.958 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:32.958 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:32.958 -07 000000551 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:32.958 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:32.958 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:32.958 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:32.958 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:32.958 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:32.958 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:32.968 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:32.968 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:32.968 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:32.968 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:32.978 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 22:59:32.978 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 22:59:32.978 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 22:59:32.978 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 22:59:32.988 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37170 150\n [Camera]
17-03-17 22:59:33.188 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:33.648 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:33.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:33.648 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:33.648 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:33.648 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 22:59:33.648 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:33.648 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:33.648 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:33.648 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:33.648 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 22:59:33.838 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37170 849
17-03-17 22:59:33.988 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:34.028 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 22:59:34.028 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 22:59:34.028 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:34.028 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 22:59:34.028 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 22:59:34.028 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:34.028 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:34.028 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 22:59:34.038 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:34.038 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 22:59:34.218 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:34.218 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:34.218 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:34.218 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:34.218 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 22:59:34.218 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:34.218 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:34.218 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:34.218 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:34.218 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 22:59:34.408 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:34.408 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:34.408 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37170 150' command took 2 ms to send, 1411 ms to get response, and 1421 ms overall
17-03-17 22:59:34.408 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 22:59:34.408 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37158203125, Z-Position -0.169359363289197. ------
17-03-17 22:59:34.408 -07 000000409 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:34.408 -07 000000482 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17575 mm
17-03-17 22:59:34.408 -07 000000482 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:34.418 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 38392, sync = True, waitForSettling = False)
17-03-17 22:59:34.418 -07 000000618 INF: Z Motor: Moving to -0.175747 mm, started at -0.169359 mm, distance = -6.39 um
17-03-17 22:59:34.418 -07 000000618 INF: FPGA: Xmit ZDACW 38392\n [Z Motor]
17-03-17 22:59:34.418 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:34.418 -07 000000409 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 4 ms to get response, and 6 ms overall
17-03-17 22:59:34.418 -07 000000541 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 22:59:34.418 -07 000000541 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-17 22:59:34.418 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 22:59:34.428 -07 000000618 INF: FPGA: 'ZDACW 38392' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 22:59:34.428 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:34.428 -07 000000462 INF: FPGA: Recv ZDACR 38392
17-03-17 22:59:34.438 -07 000000409 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 22:59:34.438 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:34.438 -07 000000618 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet))
17-03-17 22:59:34.448 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:34.448 -07 000000551 INF: FPGA: Recv YRDPOS 137977
17-03-17 22:59:34.458 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 34 ms overall
17-03-17 22:59:34.458 -07 000000541 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:34.458 -07 000000541 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:34.458 -07 000000541 INF: Y Motor: Moving 1346 steps-23
17-03-17 22:59:34.458 -07 000000541 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:34.608 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 389 ms.
17-03-17 22:59:34.608 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 22:59:34.608 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:34.608 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 22:59:34.608 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 22:59:34.608 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:34.608 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:34.608 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 22:59:34.608 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:34.618 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-17 22:59:34.638 -07 000000547 INF: FPGA: Recv FOCMRRFOC
17-03-17 22:59:34.638 -07 000000409 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 217 ms overall
17-03-17 22:59:34.828 -07 000000429 INF: FPGA: Recv YMVTILE
17-03-17 22:59:34.828 -07 000000541 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-17 22:59:34.878 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:34.878 -07 000000547 INF: FPGA: Recv YRDPOS 139683
17-03-17 22:59:34.888 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:34.888 -07 000000541 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:34.888 -07 000000541 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 22:59:34.888 -07 000000541 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.841 mm, average velocity = 2.225 mm/sec
17-03-17 22:59:35.348 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.011254,
17-03-17 22:59:35.838 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:35.838 -07 000000448 INF: FPGA: Recv YRDPOS 139683
17-03-17 22:59:35.848 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:35.848 -07 000000541 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:35.868 -07 000000541 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:35.868 -07 000000541 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:35.868 -07 000000541 INF: Y Motor: Moved to 68.2046 after 1448 ms (table move)
17-03-17 22:59:35.868 -07 000000482 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175747 mm (DAC = 38392)
17-03-17 22:59:35.868 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.878 -07 000000623 INF: FPGA: Recv ZSGSRD 36652
17-03-17 22:59:35.878 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:35.878 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.878 -07 000000382 INF: FPGA: Recv ZSGSRD 36650
17-03-17 22:59:35.888 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:35.888 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.888 -07 000000627 INF: FPGA: Recv ZSGSRD 36650
17-03-17 22:59:35.898 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.898 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.898 -07 000000475 INF: FPGA: Recv ZSGSRD 36646
17-03-17 22:59:35.908 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.908 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.908 -07 000000547 INF: FPGA: Recv ZSGSRD 36641
17-03-17 22:59:35.918 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.918 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.918 -07 000000462 INF: FPGA: Recv ZSGSRD 36648
17-03-17 22:59:35.928 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.928 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.928 -07 000000382 INF: FPGA: Recv ZSGSRD 36645
17-03-17 22:59:35.938 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.938 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.938 -07 000000593 INF: FPGA: Recv ZSGSRD 36646
17-03-17 22:59:35.948 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.948 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.948 -07 000000541 INF: FPGA: Recv ZSGSRD 36655
17-03-17 22:59:35.958 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.958 -07 000000482 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:35.958 -07 000000429 INF: FPGA: Recv ZSGSRD 36653
17-03-17 22:59:35.968 -07 000000482 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.968 -07 000000482 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:35.968 -07 000000551 INF: FPGA: Recv ZPIEZORD 32900
17-03-17 22:59:35.978 -07 000000482 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:35.978 -07 000000482 INF: Z Motor: Piezo is near 50.3 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.858 V. Piezo Error = -8.3 V.
17-03-17 22:59:35.978 -07 000000482 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.7 um, Read 10 ADC samples: Avg = 36649 (-174.9 uncal um), Error = 0.9 uncal um, Median = 36649 (-174.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36641 (-174.8 uncal um), Max = 36655 (-174.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 22:59:35.978 -07 000000482 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36649, posNoise = 6, negNoise = 8
17-03-17 22:59:35.978 -07 000000482 INF: Z Motor: After move to -0.175747, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:35.978 -07 000000482 INF: Z Motor: Settle wait time = 1454 ms, measure time = 102 ms (allowed 150 ms), total time = 1556 ms
17-03-17 22:59:35.978 -07 000000482 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:36.028 -07 000000482 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-17 22:59:36.028 -07 000000482 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:36.028 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:36.028 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:36.028 -07 000000593 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:36.028 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 22:59:36.028 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:36.028 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:36.028 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:36.028 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 22:59:36.038 -07 000000429 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:36.038 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 22:59:36.048 -07 000000429 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 22:59:36.048 -07 000000429 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 22:59:36.048 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 22:59:36.098 -07 000000593 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 22:59:36.298 -07 000000576 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 22:59:36.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 22:59:36.298 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 22:59:36.298 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-17 22:59:36.338 -07 000000415 INF: FPGA: Recv @CAMSNAP 280
17-03-17 22:59:36.338 -07 000000409 INF: FPGA: Recv CAMSNAP
17-03-17 22:59:36.338 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 282 ms to get response, and 284 ms overall
17-03-17 22:59:36.418 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 122 ms.
17-03-17 22:59:36.418 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:36.418 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 22:59:36.418 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 125 ms.
17-03-17 22:59:36.438 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:36.438 -07 000000382 INF: Autofocus start
17-03-17 22:59:36.438 -07 000000382 INF: MeasureProfile start
17-03-17 22:59:36.438 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:36.448 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:59:36.448 -07 000000576 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 22:59:36.448 -07 000000382 INF: MeasureProfile done
17-03-17 22:59:36.448 -07 000000382 INF: X=16  Z correction [um]=0.01042744
17-03-17 22:59:36.448 -07 000000382 INF: Autofocus finished
17-03-17 22:59:36.648 -07 000000486 INF: FPGA: Recv FOCMRRIMG
17-03-17 22:59:36.648 -07 000000576 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 22:59:36.648 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.175764302794532. ----------
17-03-17 22:59:36.648 -07 000000610 INF: Cycle	70	Tile	11	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:36.658 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36906, sync = True, waitForSettling = True)
17-03-17 22:59:36.658 -07 000000610 INF: Z Motor: Moving to -0.168945 mm, started at -0.175764 mm, distance = 6.82 um
17-03-17 22:59:36.658 -07 000000610 INF: FPGA: Xmit ZDACW 36906\n [Z Motor]
17-03-17 22:59:36.658 -07 000000593 INF: FPGA: Recv ZDACW
17-03-17 22:59:36.668 -07 000000610 INF: FPGA: 'ZDACW 36906' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 22:59:36.668 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:36.668 -07 000000541 INF: FPGA: Recv ZDACR 36906
17-03-17 22:59:36.678 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.678 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:36.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.828 -07 000000486 INF: FPGA: Recv ZSGSRD 35596
17-03-17 22:59:36.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:36.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.838 -07 000000462 INF: FPGA: Recv ZSGSRD 35588
17-03-17 22:59:36.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.848 -07 000000475 INF: FPGA: Recv ZSGSRD 35590
17-03-17 22:59:36.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.858 -07 000000462 INF: FPGA: Recv ZSGSRD 35593
17-03-17 22:59:36.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.868 -07 000000541 INF: FPGA: Recv ZSGSRD 35590
17-03-17 22:59:36.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.878 -07 000000627 INF: FPGA: Recv ZSGSRD 35586
17-03-17 22:59:36.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.888 -07 000000501 INF: FPGA: Recv ZSGSRD 35589
17-03-17 22:59:36.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.898 -07 000000486 INF: FPGA: Recv ZSGSRD 35592
17-03-17 22:59:36.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.908 -07 000000478 INF: FPGA: Recv ZSGSRD 35587
17-03-17 22:59:36.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:36.918 -07 000000448 INF: FPGA: Recv ZSGSRD 35585
17-03-17 22:59:36.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:36.928 -07 000000429 INF: FPGA: Recv ZPIEZORD 31495
17-03-17 22:59:36.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:36.938 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.631 V. Piezo Error = -9.0 V.
17-03-17 22:59:36.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35590 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35590 (-168.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35585 (-168.1 uncal um), Max = 35596 (-168.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:36.938 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35590, posNoise = 6, negNoise = 5
17-03-17 22:59:36.938 -07 000000610 INF: Z Motor: After move to -0.168945, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:36.938 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 22:59:36.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:36.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:36.938 -07 000000448 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:36.938 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:36.938 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:36.938 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:36.938 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:36.938 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:36.938 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:36.938 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:36.938 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:36.938 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:36.948 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:36.948 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:36.948 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:36.948 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:36.958 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 22:59:36.958 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 22:59:36.958 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 22:59:36.958 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 22:59:36.958 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37083 150\n [Camera]
17-03-17 22:59:37.028 -07 000000486 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:37.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:37.158 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:37.618 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 657
17-03-17 22:59:37.618 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 657
17-03-17 22:59:37.628 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:37.628 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:37.628 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 22:59:37.628 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 657
17-03-17 22:59:37.628 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 657
17-03-17 22:59:37.628 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:37.628 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:37.628 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 22:59:37.808 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37083 849
17-03-17 22:59:37.958 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:37.998 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 22:59:37.998 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 22:59:37.998 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:37.998 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 22:59:37.998 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 22:59:37.998 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:38.008 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:38.008 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 22:59:38.008 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:38.018 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 22:59:38.188 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:38.188 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:38.188 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:38.188 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:38.188 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 22:59:38.188 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:38.188 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:38.188 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:38.188 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:38.188 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 22:59:38.378 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:38.378 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:38.378 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37083 150' command took 2 ms to send, 1414 ms to get response, and 1421 ms overall
17-03-17 22:59:38.378 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169436
17-03-17 22:59:38.378 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16944 mm
17-03-17 22:59:38.378 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:38.378 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 22:59:38.378 -07 000000627 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-17 22:59:38.378 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:38.388 -07 000000482 INF: Z Motor: Entering MoveAbsStepped (DAC = 37013, sync = True, waitForSettling = False)
17-03-17 22:59:38.388 -07 000000482 INF: Z Motor: Moving to -0.169435 mm, started at -0.168961 mm, distance = -0.47 um
17-03-17 22:59:38.388 -07 000000478 INF: FPGA: Recv YRDPOS 139684
17-03-17 22:59:38.388 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 22:59:38.388 -07 000000482 INF: FPGA: Xmit ZDACW 37013\n [Z Motor]
17-03-17 22:59:38.388 -07 000000627 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:38.388 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 22:59:38.388 -07 000000627 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:38.388 -07 000000627 INF: Y Motor: Moving 1340 steps-16
17-03-17 22:59:38.398 -07 000000482 INF: FPGA: 'ZDACW 37013' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 22:59:38.398 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:38.408 -07 000000482 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:38.408 -07 000000547 INF: FPGA: Recv ZDACR 37013
17-03-17 22:59:38.418 -07 000000482 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 22:59:38.418 -07 000000482 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 22:59:38.588 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 395 ms.
17-03-17 22:59:38.588 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 398 ms.
17-03-17 22:59:38.588 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 22:59:38.588 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:38.588 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 22:59:38.588 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:38.588 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:38.598 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 22:59:38.598 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 22:59:38.598 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-17 22:59:38.768 -07 000000415 INF: FPGA: Recv YMVTILE
17-03-17 22:59:38.768 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 381 ms overall
17-03-17 22:59:38.808 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:38.818 -07 000000547 INF: FPGA: Recv YRDPOS 141366
17-03-17 22:59:38.818 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 22:59:38.818 -07 000000627 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:38.818 -07 000000627 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 22:59:38.818 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.838 mm, average velocity = 2.200 mm/sec
17-03-17 22:59:39.768 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:39.768 -07 000000475 INF: FPGA: Recv YRDPOS 141367
17-03-17 22:59:39.778 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:39.778 -07 000000627 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:39.798 -07 000000627 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:39.798 -07 000000627 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 22:59:39.798 -07 000000627 INF: Y Motor: Moved to 69.0269 after 1416 ms (table move)
17-03-17 22:59:39.798 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169435 mm (DAC = 37013)
17-03-17 22:59:39.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.808 -07 000000547 INF: FPGA: Recv ZSGSRD 35669
17-03-17 22:59:39.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:39.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.808 -07 000000482 INF: FPGA: Recv ZSGSRD 35665
17-03-17 22:59:39.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:39.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.818 -07 000000623 INF: FPGA: Recv ZSGSRD 35660
17-03-17 22:59:39.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.828 -07 000000475 INF: FPGA: Recv ZSGSRD 35667
17-03-17 22:59:39.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.838 -07 000000576 INF: FPGA: Recv ZSGSRD 35670
17-03-17 22:59:39.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.848 -07 000000551 INF: FPGA: Recv ZSGSRD 35669
17-03-17 22:59:39.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.858 -07 000000593 INF: FPGA: Recv ZSGSRD 35662
17-03-17 22:59:39.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.868 -07 000000623 INF: FPGA: Recv ZSGSRD 35657
17-03-17 22:59:39.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.878 -07 000000541 INF: FPGA: Recv ZSGSRD 35663
17-03-17 22:59:39.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:39.888 -07 000000409 INF: FPGA: Recv ZSGSRD 35669
17-03-17 22:59:39.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.898 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:39.898 -07 000000618 INF: FPGA: Recv ZPIEZORD 31615
17-03-17 22:59:39.908 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.908 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.648 V. Piezo Error = -8.9 V.
17-03-17 22:59:39.908 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35665 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35666 (-168.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35657 (-168.5 uncal um), Max = 35670 (-168.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 22:59:39.908 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35665, posNoise = 5, negNoise = 8
17-03-17 22:59:39.908 -07 000000610 INF: Z Motor: After move to -0.169435, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:39.908 -07 000000610 INF: Z Motor: Settle wait time = 1415 ms, measure time = 103 ms (allowed 150 ms), total time = 1518 ms
17-03-17 22:59:39.908 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:39.958 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1573 ms
17-03-17 22:59:39.958 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:39.958 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.169442878047039. ----------
17-03-17 22:59:39.958 -07 000000610 INF: Cycle	70	Tile	12	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:39.958 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36837, sync = True, waitForSettling = True)
17-03-17 22:59:39.958 -07 000000610 INF: Z Motor: Moving to -0.168629 mm, started at -0.169443 mm, distance = 0.81 um
17-03-17 22:59:39.958 -07 000000610 INF: FPGA: Xmit ZDACW 36837\n [Z Motor]
17-03-17 22:59:39.958 -07 000000593 INF: FPGA: Recv ZDACW
17-03-17 22:59:39.968 -07 000000610 INF: FPGA: 'ZDACW 36837' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:59:39.968 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:39.968 -07 000000415 INF: FPGA: Recv ZDACR 36837
17-03-17 22:59:39.978 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:39.978 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:40.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.128 -07 000000501 INF: FPGA: Recv ZSGSRD 35542
17-03-17 22:59:40.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.138 -07 000000576 INF: FPGA: Recv ZSGSRD 35549
17-03-17 22:59:40.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.148 -07 000000627 INF: FPGA: Recv ZSGSRD 35540
17-03-17 22:59:40.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.158 -07 000000478 INF: FPGA: Recv ZSGSRD 35541
17-03-17 22:59:40.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.168 -07 000000409 INF: FPGA: Recv ZSGSRD 35541
17-03-17 22:59:40.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.178 -07 000000475 INF: FPGA: Recv ZSGSRD 35536
17-03-17 22:59:40.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.188 -07 000000482 INF: FPGA: Recv ZSGSRD 35541
17-03-17 22:59:40.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.198 -07 000000486 INF: FPGA: Recv ZSGSRD 35536
17-03-17 22:59:40.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.208 -07 000000593 INF: FPGA: Recv ZSGSRD 35543
17-03-17 22:59:40.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:40.218 -07 000000502 INF: FPGA: Recv ZSGSRD 35535
17-03-17 22:59:40.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.228 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:40.228 -07 000000551 INF: FPGA: Recv ZPIEZORD 31461
17-03-17 22:59:40.238 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:40.238 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.621 V. Piezo Error = -9.0 V.
17-03-17 22:59:40.238 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35540 (-167.8 uncal um), Error = 0.9 uncal um, Median = 35541 (-167.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35535 (-167.7 uncal um), Max = 35549 (-167.8 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:40.238 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35540, posNoise = 9, negNoise = 5
17-03-17 22:59:40.238 -07 000000610 INF: Z Motor: After move to -0.168629, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:40.238 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 22:59:40.238 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:40.238 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:40.238 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:40.238 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:40.238 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:40.238 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:40.238 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:40.238 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:40.238 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 22:59:40.238 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:40.238 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:40.238 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:40.248 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:40.248 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:40.248 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:40.248 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:40.258 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 22:59:40.258 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 22:59:40.258 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 22:59:40.258 -07 000000482 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 22:59:40.258 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 37013 150\n [Camera]
17-03-17 22:59:40.458 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:40.718 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.012614,
17-03-17 22:59:40.918 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 657
17-03-17 22:59:40.918 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 657
17-03-17 22:59:40.918 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:40.928 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:40.928 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 22:59:40.928 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 657
17-03-17 22:59:40.928 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 657
17-03-17 22:59:40.928 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:41.078 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:41.078 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 22:59:41.108 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37013 849
17-03-17 22:59:41.258 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:41.328 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 22:59:41.328 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 22:59:41.328 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:41.328 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 22:59:41.328 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-17 22:59:41.458 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 22:59:41.458 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 22:59:41.458 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:41.458 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:41.468 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 537 ms.
17-03-17 22:59:41.488 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:41.488 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:41.488 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:41.488 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:41.488 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:41.488 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:41.488 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:41.488 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 22:59:41.498 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:41.498 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 22:59:41.678 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:41.678 -07 000000409 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:41.678 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 37013 150' command took 2 ms to send, 1414 ms to get response, and 1421 ms overall
17-03-17 22:59:41.678 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.169006
17-03-17 22:59:41.678 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16901 mm
17-03-17 22:59:41.678 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:41.678 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 22:59:41.678 -07 000000576 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-17 22:59:41.678 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:41.678 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 36919, sync = True, waitForSettling = False)
17-03-17 22:59:41.678 -07 000000593 INF: Z Motor: Moving to -0.169004 mm, started at -0.168640 mm, distance = -0.36 um
17-03-17 22:59:41.688 -07 000000593 INF: FPGA: Xmit ZDACW 36919\n [Z Motor]
17-03-17 22:59:41.688 -07 000000475 INF: FPGA: Recv YRDPOS 141367
17-03-17 22:59:41.688 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 22:59:41.688 -07 000000576 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:41.688 -07 000000576 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:41.688 -07 000000576 INF: Y Motor: Moving 1353 steps-33
17-03-17 22:59:41.688 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 22:59:41.698 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:41.698 -07 000000593 INF: FPGA: 'ZDACW 36919' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:41.708 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:41.708 -07 000000462 INF: FPGA: Recv ZDACR 36919
17-03-17 22:59:41.718 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 22:59:41.718 -07 000000593 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-17 22:59:41.868 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 22:59:41.868 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 22:59:41.868 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:41.868 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 22:59:41.868 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 22:59:41.868 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:41.878 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:41.878 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:41.878 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 22:59:41.878 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 22:59:42.028 -07 000000593 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:42.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:42.068 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 22:59:42.068 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 383 ms overall
17-03-17 22:59:42.118 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:42.118 -07 000000502 INF: FPGA: Recv YRDPOS 143078
17-03-17 22:59:42.128 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:42.128 -07 000000576 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:42.128 -07 000000576 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-17 22:59:42.128 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.846 mm, average velocity = 2.208 mm/sec
17-03-17 22:59:43.078 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:43.078 -07 000000486 INF: FPGA: Recv YRDPOS 143079
17-03-17 22:59:43.088 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:43.088 -07 000000576 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:43.108 -07 000000576 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:43.108 -07 000000576 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 22:59:43.108 -07 000000576 INF: Y Motor: Moved to 69.8628 after 1426 ms (table move)
17-03-17 22:59:43.108 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169004 mm (DAC = 36919)
17-03-17 22:59:43.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.118 -07 000000501 INF: FPGA: Recv ZSGSRD 35603
17-03-17 22:59:43.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:43.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.118 -07 000000486 INF: FPGA: Recv ZSGSRD 35597
17-03-17 22:59:43.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:43.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.128 -07 000000448 INF: FPGA: Recv ZSGSRD 35588
17-03-17 22:59:43.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.138 -07 000000541 INF: FPGA: Recv ZSGSRD 35597
17-03-17 22:59:43.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.148 -07 000000618 INF: FPGA: Recv ZSGSRD 35604
17-03-17 22:59:43.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.158 -07 000000623 INF: FPGA: Recv ZSGSRD 35593
17-03-17 22:59:43.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.168 -07 000000486 INF: FPGA: Recv ZSGSRD 35597
17-03-17 22:59:43.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.178 -07 000000415 INF: FPGA: Recv ZSGSRD 35593
17-03-17 22:59:43.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.188 -07 000000382 INF: FPGA: Recv ZSGSRD 35601
17-03-17 22:59:43.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.198 -07 000000462 INF: FPGA: Recv ZSGSRD 35592
17-03-17 22:59:43.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:43.208 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:43.208 -07 000000576 INF: FPGA: Recv ZPIEZORD 31515
17-03-17 22:59:43.218 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.218 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.633 V. Piezo Error = -9.0 V.
17-03-17 22:59:43.218 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35596 (-168.1 uncal um), Error = 0.9 uncal um, Median = 35597 (-168.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35588 (-168.1 uncal um), Max = 35604 (-168.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 22:59:43.218 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35596, posNoise = 8, negNoise = 8
17-03-17 22:59:43.218 -07 000000610 INF: Z Motor: After move to -0.169004, error = 0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:43.218 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 102 ms (allowed 150 ms), total time = 1530 ms
17-03-17 22:59:43.218 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:43.268 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms
17-03-17 22:59:43.268 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:43.268 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.168999607409258. ----------
17-03-17 22:59:43.268 -07 000000610 INF: Cycle	70	Tile	13	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:43.268 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36743, sync = True, waitForSettling = True)
17-03-17 22:59:43.268 -07 000000610 INF: Z Motor: Moving to -0.168199 mm, started at -0.169000 mm, distance = 0.80 um
17-03-17 22:59:43.268 -07 000000610 INF: FPGA: Xmit ZDACW 36743\n [Z Motor]
17-03-17 22:59:43.268 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 22:59:43.278 -07 000000610 INF: FPGA: 'ZDACW 36743' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:59:43.278 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:43.278 -07 000000482 INF: FPGA: Recv ZDACR 36743
17-03-17 22:59:43.288 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.288 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:43.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.438 -07 000000382 INF: FPGA: Recv ZSGSRD 35479
17-03-17 22:59:43.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:43.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.448 -07 000000486 INF: FPGA: Recv ZSGSRD 35475
17-03-17 22:59:43.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.458 -07 000000475 INF: FPGA: Recv ZSGSRD 35469
17-03-17 22:59:43.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.468 -07 000000541 INF: FPGA: Recv ZSGSRD 35471
17-03-17 22:59:43.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.478 -07 000000409 INF: FPGA: Recv ZSGSRD 35476
17-03-17 22:59:43.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.488 -07 000000501 INF: FPGA: Recv ZSGSRD 35479
17-03-17 22:59:43.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.498 -07 000000486 INF: FPGA: Recv ZSGSRD 35469
17-03-17 22:59:43.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.508 -07 000000502 INF: FPGA: Recv ZSGSRD 35469
17-03-17 22:59:43.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.518 -07 000000429 INF: FPGA: Recv ZSGSRD 35475
17-03-17 22:59:43.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:43.528 -07 000000482 INF: FPGA: Recv ZSGSRD 35478
17-03-17 22:59:43.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.538 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:43.538 -07 000000547 INF: FPGA: Recv ZPIEZORD 31370
17-03-17 22:59:43.548 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:43.548 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.607 V. Piezo Error = -9.1 V.
17-03-17 22:59:43.548 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.2 um, Read 10 ADC samples: Avg = 35474 (-167.3 uncal um), Error = 0.9 uncal um, Median = 35475 (-167.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35469 (-167.3 uncal um), Max = 35479 (-167.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:43.548 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35474, posNoise = 5, negNoise = 5
17-03-17 22:59:43.548 -07 000000610 INF: Z Motor: After move to -0.168199, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:43.548 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 22:59:43.548 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:43.548 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:43.548 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:43.548 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:43.548 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:43.548 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:43.548 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:43.548 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:43.548 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:43.548 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:43.548 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:43.548 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:43.558 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:43.558 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:43.558 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 22:59:43.558 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:43.568 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 22:59:43.568 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:43.568 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 22:59:43.568 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:43.578 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36919 150\n [Camera]
17-03-17 22:59:43.778 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:44.238 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:44.238 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:44.238 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:44.238 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:44.238 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-17 22:59:44.238 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:44.238 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:44.238 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:44.358 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:44.358 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 22:59:44.428 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36919 849
17-03-17 22:59:44.578 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:44.618 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 22:59:44.618 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 22:59:44.618 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:44.628 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:44.628 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 22:59:44.728 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 22:59:44.728 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 22:59:44.728 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:44.728 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:44.738 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 495 ms.
17-03-17 22:59:44.808 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:44.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:44.808 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:44.808 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:44.808 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:44.808 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:44.808 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:44.808 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 22:59:44.808 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:44.808 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 22:59:44.998 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 22:59:44.998 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:44.998 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36919 150' command took 2 ms to send, 1413 ms to get response, and 1421 ms overall
17-03-17 22:59:44.998 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168607
17-03-17 22:59:44.998 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16861 mm
17-03-17 22:59:44.998 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:44.998 -07 000000547 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 22:59:44.998 -07 000000547 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-17 22:59:44.998 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:44.998 -07 000000551 INF: Z Motor: Entering MoveAbsStepped (DAC = 36832, sync = True, waitForSettling = False)
17-03-17 22:59:44.998 -07 000000551 INF: Z Motor: Moving to -0.168606 mm, started at -0.168216 mm, distance = -0.39 um
17-03-17 22:59:45.008 -07 000000551 INF: FPGA: Xmit ZDACW 36832\n [Z Motor]
17-03-17 22:59:45.008 -07 000000429 INF: FPGA: Recv YRDPOS 143079
17-03-17 22:59:45.008 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 22:59:45.008 -07 000000547 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:45.008 -07 000000547 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:45.008 -07 000000547 INF: Y Motor: Moving 1344 steps-21
17-03-17 22:59:45.008 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 22:59:45.018 -07 000000551 INF: FPGA: 'ZDACW 36832' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 22:59:45.018 -07 000000551 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:45.018 -07 000000502 INF: FPGA: Recv ZDACR 36832
17-03-17 22:59:45.028 -07 000000547 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:45.028 -07 000000551 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:45.028 -07 000000551 INF: Z Motor: MoveAbsStepped took 22 ms (did NOT wait for settling yet))
17-03-17 22:59:45.188 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 22:59:45.188 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 22:59:45.188 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:45.188 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 22:59:45.188 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-17 22:59:45.188 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:45.188 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:45.188 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:45.188 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 22:59:45.198 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 22:59:45.398 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 22:59:45.398 -07 000000547 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 396 ms overall
17-03-17 22:59:45.448 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:45.448 -07 000000551 INF: FPGA: Recv YRDPOS 144769
17-03-17 22:59:45.458 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:45.458 -07 000000547 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:45.458 -07 000000547 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 22:59:45.458 -07 000000547 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.110 mm/sec
17-03-17 22:59:46.088 -07 000000623 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.018051,
17-03-17 22:59:46.408 -07 000000547 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:46.408 -07 000000502 INF: FPGA: Recv YRDPOS 144769
17-03-17 22:59:46.418 -07 000000547 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:46.418 -07 000000547 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:46.438 -07 000000547 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:46.438 -07 000000547 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:46.438 -07 000000547 INF: Y Motor: Moved to 70.6880 after 1440 ms (table move)
17-03-17 22:59:46.448 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168606 mm (DAC = 36832)
17-03-17 22:59:46.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.468 -07 000000623 INF: FPGA: Recv ZSGSRD 35534
17-03-17 22:59:46.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:46.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.478 -07 000000547 INF: FPGA: Recv ZSGSRD 35537
17-03-17 22:59:46.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.498 -07 000000415 INF: FPGA: Recv ZSGSRD 35531
17-03-17 22:59:46.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 22:59:46.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.508 -07 000000482 INF: FPGA: Recv ZSGSRD 35542
17-03-17 22:59:46.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.518 -07 000000502 INF: FPGA: Recv ZSGSRD 35540
17-03-17 22:59:46.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.528 -07 000000551 INF: FPGA: Recv ZSGSRD 35531
17-03-17 22:59:46.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.538 -07 000000547 INF: FPGA: Recv ZSGSRD 35539
17-03-17 22:59:46.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.548 -07 000000576 INF: FPGA: Recv ZSGSRD 35541
17-03-17 22:59:46.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.558 -07 000000627 INF: FPGA: Recv ZSGSRD 35536
17-03-17 22:59:46.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.568 -07 000000502 INF: FPGA: Recv ZSGSRD 35534
17-03-17 22:59:46.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.578 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:46.578 -07 000000593 INF: FPGA: Recv ZPIEZORD 31404
17-03-17 22:59:46.588 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.588 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.620 V. Piezo Error = -9.1 V.
17-03-17 22:59:46.588 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35536 (-167.7 uncal um), Error = 0.9 uncal um, Median = 35536 (-167.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35531 (-167.7 uncal um), Max = 35542 (-167.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:46.588 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35536, posNoise = 6, negNoise = 5
17-03-17 22:59:46.588 -07 000000610 INF: Z Motor: After move to -0.168606, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:46.588 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 140 ms (allowed 150 ms), total time = 1582 ms
17-03-17 22:59:46.588 -07 000000610 INF: Z Motor: Waiting extra 10 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:46.598 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-17 22:59:46.598 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:46.598 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.168614154680752. ----------
17-03-17 22:59:46.598 -07 000000610 INF: Cycle	70	Tile	14	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:46.598 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36655, sync = True, waitForSettling = True)
17-03-17 22:59:46.598 -07 000000610 INF: Z Motor: Moving to -0.167796 mm, started at -0.168614 mm, distance = 0.82 um
17-03-17 22:59:46.598 -07 000000610 INF: FPGA: Xmit ZDACW 36655\n [Z Motor]
17-03-17 22:59:46.598 -07 000000478 INF: FPGA: Recv ZDACW
17-03-17 22:59:46.608 -07 000000610 INF: FPGA: 'ZDACW 36655' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 22:59:46.608 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:46.608 -07 000000551 INF: FPGA: Recv ZDACR 36655
17-03-17 22:59:46.618 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.618 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:46.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.768 -07 000000541 INF: FPGA: Recv ZSGSRD 35413
17-03-17 22:59:46.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:46.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.778 -07 000000409 INF: FPGA: Recv ZSGSRD 35410
17-03-17 22:59:46.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.788 -07 000000547 INF: FPGA: Recv ZSGSRD 35411
17-03-17 22:59:46.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.798 -07 000000382 INF: FPGA: Recv ZSGSRD 35411
17-03-17 22:59:46.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.808 -07 000000623 INF: FPGA: Recv ZSGSRD 35410
17-03-17 22:59:46.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.818 -07 000000501 INF: FPGA: Recv ZSGSRD 35410
17-03-17 22:59:46.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.828 -07 000000478 INF: FPGA: Recv ZSGSRD 35409
17-03-17 22:59:46.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:46.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.838 -07 000000429 INF: FPGA: Recv ZSGSRD 35413
17-03-17 22:59:46.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.848 -07 000000547 INF: FPGA: Recv ZSGSRD 35414
17-03-17 22:59:46.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:46.858 -07 000000415 INF: FPGA: Recv ZSGSRD 35406
17-03-17 22:59:46.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.868 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:46.868 -07 000000551 INF: FPGA: Recv ZPIEZORD 31257
17-03-17 22:59:46.878 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:46.878 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.593 V. Piezo Error = -9.2 V.
17-03-17 22:59:46.878 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.8 um, Read 10 ADC samples: Avg = 35411 (-166.9 uncal um), Error = 0.9 uncal um, Median = 35410 (-166.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35406 (-166.9 uncal um), Max = 35414 (-167.0 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:46.878 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35411, posNoise = 3, negNoise = 5
17-03-17 22:59:46.878 -07 000000610 INF: Z Motor: After move to -0.167796, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:46.878 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 22:59:46.878 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:46.878 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:46.878 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:46.878 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:46.878 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:46.878 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:46.878 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:46.878 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:46.878 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:46.878 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:46.878 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:46.878 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:46.888 -07 000000382 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:46.888 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:46.888 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:46.888 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:46.898 -07 000000382 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 22:59:46.898 -07 000000382 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:46.898 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 22:59:46.898 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:46.908 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36832 150\n [Camera]
17-03-17 22:59:47.028 -07 000000429 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:47.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:47.108 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:47.568 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:47.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:47.568 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:47.568 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:47.568 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-17 22:59:47.568 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:47.568 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:47.568 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:47.568 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:47.568 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-17 22:59:47.758 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36832 849
17-03-17 22:59:47.908 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:47.948 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 22:59:47.948 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 22:59:47.948 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:47.948 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 22:59:47.948 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 22:59:47.948 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:47.948 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:47.948 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 22:59:47.948 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:47.958 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 22:59:48.138 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:48.138 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:48.138 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:48.138 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:48.138 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-17 22:59:48.138 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:48.138 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:48.138 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:48.138 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:48.138 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 22:59:48.328 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:48.328 -07 000000547 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:48.328 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36832 150' command took 2 ms to send, 1414 ms to get response, and 1424 ms overall
17-03-17 22:59:48.328 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 22:59:48.328 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68798828125, Z-Position -0.167811128163032. ------
17-03-17 22:59:48.338 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:48.338 -07 000000478 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.17402 mm
17-03-17 22:59:48.338 -07 000000478 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:48.338 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 22:59:48.338 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 38014, sync = True, waitForSettling = False)
17-03-17 22:59:48.338 -07 000000593 INF: Z Motor: Moving to -0.174017 mm, started at -0.167811 mm, distance = -6.21 um
17-03-17 22:59:48.338 -07 000000475 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:48.338 -07 000000462 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-17 22:59:48.348 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:48.348 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:48.348 -07 000000501 INF: FPGA: Recv YRDPOS 144769
17-03-17 22:59:48.358 -07 000000593 INF: FPGA: Xmit ZDACW 38014\n [Z Motor]
17-03-17 22:59:48.358 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 22:59:48.358 -07 000000462 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:48.358 -07 000000462 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:48.358 -07 000000462 INF: Y Motor: Moving 1351 steps-30
17-03-17 22:59:48.358 -07 000000551 INF: FPGA: Recv ZDACW
17-03-17 22:59:48.368 -07 000000486 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 22:59:48.368 -07 000000593 INF: FPGA: 'ZDACW 38014' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-17 22:59:48.378 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:48.388 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:48.388 -07 000000547 INF: FPGA: Recv ZDACR 38014
17-03-17 22:59:48.398 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:48.398 -07 000000593 INF: Z Motor: MoveAbsStepped took 56 ms (did NOT wait for settling yet))
17-03-17 22:59:48.518 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 384 ms.
17-03-17 22:59:48.518 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 22:59:48.518 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:48.528 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:48.528 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 22:59:48.528 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 385 ms.
17-03-17 22:59:48.528 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 22:59:48.528 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:48.528 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:48.538 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 22:59:48.568 -07 000000448 INF: FPGA: Recv FOCMRRFOC
17-03-17 22:59:48.568 -07 000000486 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 22:59:48.748 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-17 22:59:48.748 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 22:59:48.798 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:48.798 -07 000000623 INF: FPGA: Recv YRDPOS 146469
17-03-17 22:59:48.808 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:48.808 -07 000000462 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:48.808 -07 000000462 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 22:59:48.808 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.845 mm, average velocity = 2.122 mm/sec
17-03-17 22:59:49.758 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:49.758 -07 000000448 INF: FPGA: Recv YRDPOS 146470
17-03-17 22:59:49.768 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.768 -07 000000462 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:49.788 -07 000000462 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:49.788 -07 000000462 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 22:59:49.788 -07 000000462 INF: Y Motor: Moved to 71.5186 after 1451 ms (table move)
17-03-17 22:59:49.788 -07 000000478 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174017 mm (DAC = 38014)
17-03-17 22:59:49.788 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.798 -07 000000502 INF: FPGA: Recv ZSGSRD 36386
17-03-17 22:59:49.798 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:49.798 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.798 -07 000000486 INF: FPGA: Recv ZSGSRD 36372
17-03-17 22:59:49.808 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:49.808 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.808 -07 000000482 INF: FPGA: Recv ZSGSRD 36377
17-03-17 22:59:49.818 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.818 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.818 -07 000000576 INF: FPGA: Recv ZSGSRD 36386
17-03-17 22:59:49.828 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.828 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.828 -07 000000551 INF: FPGA: Recv ZSGSRD 36368
17-03-17 22:59:49.838 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.838 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.838 -07 000000627 INF: FPGA: Recv ZSGSRD 36381
17-03-17 22:59:49.848 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.848 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.848 -07 000000409 INF: FPGA: Recv ZSGSRD 36372
17-03-17 22:59:49.858 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.858 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.858 -07 000000482 INF: FPGA: Recv ZSGSRD 36377
17-03-17 22:59:49.868 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.868 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.868 -07 000000576 INF: FPGA: Recv ZSGSRD 36375
17-03-17 22:59:49.878 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.878 -07 000000478 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:49.878 -07 000000551 INF: FPGA: Recv ZSGSRD 36377
17-03-17 22:59:49.888 -07 000000478 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.888 -07 000000478 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:49.888 -07 000000501 INF: FPGA: Recv ZPIEZORD 32566
17-03-17 22:59:49.898 -07 000000478 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:49.898 -07 000000478 INF: Z Motor: Piezo is near 49.6 V (nominally 0 to 100 V), expect near 58.0 V, since DAC is at 5.801 V. Piezo Error = -8.4 V.
17-03-17 22:59:49.898 -07 000000478 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.0 um, Read 10 ADC samples: Avg = 36377 (-173.1 uncal um), Error = 0.9 uncal um, Median = 36377 (-173.1 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 36368 (-173.1 uncal um), Max = 36386 (-173.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 22:59:49.898 -07 000000478 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36377, posNoise = 9, negNoise = 9
17-03-17 22:59:49.898 -07 000000478 INF: Z Motor: After move to -0.174017, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:49.898 -07 000000478 INF: Z Motor: Settle wait time = 1454 ms, measure time = 102 ms (allowed 150 ms), total time = 1556 ms
17-03-17 22:59:49.898 -07 000000478 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:49.948 -07 000000478 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-17 22:59:49.948 -07 000000478 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:49.948 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:49.948 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:49.948 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:49.948 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:49.948 -07 000000551 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 22:59:49.948 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:49.948 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 22:59:49.948 -07 000000551 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 22:59:49.948 -07 000000551 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:49.948 -07 000000551 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 22:59:49.958 -07 000000551 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-17 22:59:49.958 -07 000000551 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-17 22:59:49.968 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 22:59:50.008 -07 000000623 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 22:59:50.208 -07 000000593 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 22:59:50.208 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 22:59:50.208 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 22:59:50.218 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-17 22:59:50.248 -07 000000627 INF: FPGA: Recv @CAMSNAP 280
17-03-17 22:59:50.248 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-17 22:59:50.248 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 22:59:50.338 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 22:59:50.338 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:50.338 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 22:59:50.338 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 22:59:50.448 -07 000000541 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 22:59:50.448 -07 000000547 INF: Autofocus start
17-03-17 22:59:50.448 -07 000000547 INF: MeasureProfile start
17-03-17 22:59:50.448 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-17 22:59:50.458 -07 000000541 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 22:59:50.458 -07 000000541 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 22:59:50.458 -07 000000547 INF: MeasureProfile done
17-03-17 22:59:50.458 -07 000000547 INF: X=0  Z correction [um]=-0.0713522
17-03-17 22:59:50.458 -07 000000547 INF: Autofocus finished
17-03-17 22:59:50.658 -07 000000627 INF: FPGA: Recv FOCMRRIMG
17-03-17 22:59:50.658 -07 000000541 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-17 22:59:50.658 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.174016917091973. ----------
17-03-17 22:59:50.658 -07 000000610 INF: Cycle	70	Tile	15	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:50.668 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36511, sync = True, waitForSettling = True)
17-03-17 22:59:50.668 -07 000000610 INF: Z Motor: Moving to -0.167137 mm, started at -0.174017 mm, distance = 6.88 um
17-03-17 22:59:50.668 -07 000000610 INF: FPGA: Xmit ZDACW 36511\n [Z Motor]
17-03-17 22:59:50.668 -07 000000551 INF: FPGA: Recv ZDACW
17-03-17 22:59:50.678 -07 000000610 INF: FPGA: 'ZDACW 36511' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:50.678 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:50.678 -07 000000627 INF: FPGA: Recv ZDACR 36511
17-03-17 22:59:50.688 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.688 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:50.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.838 -07 000000502 INF: FPGA: Recv ZSGSRD 35310
17-03-17 22:59:50.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:50.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.848 -07 000000415 INF: FPGA: Recv ZSGSRD 35306
17-03-17 22:59:50.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.858 -07 000000623 INF: FPGA: Recv ZSGSRD 35306
17-03-17 22:59:50.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.868 -07 000000618 INF: FPGA: Recv ZSGSRD 35307
17-03-17 22:59:50.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.878 -07 000000627 INF: FPGA: Recv ZSGSRD 35308
17-03-17 22:59:50.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.888 -07 000000502 INF: FPGA: Recv ZSGSRD 35309
17-03-17 22:59:50.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.898 -07 000000415 INF: FPGA: Recv ZSGSRD 35312
17-03-17 22:59:50.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.908 -07 000000541 INF: FPGA: Recv ZSGSRD 35309
17-03-17 22:59:50.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.918 -07 000000409 INF: FPGA: Recv ZSGSRD 35310
17-03-17 22:59:50.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:50.928 -07 000000501 INF: FPGA: Recv ZSGSRD 35303
17-03-17 22:59:50.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.938 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:50.938 -07 000000475 INF: FPGA: Recv ZPIEZORD 31144
17-03-17 22:59:50.948 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:50.948 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.571 V. Piezo Error = -9.2 V.
17-03-17 22:59:50.948 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35308 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35308 (-166.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35303 (-166.2 uncal um), Max = 35312 (-166.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:50.948 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35308, posNoise = 4, negNoise = 5
17-03-17 22:59:50.948 -07 000000610 INF: Z Motor: After move to -0.167137, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:50.948 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 22:59:50.948 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:50.948 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:50.948 -07 000000541 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:50.948 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:50.948 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:50.948 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:50.948 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:50.948 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:50.948 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:50.948 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:50.948 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:50.948 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:50.958 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:50.958 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:50.958 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:50.958 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:50.958 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 22:59:50.958 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 22:59:50.968 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 22:59:50.968 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 22:59:50.968 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36688 150\n [Camera]
17-03-17 22:59:51.168 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:51.458 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.041198,
17-03-17 22:59:51.628 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:51.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:51.628 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:51.628 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:51.628 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 22:59:51.638 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:51.638 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:51.638 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:51.638 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:51.638 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 22:59:51.828 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36688 851
17-03-17 22:59:51.978 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:52.018 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 22:59:52.018 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 22:59:52.018 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:52.018 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 22:59:52.018 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 22:59:52.018 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:52.018 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:52.018 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 22:59:52.018 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 22:59:52.028 -07 000000541 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:52.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:52.028 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 22:59:52.198 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:52.198 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:52.198 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:52.198 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:52.198 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 22:59:52.198 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:52.198 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:52.198 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:52.198 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:52.198 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 22:59:52.388 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:52.388 -07 000000429 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:52.388 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36688 150' command took 2 ms to send, 1416 ms to get response, and 1421 ms overall
17-03-17 22:59:52.388 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167606
17-03-17 22:59:52.388 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16761 mm
17-03-17 22:59:52.388 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:52.398 -07 000000415 INF: Z Motor: Entering MoveAbsStepped (DAC = 36613, sync = True, waitForSettling = False)
17-03-17 22:59:52.398 -07 000000415 INF: Z Motor: Moving to -0.167604 mm, started at -0.167149 mm, distance = -0.45 um
17-03-17 22:59:52.398 -07 000000415 INF: FPGA: Xmit ZDACW 36613\n [Z Motor]
17-03-17 22:59:52.398 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 22:59:52.398 -07 000000502 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm
17-03-17 22:59:52.398 -07 000000478 INF: FPGA: Recv ZDACW
17-03-17 22:59:52.408 -07 000000415 INF: FPGA: 'ZDACW 36613' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:52.408 -07 000000415 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:52.408 -07 000000593 INF: FPGA: Recv ZDACR 36613
17-03-17 22:59:52.418 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:52.418 -07 000000415 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:52.418 -07 000000415 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-17 22:59:52.418 -07 000000475 INF: FPGA: Recv YRDPOS 146470
17-03-17 22:59:52.428 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:52.428 -07 000000502 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:52.428 -07 000000502 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:52.428 -07 000000502 INF: Y Motor: Moving 1350 steps-30
17-03-17 22:59:52.428 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:52.588 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 382 ms.
17-03-17 22:59:52.588 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 22:59:52.588 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:52.588 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 22:59:52.588 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 22:59:52.588 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:52.588 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 22:59:52.588 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 22:59:52.588 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 22:59:52.598 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 22:59:52.808 -07 000000478 INF: FPGA: Recv YMVTILE
17-03-17 22:59:52.808 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 379 ms overall
17-03-17 22:59:52.848 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:52.848 -07 000000541 INF: FPGA: Recv YRDPOS 148171
17-03-17 22:59:52.858 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:52.858 -07 000000502 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:52.858 -07 000000502 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 22:59:52.858 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.844 mm, average velocity = 2.215 mm/sec
17-03-17 22:59:53.808 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:53.808 -07 000000448 INF: FPGA: Recv YRDPOS 148171
17-03-17 22:59:53.818 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.818 -07 000000502 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:53.838 -07 000000502 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:53.838 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:53.838 -07 000000502 INF: Y Motor: Moved to 72.3491 after 1445 ms (table move)
17-03-17 22:59:53.838 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167604 mm (DAC = 36613)
17-03-17 22:59:53.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.848 -07 000000576 INF: FPGA: Recv ZSGSRD 35377
17-03-17 22:59:53.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 22:59:53.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.848 -07 000000623 INF: FPGA: Recv ZSGSRD 35380
17-03-17 22:59:53.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:53.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.858 -07 000000486 INF: FPGA: Recv ZSGSRD 35380
17-03-17 22:59:53.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.868 -07 000000448 INF: FPGA: Recv ZSGSRD 35375
17-03-17 22:59:53.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.878 -07 000000482 INF: FPGA: Recv ZSGSRD 35381
17-03-17 22:59:53.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.888 -07 000000576 INF: FPGA: Recv ZSGSRD 35381
17-03-17 22:59:53.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.898 -07 000000475 INF: FPGA: Recv ZSGSRD 35379
17-03-17 22:59:53.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.908 -07 000000541 INF: FPGA: Recv ZSGSRD 35387
17-03-17 22:59:53.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.918 -07 000000448 INF: FPGA: Recv ZSGSRD 35378
17-03-17 22:59:53.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:53.928 -07 000000502 INF: FPGA: Recv ZSGSRD 35377
17-03-17 22:59:53.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.938 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:53.938 -07 000000618 INF: FPGA: Recv ZPIEZORD 31233
17-03-17 22:59:53.948 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:53.948 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.587 V. Piezo Error = -9.1 V.
17-03-17 22:59:53.948 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35380 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35380 (-166.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35375 (-166.7 uncal um), Max = 35387 (-166.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:53.948 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35380, posNoise = 7, negNoise = 5
17-03-17 22:59:53.948 -07 000000610 INF: Z Motor: After move to -0.167604, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:53.948 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 103 ms (allowed 150 ms), total time = 1550 ms
17-03-17 22:59:53.948 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 22:59:53.998 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-17 22:59:53.998 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:53.998 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.167611977586638. ----------
17-03-17 22:59:53.998 -07 000000610 INF: Cycle	70	Tile	16	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:53.998 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36437, sync = True, waitForSettling = True)
17-03-17 22:59:53.998 -07 000000610 INF: Z Motor: Moving to -0.166798 mm, started at -0.167612 mm, distance = 0.81 um
17-03-17 22:59:53.998 -07 000000610 INF: FPGA: Xmit ZDACW 36437\n [Z Motor]
17-03-17 22:59:53.998 -07 000000551 INF: FPGA: Recv ZDACW
17-03-17 22:59:54.008 -07 000000610 INF: FPGA: 'ZDACW 36437' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 22:59:54.008 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:54.008 -07 000000627 INF: FPGA: Recv ZDACR 36437
17-03-17 22:59:54.018 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.018 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:54.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.168 -07 000000576 INF: FPGA: Recv ZSGSRD 35247
17-03-17 22:59:54.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:54.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.178 -07 000000502 INF: FPGA: Recv ZSGSRD 35253
17-03-17 22:59:54.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.188 -07 000000409 INF: FPGA: Recv ZSGSRD 35257
17-03-17 22:59:54.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.198 -07 000000429 INF: FPGA: Recv ZSGSRD 35256
17-03-17 22:59:54.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.208 -07 000000547 INF: FPGA: Recv ZSGSRD 35256
17-03-17 22:59:54.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.218 -07 000000501 INF: FPGA: Recv ZSGSRD 35256
17-03-17 22:59:54.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.228 -07 000000475 INF: FPGA: Recv ZSGSRD 35254
17-03-17 22:59:54.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.238 -07 000000618 INF: FPGA: Recv ZSGSRD 35255
17-03-17 22:59:54.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.248 -07 000000429 INF: FPGA: Recv ZSGSRD 35250
17-03-17 22:59:54.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:54.258 -07 000000502 INF: FPGA: Recv ZSGSRD 35259
17-03-17 22:59:54.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.268 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:54.268 -07 000000448 INF: FPGA: Recv ZPIEZORD 31137
17-03-17 22:59:54.278 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:54.278 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.560 V. Piezo Error = -9.1 V.
17-03-17 22:59:54.278 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35254 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35256 (-165.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35247 (-165.9 uncal um), Max = 35259 (-166.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 22:59:54.278 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35254, posNoise = 5, negNoise = 7
17-03-17 22:59:54.278 -07 000000610 INF: Z Motor: After move to -0.166798, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:54.278 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 22:59:54.278 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:54.278 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:54.278 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:54.278 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:54.278 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:54.278 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:54.278 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:54.278 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:54.278 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:54.278 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:54.278 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:54.278 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:54.288 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 22:59:54.288 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:54.288 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:54.288 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:54.298 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 22:59:54.298 -07 000000627 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:54.298 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 22:59:54.298 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 22:59:54.308 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36613 150\n [Camera]
17-03-17 22:59:54.508 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:54.968 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:54.968 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:54.968 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:54.968 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:54.968 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-17 22:59:54.968 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:54.968 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:54.968 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:54.968 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:54.968 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 22:59:55.158 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36613 849
17-03-17 22:59:55.418 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 450 ms.
17-03-17 22:59:55.418 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 451 ms.
17-03-17 22:59:55.418 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:55.418 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:55.418 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 448 ms.
17-03-17 22:59:55.418 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 449 ms.
17-03-17 22:59:55.418 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:55.428 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:55.428 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 456 ms.
17-03-17 22:59:55.428 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:55.438 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 461 ms.
17-03-17 22:59:55.538 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:55.538 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:55.538 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:55.538 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:55.538 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:55.538 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:55.548 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:55.548 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 22:59:55.548 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:55.548 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 22:59:55.728 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:55.728 -07 000000448 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:55.728 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36613 150' command took 2 ms to send, 1413 ms to get response, and 1422 ms overall
17-03-17 22:59:55.728 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.167257
17-03-17 22:59:55.728 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16726 mm
17-03-17 22:59:55.728 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:55.728 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 22:59:55.728 -07 000000618 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-17 22:59:55.728 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:55.728 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36537, sync = True, waitForSettling = False)
17-03-17 22:59:55.728 -07 000000502 INF: Z Motor: Moving to -0.167256 mm, started at -0.166803 mm, distance = -0.45 um
17-03-17 22:59:55.738 -07 000000502 INF: FPGA: Xmit ZDACW 36537\n [Z Motor]
17-03-17 22:59:55.738 -07 000000486 INF: FPGA: Recv YRDPOS 148171
17-03-17 22:59:55.738 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 22:59:55.738 -07 000000618 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:55.738 -07 000000618 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:55.738 -07 000000618 INF: Y Motor: Moving 1350 steps-28
17-03-17 22:59:55.738 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 22:59:55.748 -07 000000502 INF: FPGA: 'ZDACW 36537' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 22:59:55.748 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:55.748 -07 000000448 INF: FPGA: Recv ZDACR 36537
17-03-17 22:59:55.758 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:55.758 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:55.758 -07 000000502 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-17 22:59:55.928 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 22:59:55.928 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 22:59:55.928 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:55.928 -07 000000547 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 22:59:55.928 -07 000000547 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 22:59:55.928 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:55.928 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:55.928 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-17 22:59:55.938 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:55.938 -07 000000547 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-17 22:59:56.128 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 22:59:56.128 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall
17-03-17 22:59:56.178 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:56.178 -07 000000551 INF: FPGA: Recv YRDPOS 149863
17-03-17 22:59:56.188 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:56.188 -07 000000618 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:56.188 -07 000000618 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-17 22:59:56.188 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.843 mm, average velocity = 2.130 mm/sec
17-03-17 22:59:56.818 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.028963,
17-03-17 22:59:57.028 -07 000000551 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 22:59:57.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 22:59:57.138 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:57.138 -07 000000486 INF: FPGA: Recv YRDPOS 149863
17-03-17 22:59:57.148 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:57.148 -07 000000618 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:57.168 -07 000000618 INF: Y Motor: After move to 73.192604, error = -0.017311, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 22:59:57.168 -07 000000618 INF: Y Motor: Position error after settling (table move) = -35 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 22:59:57.168 -07 000000618 INF: Y Motor: Moved to 73.1753 after 1438 ms (table move)
17-03-17 22:59:57.168 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167256 mm (DAC = 36537)
17-03-17 22:59:57.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.178 -07 000000593 INF: FPGA: Recv ZSGSRD 35328
17-03-17 22:59:57.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:57.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.208 -07 000000478 INF: FPGA: Recv ZSGSRD 35331
17-03-17 22:59:57.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:57.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.218 -07 000000501 INF: FPGA: Recv ZSGSRD 35333
17-03-17 22:59:57.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:57.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.248 -07 000000576 INF: FPGA: Recv ZSGSRD 35321
17-03-17 22:59:57.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 22:59:57.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.258 -07 000000462 INF: FPGA: Recv ZSGSRD 35325
17-03-17 22:59:57.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.268 -07 000000478 INF: FPGA: Recv ZSGSRD 35332
17-03-17 22:59:57.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.278 -07 000000502 INF: FPGA: Recv ZSGSRD 35318
17-03-17 22:59:57.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 2 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.288 -07 000000475 INF: FPGA: Recv ZSGSRD 35330
17-03-17 22:59:57.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.298 -07 000000551 INF: FPGA: Recv ZSGSRD 35324
17-03-17 22:59:57.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.308 -07 000000618 INF: FPGA: Recv ZSGSRD 35324
17-03-17 22:59:57.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.318 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:57.318 -07 000000382 INF: FPGA: Recv ZPIEZORD 31226
17-03-17 22:59:57.328 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.575 V. Piezo Error = -9.0 V.
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.3 um, Read 10 ADC samples: Avg = 35327 (-166.4 uncal um), Error = 0.9 uncal um, Median = 35326 (-166.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35318 (-166.3 uncal um), Max = 35333 (-166.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35327, posNoise = 6, negNoise = 9
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: After move to -0.167256, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 151 ms (allowed 150 ms), total time = 1591 ms
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 151 ms, longer than max expected time of 150 ms
17-03-17 22:59:57.328 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-17 22:59:57.328 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 22:59:57.328 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17529296875, Z-position -0.167271494343124. ----------
17-03-17 22:59:57.328 -07 000000610 INF: Cycle	70	Tile	17	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36361, sync = True, waitForSettling = True)
17-03-17 22:59:57.328 -07 000000610 INF: Z Motor: Moving to -0.166450 mm, started at -0.167271 mm, distance = 0.82 um
17-03-17 22:59:57.328 -07 000000610 INF: FPGA: Xmit ZDACW 36361\n [Z Motor]
17-03-17 22:59:57.328 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 22:59:57.338 -07 000000610 INF: FPGA: 'ZDACW 36361' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 22:59:57.338 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:57.338 -07 000000547 INF: FPGA: Recv ZDACR 36361
17-03-17 22:59:57.348 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.348 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 22:59:57.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.498 -07 000000541 INF: FPGA: Recv ZSGSRD 35203
17-03-17 22:59:57.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 22:59:57.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.508 -07 000000475 INF: FPGA: Recv ZSGSRD 35199
17-03-17 22:59:57.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.518 -07 000000409 INF: FPGA: Recv ZSGSRD 35207
17-03-17 22:59:57.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.528 -07 000000623 INF: FPGA: Recv ZSGSRD 35205
17-03-17 22:59:57.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.538 -07 000000551 INF: FPGA: Recv ZSGSRD 35202
17-03-17 22:59:57.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.548 -07 000000478 INF: FPGA: Recv ZSGSRD 35202
17-03-17 22:59:57.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.558 -07 000000475 INF: FPGA: Recv ZSGSRD 35200
17-03-17 22:59:57.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.568 -07 000000448 INF: FPGA: Recv ZSGSRD 35197
17-03-17 22:59:57.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.578 -07 000000482 INF: FPGA: Recv ZSGSRD 35198
17-03-17 22:59:57.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 22:59:57.588 -07 000000462 INF: FPGA: Recv ZSGSRD 35206
17-03-17 22:59:57.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 22:59:57.598 -07 000000502 INF: FPGA: Recv ZPIEZORD 31031
17-03-17 22:59:57.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 22:59:57.608 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.548 V. Piezo Error = -9.2 V.
17-03-17 22:59:57.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.4 um, Read 10 ADC samples: Avg = 35202 (-165.6 uncal um), Error = 0.8 uncal um, Median = 35202 (-165.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35197 (-165.6 uncal um), Max = 35207 (-165.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 22:59:57.608 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35202, posNoise = 5, negNoise = 5
17-03-17 22:59:57.608 -07 000000610 INF: Z Motor: After move to -0.166450, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 22:59:57.608 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 22:59:57.608 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 22:59:57.608 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 22:59:57.608 -07 000000551 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 22:59:57.608 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 22:59:57.608 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 22:59:57.608 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 22:59:57.608 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 22:59:57.608 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 22:59:57.608 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 22:59:57.608 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 22:59:57.608 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 22:59:57.608 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 22:59:57.608 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 22:59:57.608 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 22:59:57.618 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 22:59:57.618 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 22:59:57.628 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-17 22:59:57.628 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 22:59:57.628 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 22:59:57.628 -07 000000547 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 22:59:57.638 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36537 150\n [Camera]
17-03-17 22:59:57.828 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 22:59:58.298 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 22:59:58.298 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 22:59:58.298 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:58.298 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:58.298 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-17 22:59:58.298 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 22:59:58.298 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 22:59:58.298 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:58.298 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:58.298 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-17 22:59:58.488 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36537 849
17-03-17 22:59:58.638 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 22:59:58.678 -07 000000547 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 22:59:58.678 -07 000000547 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 22:59:58.678 -07 000000547 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:58.678 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 22:59:58.678 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 22:59:58.678 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:58.678 -07 000000547 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:58.678 -07 000000547 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 22:59:58.678 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:58.688 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 22:59:58.868 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 22:59:58.868 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 22:59:58.868 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 22:59:58.868 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 22:59:58.868 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-17 22:59:58.868 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 22:59:58.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 22:59:58.868 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 22:59:58.868 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 22:59:58.868 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 22:59:59.058 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 22:59:59.058 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 22:59:59.058 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36537 150' command took 2 ms to send, 1412 ms to get response, and 1421 ms overall
17-03-17 22:59:59.058 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166859
17-03-17 22:59:59.058 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16686 mm
17-03-17 22:59:59.058 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 22:59:59.068 -07 000000623 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 22:59:59.068 -07 000000623 INF: Y Motor: Moving to 74.0226 mm, started at 73.1753 mm, delta = 0.8473 mm
17-03-17 22:59:59.068 -07 000000623 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:59.068 -07 000000541 INF: Z Motor: Entering MoveAbsStepped (DAC = 36450, sync = True, waitForSettling = False)
17-03-17 22:59:59.068 -07 000000541 INF: Z Motor: Moving to -0.166857 mm, started at -0.166468 mm, distance = -0.39 um
17-03-17 22:59:59.068 -07 000000478 INF: FPGA: Recv YRDPOS 149864
17-03-17 22:59:59.078 -07 000000623 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:59.078 -07 000000623 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:59.078 -07 000000541 INF: FPGA: Xmit ZDACW 36450\n [Z Motor]
17-03-17 22:59:59.078 -07 000000627 INF: FPGA: Recv ZDACW
17-03-17 22:59:59.078 -07 000000623 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 22:59:59.078 -07 000000623 INF: Y Motor: Moving 1355 steps-35
17-03-17 22:59:59.088 -07 000000541 INF: FPGA: 'ZDACW 36450' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 22:59:59.088 -07 000000623 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 22:59:59.098 -07 000000541 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 22:59:59.098 -07 000000448 INF: FPGA: Recv ZDACR 36450
17-03-17 22:59:59.108 -07 000000541 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 22:59:59.108 -07 000000541 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-17 22:59:59.248 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 22:59:59.248 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 22:59:59.248 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:59.248 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 22:59:59.248 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 22:59:59.248 -07 000000551 INF: Camera: CopyActivePixFullImage start.
17-03-17 22:59:59.248 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:59.248 -07 000000551 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 22:59:59.248 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 22:59:59.258 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 22:59:59.458 -07 000000482 INF: FPGA: Recv YMVTILE
17-03-17 22:59:59.458 -07 000000623 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 385 ms overall
17-03-17 22:59:59.508 -07 000000623 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 22:59:59.508 -07 000000475 INF: FPGA: Recv YRDPOS 151567
17-03-17 22:59:59.518 -07 000000623 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 22:59:59.518 -07 000000623 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 22:59:59.518 -07 000000623 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-17 22:59:59.518 -07 000000623 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.847 mm, average velocity = 2.201 mm/sec
17-03-17 23:00:00.468 -07 000000623 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:00.468 -07 000000618 INF: FPGA: Recv YRDPOS 151568
17-03-17 23:00:00.478 -07 000000623 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:00.478 -07 000000623 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:00.488 -07 000000623 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:00.488 -07 000000623 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 23:00:00.488 -07 000000623 INF: Y Motor: Moved to 74.0078 after 1428 ms (table move)
17-03-17 23:00:00.498 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166857 mm (DAC = 36450)
17-03-17 23:00:00.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.498 -07 000000462 INF: FPGA: Recv ZSGSRD 35268
17-03-17 23:00:00.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:00:00.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.508 -07 000000551 INF: FPGA: Recv ZSGSRD 35268
17-03-17 23:00:00.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.518 -07 000000593 INF: FPGA: Recv ZSGSRD 35266
17-03-17 23:00:00.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.528 -07 000000415 INF: FPGA: Recv ZSGSRD 35265
17-03-17 23:00:00.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.538 -07 000000501 INF: FPGA: Recv ZSGSRD 35267
17-03-17 23:00:00.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.548 -07 000000475 INF: FPGA: Recv ZSGSRD 35257
17-03-17 23:00:00.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.558 -07 000000486 INF: FPGA: Recv ZSGSRD 35261
17-03-17 23:00:00.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.568 -07 000000541 INF: FPGA: Recv ZSGSRD 35265
17-03-17 23:00:00.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.578 -07 000000576 INF: FPGA: Recv ZSGSRD 35267
17-03-17 23:00:00.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.588 -07 000000429 INF: FPGA: Recv ZSGSRD 35271
17-03-17 23:00:00.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.598 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:00.598 -07 000000502 INF: FPGA: Recv ZPIEZORD 31168
17-03-17 23:00:00.608 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.608 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.562 V. Piezo Error = -9.0 V.
17-03-17 23:00:00.608 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.9 um, Read 10 ADC samples: Avg = 35266 (-166.0 uncal um), Error = 0.8 uncal um, Median = 35266 (-166.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35257 (-166.0 uncal um), Max = 35271 (-166.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 23:00:00.608 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35266, posNoise = 5, negNoise = 9
17-03-17 23:00:00.608 -07 000000610 INF: Z Motor: After move to -0.166857, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:00.608 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 108 ms (allowed 150 ms), total time = 1539 ms
17-03-17 23:00:00.608 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:00.658 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-17 23:00:00.658 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:00.658 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.166879617402477. ----------
17-03-17 23:00:00.658 -07 000000610 INF: Cycle	70	Tile	18	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:00.658 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36274, sync = True, waitForSettling = True)
17-03-17 23:00:00.658 -07 000000610 INF: Z Motor: Moving to -0.166052 mm, started at -0.166880 mm, distance = 0.83 um
17-03-17 23:00:00.658 -07 000000610 INF: FPGA: Xmit ZDACW 36274\n [Z Motor]
17-03-17 23:00:00.658 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 23:00:00.668 -07 000000610 INF: FPGA: 'ZDACW 36274' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:00:00.668 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:00.668 -07 000000627 INF: FPGA: Recv ZDACR 36274
17-03-17 23:00:00.678 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.678 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:00.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.828 -07 000000576 INF: FPGA: Recv ZSGSRD 35142
17-03-17 23:00:00.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.838 -07 000000486 INF: FPGA: Recv ZSGSRD 35141
17-03-17 23:00:00.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.848 -07 000000623 INF: FPGA: Recv ZSGSRD 35134
17-03-17 23:00:00.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.858 -07 000000415 INF: FPGA: Recv ZSGSRD 35140
17-03-17 23:00:00.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.868 -07 000000429 INF: FPGA: Recv ZSGSRD 35132
17-03-17 23:00:00.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.878 -07 000000502 INF: FPGA: Recv ZSGSRD 35139
17-03-17 23:00:00.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.888 -07 000000409 INF: FPGA: Recv ZSGSRD 35135
17-03-17 23:00:00.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.898 -07 000000618 INF: FPGA: Recv ZSGSRD 35142
17-03-17 23:00:00.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.908 -07 000000486 INF: FPGA: Recv ZSGSRD 35140
17-03-17 23:00:00.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:00.918 -07 000000627 INF: FPGA: Recv ZSGSRD 35142
17-03-17 23:00:00.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:00.928 -07 000000502 INF: FPGA: Recv ZPIEZORD 31003
17-03-17 23:00:00.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:00.938 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.535 V. Piezo Error = -9.1 V.
17-03-17 23:00:00.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.1 um, Read 10 ADC samples: Avg = 35139 (-165.2 uncal um), Error = 0.9 uncal um, Median = 35140 (-165.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35132 (-165.2 uncal um), Max = 35142 (-165.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:00.938 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35139, posNoise = 3, negNoise = 7
17-03-17 23:00:00.938 -07 000000610 INF: Z Motor: After move to -0.166052, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:00.938 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 23:00:00.938 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:00.938 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:00.938 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:00.938 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:00.938 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:00.938 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:00.938 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:00.938 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:00.938 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:00.938 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:00.938 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:00.938 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:00.948 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:00:00.948 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:00.948 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:00.948 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:00.958 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 23:00:00.958 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 23:00:00.958 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 23:00:00.958 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 23:00:00.958 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36450 150\n [Camera]
17-03-17 23:00:01.158 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:01.628 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 658
17-03-17 23:00:01.628 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 658
17-03-17 23:00:01.628 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:01.628 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:01.628 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 23:00:01.638 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 658
17-03-17 23:00:01.638 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 658
17-03-17 23:00:01.638 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:01.638 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:01.638 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 23:00:01.818 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36450 849
17-03-17 23:00:01.968 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:02.008 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 23:00:02.008 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 23:00:02.008 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:02.008 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 378 ms.
17-03-17 23:00:02.008 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 23:00:02.018 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:02.018 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:02.018 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 23:00:02.018 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:02.028 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 23:00:02.028 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:02.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:02.178 -07 000000409 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.997626,
17-03-17 23:00:02.188 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:02.188 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:02.198 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:02.198 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:02.198 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 23:00:02.198 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:02.198 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:02.198 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:02.198 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:02.198 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 23:00:02.388 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:02.388 -07 000000409 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:02.388 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36450 150' command took 2 ms to send, 1411 ms to get response, and 1421 ms overall
17-03-17 23:00:02.388 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-17 23:00:02.388 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0078125, Z-Position -0.166063742460473. ------
17-03-17 23:00:02.388 -07 000000551 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:02.388 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.17248 mm
17-03-17 23:00:02.388 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:02.388 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:02.398 -07 000000551 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:02.398 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 37679, sync = True, waitForSettling = False)
17-03-17 23:00:02.398 -07 000000547 INF: Z Motor: Moving to -0.172483 mm, started at -0.166064 mm, distance = -6.42 um
17-03-17 23:00:02.398 -07 000000482 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 23:00:02.398 -07 000000482 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-17 23:00:02.398 -07 000000547 INF: FPGA: Xmit ZDACW 37679\n [Z Motor]
17-03-17 23:00:02.398 -07 000000623 INF: FPGA: Recv ZDACW
17-03-17 23:00:02.408 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:02.408 -07 000000547 INF: FPGA: 'ZDACW 37679' command took 3 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:02.408 -07 000000486 INF: FPGA: Recv YRDPOS 151568
17-03-17 23:00:02.418 -07 000000551 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:00:02.418 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-17 23:00:02.418 -07 000000482 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:02.418 -07 000000482 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:02.418 -07 000000482 INF: Y Motor: Moving 1352 steps-31
17-03-17 23:00:02.428 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:02.428 -07 000000429 INF: FPGA: Recv ZDACR 37679
17-03-17 23:00:02.438 -07 000000482 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:02.438 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:00:02.438 -07 000000547 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-17 23:00:02.578 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 23:00:02.578 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 23:00:02.578 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:02.578 -07 000000541 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 23:00:02.578 -07 000000541 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 23:00:02.578 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:02.588 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:02.588 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 23:00:02.588 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:02.598 -07 000000541 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 23:00:02.618 -07 000000409 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:00:02.618 -07 000000551 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 23:00:02.808 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 23:00:02.808 -07 000000482 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:00:02.838 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:02.838 -07 000000541 INF: FPGA: Recv YRDPOS 153255
17-03-17 23:00:02.848 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:02.848 -07 000000482 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:02.848 -07 000000482 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-17 23:00:02.848 -07 000000482 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec
17-03-17 23:00:03.798 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:03.798 -07 000000623 INF: FPGA: Recv YRDPOS 153255
17-03-17 23:00:03.808 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.808 -07 000000482 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:03.818 -07 000000482 INF: Y Motor: After move to 74.852608, error = -0.021065, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:03.818 -07 000000482 INF: Y Motor: Position error after settling (table move) = -43 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:03.818 -07 000000482 INF: Y Motor: Moved to 74.8315 after 1426 ms (table move)
17-03-17 23:00:03.828 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172483 mm (DAC = 37679)
17-03-17 23:00:03.828 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.828 -07 000000462 INF: FPGA: Recv ZSGSRD 36146
17-03-17 23:00:03.838 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:03.838 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.838 -07 000000547 INF: FPGA: Recv ZSGSRD 36137
17-03-17 23:00:03.848 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.848 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.848 -07 000000409 INF: FPGA: Recv ZSGSRD 36136
17-03-17 23:00:03.858 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.858 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.858 -07 000000576 INF: FPGA: Recv ZSGSRD 36141
17-03-17 23:00:03.868 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.868 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.868 -07 000000415 INF: FPGA: Recv ZSGSRD 36140
17-03-17 23:00:03.878 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.878 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.878 -07 000000501 INF: FPGA: Recv ZSGSRD 36149
17-03-17 23:00:03.888 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.888 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.888 -07 000000623 INF: FPGA: Recv ZSGSRD 36149
17-03-17 23:00:03.898 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.898 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.898 -07 000000551 INF: FPGA: Recv ZSGSRD 36141
17-03-17 23:00:03.908 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:03.908 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.908 -07 000000576 INF: FPGA: Recv ZSGSRD 36133
17-03-17 23:00:03.918 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.918 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:03.918 -07 000000448 INF: FPGA: Recv ZSGSRD 36131
17-03-17 23:00:03.928 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.928 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:03.928 -07 000000501 INF: FPGA: Recv ZPIEZORD 32324
17-03-17 23:00:03.938 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:03.938 -07 000000502 INF: Z Motor: Piezo is near 49.1 V (nominally 0 to 100 V), expect near 57.5 V, since DAC is at 5.749 V. Piezo Error = -8.4 V.
17-03-17 23:00:03.938 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.5 um, Read 10 ADC samples: Avg = 36140 (-171.6 uncal um), Error = 0.9 uncal um, Median = 36140 (-171.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 36131 (-171.6 uncal um), Max = 36149 (-171.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 23:00:03.938 -07 000000502 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36140, posNoise = 9, negNoise = 9
17-03-17 23:00:03.938 -07 000000502 INF: Z Motor: After move to -0.172483, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:03.938 -07 000000502 INF: Z Motor: Settle wait time = 1431 ms, measure time = 109 ms (allowed 150 ms), total time = 1540 ms
17-03-17 23:00:03.938 -07 000000502 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:03.988 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-17 23:00:03.988 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:03.988 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:03.988 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:03.988 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:03.988 -07 000000541 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:03.988 -07 000000382 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:00:03.988 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:03.988 -07 000000382 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:03.988 -07 000000382 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:00:03.998 -07 000000382 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:03.998 -07 000000382 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:00:04.008 -07 000000382 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 23:00:04.008 -07 000000382 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 23:00:04.008 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:00:04.058 -07 000000478 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:00:04.258 -07 000000409 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:00:04.258 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:00:04.258 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:00:04.258 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-17 23:00:04.288 -07 000000623 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:00:04.298 -07 000000382 INF: FPGA: Recv CAMSNAP
17-03-17 23:00:04.298 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 285 ms overall
17-03-17 23:00:04.378 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 126 ms.
17-03-17 23:00:04.378 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:04.388 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:00:04.388 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 23:00:04.398 -07 000000551 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:04.398 -07 000000429 INF: Autofocus start
17-03-17 23:00:04.398 -07 000000429 INF: MeasureProfile start
17-03-17 23:00:04.398 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:04.408 -07 000000551 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:04.408 -07 000000551 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:00:04.408 -07 000000429 INF: MeasureProfile done
17-03-17 23:00:04.408 -07 000000429 INF: X=16  Z correction [um]=0.01042744
17-03-17 23:00:04.408 -07 000000429 INF: Autofocus finished
17-03-17 23:00:04.608 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:00:04.608 -07 000000551 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:00:04.608 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83154296875, Z-position -0.172494378814376. ----------
17-03-17 23:00:04.608 -07 000000610 INF: Cycle	70	Tile	19	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:04.618 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36194, sync = True, waitForSettling = True)
17-03-17 23:00:04.618 -07 000000610 INF: Z Motor: Moving to -0.165686 mm, started at -0.172494 mm, distance = 6.81 um
17-03-17 23:00:04.618 -07 000000610 INF: FPGA: Xmit ZDACW 36194\n [Z Motor]
17-03-17 23:00:04.618 -07 000000547 INF: FPGA: Recv ZDACW
17-03-17 23:00:04.628 -07 000000610 INF: FPGA: 'ZDACW 36194' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:04.628 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:04.628 -07 000000486 INF: FPGA: Recv ZDACR 36194
17-03-17 23:00:04.638 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.638 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:04.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.788 -07 000000576 INF: FPGA: Recv ZSGSRD 35083
17-03-17 23:00:04.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:04.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.798 -07 000000593 INF: FPGA: Recv ZSGSRD 35082
17-03-17 23:00:04.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.808 -07 000000623 INF: FPGA: Recv ZSGSRD 35081
17-03-17 23:00:04.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.818 -07 000000547 INF: FPGA: Recv ZSGSRD 35083
17-03-17 23:00:04.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.828 -07 000000618 INF: FPGA: Recv ZSGSRD 35078
17-03-17 23:00:04.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.838 -07 000000541 INF: FPGA: Recv ZSGSRD 35085
17-03-17 23:00:04.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.848 -07 000000502 INF: FPGA: Recv ZSGSRD 35081
17-03-17 23:00:04.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.858 -07 000000482 INF: FPGA: Recv ZSGSRD 35085
17-03-17 23:00:04.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.868 -07 000000448 INF: FPGA: Recv ZSGSRD 35080
17-03-17 23:00:04.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:04.878 -07 000000382 INF: FPGA: Recv ZSGSRD 35079
17-03-17 23:00:04.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.888 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:04.888 -07 000000462 INF: FPGA: Recv ZPIEZORD 30905
17-03-17 23:00:04.898 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:04.898 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.2 V, since DAC is at 5.523 V. Piezo Error = -9.2 V.
17-03-17 23:00:04.898 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.7 um, Read 10 ADC samples: Avg = 35082 (-164.8 uncal um), Error = 0.9 uncal um, Median = 35082 (-164.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35078 (-164.8 uncal um), Max = 35085 (-164.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 23:00:04.898 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35082, posNoise = 3, negNoise = 4
17-03-17 23:00:04.898 -07 000000610 INF: Z Motor: After move to -0.165686, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:04.898 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 23:00:04.898 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:04.898 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:04.898 -07 000000409 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:04.898 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:04.898 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:04.898 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:04.898 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:04.898 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:04.898 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 23:00:04.898 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:04.898 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:04.898 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:04.908 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:04.908 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:04.908 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:04.908 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:04.918 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 23:00:04.918 -07 000000448 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:00:04.918 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 23:00:04.918 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 23:00:04.918 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 36370 150\n [Camera]
17-03-17 23:00:05.118 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:05.588 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:05.588 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:05.588 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:05.588 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:05.588 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:05.588 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:05.588 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 23:00:05.588 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:05.588 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:05.588 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 23:00:05.778 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36370 849
17-03-17 23:00:05.928 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1000
17-03-17 23:00:05.968 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 23:00:05.968 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 23:00:05.968 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:05.968 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:05.968 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 23:00:05.968 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 23:00:05.968 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:05.978 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:05.978 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 23:00:05.978 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 23:00:06.148 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:06.148 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:06.148 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:06.148 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:06.148 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) start.
17-03-17 23:00:06.158 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:06.158 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:06.158 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:06.158 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:06.158 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-17 23:00:06.338 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:06.348 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:06.348 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 36370 150' command took 2 ms to send, 1420 ms to get response, and 1425 ms overall
17-03-17 23:00:06.538 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2451345512, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 23:00:06.538 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 23:00:06.538 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:06.538 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 379 ms.
17-03-17 23:00:06.538 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-17 23:00:06.538 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:06.538 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:06.538 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 23:00:06.538 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-17 23:00:06.538 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 23:00:06.548 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 23:00:06.588 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-17 23:00:06.588 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 23:00:06.628 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-17 23:00:06.628 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-17 23:00:06.628 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-17 23:00:06.628 -07 000000448 INF: FPGA: Recv EMCUR 
17-03-17 23:00:06.638 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 23:00:06.638 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-17 23:00:07.028 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:07.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:07.138 -07 000000382 INF: FPGA: Recv EMIN
17-03-17 23:00:07.138 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-17 23:00:07.138 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-17 23:00:07.138 -07 000000618 INF: FPGA: Recv EMCUR 
17-03-17 23:00:07.148 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:00:07.148 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:00:07.148 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83154296875, Z-Position -0.165697562368393. ------
17-03-17 23:00:07.148 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:07.148 -07 000000547 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.14021 mm
17-03-17 23:00:07.148 -07 000000547 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:07.148 -07 000000415 INF: Z Motor: Entering MoveAbsStepped (DAC = 30630, sync = True, waitForSettling = False)
17-03-17 23:00:07.148 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-17 23:00:07.148 -07 000000448 INF: Y Motor: Moving to 59.9126 mm, started at 74.8315 mm, delta = -14.9189 mm
17-03-17 23:00:07.148 -07 000000627 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:07.148 -07 000000415 INF: Z Motor: Moving to -0.140215 mm, started at -0.165698 mm, distance = 25.48 um
17-03-17 23:00:07.158 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:07.158 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:00:07.158 -07 000000627 INF: FPGA: Recv YRDPOS 153256
17-03-17 23:00:07.168 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 23:00:07.168 -07 000000448 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:07.168 -07 000000486 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:00:07.168 -07 000000448 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-17 23:00:07.168 -07 000000448 INF: Y Motor: Moving to 122701 encoder counts
17-03-17 23:00:07.178 -07 000000415 INF: FPGA: Xmit ZDACW 30630\n [Z Motor]
17-03-17 23:00:07.178 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 23:00:07.188 -07 000000415 INF: FPGA: 'ZDACW 30630' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:00:07.188 -07 000000448 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-17 23:00:07.198 -07 000000415 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:07.198 -07 000000593 INF: FPGA: Recv ZDACR 30630
17-03-17 23:00:07.208 -07 000000415 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:07.208 -07 000000415 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet))
17-03-17 23:00:07.368 -07 000000482 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:00:07.368 -07 000000486 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 212 ms overall
17-03-17 23:00:07.538 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.009895,
17-03-17 23:00:08.808 -07 000000501 INF: FPGA: Recv YMVTO 122703 23904
17-03-17 23:00:08.808 -07 000000448 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1619 ms to get response, and 1644 ms overall
17-03-17 23:00:08.808 -07 000000448 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-17 23:00:08.808 -07 000000448 INF: Y Motor: To move from 74.832 to 59.913 (-14.919 mm) should take 23871 steps, but required 23904 steps (14.940 mm). Slippage = 0.021 mm (0.00%).
17-03-17 23:00:08.808 -07 000000448 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1644 ms, distance = 14.919 mm, average velocity = 9.075 mm/sec
17-03-17 23:00:11.658 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:11.658 -07 000000415 INF: FPGA: Recv YRDPOS 122697
17-03-17 23:00:11.668 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:11.668 -07 000000448 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:11.698 -07 000000448 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:11.698 -07 000000448 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm)
17-03-17 23:00:11.698 -07 000000448 INF: Y Motor: Moved to 59.9106 after 4545 ms
17-03-17 23:00:11.698 -07 000000547 INF: Z Motor: EndOfMoveAbsStepped: target = -0.140215 mm (DAC = 30630)
17-03-17 23:00:11.698 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.698 -07 000000486 INF: FPGA: Recv ZSGSRD 31113
17-03-17 23:00:11.708 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:11.708 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.708 -07 000000382 INF: FPGA: Recv ZSGSRD 31118
17-03-17 23:00:11.718 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.718 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.718 -07 000000623 INF: FPGA: Recv ZSGSRD 31113
17-03-17 23:00:11.728 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.728 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.728 -07 000000541 INF: FPGA: Recv ZSGSRD 31117
17-03-17 23:00:11.738 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.738 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.738 -07 000000501 INF: FPGA: Recv ZSGSRD 31112
17-03-17 23:00:11.748 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.748 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.748 -07 000000486 INF: FPGA: Recv ZSGSRD 31117
17-03-17 23:00:11.758 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.758 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.758 -07 000000576 INF: FPGA: Recv ZSGSRD 31128
17-03-17 23:00:11.768 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.768 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.768 -07 000000618 INF: FPGA: Recv ZSGSRD 31116
17-03-17 23:00:11.778 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.778 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.778 -07 000000623 INF: FPGA: Recv ZSGSRD 31117
17-03-17 23:00:11.788 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.788 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:11.788 -07 000000382 INF: FPGA: Recv ZSGSRD 31115
17-03-17 23:00:11.798 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.798 -07 000000547 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:11.798 -07 000000486 INF: FPGA: Recv ZPIEZORD 26703
17-03-17 23:00:11.808 -07 000000547 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:11.808 -07 000000547 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.7 V, since DAC is at 4.674 V. Piezo Error = -9.7 V.
17-03-17 23:00:11.808 -07 000000547 INF: Z Motor: ReadAdcAverage: Commanded Z = -140.2 um, Read 10 ADC samples: Avg = 31117 (-139.4 uncal um), Error = 0.8 uncal um, Median = 31116 (-139.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 31112 (-139.4 uncal um), Max = 31128 (-139.5 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:00:11.808 -07 000000547 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31117, posNoise = 11, negNoise = 5
17-03-17 23:00:11.808 -07 000000547 INF: Z Motor: After move to -0.140215, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:11.808 -07 000000547 INF: Z Motor: Settle wait time = 4545 ms, measure time = 105 ms (allowed 150 ms), total time = 4650 ms
17-03-17 23:00:11.808 -07 000000547 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:11.858 -07 000000547 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4705 ms
17-03-17 23:00:11.858 -07 000000547 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:11.858 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:11.858 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:11.858 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:11.858 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:00:11.858 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:11.858 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:11.858 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:00:11.858 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-17 23:00:11.878 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 19 ms.
17-03-17 23:00:11.878 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:00:11.888 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:11.888 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:00:11.888 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-17 23:00:11.888 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 30 ms.
17-03-17 23:00:11.898 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:00:11.938 -07 000000486 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:00:12.028 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:12.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:12.138 -07 000000541 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:00:12.138 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:00:12.138 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:00:12.138 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) start.
17-03-17 23:00:12.178 -07 000000502 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:00:12.178 -07 000000627 INF: FPGA: Recv CAMSNAP
17-03-17 23:00:12.178 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 275 ms to get response, and 284 ms overall
17-03-17 23:00:12.258 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 23:00:12.258 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:12.258 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 23:00:12.258 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 116 ms.
17-03-17 23:00:12.278 -07 000000478 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:12.278 -07 000000475 INF: Image SNR check: start
17-03-17 23:00:12.278 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:12.288 -07 000000478 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:12.288 -07 000000478 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:00:12.298 -07 000000475 INF: Image SNR check: pass  [peak (Max-Min)=55.31]
17-03-17 23:00:12.298 -07 000000475 INF: Autofocus start
17-03-17 23:00:12.298 -07 000000475 INF: MeasureProfile start
17-03-17 23:00:12.308 -07 000000475 INF: MeasureProfile done
17-03-17 23:00:12.308 -07 000000475 INF: X=0  Z correction [um]=-0.02394831
17-03-17 23:00:12.308 -07 000000475 INF: Autofocus finished
17-03-17 23:00:12.488 -07 000000551 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:00:12.488 -07 000000478 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:00:12.488 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.140225561226311. ----------
17-03-17 23:00:12.488 -07 000000610 INF: Cycle	70	Tile	1	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:12.498 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29137, sync = True, waitForSettling = True)
17-03-17 23:00:12.498 -07 000000610 INF: Z Motor: Moving to -0.133381 mm, started at -0.140226 mm, distance = 6.84 um
17-03-17 23:00:12.498 -07 000000610 INF: FPGA: Xmit ZDACW 29137\n [Z Motor]
17-03-17 23:00:12.498 -07 000000502 INF: FPGA: Recv ZDACW
17-03-17 23:00:12.508 -07 000000610 INF: FPGA: 'ZDACW 29137' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:12.508 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:12.508 -07 000000593 INF: FPGA: Recv ZDACR 29137
17-03-17 23:00:12.518 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.518 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:12.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.668 -07 000000478 INF: FPGA: Recv ZSGSRD 30048
17-03-17 23:00:12.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:12.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.678 -07 000000547 INF: FPGA: Recv ZSGSRD 30053
17-03-17 23:00:12.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.688 -07 000000429 INF: FPGA: Recv ZSGSRD 30053
17-03-17 23:00:12.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.698 -07 000000486 INF: FPGA: Recv ZSGSRD 30051
17-03-17 23:00:12.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.708 -07 000000448 INF: FPGA: Recv ZSGSRD 30047
17-03-17 23:00:12.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.718 -07 000000618 INF: FPGA: Recv ZSGSRD 30057
17-03-17 23:00:12.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.728 -07 000000502 INF: FPGA: Recv ZSGSRD 30047
17-03-17 23:00:12.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.738 -07 000000382 INF: FPGA: Recv ZSGSRD 30049
17-03-17 23:00:12.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.748 -07 000000627 INF: FPGA: Recv ZSGSRD 30049
17-03-17 23:00:12.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:12.758 -07 000000541 INF: FPGA: Recv ZSGSRD 30049
17-03-17 23:00:12.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.768 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:12.768 -07 000000482 INF: FPGA: Recv ZPIEZORD 25568
17-03-17 23:00:12.778 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:12.778 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.446 V. Piezo Error = -9.8 V.
17-03-17 23:00:12.778 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.4 um, Read 10 ADC samples: Avg = 30050 (-132.6 uncal um), Error = 0.8 uncal um, Median = 30049 (-132.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30047 (-132.6 uncal um), Max = 30057 (-132.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 23:00:12.778 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30050, posNoise = 7, negNoise = 3
17-03-17 23:00:12.778 -07 000000610 INF: Z Motor: After move to -0.133381, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:12.778 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 23:00:12.778 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:12.778 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:12.778 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:12.778 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:12.778 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:12.778 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:12.778 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:12.778 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:12.778 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 23:00:12.778 -07 000000541 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-17 23:00:12.778 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:00:12.778 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:12.788 -07 000000448 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:12.788 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:12.798 -07 000000448 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 23:00:12.798 -07 000000448 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 23:00:12.798 -07 000000541 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-17 23:00:12.798 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:12.808 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:00:12.808 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:12.808 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 23:00:12.818 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-17 23:00:12.818 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 29314 150\n [Camera]
17-03-17 23:00:12.898 -07 000000415 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.0344,
17-03-17 23:00:13.018 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:13.478 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:13.478 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:13.478 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:13.478 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:13.478 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) start.
17-03-17 23:00:13.478 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:13.478 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:13.478 -07 000000551 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:13.478 -07 000000551 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:13.478 -07 000000551 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) start.
17-03-17 23:00:13.668 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29314 849
17-03-17 23:00:13.818 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:13.868 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2550140976, 0x0, 391868352) end. Duration was 392 ms.
17-03-17 23:00:13.868 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 23:00:13.868 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:13.878 -07 000000551 INF: Camera: sBCa_ReadImage(785074704, 2585563240, 0x0, 418435064) end. Duration was 389 ms.
17-03-17 23:00:13.878 -07 000000551 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 23:00:13.878 -07 000000551 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:13.878 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:13.878 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 23:00:13.878 -07 000000551 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:13.888 -07 000000551 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 23:00:14.048 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:14.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:14.048 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:14.048 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:14.048 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) start.
17-03-17 23:00:14.048 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:14.048 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:14.048 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:14.048 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:14.048 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) start.
17-03-17 23:00:14.238 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:14.238 -07 000000551 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:14.238 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 29314 150' command took 2 ms to send, 1414 ms to get response, and 1422 ms overall
17-03-17 23:00:14.238 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133548
17-03-17 23:00:14.238 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13355 mm
17-03-17 23:00:14.238 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:14.238 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-17 23:00:14.238 -07 000000627 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm
17-03-17 23:00:14.248 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:14.248 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 29174, sync = True, waitForSettling = False)
17-03-17 23:00:14.248 -07 000000502 INF: Z Motor: Moving to -0.133550 mm, started at -0.133371 mm, distance = -0.18 um
17-03-17 23:00:14.248 -07 000000409 INF: FPGA: Recv YRDPOS 122697
17-03-17 23:00:14.258 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:14.258 -07 000000502 INF: FPGA: Xmit ZDACW 29174\n [Z Motor]
17-03-17 23:00:14.258 -07 000000627 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:14.258 -07 000000627 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:14.258 -07 000000627 INF: Y Motor: Moving 1331 steps2
17-03-17 23:00:14.258 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 23:00:14.268 -07 000000502 INF: FPGA: 'ZDACW 29174' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:14.268 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:14.268 -07 000000482 INF: FPGA: Recv ZDACR 29174
17-03-17 23:00:14.278 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:14.278 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:14.278 -07 000000502 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 23:00:14.448 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2684358704, 0x0, 418435064) end. Duration was 395 ms.
17-03-17 23:00:14.448 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-17 23:00:14.448 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:14.448 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2620985504, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 23:00:14.448 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 23:00:14.448 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:14.448 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:14.458 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 23:00:14.458 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-17 23:00:14.458 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-17 23:00:14.648 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-17 23:00:14.648 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:00:14.688 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:14.688 -07 000000475 INF: FPGA: Recv YRDPOS 124380
17-03-17 23:00:14.698 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:14.698 -07 000000627 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:14.698 -07 000000627 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-17 23:00:14.698 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.832 mm, average velocity = 2.090 mm/sec
17-03-17 23:00:15.648 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:15.648 -07 000000462 INF: FPGA: Recv YRDPOS 124380
17-03-17 23:00:15.658 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:15.658 -07 000000627 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:15.678 -07 000000627 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:15.678 -07 000000627 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:15.678 -07 000000627 INF: Y Motor: Moved to 60.7324 after 1438 ms (table move)
17-03-17 23:00:15.678 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133550 mm (DAC = 29174)
17-03-17 23:00:15.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.688 -07 000000415 INF: FPGA: Recv ZSGSRD 30088
17-03-17 23:00:15.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:15.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.698 -07 000000429 INF: FPGA: Recv ZSGSRD 30082
17-03-17 23:00:15.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.708 -07 000000409 INF: FPGA: Recv ZSGSRD 30081
17-03-17 23:00:15.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.718 -07 000000462 INF: FPGA: Recv ZSGSRD 30081
17-03-17 23:00:15.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.728 -07 000000547 INF: FPGA: Recv ZSGSRD 30080
17-03-17 23:00:15.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.738 -07 000000593 INF: FPGA: Recv ZSGSRD 30071
17-03-17 23:00:15.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.748 -07 000000429 INF: FPGA: Recv ZSGSRD 30074
17-03-17 23:00:15.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.758 -07 000000576 INF: FPGA: Recv ZSGSRD 30082
17-03-17 23:00:15.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.768 -07 000000541 INF: FPGA: Recv ZSGSRD 30080
17-03-17 23:00:15.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:15.778 -07 000000547 INF: FPGA: Recv ZSGSRD 30082
17-03-17 23:00:15.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.788 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:15.788 -07 000000415 INF: FPGA: Recv ZPIEZORD 25692
17-03-17 23:00:15.798 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.798 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.452 V. Piezo Error = -9.6 V.
17-03-17 23:00:15.798 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.6 um, Read 10 ADC samples: Avg = 30080 (-132.8 uncal um), Error = 0.8 uncal um, Median = 30081 (-132.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 30071 (-132.7 uncal um), Max = 30088 (-132.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 23:00:15.798 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30080, posNoise = 8, negNoise = 9
17-03-17 23:00:15.798 -07 000000610 INF: Z Motor: After move to -0.133550, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:15.798 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 111 ms (allowed 150 ms), total time = 1549 ms
17-03-17 23:00:15.798 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:15.838 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-17 23:00:15.838 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:15.838 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.133563653235305. ----------
17-03-17 23:00:15.838 -07 000000610 INF: Cycle	70	Tile	2	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:15.838 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28997, sync = True, waitForSettling = True)
17-03-17 23:00:15.838 -07 000000610 INF: Z Motor: Moving to -0.132740 mm, started at -0.133564 mm, distance = 0.82 um
17-03-17 23:00:15.838 -07 000000610 INF: FPGA: Xmit ZDACW 28997\n [Z Motor]
17-03-17 23:00:15.838 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 23:00:15.848 -07 000000610 INF: FPGA: 'ZDACW 28997' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:15.848 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:15.848 -07 000000502 INF: FPGA: Recv ZDACR 28997
17-03-17 23:00:15.858 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:15.858 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:16.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.008 -07 000000623 INF: FPGA: Recv ZSGSRD 29959
17-03-17 23:00:16.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:16.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.018 -07 000000547 INF: FPGA: Recv ZSGSRD 29954
17-03-17 23:00:16.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.028 -07 000000448 INF: FPGA: Recv ZSGSRD 29956
17-03-17 23:00:16.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.038 -07 000000541 INF: FPGA: Recv ZSGSRD 29953
17-03-17 23:00:16.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.048 -07 000000501 INF: FPGA: Recv ZSGSRD 29946
17-03-17 23:00:16.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.058 -07 000000593 INF: FPGA: Recv ZSGSRD 29954
17-03-17 23:00:16.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.068 -07 000000382 INF: FPGA: Recv ZSGSRD 29947
17-03-17 23:00:16.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.078 -07 000000409 INF: FPGA: Recv ZSGSRD 29954
17-03-17 23:00:16.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.088 -07 000000475 INF: FPGA: Recv ZSGSRD 29958
17-03-17 23:00:16.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:16.098 -07 000000502 INF: FPGA: Recv ZSGSRD 29953
17-03-17 23:00:16.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.108 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:16.108 -07 000000462 INF: FPGA: Recv ZPIEZORD 25530
17-03-17 23:00:16.118 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:16.118 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.425 V. Piezo Error = -9.7 V.
17-03-17 23:00:16.118 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29953 (-132.0 uncal um), Error = 0.8 uncal um, Median = 29954 (-132.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29946 (-131.9 uncal um), Max = 29959 (-132.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:16.118 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29953, posNoise = 6, negNoise = 7
17-03-17 23:00:16.118 -07 000000610 INF: Z Motor: After move to -0.132740, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:16.118 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 23:00:16.118 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:16.118 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:16.118 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:16.118 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:16.118 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:16.118 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:16.118 -07 000000627 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:16.118 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:16.118 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 23:00:16.118 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:16.128 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 23:00:16.128 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:16.128 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:16.128 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:16.128 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:00:16.128 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:16.138 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 23:00:16.138 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-17 23:00:16.138 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-17 23:00:16.138 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 23:00:16.138 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 29174 150\n [Camera]
17-03-17 23:00:16.338 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:16.808 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:16.808 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:16.808 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:16.808 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:16.808 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) start.
17-03-17 23:00:16.808 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:16.808 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:16.808 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:16.808 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:16.808 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) start.
17-03-17 23:00:16.998 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29174 849
17-03-17 23:00:17.028 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:17.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:17.148 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:17.208 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2719780968, 0x0, 391868352) end. Duration was 401 ms.
17-03-17 23:00:17.208 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 23:00:17.208 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:17.208 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2755203232, 0x0, 418435064) end. Duration was 400 ms.
17-03-17 23:00:17.208 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 23:00:17.208 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:17.208 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:17.208 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 23:00:17.208 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:17.218 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-17 23:00:17.368 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:17.368 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:17.368 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:17.368 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:17.368 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) start.
17-03-17 23:00:17.368 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:17.378 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:17.378 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:17.378 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:17.378 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) start.
17-03-17 23:00:17.558 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 23:00:17.558 -07 000000475 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:17.558 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 29174 150' command took 2 ms to send, 1419 ms to get response, and 1421 ms overall
17-03-17 23:00:17.568 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:00:17.568 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.732421875, Z-Position -0.132747778293301. ------
17-03-17 23:00:17.568 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:17.568 -07 000000429 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13943 mm
17-03-17 23:00:17.568 -07 000000429 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:17.578 -07 000000475 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:17.578 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:00:17.578 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 30457, sync = True, waitForSettling = False)
17-03-17 23:00:17.578 -07 000000576 INF: Z Motor: Moving to -0.139423 mm, started at -0.132748 mm, distance = -6.68 um
17-03-17 23:00:17.578 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:00:17.578 -07 000000623 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-17 23:00:17.578 -07 000000623 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-17 23:00:17.588 -07 000000576 INF: FPGA: Xmit ZDACW 30457\n [Z Motor]
17-03-17 23:00:17.588 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 23:00:17.598 -07 000000623 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:17.598 -07 000000576 INF: FPGA: 'ZDACW 30457' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:17.598 -07 000000547 INF: FPGA: Recv YRDPOS 124380
17-03-17 23:00:17.608 -07 000000623 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 23:00:17.608 -07 000000623 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:17.608 -07 000000623 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:17.608 -07 000000623 INF: Y Motor: Moving 1344 steps-21
17-03-17 23:00:17.608 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:17.608 -07 000000627 INF: FPGA: Recv ZDACR 30457
17-03-17 23:00:17.618 -07 000000576 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:17.618 -07 000000576 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-17 23:00:17.618 -07 000000623 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:17.768 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2818576432, 0x0, 391868352) end. Duration was 398 ms.
17-03-17 23:00:17.768 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 23:00:17.768 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:17.768 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2853998696, 0x0, 418435064) end. Duration was 398 ms.
17-03-17 23:00:17.768 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 23:00:17.768 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:17.778 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:17.778 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 23:00:17.778 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:17.778 -07 000000415 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:00:17.778 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 203 ms overall
17-03-17 23:00:17.788 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-17 23:00:17.988 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 23:00:17.988 -07 000000623 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 23:00:18.028 -07 000000623 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:18.038 -07 000000409 INF: FPGA: Recv YRDPOS 126081
17-03-17 23:00:18.038 -07 000000623 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-17 23:00:18.038 -07 000000623 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:18.038 -07 000000623 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 23:00:18.038 -07 000000623 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.840 mm, average velocity = 2.171 mm/sec
17-03-17 23:00:18.258 -07 000000409 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.007176,
17-03-17 23:00:18.988 -07 000000623 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:18.988 -07 000000502 INF: FPGA: Recv YRDPOS 126081
17-03-17 23:00:18.998 -07 000000623 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:18.998 -07 000000623 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:19.018 -07 000000623 INF: Y Motor: After move to 61.572609, error = -0.009621, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:19.018 -07 000000623 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:19.018 -07 000000623 INF: Y Motor: Moved to 61.5630 after 1445 ms (table move)
17-03-17 23:00:19.018 -07 000000429 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139423 mm (DAC = 30457)
17-03-17 23:00:19.028 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.028 -07 000000409 INF: FPGA: Recv ZSGSRD 30993
17-03-17 23:00:19.038 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:19.038 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.038 -07 000000475 INF: FPGA: Recv ZSGSRD 30994
17-03-17 23:00:19.048 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.048 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.048 -07 000000482 INF: FPGA: Recv ZSGSRD 30994
17-03-17 23:00:19.058 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.058 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.058 -07 000000547 INF: FPGA: Recv ZSGSRD 30998
17-03-17 23:00:19.068 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.068 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.068 -07 000000623 INF: FPGA: Recv ZSGSRD 30991
17-03-17 23:00:19.078 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.078 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.078 -07 000000576 INF: FPGA: Recv ZSGSRD 30991
17-03-17 23:00:19.088 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.088 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.088 -07 000000382 INF: FPGA: Recv ZSGSRD 30985
17-03-17 23:00:19.098 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.098 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.098 -07 000000482 INF: FPGA: Recv ZSGSRD 30991
17-03-17 23:00:19.108 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.108 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.108 -07 000000448 INF: FPGA: Recv ZSGSRD 30996
17-03-17 23:00:19.118 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.118 -07 000000429 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.118 -07 000000475 INF: FPGA: Recv ZSGSRD 30993
17-03-17 23:00:19.128 -07 000000429 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.128 -07 000000429 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:19.128 -07 000000501 INF: FPGA: Recv ZPIEZORD 26889
17-03-17 23:00:19.138 -07 000000429 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.138 -07 000000429 INF: Z Motor: Piezo is near 37.4 V (nominally 0 to 100 V), expect near 46.5 V, since DAC is at 4.647 V. Piezo Error = -9.0 V.
17-03-17 23:00:19.138 -07 000000429 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.4 um, Read 10 ADC samples: Avg = 30993 (-138.6 uncal um), Error = 0.8 uncal um, Median = 30993 (-138.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 30985 (-138.6 uncal um), Max = 30998 (-138.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-17 23:00:19.138 -07 000000429 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30993, posNoise = 5, negNoise = 8
17-03-17 23:00:19.138 -07 000000429 INF: Z Motor: After move to -0.139423, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:19.138 -07 000000429 INF: Z Motor: Settle wait time = 1449 ms, measure time = 110 ms (allowed 150 ms), total time = 1559 ms
17-03-17 23:00:19.138 -07 000000429 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:19.178 -07 000000429 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms
17-03-17 23:00:19.178 -07 000000429 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:19.178 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:19.178 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:19.178 -07 000000478 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:19.178 -07 000000593 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:19.178 -07 000000409 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:00:19.178 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:19.188 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:19.188 -07 000000409 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:00:19.188 -07 000000409 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:19.188 -07 000000409 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:00:19.198 -07 000000409 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-17 23:00:19.198 -07 000000409 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 13 ms.
17-03-17 23:00:19.198 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:00:19.248 -07 000000478 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:00:19.438 -07 000000623 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:00:19.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:00:19.448 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:00:19.448 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start.
17-03-17 23:00:19.478 -07 000000627 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:00:19.488 -07 000000429 INF: FPGA: Recv CAMSNAP
17-03-17 23:00:19.488 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 285 ms overall
17-03-17 23:00:19.578 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 23:00:19.578 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:19.578 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 23:00:19.578 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 23:00:19.588 -07 000000623 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:19.588 -07 000000593 INF: Autofocus start
17-03-17 23:00:19.588 -07 000000593 INF: MeasureProfile start
17-03-17 23:00:19.588 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:19.598 -07 000000623 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:00:19.598 -07 000000623 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:00:19.598 -07 000000593 INF: MeasureProfile done
17-03-17 23:00:19.598 -07 000000593 INF: X=16  Z correction [um]=0.0530179
17-03-17 23:00:19.598 -07 000000593 INF: Autofocus finished
17-03-17 23:00:19.798 -07 000000576 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:00:19.798 -07 000000623 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:00:19.798 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56298828125, Z-position -0.139428958920732. ----------
17-03-17 23:00:19.808 -07 000000610 INF: Cycle	70	Tile	3	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:19.808 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28982, sync = True, waitForSettling = True)
17-03-17 23:00:19.808 -07 000000610 INF: Z Motor: Moving to -0.132671 mm, started at -0.139429 mm, distance = 6.76 um
17-03-17 23:00:19.808 -07 000000610 INF: FPGA: Xmit ZDACW 28982\n [Z Motor]
17-03-17 23:00:19.808 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 23:00:19.818 -07 000000610 INF: FPGA: 'ZDACW 28982' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:19.818 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:19.818 -07 000000501 INF: FPGA: Recv ZDACR 28982
17-03-17 23:00:19.828 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.828 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:19.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.978 -07 000000541 INF: FPGA: Recv ZSGSRD 29942
17-03-17 23:00:19.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:19.988 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.988 -07 000000618 INF: FPGA: Recv ZSGSRD 29947
17-03-17 23:00:19.998 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:19.998 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:19.998 -07 000000478 INF: FPGA: Recv ZSGSRD 29940
17-03-17 23:00:20.008 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.008 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.008 -07 000000502 INF: FPGA: Recv ZSGSRD 29949
17-03-17 23:00:20.018 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.018 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.018 -07 000000547 INF: FPGA: Recv ZSGSRD 29944
17-03-17 23:00:20.028 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.028 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.028 -07 000000502 INF: FPGA: Recv ZSGSRD 29942
17-03-17 23:00:20.038 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.038 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.038 -07 000000623 INF: FPGA: Recv ZSGSRD 29943
17-03-17 23:00:20.048 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.048 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.048 -07 000000462 INF: FPGA: Recv ZSGSRD 29945
17-03-17 23:00:20.058 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.058 -07 000000593 INF: FPGA: Recv ZSGSRD 29942
17-03-17 23:00:20.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:20.068 -07 000000501 INF: FPGA: Recv ZSGSRD 29936
17-03-17 23:00:20.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.078 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:20.078 -07 000000409 INF: FPGA: Recv ZPIEZORD 25570
17-03-17 23:00:20.088 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:20.088 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.422 V. Piezo Error = -9.6 V.
17-03-17 23:00:20.088 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29943 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29942 (-131.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29936 (-131.9 uncal um), Max = 29949 (-131.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:20.088 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29943, posNoise = 6, negNoise = 7
17-03-17 23:00:20.088 -07 000000610 INF: Z Motor: After move to -0.132671, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:20.088 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-17 23:00:20.088 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:20.088 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:20.088 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:20.088 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:20.088 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:20.088 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:20.088 -07 000000551 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:20.088 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:20.088 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 23:00:20.088 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:20.088 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:00:20.088 -07 000000551 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:20.088 -07 000000551 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:20.088 -07 000000551 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:20.088 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:20.088 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:20.098 -07 000000551 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 23:00:20.098 -07 000000551 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 23:00:20.098 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 23:00:20.098 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 23:00:20.108 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 29158 150\n [Camera]
17-03-17 23:00:20.308 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:20.768 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:20.768 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:20.768 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:20.768 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:20.768 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) start.
17-03-17 23:00:20.768 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:20.768 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:20.778 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:20.778 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:20.778 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-17 23:00:20.958 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29158 849
17-03-17 23:00:21.108 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:21.148 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 23:00:21.148 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 23:00:21.148 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:21.148 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:21.148 -07 000000486 INF: Camera: sBCa_ReadImage(785074288, 2889420960, 0x0, 391868352) end. Duration was 380 ms.
17-03-17 23:00:21.148 -07 000000486 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 23:00:21.148 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:21.158 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:21.158 -07 000000486 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 23:00:21.158 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 23:00:21.338 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:21.338 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:21.338 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:21.338 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:21.338 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start.
17-03-17 23:00:21.338 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:21.338 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:21.338 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:21.338 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:21.338 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) start.
17-03-17 23:00:21.528 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:21.528 -07 000000382 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:21.528 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 29158 150' command took 2 ms to send, 1414 ms to get response, and 1421 ms overall
17-03-17 23:00:21.528 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.133093
17-03-17 23:00:21.528 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13309 mm
17-03-17 23:00:21.528 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:21.688 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-17 23:00:21.688 -07 000000475 INF: Y Motor: Moving to 62.4026 mm, started at 61.5630 mm, delta = 0.8396 mm
17-03-17 23:00:21.688 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:21.688 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 29074, sync = True, waitForSettling = False)
17-03-17 23:00:21.688 -07 000000618 INF: Z Motor: Moving to -0.133092 mm, started at -0.132684 mm, distance = -0.41 um
17-03-17 23:00:21.688 -07 000000576 INF: FPGA: Recv YRDPOS 126082
17-03-17 23:00:21.698 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:21.698 -07 000000475 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:21.698 -07 000000618 INF: FPGA: Xmit ZDACW 29074\n [Z Motor]
17-03-17 23:00:21.698 -07 000000462 INF: FPGA: Recv ZDACW
17-03-17 23:00:21.698 -07 000000475 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:21.698 -07 000000475 INF: Y Motor: Moving 1343 steps-20
17-03-17 23:00:21.708 -07 000000618 INF: FPGA: 'ZDACW 29074' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 23:00:21.708 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:21.718 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:21.718 -07 000000448 INF: FPGA: Recv ZDACR 29074
17-03-17 23:00:21.728 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:21.728 -07 000000618 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-17 23:00:21.758 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) end. Duration was 413 ms.
17-03-17 23:00:21.758 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-17 23:00:21.758 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:21.758 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 416 ms.
17-03-17 23:00:21.758 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 417 ms.
17-03-17 23:00:21.758 -07 000000551 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:21.758 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:21.768 -07 000000551 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 23:00:21.768 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 424 ms.
17-03-17 23:00:21.768 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 424 ms.
17-03-17 23:00:22.028 -07 000000482 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:22.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:22.078 -07 000000576 INF: FPGA: Recv YMVTILE
17-03-17 23:00:22.078 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-17 23:00:22.118 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:22.128 -07 000000623 INF: FPGA: Recv YRDPOS 127785
17-03-17 23:00:22.128 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 23:00:22.128 -07 000000475 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:22.128 -07 000000475 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 23:00:22.128 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.840 mm, average velocity = 2.181 mm/sec
17-03-17 23:00:23.078 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:23.078 -07 000000415 INF: FPGA: Recv YRDPOS 127785
17-03-17 23:00:23.088 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:23.088 -07 000000475 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:23.108 -07 000000475 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:23.108 -07 000000475 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:23.108 -07 000000475 INF: Y Motor: Moved to 62.3950 after 1422 ms (table move)
17-03-17 23:00:23.108 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133092 mm (DAC = 29074)
17-03-17 23:00:23.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.118 -07 000000409 INF: FPGA: Recv ZSGSRD 30009
17-03-17 23:00:23.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:23.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.118 -07 000000482 INF: FPGA: Recv ZSGSRD 30004
17-03-17 23:00:23.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:23.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.128 -07 000000547 INF: FPGA: Recv ZSGSRD 30011
17-03-17 23:00:23.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.138 -07 000000502 INF: FPGA: Recv ZSGSRD 30000
17-03-17 23:00:23.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.148 -07 000000486 INF: FPGA: Recv ZSGSRD 30011
17-03-17 23:00:23.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.158 -07 000000409 INF: FPGA: Recv ZSGSRD 30012
17-03-17 23:00:23.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.168 -07 000000501 INF: FPGA: Recv ZSGSRD 29997
17-03-17 23:00:23.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.178 -07 000000547 INF: FPGA: Recv ZSGSRD 30003
17-03-17 23:00:23.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.188 -07 000000541 INF: FPGA: Recv ZSGSRD 30004
17-03-17 23:00:23.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.198 -07 000000486 INF: FPGA: Recv ZSGSRD 30009
17-03-17 23:00:23.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.208 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:23.208 -07 000000576 INF: FPGA: Recv ZPIEZORD 25697
17-03-17 23:00:23.218 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.218 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.436 V. Piezo Error = -9.5 V.
17-03-17 23:00:23.218 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30006 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30006 (-132.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29997 (-132.2 uncal um), Max = 30012 (-132.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 23:00:23.218 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30006, posNoise = 6, negNoise = 9
17-03-17 23:00:23.218 -07 000000610 INF: Z Motor: After move to -0.133092, error = 0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:23.218 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 103 ms (allowed 150 ms), total time = 1527 ms
17-03-17 23:00:23.218 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:23.268 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1733 ms
17-03-17 23:00:23.268 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:23.268 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.133088261536814. ----------
17-03-17 23:00:23.268 -07 000000610 INF: Cycle	70	Tile	4	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:23.268 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28898, sync = True, waitForSettling = True)
17-03-17 23:00:23.268 -07 000000610 INF: Z Motor: Moving to -0.132287 mm, started at -0.133088 mm, distance = 0.80 um
17-03-17 23:00:23.268 -07 000000610 INF: FPGA: Xmit ZDACW 28898\n [Z Motor]
17-03-17 23:00:23.268 -07 000000429 INF: FPGA: Recv ZDACW
17-03-17 23:00:23.278 -07 000000610 INF: FPGA: 'ZDACW 28898' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:23.278 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:23.278 -07 000000627 INF: FPGA: Recv ZDACR 28898
17-03-17 23:00:23.288 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.288 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:23.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.438 -07 000000502 INF: FPGA: Recv ZSGSRD 29882
17-03-17 23:00:23.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.448 -07 000000462 INF: FPGA: Recv ZSGSRD 29884
17-03-17 23:00:23.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.458 -07 000000618 INF: FPGA: Recv ZSGSRD 29878
17-03-17 23:00:23.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.468 -07 000000547 INF: FPGA: Recv ZSGSRD 29888
17-03-17 23:00:23.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.478 -07 000000478 INF: FPGA: Recv ZSGSRD 29875
17-03-17 23:00:23.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.488 -07 000000576 INF: FPGA: Recv ZSGSRD 29881
17-03-17 23:00:23.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.498 -07 000000501 INF: FPGA: Recv ZSGSRD 29883
17-03-17 23:00:23.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.508 -07 000000618 INF: FPGA: Recv ZSGSRD 29883
17-03-17 23:00:23.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.518 -07 000000547 INF: FPGA: Recv ZSGSRD 29886
17-03-17 23:00:23.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:23.528 -07 000000429 INF: FPGA: Recv ZSGSRD 29883
17-03-17 23:00:23.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.538 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:23.538 -07 000000475 INF: FPGA: Recv ZPIEZORD 25503
17-03-17 23:00:23.548 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:23.548 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.410 V. Piezo Error = -9.6 V.
17-03-17 23:00:23.548 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29882 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29883 (-131.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29875 (-131.5 uncal um), Max = 29888 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:23.548 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29882, posNoise = 6, negNoise = 7
17-03-17 23:00:23.548 -07 000000610 INF: Z Motor: After move to -0.132287, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:23.548 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 23:00:23.548 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:23.548 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:23.548 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:23.548 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:23.548 -07 000000478 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:23.548 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:23.548 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:23.548 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:23.548 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:23.548 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:23.548 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:23.548 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:23.558 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:00:23.558 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:23.558 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:23.558 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:23.558 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 23:00:23.558 -07 000000478 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 23:00:23.568 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 23:00:23.568 -07 000000429 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 23:00:23.568 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 29074 150\n [Camera]
17-03-17 23:00:23.618 -07 000000415 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.983999,
17-03-17 23:00:23.768 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:24.228 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:24.228 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:24.238 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:24.238 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:24.238 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:24.238 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:24.248 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:24.248 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 23:00:24.248 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:24.248 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 23:00:24.428 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29074 849
17-03-17 23:00:24.568 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:24.618 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 368 ms.
17-03-17 23:00:24.618 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-17 23:00:24.618 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:24.618 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 374 ms.
17-03-17 23:00:24.618 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 23:00:24.618 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:24.618 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:24.628 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:24.628 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 23:00:24.628 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 23:00:24.798 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:24.798 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:24.798 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:24.808 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:24.808 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:24.808 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:24.808 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 23:00:24.808 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:24.818 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:24.818 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start.
17-03-17 23:00:24.988 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:24.988 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:24.988 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 29074 150' command took 2 ms to send, 1415 ms to get response, and 1422 ms overall
17-03-17 23:00:24.988 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.133040
17-03-17 23:00:24.988 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13304 mm
17-03-17 23:00:24.988 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:24.998 -07 000000627 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-17 23:00:24.998 -07 000000627 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-17 23:00:24.998 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:24.998 -07 000000429 INF: Z Motor: Entering MoveAbsStepped (DAC = 29063, sync = True, waitForSettling = False)
17-03-17 23:00:24.998 -07 000000429 INF: Z Motor: Moving to -0.133042 mm, started at -0.132292 mm, distance = -0.75 um
17-03-17 23:00:24.998 -07 000000415 INF: FPGA: Recv YRDPOS 127785
17-03-17 23:00:25.008 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:25.008 -07 000000627 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:25.008 -07 000000627 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:25.008 -07 000000627 INF: Y Motor: Moving 1340 steps-16
17-03-17 23:00:25.008 -07 000000429 INF: FPGA: Xmit ZDACW 29063\n [Z Motor]
17-03-17 23:00:25.008 -07 000000551 INF: FPGA: Recv ZDACW
17-03-17 23:00:25.018 -07 000000429 INF: FPGA: 'ZDACW 29063' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:25.018 -07 000000429 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:25.018 -07 000000576 INF: FPGA: Recv ZDACR 29063
17-03-17 23:00:25.028 -07 000000627 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:25.028 -07 000000429 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:25.028 -07 000000429 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-17 23:00:25.208 -07 000000593 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 23:00:25.208 -07 000000593 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-17 23:00:25.208 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:25.208 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 395 ms.
17-03-17 23:00:25.208 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:25.208 -07 000000593 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-17 23:00:25.208 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 23:00:25.208 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:25.218 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:25.218 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-17 23:00:25.398 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 23:00:25.398 -07 000000627 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:00:25.438 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:25.448 -07 000000478 INF: FPGA: Recv YRDPOS 129482
17-03-17 23:00:25.448 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 23:00:25.448 -07 000000627 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:25.448 -07 000000627 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-17 23:00:25.448 -07 000000627 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.104 mm/sec
17-03-17 23:00:26.398 -07 000000627 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:26.398 -07 000000415 INF: FPGA: Recv YRDPOS 129482
17-03-17 23:00:26.408 -07 000000627 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:26.408 -07 000000627 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:26.428 -07 000000627 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:26.428 -07 000000627 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:26.428 -07 000000627 INF: Y Motor: Moved to 63.2236 after 1436 ms (table move)
17-03-17 23:00:26.428 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133042 mm (DAC = 29063)
17-03-17 23:00:26.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.438 -07 000000462 INF: FPGA: Recv ZSGSRD 30008
17-03-17 23:00:26.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 23:00:26.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.438 -07 000000486 INF: FPGA: Recv ZSGSRD 30000
17-03-17 23:00:26.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:26.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.448 -07 000000429 INF: FPGA: Recv ZSGSRD 29996
17-03-17 23:00:26.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.458 -07 000000448 INF: FPGA: Recv ZSGSRD 30004
17-03-17 23:00:26.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.468 -07 000000551 INF: FPGA: Recv ZSGSRD 29997
17-03-17 23:00:26.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.478 -07 000000462 INF: FPGA: Recv ZSGSRD 30006
17-03-17 23:00:26.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.488 -07 000000502 INF: FPGA: Recv ZSGSRD 30001
17-03-17 23:00:26.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.498 -07 000000409 INF: FPGA: Recv ZSGSRD 29995
17-03-17 23:00:26.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.508 -07 000000593 INF: FPGA: Recv ZSGSRD 29996
17-03-17 23:00:26.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.518 -07 000000475 INF: FPGA: Recv ZSGSRD 29995
17-03-17 23:00:26.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.528 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:26.528 -07 000000482 INF: FPGA: Recv ZPIEZORD 25684
17-03-17 23:00:26.538 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.538 -07 000000610 INF: Z Motor: Piezo is near 34.9 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.435 V. Piezo Error = -9.5 V.
17-03-17 23:00:26.538 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.0 um, Read 10 ADC samples: Avg = 30000 (-132.3 uncal um), Error = 0.8 uncal um, Median = 29998 (-132.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29995 (-132.2 uncal um), Max = 30008 (-132.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:00:26.538 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30000, posNoise = 8, negNoise = 5
17-03-17 23:00:26.538 -07 000000610 INF: Z Motor: After move to -0.133042, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:26.538 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 103 ms (allowed 150 ms), total time = 1540 ms
17-03-17 23:00:26.538 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:26.588 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-17 23:00:26.588 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:26.588 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.133049716263964. ----------
17-03-17 23:00:26.588 -07 000000610 INF: Cycle	70	Tile	5	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:26.588 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28886, sync = True, waitForSettling = True)
17-03-17 23:00:26.588 -07 000000610 INF: Z Motor: Moving to -0.132232 mm, started at -0.133050 mm, distance = 0.82 um
17-03-17 23:00:26.588 -07 000000610 INF: FPGA: Xmit ZDACW 28886\n [Z Motor]
17-03-17 23:00:26.588 -07 000000502 INF: FPGA: Recv ZDACW
17-03-17 23:00:26.598 -07 000000610 INF: FPGA: 'ZDACW 28886' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:26.598 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:26.598 -07 000000576 INF: FPGA: Recv ZDACR 28886
17-03-17 23:00:26.608 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.608 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:26.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.758 -07 000000415 INF: FPGA: Recv ZSGSRD 29875
17-03-17 23:00:26.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:26.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.768 -07 000000547 INF: FPGA: Recv ZSGSRD 29877
17-03-17 23:00:26.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.778 -07 000000448 INF: FPGA: Recv ZSGSRD 29879
17-03-17 23:00:26.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.788 -07 000000501 INF: FPGA: Recv ZSGSRD 29881
17-03-17 23:00:26.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.798 -07 000000409 INF: FPGA: Recv ZSGSRD 29871
17-03-17 23:00:26.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.808 -07 000000415 INF: FPGA: Recv ZSGSRD 29869
17-03-17 23:00:26.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.818 -07 000000576 INF: FPGA: Recv ZSGSRD 29872
17-03-17 23:00:26.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.828 -07 000000541 INF: FPGA: Recv ZSGSRD 29873
17-03-17 23:00:26.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.838 -07 000000502 INF: FPGA: Recv ZSGSRD 29877
17-03-17 23:00:26.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:26.848 -07 000000618 INF: FPGA: Recv ZSGSRD 29878
17-03-17 23:00:26.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.858 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:26.858 -07 000000501 INF: FPGA: Recv ZPIEZORD 25542
17-03-17 23:00:26.868 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:26.868 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.408 V. Piezo Error = -9.5 V.
17-03-17 23:00:26.868 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29875 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29876 (-131.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29869 (-131.4 uncal um), Max = 29881 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 23:00:26.868 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29875, posNoise = 6, negNoise = 6
17-03-17 23:00:26.868 -07 000000610 INF: Z Motor: After move to -0.132232, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:26.868 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 23:00:26.868 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:26.868 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:26.868 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:26.868 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:26.868 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:26.868 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:26.868 -07 000000623 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:26.868 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:26.868 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:26.868 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:26.868 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:26.868 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:26.868 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:00:26.868 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:26.878 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 23:00:26.878 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:26.888 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 23:00:26.888 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 23:00:26.888 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 23:00:26.888 -07 000000623 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-17 23:00:26.898 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 29063 150\n [Camera]
17-03-17 23:00:27.028 -07 000000551 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:27.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:27.098 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:27.558 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:27.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:27.558 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:27.558 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:27.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:27.558 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:27.558 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:27.558 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 23:00:27.568 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:27.568 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 23:00:27.748 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29063 849
17-03-17 23:00:27.898 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:27.938 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 23:00:27.938 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 23:00:27.938 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:27.938 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:27.938 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 23:00:27.938 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-17 23:00:27.938 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:27.948 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:27.948 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 23:00:27.948 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 23:00:28.128 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:28.128 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:28.128 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:28.128 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:28.128 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:28.128 -07 000000478 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:28.128 -07 000000478 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:28.128 -07 000000478 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 23:00:28.128 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:28.128 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 23:00:28.318 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:28.318 -07 000000486 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:28.318 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 29063 150' command took 2 ms to send, 1412 ms to get response, and 1421 ms overall
17-03-17 23:00:28.318 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132693
17-03-17 23:00:28.318 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13269 mm
17-03-17 23:00:28.318 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:28.318 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-17 23:00:28.318 -07 000000501 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-17 23:00:28.318 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:28.318 -07 000000623 INF: Z Motor: Entering MoveAbsStepped (DAC = 28987, sync = True, waitForSettling = False)
17-03-17 23:00:28.318 -07 000000623 INF: Z Motor: Moving to -0.132694 mm, started at -0.132247 mm, distance = -0.45 um
17-03-17 23:00:28.328 -07 000000551 INF: FPGA: Recv YRDPOS 129482
17-03-17 23:00:28.328 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:28.328 -07 000000501 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:28.328 -07 000000501 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:28.328 -07 000000501 INF: Y Motor: Moving 1342 steps-18
17-03-17 23:00:28.328 -07 000000623 INF: FPGA: Xmit ZDACW 28987\n [Z Motor]
17-03-17 23:00:28.328 -07 000000576 INF: FPGA: Recv ZDACW
17-03-17 23:00:28.338 -07 000000623 INF: FPGA: 'ZDACW 28987' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 23:00:28.338 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:28.348 -07 000000623 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:28.348 -07 000000486 INF: FPGA: Recv ZDACR 28987
17-03-17 23:00:28.358 -07 000000623 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:28.358 -07 000000623 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-17 23:00:28.508 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 375 ms.
17-03-17 23:00:28.508 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-17 23:00:28.508 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:28.508 -07 000000478 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 23:00:28.508 -07 000000478 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 23:00:28.508 -07 000000478 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:28.508 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:28.508 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:28.508 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-17 23:00:28.518 -07 000000478 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 23:00:28.718 -07 000000409 INF: FPGA: Recv YMVTILE
17-03-17 23:00:28.718 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 390 ms overall
17-03-17 23:00:28.758 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:28.758 -07 000000475 INF: FPGA: Recv YRDPOS 131188
17-03-17 23:00:28.768 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:00:28.768 -07 000000501 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:28.768 -07 000000501 INF: Y Motor: Position error before settling (table move) = -12 encoder counts (-0.006 mm)
17-03-17 23:00:28.768 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.839 mm, average velocity = 2.151 mm/sec
17-03-17 23:00:28.978 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.98264,
17-03-17 23:00:29.718 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:29.718 -07 000000482 INF: FPGA: Recv YRDPOS 131188
17-03-17 23:00:29.728 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:29.728 -07 000000501 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:29.748 -07 000000501 INF: Y Motor: After move to 64.062607, error = -0.005966, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:29.748 -07 000000501 INF: Y Motor: Position error after settling (table move) = -12 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:29.748 -07 000000501 INF: Y Motor: Moved to 64.0566 after 1429 ms (table move)
17-03-17 23:00:29.748 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132694 mm (DAC = 28987)
17-03-17 23:00:29.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.758 -07 000000576 INF: FPGA: Recv ZSGSRD 29945
17-03-17 23:00:29.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 23:00:29.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.758 -07 000000478 INF: FPGA: Recv ZSGSRD 29949
17-03-17 23:00:29.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:29.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.768 -07 000000409 INF: FPGA: Recv ZSGSRD 29935
17-03-17 23:00:29.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.778 -07 000000482 INF: FPGA: Recv ZSGSRD 29938
17-03-17 23:00:29.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.788 -07 000000462 INF: FPGA: Recv ZSGSRD 29950
17-03-17 23:00:29.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.798 -07 000000576 INF: FPGA: Recv ZSGSRD 29950
17-03-17 23:00:29.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.808 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.808 -07 000000541 INF: FPGA: Recv ZSGSRD 29953
17-03-17 23:00:29.818 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.818 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.818 -07 000000618 INF: FPGA: Recv ZSGSRD 29945
17-03-17 23:00:29.828 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.828 -07 000000593 INF: FPGA: Recv ZSGSRD 29941
17-03-17 23:00:29.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:29.838 -07 000000623 INF: FPGA: Recv ZSGSRD 29942
17-03-17 23:00:29.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.848 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:29.848 -07 000000627 INF: FPGA: Recv ZPIEZORD 25648
17-03-17 23:00:29.858 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.858 -07 000000610 INF: Z Motor: Piezo is near 34.8 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -9.4 V.
17-03-17 23:00:29.858 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29945 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29945 (-131.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29935 (-131.8 uncal um), Max = 29953 (-132.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 23:00:29.858 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29945, posNoise = 8, negNoise = 10
17-03-17 23:00:29.858 -07 000000610 INF: Z Motor: After move to -0.132694, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:29.858 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 101 ms (allowed 150 ms), total time = 1532 ms
17-03-17 23:00:29.858 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:29.908 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 23:00:29.908 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:29.908 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.056640625, Z-position -0.132696384596167. ----------
17-03-17 23:00:29.908 -07 000000610 INF: Cycle	70	Tile	6	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:29.908 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28810, sync = True, waitForSettling = True)
17-03-17 23:00:29.908 -07 000000610 INF: Z Motor: Moving to -0.131884 mm, started at -0.132696 mm, distance = 0.81 um
17-03-17 23:00:29.908 -07 000000610 INF: FPGA: Xmit ZDACW 28810\n [Z Motor]
17-03-17 23:00:29.908 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 23:00:29.918 -07 000000610 INF: FPGA: 'ZDACW 28810' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 23:00:29.918 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:29.918 -07 000000618 INF: FPGA: Recv ZDACR 28810
17-03-17 23:00:29.928 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:29.928 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:30.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.078 -07 000000576 INF: FPGA: Recv ZSGSRD 29815
17-03-17 23:00:30.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:30.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.088 -07 000000623 INF: FPGA: Recv ZSGSRD 29820
17-03-17 23:00:30.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.098 -07 000000415 INF: FPGA: Recv ZSGSRD 29818
17-03-17 23:00:30.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.108 -07 000000429 INF: FPGA: Recv ZSGSRD 29819
17-03-17 23:00:30.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.118 -07 000000501 INF: FPGA: Recv ZSGSRD 29822
17-03-17 23:00:30.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.128 -07 000000482 INF: FPGA: Recv ZSGSRD 29827
17-03-17 23:00:30.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.138 -07 000000551 INF: FPGA: Recv ZSGSRD 29817
17-03-17 23:00:30.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.148 -07 000000462 INF: FPGA: Recv ZSGSRD 29818
17-03-17 23:00:30.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.158 -07 000000382 INF: FPGA: Recv ZSGSRD 29814
17-03-17 23:00:30.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:30.168 -07 000000486 INF: FPGA: Recv ZSGSRD 29815
17-03-17 23:00:30.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.178 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:30.178 -07 000000576 INF: FPGA: Recv ZPIEZORD 25460
17-03-17 23:00:30.188 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:30.188 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -9.6 V.
17-03-17 23:00:30.188 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29818 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29818 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29814 (-131.1 uncal um), Max = 29827 (-131.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 23:00:30.188 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29818, posNoise = 9, negNoise = 4
17-03-17 23:00:30.188 -07 000000610 INF: Z Motor: After move to -0.131884, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:30.188 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 23:00:30.188 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:30.188 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:30.188 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:30.188 -07 000000475 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:30.188 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:30.188 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:30.188 -07 000000486 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:30.188 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:30.188 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:30.188 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:30.188 -07 000000486 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:30.188 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:30.198 -07 000000409 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:00:30.198 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:30.198 -07 000000486 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 23:00:30.198 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:30.208 -07 000000409 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 23:00:30.208 -07 000000409 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 23:00:30.208 -07 000000486 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 23:00:30.208 -07 000000486 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 23:00:30.208 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28987 150\n [Camera]
17-03-17 23:00:30.408 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:30.878 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:30.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:30.878 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:30.878 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:30.878 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 23:00:30.878 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:30.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:30.878 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:30.998 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:30.998 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 23:00:31.068 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28987 849
17-03-17 23:00:31.218 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:31.258 -07 000000478 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 23:00:31.258 -07 000000478 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 23:00:31.258 -07 000000478 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:31.268 -07 000000478 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:31.268 -07 000000478 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 23:00:31.368 -07 000000623 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 23:00:31.368 -07 000000623 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 23:00:31.368 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:31.368 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 23:00:31.378 -07 000000623 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 498 ms.
17-03-17 23:00:31.438 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:31.438 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:31.448 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:31.448 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:31.448 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:31.448 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:31.448 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:31.448 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 23:00:31.448 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:31.448 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 23:00:31.638 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP 1417
17-03-17 23:00:31.638 -07 000000409 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:31.638 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28987 150' command took 2 ms to send, 1416 ms to get response, and 1427 ms overall
17-03-17 23:00:31.638 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:00:31.638 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.056640625, Z-Position -0.131880509654163. ------
17-03-17 23:00:31.648 -07 000000415 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13848 mm
17-03-17 23:00:31.648 -07 000000415 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:31.648 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:31.648 -07 000000486 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:31.648 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-17 23:00:31.648 -07 000000502 INF: Y Motor: Moving to 64.8926 mm, started at 64.0566 mm, delta = 0.8360 mm
17-03-17 23:00:31.648 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 30250, sync = True, waitForSettling = False)
17-03-17 23:00:31.648 -07 000000501 INF: Z Motor: Moving to -0.138476 mm, started at -0.131881 mm, distance = -6.60 um
17-03-17 23:00:31.658 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:31.658 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:31.658 -07 000000409 INF: FPGA: Recv YRDPOS 131188
17-03-17 23:00:31.668 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-17 23:00:31.668 -07 000000502 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:31.668 -07 000000502 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:31.668 -07 000000502 INF: Y Motor: Moving 1338 steps-12
17-03-17 23:00:31.668 -07 000000501 INF: FPGA: Xmit ZDACW 30250\n [Z Motor]
17-03-17 23:00:31.668 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 23:00:31.678 -07 000000475 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:00:31.678 -07 000000501 INF: FPGA: 'ZDACW 30250' command took 1 ms to send, 0 ms to get response, and 22 ms overall
17-03-17 23:00:31.688 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:31.698 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:31.698 -07 000000593 INF: FPGA: Recv ZDACR 30250
17-03-17 23:00:31.708 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:00:31.708 -07 000000501 INF: Z Motor: MoveAbsStepped took 52 ms (did NOT wait for settling yet))
17-03-17 23:00:31.828 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 23:00:31.828 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 23:00:31.828 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:31.828 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 373 ms.
17-03-17 23:00:31.828 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-17 23:00:31.828 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:31.828 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:31.828 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 23:00:31.828 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:31.838 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 23:00:31.878 -07 000000478 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:00:31.878 -07 000000475 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 23:00:32.028 -07 000000551 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:32.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:32.058 -07 000000382 INF: FPGA: Recv YMVTILE
17-03-17 23:00:32.058 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:00:32.108 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:32.108 -07 000000478 INF: FPGA: Recv YRDPOS 132870
17-03-17 23:00:32.118 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:32.118 -07 000000502 INF: Y Motor: Encoder = 132870 = motor step 103804.7 = 64.8779 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:32.118 -07 000000502 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 23:00:32.118 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.836 mm, average velocity = 2.106 mm/sec
17-03-17 23:00:33.068 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:33.068 -07 000000486 INF: FPGA: Recv YRDPOS 132871
17-03-17 23:00:33.078 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:33.078 -07 000000502 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:33.098 -07 000000502 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:33.098 -07 000000502 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 23:00:33.098 -07 000000502 INF: Y Motor: Moved to 64.8784 after 1448 ms (table move)
17-03-17 23:00:33.098 -07 000000415 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138476 mm (DAC = 30250)
17-03-17 23:00:33.098 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.108 -07 000000551 INF: FPGA: Recv ZSGSRD 30850
17-03-17 23:00:33.108 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 23:00:33.108 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.108 -07 000000593 INF: FPGA: Recv ZSGSRD 30843
17-03-17 23:00:33.118 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:33.118 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.118 -07 000000448 INF: FPGA: Recv ZSGSRD 30846
17-03-17 23:00:33.128 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.128 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.128 -07 000000541 INF: FPGA: Recv ZSGSRD 30848
17-03-17 23:00:33.138 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.138 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.138 -07 000000547 INF: FPGA: Recv ZSGSRD 30853
17-03-17 23:00:33.148 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.148 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.148 -07 000000551 INF: FPGA: Recv ZSGSRD 30845
17-03-17 23:00:33.158 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.158 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.158 -07 000000486 INF: FPGA: Recv ZSGSRD 30845
17-03-17 23:00:33.168 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.168 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.168 -07 000000482 INF: FPGA: Recv ZSGSRD 30839
17-03-17 23:00:33.178 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.178 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.178 -07 000000618 INF: FPGA: Recv ZSGSRD 30846
17-03-17 23:00:33.188 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.188 -07 000000415 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:33.188 -07 000000478 INF: FPGA: Recv ZSGSRD 30847
17-03-17 23:00:33.198 -07 000000415 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.198 -07 000000415 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:33.198 -07 000000593 INF: FPGA: Recv ZPIEZORD 26801
17-03-17 23:00:33.208 -07 000000415 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.208 -07 000000415 INF: Z Motor: Piezo is near 37.3 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.616 V. Piezo Error = -8.9 V.
17-03-17 23:00:33.208 -07 000000415 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.5 um, Read 10 ADC samples: Avg = 30846 (-137.7 uncal um), Error = 0.8 uncal um, Median = 30846 (-137.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30839 (-137.6 uncal um), Max = 30853 (-137.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:33.208 -07 000000415 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30846, posNoise = 7, negNoise = 7
17-03-17 23:00:33.208 -07 000000415 INF: Z Motor: After move to -0.138476, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:33.208 -07 000000415 INF: Z Motor: Settle wait time = 1451 ms, measure time = 102 ms (allowed 150 ms), total time = 1553 ms
17-03-17 23:00:33.208 -07 000000415 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:33.258 -07 000000415 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-17 23:00:33.258 -07 000000415 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:33.258 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:33.258 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:33.258 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:33.258 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:33.258 -07 000000448 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:00:33.258 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:33.258 -07 000000448 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:33.258 -07 000000448 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:00:33.268 -07 000000448 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:33.268 -07 000000448 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:00:33.278 -07 000000448 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 23:00:33.278 -07 000000448 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 23:00:33.278 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:00:33.318 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:00:33.518 -07 000000486 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:00:33.518 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:00:33.528 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:00:33.528 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-17 23:00:33.558 -07 000000627 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:00:33.558 -07 000000502 INF: FPGA: Recv CAMSNAP
17-03-17 23:00:33.558 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 285 ms overall
17-03-17 23:00:33.648 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 23:00:33.648 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:33.658 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:00:33.658 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 23:00:33.668 -07 000000486 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:33.668 -07 000000576 INF: Autofocus start
17-03-17 23:00:33.668 -07 000000576 INF: MeasureProfile start
17-03-17 23:00:33.668 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:33.678 -07 000000486 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:00:33.678 -07 000000486 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:00:33.678 -07 000000576 INF: MeasureProfile done
17-03-17 23:00:33.678 -07 000000576 INF: X=-82  Z correction [um]=-0.4025642
17-03-17 23:00:33.678 -07 000000576 INF: Autofocus finished
17-03-17 23:00:33.878 -07 000000547 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:00:33.878 -07 000000486 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-17 23:00:33.888 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.138484599735893. ----------
17-03-17 23:00:33.888 -07 000000610 INF: Cycle	70	Tile	7	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:33.888 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28675, sync = True, waitForSettling = True)
17-03-17 23:00:33.898 -07 000000610 INF: Z Motor: Moving to -0.131266 mm, started at -0.138485 mm, distance = 7.22 um
17-03-17 23:00:33.898 -07 000000610 INF: FPGA: Xmit ZDACW 28675\n [Z Motor]
17-03-17 23:00:33.898 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 23:00:33.908 -07 000000610 INF: FPGA: 'ZDACW 28675' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.908 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:33.908 -07 000000448 INF: FPGA: Recv ZDACR 28675
17-03-17 23:00:33.918 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:33.918 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:34.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.068 -07 000000501 INF: FPGA: Recv ZSGSRD 29725
17-03-17 23:00:34.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:34.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.078 -07 000000429 INF: FPGA: Recv ZSGSRD 29726
17-03-17 23:00:34.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.088 -07 000000618 INF: FPGA: Recv ZSGSRD 29721
17-03-17 23:00:34.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.098 -07 000000627 INF: FPGA: Recv ZSGSRD 29721
17-03-17 23:00:34.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.108 -07 000000593 INF: FPGA: Recv ZSGSRD 29722
17-03-17 23:00:34.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.118 -07 000000541 INF: FPGA: Recv ZSGSRD 29725
17-03-17 23:00:34.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.128 -07 000000551 INF: FPGA: Recv ZSGSRD 29725
17-03-17 23:00:34.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.138 -07 000000502 INF: FPGA: Recv ZSGSRD 29723
17-03-17 23:00:34.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.148 -07 000000547 INF: FPGA: Recv ZSGSRD 29732
17-03-17 23:00:34.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:34.158 -07 000000482 INF: FPGA: Recv ZSGSRD 29729
17-03-17 23:00:34.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.168 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:34.168 -07 000000501 INF: FPGA: Recv ZPIEZORD 25333
17-03-17 23:00:34.178 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:34.178 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.376 V. Piezo Error = -9.6 V.
17-03-17 23:00:34.178 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29725 (-130.5 uncal um), Error = 0.8 uncal um, Median = 29725 (-130.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29721 (-130.5 uncal um), Max = 29732 (-130.5 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 23:00:34.178 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29725, posNoise = 7, negNoise = 4
17-03-17 23:00:34.178 -07 000000610 INF: Z Motor: After move to -0.131266, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:34.178 -07 000000610 INF: Z Motor: MoveAbsStepped took 283 ms)
17-03-17 23:00:34.178 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:34.178 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:34.178 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:34.178 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:34.178 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:34.178 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:34.178 -07 000000551 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:34.178 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:34.178 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:00:34.178 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:34.178 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:34.178 -07 000000551 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:34.188 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-17 23:00:34.188 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:34.188 -07 000000551 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 23:00:34.188 -07 000000551 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:34.198 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 23:00:34.198 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:00:34.198 -07 000000551 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 23:00:34.198 -07 000000551 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 23:00:34.198 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28852 150\n [Camera]
17-03-17 23:00:34.338 -07 000000547 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.99219,
17-03-17 23:00:34.398 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:34.858 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:34.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:34.858 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:34.858 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:34.858 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 23:00:34.868 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:34.868 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:34.868 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:34.868 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:34.868 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-17 23:00:35.058 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28852 849
17-03-17 23:00:35.208 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:35.248 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 23:00:35.248 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 23:00:35.248 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:35.248 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 23:00:35.248 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 23:00:35.248 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:35.248 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:35.258 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:35.258 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 23:00:35.258 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 23:00:35.428 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:35.428 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:35.428 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:35.428 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:35.428 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 23:00:35.428 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:35.428 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:35.428 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:35.428 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:35.428 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-17 23:00:35.618 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 23:00:35.618 -07 000000623 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:35.618 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28852 150' command took 2 ms to send, 1416 ms to get response, and 1421 ms overall
17-03-17 23:00:35.618 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131922
17-03-17 23:00:35.618 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13192 mm
17-03-17 23:00:35.628 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:35.628 -07 000000429 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-17 23:00:35.628 -07 000000429 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-17 23:00:35.628 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:35.628 -07 000000478 INF: Z Motor: Entering MoveAbsStepped (DAC = 28818, sync = True, waitForSettling = False)
17-03-17 23:00:35.628 -07 000000478 INF: Z Motor: Moving to -0.131920 mm, started at -0.131283 mm, distance = -0.64 um
17-03-17 23:00:35.628 -07 000000486 INF: FPGA: Recv YRDPOS 132871
17-03-17 23:00:35.638 -07 000000478 INF: FPGA: Xmit ZDACW 28818\n [Z Motor]
17-03-17 23:00:35.638 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:00:35.638 -07 000000429 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:35.638 -07 000000429 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:35.638 -07 000000429 INF: Y Motor: Moving 1351 steps-30
17-03-17 23:00:35.638 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 23:00:35.648 -07 000000478 INF: FPGA: 'ZDACW 28818' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-17 23:00:35.648 -07 000000429 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:35.658 -07 000000478 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:35.658 -07 000000462 INF: FPGA: Recv ZDACR 28818
17-03-17 23:00:35.668 -07 000000478 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:35.668 -07 000000478 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-17 23:00:35.818 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 23:00:35.818 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 23:00:35.818 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:35.818 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 23:00:35.818 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 23:00:35.818 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:35.818 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:35.818 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 23:00:35.818 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-17 23:00:35.828 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 23:00:36.018 -07 000000486 INF: FPGA: Recv YMVTILE
17-03-17 23:00:36.018 -07 000000429 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 23:00:36.058 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:36.068 -07 000000618 INF: FPGA: Recv YRDPOS 134581
17-03-17 23:00:36.068 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-17 23:00:36.068 -07 000000429 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:36.068 -07 000000429 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-17 23:00:36.068 -07 000000429 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.181 mm/sec
17-03-17 23:00:37.018 -07 000000429 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:37.018 -07 000000409 INF: FPGA: Recv YRDPOS 134581
17-03-17 23:00:37.028 -07 000000429 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.028 -07 000000429 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:37.028 -07 000000415 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:37.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:37.058 -07 000000429 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:37.058 -07 000000429 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:37.058 -07 000000429 INF: Y Motor: Moved to 65.7134 after 1430 ms (table move)
17-03-17 23:00:37.058 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131920 mm (DAC = 28818)
17-03-17 23:00:37.058 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.058 -07 000000541 INF: FPGA: Recv ZSGSRD 29822
17-03-17 23:00:37.068 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:37.068 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.068 -07 000000429 INF: FPGA: Recv ZSGSRD 29823
17-03-17 23:00:37.078 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.078 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.078 -07 000000541 INF: FPGA: Recv ZSGSRD 29829
17-03-17 23:00:37.088 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.088 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.088 -07 000000429 INF: FPGA: Recv ZSGSRD 29828
17-03-17 23:00:37.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.098 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.098 -07 000000448 INF: FPGA: Recv ZSGSRD 29830
17-03-17 23:00:37.108 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.108 -07 000000415 INF: FPGA: Recv ZSGSRD 29823
17-03-17 23:00:37.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.118 -07 000000462 INF: FPGA: Recv ZSGSRD 29820
17-03-17 23:00:37.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.128 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.128 -07 000000593 INF: FPGA: Recv ZSGSRD 29821
17-03-17 23:00:37.138 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.138 -07 000000475 INF: FPGA: Recv ZSGSRD 29821
17-03-17 23:00:37.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.148 -07 000000627 INF: FPGA: Recv ZSGSRD 29833
17-03-17 23:00:37.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.158 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:37.158 -07 000000486 INF: FPGA: Recv ZPIEZORD 25493
17-03-17 23:00:37.168 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.168 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.397 V. Piezo Error = -9.5 V.
17-03-17 23:00:37.168 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29825 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29823 (-131.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29820 (-131.1 uncal um), Max = 29833 (-131.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:00:37.168 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29825, posNoise = 8, negNoise = 5
17-03-17 23:00:37.168 -07 000000610 INF: Z Motor: After move to -0.131920, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:37.168 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 104 ms (allowed 150 ms), total time = 1536 ms
17-03-17 23:00:37.168 -07 000000610 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:37.218 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-17 23:00:37.218 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:37.218 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.131925479139156. ----------
17-03-17 23:00:37.218 -07 000000610 INF: Cycle	70	Tile	8	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:37.218 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28642, sync = True, waitForSettling = True)
17-03-17 23:00:37.218 -07 000000610 INF: Z Motor: Moving to -0.131115 mm, started at -0.131925 mm, distance = 0.81 um
17-03-17 23:00:37.218 -07 000000610 INF: FPGA: Xmit ZDACW 28642\n [Z Motor]
17-03-17 23:00:37.218 -07 000000382 INF: FPGA: Recv ZDACW
17-03-17 23:00:37.228 -07 000000610 INF: FPGA: 'ZDACW 28642' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:37.228 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:37.228 -07 000000623 INF: FPGA: Recv ZDACR 28642
17-03-17 23:00:37.238 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.238 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:37.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.388 -07 000000551 INF: FPGA: Recv ZSGSRD 29701
17-03-17 23:00:37.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.398 -07 000000502 INF: FPGA: Recv ZSGSRD 29704
17-03-17 23:00:37.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.408 -07 000000501 INF: FPGA: Recv ZSGSRD 29698
17-03-17 23:00:37.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.418 -07 000000409 INF: FPGA: Recv ZSGSRD 29702
17-03-17 23:00:37.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.428 -07 000000576 INF: FPGA: Recv ZSGSRD 29700
17-03-17 23:00:37.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.438 -07 000000415 INF: FPGA: Recv ZSGSRD 29700
17-03-17 23:00:37.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.448 -07 000000618 INF: FPGA: Recv ZSGSRD 29700
17-03-17 23:00:37.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.458 -07 000000593 INF: FPGA: Recv ZSGSRD 29704
17-03-17 23:00:37.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.468 -07 000000627 INF: FPGA: Recv ZSGSRD 29703
17-03-17 23:00:37.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:37.478 -07 000000462 INF: FPGA: Recv ZSGSRD 29699
17-03-17 23:00:37.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.488 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:37.488 -07 000000475 INF: FPGA: Recv ZPIEZORD 25325
17-03-17 23:00:37.498 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:37.498 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.370 V. Piezo Error = -9.6 V.
17-03-17 23:00:37.498 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29701 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29700 (-130.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29698 (-130.3 uncal um), Max = 29704 (-130.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 23:00:37.498 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29701, posNoise = 3, negNoise = 3
17-03-17 23:00:37.498 -07 000000610 INF: Z Motor: After move to -0.131115, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:37.498 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 23:00:37.498 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:37.498 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:37.498 -07 000000593 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:37.498 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:37.498 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:37.498 -07 000000541 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:37.498 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:37.498 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:37.498 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:00:37.498 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:37.508 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 23:00:37.508 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:37.508 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:00:37.508 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:37.508 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:37.508 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:37.518 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 23:00:37.518 -07 000000501 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-17 23:00:37.518 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 23:00:37.518 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:00:37.518 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28818 150\n [Camera]
17-03-17 23:00:37.718 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:38.178 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:38.178 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:38.188 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:38.188 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:38.188 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-17 23:00:38.188 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:38.188 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:38.188 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:38.188 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:38.188 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-17 23:00:38.378 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28818 849
17-03-17 23:00:38.528 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:38.568 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 23:00:38.568 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 23:00:38.568 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:38.688 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 503 ms.
17-03-17 23:00:38.688 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 504 ms.
17-03-17 23:00:38.688 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:38.698 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 128 ms.
17-03-17 23:00:38.698 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 511 ms.
17-03-17 23:00:38.698 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:38.708 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 517 ms.
17-03-17 23:00:38.748 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:38.748 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:38.748 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:38.748 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:38.748 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:38.748 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:38.758 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:38.758 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 23:00:38.758 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:38.758 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-17 23:00:38.938 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1417
17-03-17 23:00:38.948 -07 000000486 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:38.948 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28818 150' command took 2 ms to send, 1420 ms to get response, and 1424 ms overall
17-03-17 23:00:38.948 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131458
17-03-17 23:00:38.948 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13146 mm
17-03-17 23:00:38.948 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:38.948 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-17 23:00:38.948 -07 000000448 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-17 23:00:38.948 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:38.948 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 28717, sync = True, waitForSettling = False)
17-03-17 23:00:38.948 -07 000000593 INF: Z Motor: Moving to -0.131458 mm, started at -0.131129 mm, distance = -0.33 um
17-03-17 23:00:38.948 -07 000000576 INF: FPGA: Recv YRDPOS 134581
17-03-17 23:00:38.958 -07 000000593 INF: FPGA: Xmit ZDACW 28717\n [Z Motor]
17-03-17 23:00:38.958 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:00:38.958 -07 000000448 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:38.958 -07 000000448 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:38.958 -07 000000448 INF: Y Motor: Moving 1343 steps-19
17-03-17 23:00:38.958 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 23:00:38.968 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:38.968 -07 000000593 INF: FPGA: 'ZDACW 28717' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-17 23:00:38.978 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:38.978 -07 000000551 INF: FPGA: Recv ZDACR 28717
17-03-17 23:00:38.988 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:38.988 -07 000000593 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-17 23:00:39.138 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 23:00:39.138 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 23:00:39.138 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:39.138 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 23:00:39.138 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-17 23:00:39.138 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:39.138 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:39.138 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-17 23:00:39.148 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:39.148 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 23:00:39.338 -07 000000478 INF: FPGA: Recv YMVTILE
17-03-17 23:00:39.338 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-17 23:00:39.388 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:39.388 -07 000000429 INF: FPGA: Recv YRDPOS 136271
17-03-17 23:00:39.398 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:39.398 -07 000000448 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:39.398 -07 000000448 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 23:00:39.398 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.169 mm/sec
17-03-17 23:00:39.698 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.004458,
17-03-17 23:00:40.348 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:40.348 -07 000000429 INF: FPGA: Recv YRDPOS 136271
17-03-17 23:00:40.358 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:40.358 -07 000000448 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:40.378 -07 000000448 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:40.378 -07 000000448 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:40.378 -07 000000448 INF: Y Motor: Moved to 66.5386 after 1432 ms (table move)
17-03-17 23:00:40.378 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131458 mm (DAC = 28717)
17-03-17 23:00:40.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.388 -07 000000627 INF: FPGA: Recv ZSGSRD 29754
17-03-17 23:00:40.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:40.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.398 -07 000000623 INF: FPGA: Recv ZSGSRD 29757
17-03-17 23:00:40.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.408 -07 000000576 INF: FPGA: Recv ZSGSRD 29758
17-03-17 23:00:40.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.418 -07 000000547 INF: FPGA: Recv ZSGSRD 29757
17-03-17 23:00:40.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.428 -07 000000623 INF: FPGA: Recv ZSGSRD 29751
17-03-17 23:00:40.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.438 -07 000000618 INF: FPGA: Recv ZSGSRD 29768
17-03-17 23:00:40.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.448 -07 000000627 INF: FPGA: Recv ZSGSRD 29750
17-03-17 23:00:40.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.458 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.458 -07 000000475 INF: FPGA: Recv ZSGSRD 29745
17-03-17 23:00:40.468 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.468 -07 000000415 INF: FPGA: Recv ZSGSRD 29757
17-03-17 23:00:40.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.478 -07 000000429 INF: FPGA: Recv ZSGSRD 29755
17-03-17 23:00:40.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.488 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:40.488 -07 000000551 INF: FPGA: Recv ZPIEZORD 25414
17-03-17 23:00:40.498 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.498 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.382 V. Piezo Error = -9.5 V.
17-03-17 23:00:40.498 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29755 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29756 (-130.7 uncal um), StdDev = 6 (0.0 uncal um), Range = 23 (0.1 uncal um), Min = 29745 (-130.6 uncal um), Max = 29768 (-130.8 uncal um), Pos Noise = 13 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-17 23:00:40.498 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29755, posNoise = 13, negNoise = 10
17-03-17 23:00:40.498 -07 000000610 INF: Z Motor: After move to -0.131458, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:40.498 -07 000000610 INF: Z Motor: Settle wait time = 1434 ms, measure time = 111 ms (allowed 150 ms), total time = 1545 ms
17-03-17 23:00:40.498 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:40.538 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-17 23:00:40.538 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:40.538 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.131475784289232. ----------
17-03-17 23:00:40.538 -07 000000610 INF: Cycle	70	Tile	9	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:40.538 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28540, sync = True, waitForSettling = True)
17-03-17 23:00:40.538 -07 000000610 INF: Z Motor: Moving to -0.130648 mm, started at -0.131476 mm, distance = 0.83 um
17-03-17 23:00:40.538 -07 000000610 INF: FPGA: Xmit ZDACW 28540\n [Z Motor]
17-03-17 23:00:40.538 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 23:00:40.548 -07 000000610 INF: FPGA: 'ZDACW 28540' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:40.548 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:40.548 -07 000000618 INF: FPGA: Recv ZDACR 28540
17-03-17 23:00:40.558 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.558 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:40.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.708 -07 000000627 INF: FPGA: Recv ZSGSRD 29632
17-03-17 23:00:40.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.718 -07 000000462 INF: FPGA: Recv ZSGSRD 29621
17-03-17 23:00:40.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.728 -07 000000415 INF: FPGA: Recv ZSGSRD 29634
17-03-17 23:00:40.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.738 -07 000000482 INF: FPGA: Recv ZSGSRD 29627
17-03-17 23:00:40.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.748 -07 000000618 INF: FPGA: Recv ZSGSRD 29629
17-03-17 23:00:40.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.758 -07 000000541 INF: FPGA: Recv ZSGSRD 29626
17-03-17 23:00:40.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.768 -07 000000486 INF: FPGA: Recv ZSGSRD 29625
17-03-17 23:00:40.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.778 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.778 -07 000000448 INF: FPGA: Recv ZSGSRD 29634
17-03-17 23:00:40.788 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.788 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.788 -07 000000409 INF: FPGA: Recv ZSGSRD 29626
17-03-17 23:00:40.798 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.798 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:40.798 -07 000000462 INF: FPGA: Recv ZSGSRD 29626
17-03-17 23:00:40.808 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.808 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:40.808 -07 000000551 INF: FPGA: Recv ZPIEZORD 25224
17-03-17 23:00:40.818 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:40.818 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.355 V. Piezo Error = -9.7 V.
17-03-17 23:00:40.818 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29628 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29626 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29621 (-129.8 uncal um), Max = 29634 (-129.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:40.818 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29628, posNoise = 6, negNoise = 7
17-03-17 23:00:40.818 -07 000000610 INF: Z Motor: After move to -0.130648, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:40.818 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 23:00:40.818 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:40.818 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:40.818 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:40.818 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:40.818 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:40.818 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:40.818 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:40.818 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:40.818 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:40.818 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:40.818 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:40.818 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:40.818 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:40.818 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:40.828 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:40.828 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:40.838 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 23:00:40.838 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 23:00:40.838 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 23:00:40.838 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 23:00:40.838 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28717 150\n [Camera]
17-03-17 23:00:41.048 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP turning red on 194
17-03-17 23:00:41.508 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:41.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:41.508 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:41.508 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:41.508 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) start.
17-03-17 23:00:41.508 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:41.508 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:41.508 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:41.508 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:41.508 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) start.
17-03-17 23:00:41.698 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28717 849
17-03-17 23:00:41.848 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:41.888 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 2164362856, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 23:00:41.888 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 23:00:41.888 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:41.888 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2199785120, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 23:00:41.888 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 23:00:41.888 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:41.888 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:41.888 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 23:00:41.888 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:41.898 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 23:00:42.028 -07 000000623 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:42.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:42.068 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:42.068 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:42.068 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:42.068 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:42.068 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) start.
17-03-17 23:00:42.078 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:42.078 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:42.078 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:42.078 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:42.078 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 23:00:42.258 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:42.268 -07 000000593 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:42.268 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28717 150' command took 2 ms to send, 1410 ms to get response, and 1421 ms overall
17-03-17 23:00:42.268 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131400
17-03-17 23:00:42.268 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13140 mm
17-03-17 23:00:42.268 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:42.388 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28704, sync = True, waitForSettling = False)
17-03-17 23:00:42.388 -07 000000576 INF: Z Motor: Moving to -0.131398 mm, started at -0.130660 mm, distance = -0.74 um
17-03-17 23:00:42.388 -07 000000576 INF: FPGA: Xmit ZDACW 28704\n [Z Motor]
17-03-17 23:00:42.388 -07 000000482 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-17 23:00:42.388 -07 000000482 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-17 23:00:42.388 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 23:00:42.398 -07 000000576 INF: FPGA: 'ZDACW 28704' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:42.398 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:42.398 -07 000000547 INF: FPGA: Recv ZDACR 28704
17-03-17 23:00:42.408 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:42.408 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:42.408 -07 000000576 INF: Z Motor: MoveAbsStepped took 18 ms (did NOT wait for settling yet))
17-03-17 23:00:42.408 -07 000000623 INF: FPGA: Recv YRDPOS 136271
17-03-17 23:00:42.418 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-17 23:00:42.418 -07 000000482 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:42.418 -07 000000482 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:42.418 -07 000000482 INF: Y Motor: Moving 1350 steps-29
17-03-17 23:00:42.418 -07 000000482 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:42.478 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 2235207384, 0x0, 391868352) end. Duration was 400 ms.
17-03-17 23:00:42.478 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 23:00:42.478 -07 000000551 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:42.478 -07 000000551 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:42.478 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-17 23:00:42.488 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 405 ms.
17-03-17 23:00:42.488 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-17 23:00:42.488 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:42.488 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:42.508 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 425 ms.
17-03-17 23:00:42.788 -07 000000627 INF: FPGA: Recv YMVTILE
17-03-17 23:00:42.788 -07 000000482 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-17 23:00:42.838 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:42.838 -07 000000409 INF: FPGA: Recv YRDPOS 137977
17-03-17 23:00:42.848 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:42.848 -07 000000482 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:42.848 -07 000000482 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-17 23:00:42.848 -07 000000482 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.233 mm/sec
17-03-17 23:00:43.798 -07 000000482 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:43.798 -07 000000618 INF: FPGA: Recv YRDPOS 137977
17-03-17 23:00:43.808 -07 000000482 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:43.808 -07 000000482 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:43.828 -07 000000482 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:43.828 -07 000000482 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:43.828 -07 000000482 INF: Y Motor: Moved to 67.3716 after 1442 ms (table move)
17-03-17 23:00:43.828 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131398 mm (DAC = 28704)
17-03-17 23:00:43.828 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.838 -07 000000475 INF: FPGA: Recv ZSGSRD 29742
17-03-17 23:00:43.838 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 23:00:43.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.838 -07 000000409 INF: FPGA: Recv ZSGSRD 29735
17-03-17 23:00:43.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.848 -07 000000478 INF: FPGA: Recv ZSGSRD 29744
17-03-17 23:00:43.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.858 -07 000000623 INF: FPGA: Recv ZSGSRD 29744
17-03-17 23:00:43.868 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.868 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.868 -07 000000618 INF: FPGA: Recv ZSGSRD 29743
17-03-17 23:00:43.878 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.878 -07 000000541 INF: FPGA: Recv ZSGSRD 29741
17-03-17 23:00:43.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.888 -07 000000429 INF: FPGA: Recv ZSGSRD 29741
17-03-17 23:00:43.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.898 -07 000000486 INF: FPGA: Recv ZSGSRD 29741
17-03-17 23:00:43.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.908 -07 000000576 INF: FPGA: Recv ZSGSRD 29743
17-03-17 23:00:43.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:43.918 -07 000000551 INF: FPGA: Recv ZSGSRD 29750
17-03-17 23:00:43.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.928 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:43.928 -07 000000482 INF: FPGA: Recv ZPIEZORD 25397
17-03-17 23:00:43.938 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:43.938 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.380 V. Piezo Error = -9.5 V.
17-03-17 23:00:43.938 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29742 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29742 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29735 (-130.6 uncal um), Max = 29750 (-130.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:43.938 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29742, posNoise = 8, negNoise = 7
17-03-17 23:00:43.938 -07 000000610 INF: Z Motor: After move to -0.131398, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:43.938 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 102 ms (allowed 150 ms), total time = 1548 ms
17-03-17 23:00:43.938 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:43.988 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1717 ms
17-03-17 23:00:43.988 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:43.988 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.131392269531389. ----------
17-03-17 23:00:43.988 -07 000000610 INF: Cycle	70	Tile	10	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:43.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28528, sync = True, waitForSettling = True)
17-03-17 23:00:43.988 -07 000000610 INF: Z Motor: Moving to -0.130593 mm, started at -0.131392 mm, distance = 0.80 um
17-03-17 23:00:43.988 -07 000000610 INF: FPGA: Xmit ZDACW 28528\n [Z Motor]
17-03-17 23:00:43.988 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 23:00:43.998 -07 000000610 INF: FPGA: 'ZDACW 28528' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:00:43.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:43.998 -07 000000482 INF: FPGA: Recv ZDACR 28528
17-03-17 23:00:44.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:44.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.158 -07 000000627 INF: FPGA: Recv ZSGSRD 29625
17-03-17 23:00:44.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:44.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.168 -07 000000593 INF: FPGA: Recv ZSGSRD 29623
17-03-17 23:00:44.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.178 -07 000000623 INF: FPGA: Recv ZSGSRD 29618
17-03-17 23:00:44.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.188 -07 000000409 INF: FPGA: Recv ZSGSRD 29620
17-03-17 23:00:44.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.198 -07 000000502 INF: FPGA: Recv ZSGSRD 29617
17-03-17 23:00:44.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:44.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.208 -07 000000623 INF: FPGA: Recv ZSGSRD 29619
17-03-17 23:00:44.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.218 -07 000000551 INF: FPGA: Recv ZSGSRD 29620
17-03-17 23:00:44.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.228 -07 000000475 INF: FPGA: Recv ZSGSRD 29623
17-03-17 23:00:44.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.238 -07 000000501 INF: FPGA: Recv ZSGSRD 29617
17-03-17 23:00:44.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:44.248 -07 000000478 INF: FPGA: Recv ZSGSRD 29620
17-03-17 23:00:44.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.258 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:44.258 -07 000000623 INF: FPGA: Recv ZPIEZORD 25225
17-03-17 23:00:44.268 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:44.268 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.353 V. Piezo Error = -9.6 V.
17-03-17 23:00:44.268 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29620 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29620 (-129.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29617 (-129.8 uncal um), Max = 29625 (-129.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 23:00:44.268 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29620, posNoise = 5, negNoise = 3
17-03-17 23:00:44.268 -07 000000610 INF: Z Motor: After move to -0.130593, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:44.268 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 23:00:44.268 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:44.268 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:44.268 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:44.268 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:44.268 -07 000000475 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:44.268 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:44.268 -07 000000478 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:44.268 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:44.268 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:44.268 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:44.268 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:44.268 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:44.278 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:44.278 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:44.278 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:00:44.278 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:44.288 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 23:00:44.288 -07 000000478 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 23:00:44.288 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 23:00:44.288 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 23:00:44.298 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28704 150\n [Camera]
17-03-17 23:00:44.498 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:44.958 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:44.958 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:44.958 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:44.958 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:44.958 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:44.958 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:44.968 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:44.968 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 23:00:44.968 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:44.968 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 23:00:45.058 -07 000000475 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.989471,
17-03-17 23:00:45.148 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28704 849
17-03-17 23:00:45.298 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:45.338 -07 000000448 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms.
17-03-17 23:00:45.338 -07 000000448 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-17 23:00:45.338 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:45.338 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:45.338 -07 000000448 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 23:00:45.338 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 23:00:45.338 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-17 23:00:45.338 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:45.348 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:45.348 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 23:00:45.528 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:45.528 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:45.528 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:45.528 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:45.528 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:45.528 -07 000000551 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:45.528 -07 000000551 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:45.528 -07 000000551 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 23:00:45.538 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:45.538 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-17 23:00:45.718 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:45.718 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:45.718 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28704 150' command took 2 ms to send, 1412 ms to get response, and 1421 ms overall
17-03-17 23:00:45.718 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:00:45.718 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37158203125, Z-Position -0.130608515650095. ------
17-03-17 23:00:45.718 -07 000000429 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:45.718 -07 000000547 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13704 mm
17-03-17 23:00:45.718 -07 000000547 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:45.728 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:45.728 -07 000000429 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:45.728 -07 000000429 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:00:45.728 -07 000000448 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-17 23:00:45.728 -07 000000448 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-17 23:00:45.728 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 29937, sync = True, waitForSettling = False)
17-03-17 23:00:45.728 -07 000000618 INF: Z Motor: Moving to -0.137043 mm, started at -0.130609 mm, distance = -6.43 um
17-03-17 23:00:45.738 -07 000000618 INF: FPGA: Xmit ZDACW 29937\n [Z Motor]
17-03-17 23:00:45.738 -07 000000482 INF: FPGA: Recv ZDACW
17-03-17 23:00:45.748 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:45.748 -07 000000618 INF: FPGA: 'ZDACW 29937' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 23:00:45.748 -07 000000409 INF: FPGA: Recv YRDPOS 137977
17-03-17 23:00:45.758 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:45.758 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 23:00:45.758 -07 000000448 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:45.758 -07 000000448 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:45.758 -07 000000448 INF: Y Motor: Moving 1346 steps-23
17-03-17 23:00:45.758 -07 000000482 INF: FPGA: Recv ZDACR 29937
17-03-17 23:00:45.768 -07 000000448 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:45.768 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:45.768 -07 000000618 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-17 23:00:45.908 -07 000000551 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 23:00:45.908 -07 000000551 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 23:00:45.908 -07 000000551 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:45.908 -07 000000551 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:45.918 -07 000000627 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 23:00:45.918 -07 000000627 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 23:00:45.918 -07 000000627 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:45.918 -07 000000551 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-17 23:00:45.918 -07 000000627 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:45.918 -07 000000627 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 23:00:45.928 -07 000000576 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:00:45.928 -07 000000429 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 194 ms to get response, and 202 ms overall
17-03-17 23:00:46.148 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-17 23:00:46.148 -07 000000448 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 389 ms overall
17-03-17 23:00:46.188 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:46.188 -07 000000382 INF: FPGA: Recv YRDPOS 139683
17-03-17 23:00:46.198 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:46.198 -07 000000448 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:46.198 -07 000000448 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-17 23:00:46.198 -07 000000448 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.841 mm, average velocity = 2.162 mm/sec
17-03-17 23:00:47.028 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:47.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:47.148 -07 000000448 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:47.148 -07 000000561 INF: FPGA: Recv YRDPOS 139683
17-03-17 23:00:47.158 -07 000000448 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:47.158 -07 000000448 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:47.178 -07 000000448 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:47.178 -07 000000448 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:47.178 -07 000000448 INF: Y Motor: Moved to 68.2046 after 1453 ms (table move)
17-03-17 23:00:47.178 -07 000000547 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137043 mm (DAC = 29937)
17-03-17 23:00:47.178 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.188 -07 000000501 INF: FPGA: Recv ZSGSRD 30630
17-03-17 23:00:47.188 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 23:00:47.188 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.188 -07 000000627 INF: FPGA: Recv ZSGSRD 30627
17-03-17 23:00:47.198 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:47.198 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.198 -07 000000429 INF: FPGA: Recv ZSGSRD 30627
17-03-17 23:00:47.208 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.208 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.208 -07 000000475 INF: FPGA: Recv ZSGSRD 30618
17-03-17 23:00:47.218 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.218 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.218 -07 000000623 INF: FPGA: Recv ZSGSRD 30623
17-03-17 23:00:47.228 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.228 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.228 -07 000000561 INF: FPGA: Recv ZSGSRD 30622
17-03-17 23:00:47.238 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.238 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.238 -07 000000541 INF: FPGA: Recv ZSGSRD 30627
17-03-17 23:00:47.248 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.248 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.248 -07 000000482 INF: FPGA: Recv ZSGSRD 30621
17-03-17 23:00:47.258 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.258 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.258 -07 000000462 INF: FPGA: Recv ZSGSRD 30621
17-03-17 23:00:47.268 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.268 -07 000000547 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:47.268 -07 000000623 INF: FPGA: Recv ZSGSRD 30632
17-03-17 23:00:47.278 -07 000000547 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.278 -07 000000547 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:47.278 -07 000000486 INF: FPGA: Recv ZPIEZORD 26563
17-03-17 23:00:47.288 -07 000000547 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.288 -07 000000547 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 45.7 V, since DAC is at 4.568 V. Piezo Error = -8.9 V.
17-03-17 23:00:47.288 -07 000000547 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.0 um, Read 10 ADC samples: Avg = 30625 (-136.3 uncal um), Error = 0.8 uncal um, Median = 30625 (-136.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30618 (-136.2 uncal um), Max = 30632 (-136.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:47.288 -07 000000547 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30625, posNoise = 7, negNoise = 7
17-03-17 23:00:47.288 -07 000000547 INF: Z Motor: After move to -0.137043, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:47.288 -07 000000547 INF: Z Motor: Settle wait time = 1456 ms, measure time = 102 ms (allowed 150 ms), total time = 1558 ms
17-03-17 23:00:47.288 -07 000000547 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:47.338 -07 000000547 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-17 23:00:47.338 -07 000000547 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:47.338 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:47.338 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:47.338 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:47.338 -07 000000429 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:47.338 -07 000000409 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:00:47.338 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:47.338 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:47.338 -07 000000409 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:00:47.348 -07 000000409 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:47.348 -07 000000409 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:00:47.358 -07 000000409 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 23:00:47.358 -07 000000409 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 23:00:47.358 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:00:47.398 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:00:47.598 -07 000000478 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:00:47.598 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:00:47.598 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:00:47.608 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-17 23:00:47.638 -07 000000501 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:00:47.648 -07 000000409 INF: FPGA: Recv CAMSNAP
17-03-17 23:00:47.648 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 287 ms overall
17-03-17 23:00:47.728 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 23:00:47.728 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:47.728 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:00:47.728 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-17 23:00:47.748 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:47.748 -07 000000618 INF: Autofocus start
17-03-17 23:00:47.748 -07 000000618 INF: MeasureProfile start
17-03-17 23:00:47.748 -07 000000415 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:47.758 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:47.758 -07 000000547 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:00:47.758 -07 000000618 INF: MeasureProfile done
17-03-17 23:00:47.758 -07 000000618 INF: X=16  Z correction [um]=0.0530179
17-03-17 23:00:47.758 -07 000000618 INF: Autofocus finished
17-03-17 23:00:47.958 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:00:47.958 -07 000000547 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:00:47.958 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.137064848852564. ----------
17-03-17 23:00:47.958 -07 000000610 INF: Cycle	70	Tile	11	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:47.968 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28462, sync = True, waitForSettling = True)
17-03-17 23:00:47.968 -07 000000610 INF: Z Motor: Moving to -0.130291 mm, started at -0.137065 mm, distance = 6.77 um
17-03-17 23:00:47.968 -07 000000610 INF: FPGA: Xmit ZDACW 28462\n [Z Motor]
17-03-17 23:00:47.968 -07 000000501 INF: FPGA: Recv ZDACW
17-03-17 23:00:47.978 -07 000000610 INF: FPGA: 'ZDACW 28462' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:47.978 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:47.978 -07 000000415 INF: FPGA: Recv ZDACR 28462
17-03-17 23:00:47.988 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:47.988 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:48.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.138 -07 000000478 INF: FPGA: Recv ZSGSRD 29577
17-03-17 23:00:48.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:48.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.148 -07 000000382 INF: FPGA: Recv ZSGSRD 29572
17-03-17 23:00:48.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.158 -07 000000502 INF: FPGA: Recv ZSGSRD 29570
17-03-17 23:00:48.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.168 -07 000000618 INF: FPGA: Recv ZSGSRD 29575
17-03-17 23:00:48.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.178 -07 000000475 INF: FPGA: Recv ZSGSRD 29575
17-03-17 23:00:48.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.188 -07 000000618 INF: FPGA: Recv ZSGSRD 29571
17-03-17 23:00:48.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.198 -07 000000429 INF: FPGA: Recv ZSGSRD 29575
17-03-17 23:00:48.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.208 -07 000000576 INF: FPGA: Recv ZSGSRD 29571
17-03-17 23:00:48.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.218 -07 000000475 INF: FPGA: Recv ZSGSRD 29569
17-03-17 23:00:48.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:48.228 -07 000000501 INF: FPGA: Recv ZSGSRD 29569
17-03-17 23:00:48.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.238 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:48.238 -07 000000502 INF: FPGA: Recv ZPIEZORD 25206
17-03-17 23:00:48.248 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:48.248 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.343 V. Piezo Error = -9.6 V.
17-03-17 23:00:48.248 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29572 (-129.5 uncal um), Error = 0.8 uncal um, Median = 29572 (-129.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29569 (-129.5 uncal um), Max = 29577 (-129.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 23:00:48.248 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29572, posNoise = 5, negNoise = 3
17-03-17 23:00:48.248 -07 000000610 INF: Z Motor: After move to -0.130291, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:48.248 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 23:00:48.248 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:48.248 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:48.248 -07 000000551 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:48.248 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:48.248 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:48.248 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:48.248 -07 000000593 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 23:00:48.248 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:48.248 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:48.248 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:48.258 -07 000000623 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-17 23:00:48.258 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:48.258 -07 000000593 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:48.258 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:48.258 -07 000000623 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:00:48.258 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:48.268 -07 000000593 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 23:00:48.268 -07 000000593 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:00:48.268 -07 000000623 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-17 23:00:48.268 -07 000000623 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 23:00:48.268 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28638 150\n [Camera]
17-03-17 23:00:48.468 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:48.928 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:48.928 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:48.938 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:48.938 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:48.938 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 23:00:48.938 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:48.938 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:48.938 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:48.938 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:48.938 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-17 23:00:49.128 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28638 849
17-03-17 23:00:49.278 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:49.318 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 23:00:49.318 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 23:00:49.318 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 23:00:49.318 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:49.318 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 23:00:49.318 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:49.318 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:49.318 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 23:00:49.318 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:49.328 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 23:00:49.498 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:49.498 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:49.498 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:49.498 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:49.498 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-17 23:00:49.498 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:49.498 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:49.498 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:49.628 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:49.628 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-17 23:00:49.688 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:49.688 -07 000000448 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:49.688 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28638 150' command took 2 ms to send, 1417 ms to get response, and 1422 ms overall
17-03-17 23:00:49.688 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130937
17-03-17 23:00:49.688 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13094 mm
17-03-17 23:00:49.698 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:49.708 -07 000000593 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-17 23:00:49.708 -07 000000593 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-17 23:00:49.708 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:49.708 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 28603, sync = True, waitForSettling = False)
17-03-17 23:00:49.708 -07 000000547 INF: Z Motor: Moving to -0.130936 mm, started at -0.130300 mm, distance = -0.64 um
17-03-17 23:00:49.708 -07 000000486 INF: FPGA: Recv YRDPOS 139684
17-03-17 23:00:49.718 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:49.718 -07 000000593 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:49.718 -07 000000547 INF: FPGA: Xmit ZDACW 28603\n [Z Motor]
17-03-17 23:00:49.718 -07 000000561 INF: FPGA: Recv ZDACW
17-03-17 23:00:49.718 -07 000000593 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:49.718 -07 000000593 INF: Y Motor: Moving 1340 steps-16
17-03-17 23:00:49.728 -07 000000547 INF: FPGA: 'ZDACW 28603' command took 1 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 23:00:49.728 -07 000000593 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:49.738 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:49.738 -07 000000618 INF: FPGA: Recv ZDACR 28603
17-03-17 23:00:49.748 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:49.748 -07 000000547 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-17 23:00:49.888 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 391 ms.
17-03-17 23:00:49.888 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 23:00:49.888 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:49.898 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 23:00:49.898 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-17 23:00:50.008 -07 000000429 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 374 ms.
17-03-17 23:00:50.008 -07 000000429 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-17 23:00:50.008 -07 000000429 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:50.008 -07 000000429 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-17 23:00:50.018 -07 000000429 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 514 ms.
17-03-17 23:00:50.098 -07 000000623 INF: FPGA: Recv YMVTILE
17-03-17 23:00:50.098 -07 000000593 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 381 ms overall
17-03-17 23:00:50.148 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:50.148 -07 000000475 INF: FPGA: Recv YRDPOS 141366
17-03-17 23:00:50.158 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:50.158 -07 000000593 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:50.158 -07 000000593 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-17 23:00:50.158 -07 000000593 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.838 mm, average velocity = 2.200 mm/sec
17-03-17 23:00:50.418 -07 000000478 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.99219,
17-03-17 23:00:51.108 -07 000000593 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:51.108 -07 000000623 INF: FPGA: Recv YRDPOS 141367
17-03-17 23:00:51.118 -07 000000593 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:51.118 -07 000000593 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:51.138 -07 000000593 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:51.138 -07 000000593 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 23:00:51.138 -07 000000593 INF: Y Motor: Moved to 69.0269 after 1434 ms (table move)
17-03-17 23:00:51.138 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130936 mm (DAC = 28603)
17-03-17 23:00:51.138 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.148 -07 000000478 INF: FPGA: Recv ZSGSRD 29670
17-03-17 23:00:51.148 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 4 ms to get response, and 5 ms overall
17-03-17 23:00:51.148 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.148 -07 000000593 INF: FPGA: Recv ZSGSRD 29683
17-03-17 23:00:51.158 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:00:51.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.158 -07 000000502 INF: FPGA: Recv ZSGSRD 29676
17-03-17 23:00:51.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.168 -07 000000541 INF: FPGA: Recv ZSGSRD 29672
17-03-17 23:00:51.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.178 -07 000000475 INF: FPGA: Recv ZSGSRD 29665
17-03-17 23:00:51.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.188 -07 000000623 INF: FPGA: Recv ZSGSRD 29667
17-03-17 23:00:51.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.198 -07 000000593 INF: FPGA: Recv ZSGSRD 29672
17-03-17 23:00:51.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.208 -07 000000482 INF: FPGA: Recv ZSGSRD 29669
17-03-17 23:00:51.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.218 -07 000000409 INF: FPGA: Recv ZSGSRD 29671
17-03-17 23:00:51.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.228 -07 000000547 INF: FPGA: Recv ZSGSRD 29676
17-03-17 23:00:51.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.238 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:51.238 -07 000000478 INF: FPGA: Recv ZPIEZORD 25356
17-03-17 23:00:51.248 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.248 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.365 V. Piezo Error = -9.5 V.
17-03-17 23:00:51.248 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.9 um, Read 10 ADC samples: Avg = 29672 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29672 (-130.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29665 (-130.1 uncal um), Max = 29683 (-130.2 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:00:51.248 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29672, posNoise = 11, negNoise = 7
17-03-17 23:00:51.248 -07 000000610 INF: Z Motor: After move to -0.130936, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:51.248 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 103 ms (allowed 150 ms), total time = 1538 ms
17-03-17 23:00:51.248 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:51.298 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-17 23:00:51.298 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:51.298 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.130942574681466. ----------
17-03-17 23:00:51.298 -07 000000610 INF: Cycle	70	Tile	12	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:51.298 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28426, sync = True, waitForSettling = True)
17-03-17 23:00:51.298 -07 000000610 INF: Z Motor: Moving to -0.130126 mm, started at -0.130943 mm, distance = 0.82 um
17-03-17 23:00:51.298 -07 000000610 INF: FPGA: Xmit ZDACW 28426\n [Z Motor]
17-03-17 23:00:51.298 -07 000000415 INF: FPGA: Recv ZDACW
17-03-17 23:00:51.308 -07 000000610 INF: FPGA: 'ZDACW 28426' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:51.308 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:51.308 -07 000000618 INF: FPGA: Recv ZDACR 28426
17-03-17 23:00:51.318 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.318 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:51.468 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.468 -07 000000429 INF: FPGA: Recv ZSGSRD 29546
17-03-17 23:00:51.478 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.478 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.478 -07 000000462 INF: FPGA: Recv ZSGSRD 29554
17-03-17 23:00:51.488 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.488 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.488 -07 000000486 INF: FPGA: Recv ZSGSRD 29543
17-03-17 23:00:51.498 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.498 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.498 -07 000000409 INF: FPGA: Recv ZSGSRD 29545
17-03-17 23:00:51.508 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.508 -07 000000618 INF: FPGA: Recv ZSGSRD 29540
17-03-17 23:00:51.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.518 -07 000000429 INF: FPGA: Recv ZSGSRD 29542
17-03-17 23:00:51.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.528 -07 000000623 INF: FPGA: Recv ZSGSRD 29549
17-03-17 23:00:51.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.538 -07 000000486 INF: FPGA: Recv ZSGSRD 29543
17-03-17 23:00:51.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.548 -07 000000382 INF: FPGA: Recv ZSGSRD 29548
17-03-17 23:00:51.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:51.558 -07 000000618 INF: FPGA: Recv ZSGSRD 29549
17-03-17 23:00:51.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.568 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:51.568 -07 000000429 INF: FPGA: Recv ZPIEZORD 25195
17-03-17 23:00:51.578 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:51.578 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.338 V. Piezo Error = -9.6 V.
17-03-17 23:00:51.578 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29546 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29546 (-129.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29540 (-129.3 uncal um), Max = 29554 (-129.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-17 23:00:51.578 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29546, posNoise = 8, negNoise = 6
17-03-17 23:00:51.578 -07 000000610 INF: Z Motor: After move to -0.130126, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:51.578 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-17 23:00:51.578 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:51.578 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:51.578 -07 000000478 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:51.578 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:51.578 -07 000000415 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:51.578 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:51.578 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:51.578 -07 000000478 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:51.578 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:51.578 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:51.578 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:51.578 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:51.588 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:00:51.588 -07 000000478 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:51.588 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:51.588 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:51.598 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 23:00:51.598 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms.
17-03-17 23:00:51.598 -07 000000478 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 23:00:51.598 -07 000000478 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:00:51.598 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28603 150\n [Camera]
17-03-17 23:00:51.798 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:52.028 -07 000000486 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:52.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:52.258 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:52.258 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:52.258 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:52.258 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:52.258 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:52.268 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:52.278 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:52.278 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-17 23:00:52.278 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:52.278 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-17 23:00:52.448 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28603 849
17-03-17 23:00:52.598 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:52.658 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 381 ms.
17-03-17 23:00:52.658 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-17 23:00:52.658 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:52.658 -07 000000482 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 23:00:52.658 -07 000000482 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 23:00:52.658 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:52.658 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:52.668 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 23:00:52.668 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:52.668 -07 000000482 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-17 23:00:52.828 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:52.828 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:52.828 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:52.828 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:52.828 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:52.828 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:52.828 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:52.828 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-17 23:00:52.838 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:52.838 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-17 23:00:53.018 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:53.018 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:53.018 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28603 150' command took 2 ms to send, 1414 ms to get response, and 1421 ms overall
17-03-17 23:00:53.018 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130507
17-03-17 23:00:53.018 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13051 mm
17-03-17 23:00:53.018 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:53.018 -07 000000475 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-17 23:00:53.018 -07 000000475 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-17 23:00:53.018 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:53.018 -07 000000448 INF: Z Motor: Entering MoveAbsStepped (DAC = 28509, sync = True, waitForSettling = False)
17-03-17 23:00:53.018 -07 000000448 INF: Z Motor: Moving to -0.130506 mm, started at -0.130133 mm, distance = -0.37 um
17-03-17 23:00:53.028 -07 000000448 INF: FPGA: Xmit ZDACW 28509\n [Z Motor]
17-03-17 23:00:53.028 -07 000000429 INF: FPGA: Recv YRDPOS 141367
17-03-17 23:00:53.138 -07 000000462 INF: FPGA: Recv ZDACW
17-03-17 23:00:53.138 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 117 ms to get response, and 118 ms overall
17-03-17 23:00:53.138 -07 000000475 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:53.138 -07 000000475 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:53.138 -07 000000475 INF: Y Motor: Moving 1353 steps-33
17-03-17 23:00:53.138 -07 000000475 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:53.138 -07 000000448 INF: FPGA: 'ZDACW 28509' command took 0 ms to send, 0 ms to get response, and 118 ms overall
17-03-17 23:00:53.148 -07 000000448 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:53.148 -07 000000547 INF: FPGA: Recv ZDACR 28509
17-03-17 23:00:53.158 -07 000000448 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 23:00:53.158 -07 000000448 INF: Z Motor: MoveAbsStepped took 130 ms (did NOT wait for settling yet))
17-03-17 23:00:53.208 -07 000000482 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 377 ms.
17-03-17 23:00:53.208 -07 000000482 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-17 23:00:53.208 -07 000000482 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:53.208 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 23:00:53.208 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 23:00:53.208 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:53.218 -07 000000482 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:53.218 -07 000000482 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-17 23:00:53.218 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:53.228 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-17 23:00:53.518 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-17 23:00:53.518 -07 000000475 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 379 ms to get response, and 381 ms overall
17-03-17 23:00:53.558 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:53.568 -07 000000547 INF: FPGA: Recv YRDPOS 143079
17-03-17 23:00:53.578 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:53.578 -07 000000475 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:53.578 -07 000000475 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-17 23:00:53.578 -07 000000475 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.846 mm, average velocity = 2.220 mm/sec
17-03-17 23:00:54.528 -07 000000475 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:54.528 -07 000000502 INF: FPGA: Recv YRDPOS 143079
17-03-17 23:00:54.538 -07 000000475 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.538 -07 000000475 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:54.558 -07 000000475 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:54.558 -07 000000475 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:54.558 -07 000000475 INF: Y Motor: Moved to 69.8628 after 1536 ms (table move)
17-03-17 23:00:54.558 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130506 mm (DAC = 28509)
17-03-17 23:00:54.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.568 -07 000000478 INF: FPGA: Recv ZSGSRD 29602
17-03-17 23:00:54.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-17 23:00:54.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.568 -07 000000551 INF: FPGA: Recv ZSGSRD 29605
17-03-17 23:00:54.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:54.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.578 -07 000000593 INF: FPGA: Recv ZSGSRD 29609
17-03-17 23:00:54.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.588 -07 000000502 INF: FPGA: Recv ZSGSRD 29607
17-03-17 23:00:54.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.598 -07 000000448 INF: FPGA: Recv ZSGSRD 29600
17-03-17 23:00:54.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.608 -07 000000501 INF: FPGA: Recv ZSGSRD 29603
17-03-17 23:00:54.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.618 -07 000000623 INF: FPGA: Recv ZSGSRD 29603
17-03-17 23:00:54.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.628 -07 000000415 INF: FPGA: Recv ZSGSRD 29608
17-03-17 23:00:54.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.638 -07 000000547 INF: FPGA: Recv ZSGSRD 29611
17-03-17 23:00:54.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.648 -07 000000478 INF: FPGA: Recv ZSGSRD 29600
17-03-17 23:00:54.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.658 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:54.658 -07 000000576 INF: FPGA: Recv ZPIEZORD 25294
17-03-17 23:00:54.668 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:00:54.668 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.350 V. Piezo Error = -9.5 V.
17-03-17 23:00:54.668 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29605 (-129.7 uncal um), Error = 0.8 uncal um, Median = 29604 (-129.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29600 (-129.7 uncal um), Max = 29611 (-129.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:00:54.668 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29605, posNoise = 6, negNoise = 5
17-03-17 23:00:54.668 -07 000000610 INF: Z Motor: After move to -0.130506, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:54.668 -07 000000610 INF: Z Motor: Settle wait time = 1538 ms, measure time = 103 ms (allowed 150 ms), total time = 1641 ms
17-03-17 23:00:54.668 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:54.718 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1693 ms
17-03-17 23:00:54.718 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:54.718 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.130512152467968. ----------
17-03-17 23:00:54.718 -07 000000610 INF: Cycle	70	Tile	13	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:54.718 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28332, sync = True, waitForSettling = True)
17-03-17 23:00:54.718 -07 000000610 INF: Z Motor: Moving to -0.129696 mm, started at -0.130512 mm, distance = 0.82 um
17-03-17 23:00:54.718 -07 000000610 INF: FPGA: Xmit ZDACW 28332\n [Z Motor]
17-03-17 23:00:54.718 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 23:00:54.728 -07 000000610 INF: FPGA: 'ZDACW 28332' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:54.728 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:54.728 -07 000000593 INF: FPGA: Recv ZDACR 28332
17-03-17 23:00:54.738 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.738 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:54.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.888 -07 000000623 INF: FPGA: Recv ZSGSRD 29477
17-03-17 23:00:54.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:54.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.898 -07 000000541 INF: FPGA: Recv ZSGSRD 29479
17-03-17 23:00:54.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.908 -07 000000475 INF: FPGA: Recv ZSGSRD 29482
17-03-17 23:00:54.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.918 -07 000000551 INF: FPGA: Recv ZSGSRD 29477
17-03-17 23:00:54.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.928 -07 000000561 INF: FPGA: Recv ZSGSRD 29475
17-03-17 23:00:54.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.938 -07 000000551 INF: FPGA: Recv ZSGSRD 29478
17-03-17 23:00:54.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.948 -07 000000561 INF: FPGA: Recv ZSGSRD 29479
17-03-17 23:00:54.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.958 -07 000000415 INF: FPGA: Recv ZSGSRD 29483
17-03-17 23:00:54.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.968 -07 000000429 INF: FPGA: Recv ZSGSRD 29475
17-03-17 23:00:54.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:54.978 -07 000000501 INF: FPGA: Recv ZSGSRD 29477
17-03-17 23:00:54.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.988 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:54.988 -07 000000627 INF: FPGA: Recv ZPIEZORD 25066
17-03-17 23:00:54.998 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:54.998 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.323 V. Piezo Error = -9.7 V.
17-03-17 23:00:54.998 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29478 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29478 (-128.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29475 (-128.9 uncal um), Max = 29483 (-129.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-17 23:00:54.998 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29478, posNoise = 5, negNoise = 3
17-03-17 23:00:54.998 -07 000000610 INF: Z Motor: After move to -0.129696, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:54.998 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-17 23:00:54.998 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:54.998 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:54.998 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:54.998 -07 000000486 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:54.998 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:54.998 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:54.998 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:54.998 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:54.998 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:54.998 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:54.998 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:54.998 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:55.008 -07 000000482 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:00:55.008 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:55.008 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-17 23:00:55.008 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:55.018 -07 000000482 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-17 23:00:55.018 -07 000000482 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 23:00:55.018 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-17 23:00:55.018 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 23:00:55.018 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28509 150\n [Camera]
17-03-17 23:00:55.218 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:00:55.688 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:55.688 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:55.688 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:55.688 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:55.688 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:55.688 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:55.698 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:55.698 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 23:00:55.698 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:55.698 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 23:00:55.778 -07 000000551 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.020806,
17-03-17 23:00:55.878 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28509 849
17-03-17 23:00:56.028 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:00:56.068 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 373 ms.
17-03-17 23:00:56.068 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-17 23:00:56.068 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:56.068 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 371 ms.
17-03-17 23:00:56.068 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 23:00:56.068 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:56.068 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:56.068 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 23:00:56.078 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:56.078 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-17 23:00:56.248 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:56.248 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:56.258 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:56.258 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:56.258 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:56.258 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:56.258 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:56.258 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 23:00:56.258 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:56.258 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 23:00:56.448 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:00:56.448 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:56.448 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28509 150' command took 2 ms to send, 1410 ms to get response, and 1421 ms overall
17-03-17 23:00:56.448 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.130071
17-03-17 23:00:56.448 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.13007 mm
17-03-17 23:00:56.448 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:56.448 -07 000000415 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-17 23:00:56.448 -07 000000415 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-17 23:00:56.448 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:56.448 -07 000000593 INF: Z Motor: Entering MoveAbsStepped (DAC = 28414, sync = True, waitForSettling = False)
17-03-17 23:00:56.448 -07 000000593 INF: Z Motor: Moving to -0.130071 mm, started at -0.129696 mm, distance = -0.37 um
17-03-17 23:00:56.458 -07 000000593 INF: FPGA: Xmit ZDACW 28414\n [Z Motor]
17-03-17 23:00:56.458 -07 000000561 INF: FPGA: Recv YRDPOS 143079
17-03-17 23:00:56.458 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-17 23:00:56.458 -07 000000415 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:56.458 -07 000000415 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:56.458 -07 000000415 INF: Y Motor: Moving 1344 steps-20
17-03-17 23:00:56.458 -07 000000448 INF: FPGA: Recv ZDACW
17-03-17 23:00:56.468 -07 000000593 INF: FPGA: 'ZDACW 28414' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 23:00:56.468 -07 000000415 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:56.478 -07 000000593 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:56.478 -07 000000486 INF: FPGA: Recv ZDACR 28414
17-03-17 23:00:56.488 -07 000000593 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:00:56.488 -07 000000593 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-17 23:00:56.638 -07 000000623 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 23:00:56.638 -07 000000623 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 23:00:56.638 -07 000000623 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:56.648 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 386 ms.
17-03-17 23:00:56.648 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 23:00:56.648 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:56.648 -07 000000623 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:56.648 -07 000000623 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-17 23:00:56.648 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-17 23:00:56.658 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-17 23:00:56.838 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-17 23:00:56.838 -07 000000415 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-17 23:00:56.888 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:56.888 -07 000000448 INF: FPGA: Recv YRDPOS 144769
17-03-17 23:00:56.898 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:56.898 -07 000000415 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:56.898 -07 000000415 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 23:00:56.898 -07 000000415 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.840 mm, average velocity = 2.170 mm/sec
17-03-17 23:00:57.028 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:00:57.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:00:57.848 -07 000000415 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:57.848 -07 000000475 INF: FPGA: Recv YRDPOS 144769
17-03-17 23:00:57.858 -07 000000415 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:57.858 -07 000000415 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:57.878 -07 000000415 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:00:57.878 -07 000000415 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:00:57.878 -07 000000415 INF: Y Motor: Moved to 70.6880 after 1428 ms (table move)
17-03-17 23:00:57.878 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130071 mm (DAC = 28414)
17-03-17 23:00:57.878 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.888 -07 000000618 INF: FPGA: Recv ZSGSRD 29540
17-03-17 23:00:57.888 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-17 23:00:57.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.888 -07 000000409 INF: FPGA: Recv ZSGSRD 29535
17-03-17 23:00:57.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:00:57.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.898 -07 000000478 INF: FPGA: Recv ZSGSRD 29537
17-03-17 23:00:57.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.908 -07 000000462 INF: FPGA: Recv ZSGSRD 29539
17-03-17 23:00:57.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.918 -07 000000627 INF: FPGA: Recv ZSGSRD 29535
17-03-17 23:00:57.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.928 -07 000000547 INF: FPGA: Recv ZSGSRD 29537
17-03-17 23:00:57.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.938 -07 000000627 INF: FPGA: Recv ZSGSRD 29536
17-03-17 23:00:57.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.948 -07 000000462 INF: FPGA: Recv ZSGSRD 29541
17-03-17 23:00:57.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.958 -07 000000482 INF: FPGA: Recv ZSGSRD 29538
17-03-17 23:00:57.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:57.968 -07 000000623 INF: FPGA: Recv ZSGSRD 29536
17-03-17 23:00:57.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.978 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:57.978 -07 000000561 INF: FPGA: Recv ZPIEZORD 25169
17-03-17 23:00:57.988 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:57.988 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.336 V. Piezo Error = -9.6 V.
17-03-17 23:00:57.988 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.1 um, Read 10 ADC samples: Avg = 29537 (-129.3 uncal um), Error = 0.8 uncal um, Median = 29537 (-129.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29535 (-129.3 uncal um), Max = 29541 (-129.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um)
17-03-17 23:00:57.988 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29537, posNoise = 4, negNoise = 2
17-03-17 23:00:57.988 -07 000000610 INF: Z Motor: After move to -0.130071, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:57.988 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 102 ms (allowed 150 ms), total time = 1532 ms
17-03-17 23:00:57.988 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 23:00:58.038 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1585 ms
17-03-17 23:00:58.038 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:00:58.038 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.130075306042328. ----------
17-03-17 23:00:58.038 -07 000000610 INF: Cycle	70	Tile	14	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:00:58.038 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28237, sync = True, waitForSettling = True)
17-03-17 23:00:58.038 -07 000000610 INF: Z Motor: Moving to -0.129261 mm, started at -0.130075 mm, distance = 0.81 um
17-03-17 23:00:58.038 -07 000000610 INF: FPGA: Xmit ZDACW 28237\n [Z Motor]
17-03-17 23:00:58.038 -07 000000593 INF: FPGA: Recv ZDACW
17-03-17 23:00:58.048 -07 000000610 INF: FPGA: 'ZDACW 28237' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:00:58.048 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:58.048 -07 000000448 INF: FPGA: Recv ZDACR 28237
17-03-17 23:00:58.058 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.058 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:00:58.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.208 -07 000000475 INF: FPGA: Recv ZSGSRD 29410
17-03-17 23:00:58.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:00:58.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.218 -07 000000593 INF: FPGA: Recv ZSGSRD 29413
17-03-17 23:00:58.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.228 -07 000000502 INF: FPGA: Recv ZSGSRD 29413
17-03-17 23:00:58.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.238 -07 000000409 INF: FPGA: Recv ZSGSRD 29410
17-03-17 23:00:58.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.248 -07 000000501 INF: FPGA: Recv ZSGSRD 29409
17-03-17 23:00:58.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.258 -07 000000382 INF: FPGA: Recv ZSGSRD 29409
17-03-17 23:00:58.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.268 -07 000000541 INF: FPGA: Recv ZSGSRD 29406
17-03-17 23:00:58.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.278 -07 000000448 INF: FPGA: Recv ZSGSRD 29409
17-03-17 23:00:58.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.288 -07 000000409 INF: FPGA: Recv ZSGSRD 29413
17-03-17 23:00:58.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:00:58.298 -07 000000561 INF: FPGA: Recv ZSGSRD 29411
17-03-17 23:00:58.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.308 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:00:58.308 -07 000000576 INF: FPGA: Recv ZPIEZORD 25007
17-03-17 23:00:58.318 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:58.318 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.309 V. Piezo Error = -9.7 V.
17-03-17 23:00:58.318 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29410 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29410 (-128.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29406 (-128.5 uncal um), Max = 29413 (-128.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 23:00:58.318 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29410, posNoise = 3, negNoise = 4
17-03-17 23:00:58.318 -07 000000610 INF: Z Motor: After move to -0.129261, error = 0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:00:58.318 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 23:00:58.318 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:00:58.318 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:00:58.318 -07 000000448 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:00:58.318 -07 000000382 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:00:58.318 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:00:58.318 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:00:58.318 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:00:58.318 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:00:58.318 -07 000000429 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:00:58.318 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:00:58.318 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:00:58.318 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:00:58.318 -07 000000429 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:00:58.318 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:00:58.328 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:00:58.328 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:00:58.338 -07 000000429 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-17 23:00:58.338 -07 000000429 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 23:00:58.338 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-17 23:00:58.338 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-17 23:00:58.338 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28414 150\n [Camera]
17-03-17 23:00:58.548 -07 000000486 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-17 23:00:59.008 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:00:59.008 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:00:59.008 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:59.008 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:59.008 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-17 23:00:59.008 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:00:59.008 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:00:59.008 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:59.008 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:59.008 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 23:00:59.198 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28414 849
17-03-17 23:00:59.348 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 1000
17-03-17 23:00:59.388 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 23:00:59.388 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 23:00:59.388 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:59.388 -07 000000415 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 375 ms.
17-03-17 23:00:59.388 -07 000000415 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-17 23:00:59.388 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:59.388 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:59.388 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-17 23:00:59.388 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:59.398 -07 000000415 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 23:00:59.578 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:00:59.578 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:00:59.578 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:00:59.578 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:00:59.578 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-17 23:00:59.578 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:00:59.578 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:00:59.578 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:00:59.578 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:00:59.578 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-17 23:00:59.768 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 23:00:59.768 -07 000000486 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:00:59.768 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28414 150' command took 2 ms to send, 1412 ms to get response, and 1423 ms overall
17-03-17 23:00:59.768 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:00:59.768 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68798828125, Z-Position -0.129259431100325. ------
17-03-17 23:00:59.768 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:00:59.768 -07 000000623 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13548 mm
17-03-17 23:00:59.768 -07 000000623 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:00:59.778 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:00:59.778 -07 000000409 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-17 23:00:59.778 -07 000000409 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-17 23:00:59.778 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:00:59.778 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:00:59.778 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 29595, sync = True, waitForSettling = False)
17-03-17 23:00:59.778 -07 000000618 INF: Z Motor: Moving to -0.135477 mm, started at -0.129259 mm, distance = -6.22 um
17-03-17 23:00:59.778 -07 000000541 INF: FPGA: Recv YRDPOS 144769
17-03-17 23:00:59.788 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:00:59.788 -07 000000618 INF: FPGA: Xmit ZDACW 29595\n [Z Motor]
17-03-17 23:00:59.788 -07 000000409 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:00:59.788 -07 000000409 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:00:59.788 -07 000000409 INF: Y Motor: Moving 1351 steps-30
17-03-17 23:00:59.788 -07 000000502 INF: FPGA: Recv ZDACW
17-03-17 23:00:59.798 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:00:59.798 -07 000000618 INF: FPGA: 'ZDACW 29595' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-17 23:00:59.808 -07 000000409 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:00:59.818 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:00:59.818 -07 000000486 INF: FPGA: Recv ZDACR 29595
17-03-17 23:00:59.828 -07 000000618 INF: FPGA: 'ZDACR' command took 2 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:00:59.828 -07 000000618 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-17 23:00:59.958 -07 000000415 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 23:00:59.958 -07 000000415 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 23:00:59.958 -07 000000415 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:59.958 -07 000000415 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:00:59.958 -07 000000415 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 23:00:59.958 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 384 ms.
17-03-17 23:00:59.958 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-17 23:00:59.958 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:00:59.968 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:00:59.978 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-17 23:00:59.998 -07 000000561 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:00:59.998 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-17 23:01:00.178 -07 000000448 INF: FPGA: Recv YMVTILE
17-03-17 23:01:00.178 -07 000000409 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:01:00.228 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:00.228 -07 000000462 INF: FPGA: Recv YRDPOS 146470
17-03-17 23:01:00.238 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:01:00.238 -07 000000409 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:00.238 -07 000000409 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-17 23:01:00.238 -07 000000409 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec
17-03-17 23:01:01.138 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.004458,
17-03-17 23:01:01.188 -07 000000409 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:01.188 -07 000000486 INF: FPGA: Recv YRDPOS 146470
17-03-17 23:01:01.198 -07 000000409 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:01.198 -07 000000409 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:01.218 -07 000000409 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:01:01.218 -07 000000409 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:01:01.218 -07 000000409 INF: Y Motor: Moved to 71.5186 after 1446 ms (table move)
17-03-17 23:01:01.228 -07 000000623 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135477 mm (DAC = 29595)
17-03-17 23:01:01.228 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.228 -07 000000429 INF: FPGA: Recv ZSGSRD 30377
17-03-17 23:01:01.238 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.238 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.238 -07 000000501 INF: FPGA: Recv ZSGSRD 30383
17-03-17 23:01:01.248 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.248 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.248 -07 000000576 INF: FPGA: Recv ZSGSRD 30375
17-03-17 23:01:01.258 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.278 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.278 -07 000000593 INF: FPGA: Recv ZSGSRD 30377
17-03-17 23:01:01.288 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:01:01.288 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.288 -07 000000415 INF: FPGA: Recv ZSGSRD 30376
17-03-17 23:01:01.298 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.298 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.298 -07 000000486 INF: FPGA: Recv ZSGSRD 30375
17-03-17 23:01:01.308 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.308 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.308 -07 000000501 INF: FPGA: Recv ZSGSRD 30382
17-03-17 23:01:01.318 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.318 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.318 -07 000000409 INF: FPGA: Recv ZSGSRD 30383
17-03-17 23:01:01.328 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.328 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.328 -07 000000475 INF: FPGA: Recv ZSGSRD 30384
17-03-17 23:01:01.338 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.338 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:01.338 -07 000000502 INF: FPGA: Recv ZSGSRD 30386
17-03-17 23:01:01.348 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.348 -07 000000623 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:01.348 -07 000000462 INF: FPGA: Recv ZPIEZORD 26290
17-03-17 23:01:01.358 -07 000000623 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:01.358 -07 000000623 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.516 V. Piezo Error = -9.0 V.
17-03-17 23:01:01.358 -07 000000623 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.5 um, Read 10 ADC samples: Avg = 30380 (-134.7 uncal um), Error = 0.8 uncal um, Median = 30380 (-134.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30375 (-134.7 uncal um), Max = 30386 (-134.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:01:01.358 -07 000000623 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30380, posNoise = 6, negNoise = 5
17-03-17 23:01:01.358 -07 000000623 INF: Z Motor: After move to -0.135477, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:01.358 -07 000000623 INF: Z Motor: Settle wait time = 1449 ms, measure time = 129 ms (allowed 150 ms), total time = 1578 ms
17-03-17 23:01:01.358 -07 000000623 INF: Z Motor: Waiting extra 21 ms after reading position to reach expected total of 150 ms
17-03-17 23:01:01.388 -07 000000623 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms
17-03-17 23:01:01.388 -07 000000623 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:01:01.388 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:01.388 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:01.388 -07 000000409 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:01.388 -07 000000482 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:01.388 -07 000000415 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:01:01.388 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:01.388 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:01:01.388 -07 000000415 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:01:01.398 -07 000000415 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:01:01.398 -07 000000415 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:01:01.408 -07 000000415 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-17 23:01:01.408 -07 000000415 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-17 23:01:01.408 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:01:01.458 -07 000000551 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:01:01.658 -07 000000448 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:01:01.658 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:01:01.658 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:01:01.658 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-17 23:01:01.698 -07 000000541 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:01:01.698 -07 000000382 INF: FPGA: Recv CAMSNAP
17-03-17 23:01:01.698 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 281 ms to get response, and 284 ms overall
17-03-17 23:01:01.788 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 127 ms.
17-03-17 23:01:01.788 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:01.788 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:01:01.788 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-17 23:01:01.798 -07 000000429 INF: Autofocus start
17-03-17 23:01:01.798 -07 000000429 INF: MeasureProfile start
17-03-17 23:01:01.798 -07 000000475 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:01.798 -07 000000382 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:01.808 -07 000000475 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:01:01.808 -07 000000475 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:01:01.808 -07 000000429 INF: MeasureProfile done
17-03-17 23:01:01.808 -07 000000429 INF: X=128  Z correction [um]=0.5917814
17-03-17 23:01:01.808 -07 000000429 INF: Autofocus finished
17-03-17 23:01:02.008 -07 000000551 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:01:02.008 -07 000000475 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:01:02.008 -07 000000610 INF: Suspending Skipping AutoFocus for the next 6 cycles.
17-03-17 23:01:02.008 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.135490916877833. ----------
17-03-17 23:01:02.008 -07 000000610 INF: Cycle	70	Tile	15	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:01:02.018 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28237, sync = True, waitForSettling = True)
17-03-17 23:01:02.018 -07 000000610 INF: Z Motor: Moving to -0.129261 mm, started at -0.135491 mm, distance = 6.23 um
17-03-17 23:01:02.018 -07 000000610 INF: FPGA: Xmit ZDACW 28237\n [Z Motor]
17-03-17 23:01:02.018 -07 000000478 INF: FPGA: Recv ZDACW
17-03-17 23:01:02.028 -07 000000610 INF: FPGA: 'ZDACW 28237' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-17 23:01:02.028 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:02.028 -07 000000448 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:01:02.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:01:02.028 -07 000000618 INF: FPGA: Recv ZDACR 28237
17-03-17 23:01:02.038 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.038 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:01:02.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.188 -07 000000382 INF: FPGA: Recv ZSGSRD 29411
17-03-17 23:01:02.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:02.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.198 -07 000000618 INF: FPGA: Recv ZSGSRD 29411
17-03-17 23:01:02.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.208 -07 000000382 INF: FPGA: Recv ZSGSRD 29411
17-03-17 23:01:02.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.218 -07 000000475 INF: FPGA: Recv ZSGSRD 29407
17-03-17 23:01:02.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.228 -07 000000486 INF: FPGA: Recv ZSGSRD 29417
17-03-17 23:01:02.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.238 -07 000000547 INF: FPGA: Recv ZSGSRD 29413
17-03-17 23:01:02.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.248 -07 000000429 INF: FPGA: Recv ZSGSRD 29409
17-03-17 23:01:02.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.258 -07 000000478 INF: FPGA: Recv ZSGSRD 29418
17-03-17 23:01:02.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.268 -07 000000475 INF: FPGA: Recv ZSGSRD 29412
17-03-17 23:01:02.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:02.278 -07 000000382 INF: FPGA: Recv ZSGSRD 29414
17-03-17 23:01:02.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.288 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:02.288 -07 000000409 INF: FPGA: Recv ZPIEZORD 25042
17-03-17 23:01:02.298 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:02.298 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.309 V. Piezo Error = -9.6 V.
17-03-17 23:01:02.298 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29412 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29412 (-128.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29407 (-128.5 uncal um), Max = 29418 (-128.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:01:02.298 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29412, posNoise = 6, negNoise = 5
17-03-17 23:01:02.298 -07 000000610 INF: Z Motor: After move to -0.129261, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:02.298 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 23:01:02.298 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:02.298 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:02.298 -07 000000541 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:02.298 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:01:02.298 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:02.298 -07 000000482 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:02.298 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:01:02.298 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:01:02.298 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:01:02.298 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:01:02.298 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:01:02.298 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:01:02.308 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:01:02.308 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:01:02.308 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:01:02.308 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:01:02.318 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-17 23:01:02.318 -07 000000415 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-17 23:01:02.318 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-17 23:01:02.318 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-17 23:01:02.328 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28414 150\n [Camera]
17-03-17 23:01:02.528 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:01:02.988 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:01:02.988 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:01:02.988 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:02.988 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:02.988 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-17 23:01:02.988 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:01:02.988 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:01:02.988 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:02.988 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:02.988 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-17 23:01:03.178 -07 000000482 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28414 849
17-03-17 23:01:03.328 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:01:03.368 -07 000000382 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 376 ms.
17-03-17 23:01:03.368 -07 000000382 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-17 23:01:03.368 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:03.368 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 376 ms.
17-03-17 23:01:03.368 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-17 23:01:03.368 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:03.368 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:03.368 -07 000000382 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 23:01:03.368 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:03.378 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-17 23:01:03.558 -07 000000475 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:01:03.558 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:01:03.558 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:03.558 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:03.558 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) start.
17-03-17 23:01:03.558 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:01:03.558 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:01:03.558 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:03.558 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:03.558 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) start.
17-03-17 23:01:03.748 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:01:03.748 -07 000000448 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:01:03.748 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28414 150' command took 2 ms to send, 1412 ms to get response, and 1422 ms overall
17-03-17 23:01:03.748 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:01:03.748 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.5185546875, Z-Position -0.129272279524608. ------
17-03-17 23:01:03.758 -07 000000547 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:03.758 -07 000000475 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13562 mm
17-03-17 23:01:03.758 -07 000000475 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:01:03.758 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:03.758 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-17 23:01:03.758 -07 000000501 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm
17-03-17 23:01:03.758 -07 000000627 INF: Z Motor: Entering MoveAbsStepped (DAC = 29626, sync = True, waitForSettling = False)
17-03-17 23:01:03.758 -07 000000627 INF: Z Motor: Moving to -0.135619 mm, started at -0.129272 mm, distance = -6.35 um
17-03-17 23:01:03.768 -07 000000547 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:03.768 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:03.768 -07 000000448 INF: FPGA: Recv YRDPOS 146470
17-03-17 23:01:03.778 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 23:01:03.778 -07 000000501 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:03.778 -07 000000501 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:01:03.778 -07 000000501 INF: Y Motor: Moving 1350 steps-29
17-03-17 23:01:03.778 -07 000000627 INF: FPGA: Xmit ZDACW 29626\n [Z Motor]
17-03-17 23:01:03.778 -07 000000478 INF: FPGA: Recv ZDACW
17-03-17 23:01:03.788 -07 000000547 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:01:03.788 -07 000000627 INF: FPGA: 'ZDACW 29626' command took 1 ms to send, 0 ms to get response, and 20 ms overall
17-03-17 23:01:03.798 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:01:03.808 -07 000000627 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:03.808 -07 000000482 INF: FPGA: Recv ZDACR 29626
17-03-17 23:01:03.818 -07 000000627 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:01:03.818 -07 000000627 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-17 23:01:03.938 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2415923248, 0x0, 418435064) end. Duration was 380 ms.
17-03-17 23:01:03.938 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-17 23:01:03.938 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:03.938 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:03.938 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2352550048, 0x0, 391868352) end. Duration was 386 ms.
17-03-17 23:01:03.938 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-17 23:01:03.938 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:03.948 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-17 23:01:03.948 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-17 23:01:03.948 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-17 23:01:03.988 -07 000000478 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:01:03.988 -07 000000547 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 23:01:04.168 -07 000000415 INF: FPGA: Recv YMVTILE
17-03-17 23:01:04.168 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:01:04.218 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:04.218 -07 000000478 INF: FPGA: Recv YRDPOS 148171
17-03-17 23:01:04.228 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:04.228 -07 000000501 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:04.228 -07 000000501 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-17 23:01:04.228 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.126 mm/sec
17-03-17 23:01:05.178 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:05.178 -07 000000502 INF: FPGA: Recv YRDPOS 148172
17-03-17 23:01:05.188 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:05.188 -07 000000501 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:05.208 -07 000000501 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:01:05.208 -07 000000501 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 1 counts (0.000 mm)
17-03-17 23:01:05.208 -07 000000501 INF: Y Motor: Moved to 72.3496 after 1446 ms (table move)
17-03-17 23:01:05.208 -07 000000475 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135619 mm (DAC = 29626)
17-03-17 23:01:05.208 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.218 -07 000000541 INF: FPGA: Recv ZSGSRD 30410
17-03-17 23:01:05.218 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 23:01:05.218 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.218 -07 000000547 INF: FPGA: Recv ZSGSRD 30403
17-03-17 23:01:05.228 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:01:05.228 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.228 -07 000000462 INF: FPGA: Recv ZSGSRD 30406
17-03-17 23:01:05.238 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.238 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.238 -07 000000576 INF: FPGA: Recv ZSGSRD 30401
17-03-17 23:01:05.248 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.248 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.248 -07 000000501 INF: FPGA: Recv ZSGSRD 30401
17-03-17 23:01:05.258 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.258 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.258 -07 000000541 INF: FPGA: Recv ZSGSRD 30403
17-03-17 23:01:05.268 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.268 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.268 -07 000000486 INF: FPGA: Recv ZSGSRD 30402
17-03-17 23:01:05.278 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:05.278 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.278 -07 000000462 INF: FPGA: Recv ZSGSRD 30396
17-03-17 23:01:05.288 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.288 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.288 -07 000000576 INF: FPGA: Recv ZSGSRD 30402
17-03-17 23:01:05.298 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.298 -07 000000475 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:05.298 -07 000000618 INF: FPGA: Recv ZSGSRD 30404
17-03-17 23:01:05.308 -07 000000475 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.308 -07 000000475 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:05.308 -07 000000409 INF: FPGA: Recv ZPIEZORD 26349
17-03-17 23:01:05.318 -07 000000475 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:05.318 -07 000000475 INF: Z Motor: Piezo is near 36.3 V (nominally 0 to 100 V), expect near 45.2 V, since DAC is at 4.521 V. Piezo Error = -8.9 V.
17-03-17 23:01:05.318 -07 000000475 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.6 um, Read 10 ADC samples: Avg = 30403 (-134.8 uncal um), Error = 0.8 uncal um, Median = 30402 (-134.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30396 (-134.8 uncal um), Max = 30410 (-134.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-17 23:01:05.318 -07 000000475 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30403, posNoise = 7, negNoise = 7
17-03-17 23:01:05.318 -07 000000475 INF: Z Motor: After move to -0.135619, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:05.318 -07 000000475 INF: Z Motor: Settle wait time = 1449 ms, measure time = 101 ms (allowed 150 ms), total time = 1550 ms
17-03-17 23:01:05.318 -07 000000475 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-17 23:01:05.368 -07 000000475 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms
17-03-17 23:01:05.368 -07 000000475 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:01:05.368 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:05.368 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:05.368 -07 000000627 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:05.368 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:05.368 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:01:05.368 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:05.368 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:01:05.368 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:01:05.378 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:01:05.378 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:01:05.388 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-17 23:01:05.388 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-17 23:01:05.388 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:01:05.438 -07 000000547 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:01:05.638 -07 000000448 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:01:05.638 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:01:05.638 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:01:05.768 -07 000000623 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:01:05.768 -07 000000623 INF: FPGA: Recv CAMSNAP
17-03-17 23:01:05.768 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 373 ms to get response, and 375 ms overall
17-03-17 23:01:05.768 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) start.
17-03-17 23:01:05.878 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2270629648, 0x0, 559484976) end. Duration was 115 ms.
17-03-17 23:01:05.878 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:05.888 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:01:05.888 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 247 ms.
17-03-17 23:01:05.968 -07 000000502 INF: Autofocus start
17-03-17 23:01:05.968 -07 000000502 INF: MeasureProfile start
17-03-17 23:01:05.968 -07 000000551 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:05.968 -07 000000593 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:05.978 -07 000000551 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:01:05.978 -07 000000551 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:01:05.978 -07 000000502 INF: MeasureProfile done
17-03-17 23:01:05.978 -07 000000502 INF: X=-16  Z correction [um]=-0.08128808
17-03-17 23:01:05.978 -07 000000502 INF: Autofocus finished
17-03-17 23:01:06.178 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:01:06.178 -07 000000551 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 198 ms to get response, and 208 ms overall
17-03-17 23:01:06.188 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.135638673757093. ----------
17-03-17 23:01:06.188 -07 000000610 INF: Cycle	70	Tile	16	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:01:06.188 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28121, sync = True, waitForSettling = True)
17-03-17 23:01:06.188 -07 000000610 INF: Z Motor: Moving to -0.128730 mm, started at -0.135639 mm, distance = 6.91 um
17-03-17 23:01:06.188 -07 000000610 INF: FPGA: Xmit ZDACW 28121\n [Z Motor]
17-03-17 23:01:06.188 -07 000000618 INF: FPGA: Recv ZDACW
17-03-17 23:01:06.198 -07 000000610 INF: FPGA: 'ZDACW 28121' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:01:06.198 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:06.198 -07 000000448 INF: FPGA: Recv ZDACR 28121
17-03-17 23:01:06.208 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.208 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:01:06.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.358 -07 000000415 INF: FPGA: Recv ZSGSRD 29329
17-03-17 23:01:06.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:06.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.368 -07 000000551 INF: FPGA: Recv ZSGSRD 29330
17-03-17 23:01:06.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.378 -07 000000576 INF: FPGA: Recv ZSGSRD 29325
17-03-17 23:01:06.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.388 -07 000000561 INF: FPGA: Recv ZSGSRD 29324
17-03-17 23:01:06.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.398 -07 000000593 INF: FPGA: Recv ZSGSRD 29331
17-03-17 23:01:06.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.408 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.408 -07 000000623 INF: FPGA: Recv ZSGSRD 29326
17-03-17 23:01:06.418 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.418 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.418 -07 000000627 INF: FPGA: Recv ZSGSRD 29334
17-03-17 23:01:06.428 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.428 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.428 -07 000000382 INF: FPGA: Recv ZSGSRD 29331
17-03-17 23:01:06.438 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.438 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.438 -07 000000547 INF: FPGA: Recv ZSGSRD 29328
17-03-17 23:01:06.448 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.448 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:06.448 -07 000000593 INF: FPGA: Recv ZSGSRD 29328
17-03-17 23:01:06.458 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.458 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:06.458 -07 000000576 INF: FPGA: Recv ZPIEZORD 24938
17-03-17 23:01:06.468 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:06.468 -07 000000610 INF: Z Motor: Piezo is near 33.3 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.291 V. Piezo Error = -9.6 V.
17-03-17 23:01:06.468 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.7 um, Read 10 ADC samples: Avg = 29329 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29328 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29324 (-127.9 uncal um), Max = 29334 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:01:06.468 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29329, posNoise = 5, negNoise = 5
17-03-17 23:01:06.468 -07 000000610 INF: Z Motor: After move to -0.128730, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:06.468 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-17 23:01:06.468 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:06.468 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:06.468 -07 000000415 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:06.468 -07 000000593 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:06.468 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:01:06.468 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:01:06.468 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:01:06.468 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:06.468 -07 000000627 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:01:06.468 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:01:06.468 -07 000000475 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:01:06.468 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:01:06.468 -07 000000627 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:01:06.468 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:01:06.478 -07 000000475 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:01:06.478 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:01:06.488 -07 000000627 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 23:01:06.488 -07 000000627 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 23:01:06.488 -07 000000475 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-17 23:01:06.488 -07 000000475 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-17 23:01:06.498 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28298 150\n [Camera]
17-03-17 23:01:06.498 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.989471,
17-03-17 23:01:06.688 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:01:07.028 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:01:07.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:01:07.158 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:01:07.158 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:01:07.158 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:07.158 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:01:07.158 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:01:07.158 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:07.168 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:07.168 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 23:01:07.168 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:07.168 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) start.
17-03-17 23:01:07.358 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28298 852
17-03-17 23:01:07.498 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:01:07.558 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 385 ms.
17-03-17 23:01:07.558 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-17 23:01:07.558 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:07.558 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2164362856, 0x0, 418435064) end. Duration was 383 ms.
17-03-17 23:01:07.558 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-17 23:01:07.558 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:07.558 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:07.558 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-17 23:01:07.558 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:07.568 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-17 23:01:07.728 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:01:07.728 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:01:07.728 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:07.728 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:01:07.728 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:01:07.728 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:07.848 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:07.848 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) start.
17-03-17 23:01:07.848 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:07.848 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) start.
17-03-17 23:01:07.918 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:01:07.918 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:01:07.918 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28298 150' command took 2 ms to send, 1412 ms to get response, and 1424 ms overall
17-03-17 23:01:07.918 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:01:07.918 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.349609375, Z-Position -0.128739069916842. ------
17-03-17 23:01:07.918 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:07.918 -07 000000623 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13530 mm
17-03-17 23:01:07.918 -07 000000623 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:01:07.918 -07 000000486 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-17 23:01:07.918 -07 000000486 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-17 23:01:07.918 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 29557, sync = True, waitForSettling = False)
17-03-17 23:01:07.928 -07 000000618 INF: Z Motor: Moving to -0.135303 mm, started at -0.128739 mm, distance = -6.56 um
17-03-17 23:01:07.928 -07 000000593 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:07.928 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-17 23:01:07.928 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:07.928 -07 000000478 INF: FPGA: Recv YRDPOS 148172
17-03-17 23:01:07.938 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:07.938 -07 000000618 INF: FPGA: Xmit ZDACW 29557\n [Z Motor]
17-03-17 23:01:07.938 -07 000000486 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:07.938 -07 000000486 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:01:07.938 -07 000000486 INF: Y Motor: Moving 1349 steps-28
17-03-17 23:01:07.938 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 23:01:07.948 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:01:07.948 -07 000000618 INF: FPGA: 'ZDACW 29557' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-17 23:01:07.958 -07 000000486 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:01:07.968 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:07.968 -07 000000551 INF: FPGA: Recv ZDACR 29557
17-03-17 23:01:07.978 -07 000000618 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:01:07.978 -07 000000618 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-17 23:01:08.148 -07 000000501 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:01:08.148 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-17 23:01:08.238 -07 000000475 INF: Camera: sBCa_ReadImage(785074704, 2235207384, 0x0, 418435064) end. Duration was 396 ms.
17-03-17 23:01:08.238 -07 000000475 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-17 23:01:08.238 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:08.248 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2199785120, 0x0, 391868352) end. Duration was 396 ms.
17-03-17 23:01:08.248 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-17 23:01:08.248 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:08.248 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:08.248 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:08.248 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms.
17-03-17 23:01:08.258 -07 000000475 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 526 ms.
17-03-17 23:01:08.328 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-17 23:01:08.328 -07 000000486 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-17 23:01:08.368 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:08.378 -07 000000475 INF: FPGA: Recv YRDPOS 149864
17-03-17 23:01:08.378 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-17 23:01:08.378 -07 000000486 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:08.378 -07 000000486 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm)
17-03-17 23:01:08.378 -07 000000486 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.123 mm/sec
17-03-17 23:01:09.328 -07 000000486 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:09.328 -07 000000415 INF: FPGA: Recv YRDPOS 149864
17-03-17 23:01:09.338 -07 000000486 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:09.338 -07 000000486 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:09.358 -07 000000486 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:01:09.358 -07 000000486 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:01:09.358 -07 000000486 INF: Y Motor: Moved to 73.1758 after 1436 ms (table move)
17-03-17 23:01:09.358 -07 000000623 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135303 mm (DAC = 29557)
17-03-17 23:01:09.358 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.368 -07 000000409 INF: FPGA: Recv ZSGSRD 30354
17-03-17 23:01:09.368 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-17 23:01:09.368 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.368 -07 000000462 INF: FPGA: Recv ZSGSRD 30360
17-03-17 23:01:09.378 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:01:09.378 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.378 -07 000000561 INF: FPGA: Recv ZSGSRD 30350
17-03-17 23:01:09.388 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.388 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.388 -07 000000502 INF: FPGA: Recv ZSGSRD 30350
17-03-17 23:01:09.398 -07 000000623 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.398 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.398 -07 000000482 INF: FPGA: Recv ZSGSRD 30353
17-03-17 23:01:09.408 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.408 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.408 -07 000000382 INF: FPGA: Recv ZSGSRD 30355
17-03-17 23:01:09.418 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.418 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.418 -07 000000541 INF: FPGA: Recv ZSGSRD 30356
17-03-17 23:01:09.428 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.428 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.428 -07 000000429 INF: FPGA: Recv ZSGSRD 30352
17-03-17 23:01:09.438 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.438 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.438 -07 000000409 INF: FPGA: Recv ZSGSRD 30349
17-03-17 23:01:09.448 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.448 -07 000000623 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:09.448 -07 000000462 INF: FPGA: Recv ZSGSRD 30352
17-03-17 23:01:09.458 -07 000000623 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.458 -07 000000623 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:09.458 -07 000000561 INF: FPGA: Recv ZPIEZORD 26298
17-03-17 23:01:09.468 -07 000000623 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:09.468 -07 000000623 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.1 V, since DAC is at 4.510 V. Piezo Error = -8.9 V.
17-03-17 23:01:09.468 -07 000000623 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.3 um, Read 10 ADC samples: Avg = 30353 (-134.5 uncal um), Error = 0.8 uncal um, Median = 30352 (-134.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30349 (-134.5 uncal um), Max = 30360 (-134.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 23:01:09.468 -07 000000623 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30353, posNoise = 7, negNoise = 4
17-03-17 23:01:09.468 -07 000000623 INF: Z Motor: After move to -0.135303, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:09.468 -07 000000623 INF: Z Motor: Settle wait time = 1438 ms, measure time = 102 ms (allowed 150 ms), total time = 1540 ms
17-03-17 23:01:09.468 -07 000000623 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-17 23:01:09.518 -07 000000623 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-17 23:01:09.518 -07 000000623 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:01:09.518 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:09.518 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:09.518 -07 000000547 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:09.518 -07 000000429 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:09.518 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:01:09.518 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:09.518 -07 000000482 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 23:01:09.518 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:01:09.528 -07 000000482 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:01:09.528 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:01:09.538 -07 000000482 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 23:01:09.538 -07 000000482 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 23:01:09.538 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:01:09.578 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:01:09.778 -07 000000627 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:01:09.778 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:01:09.778 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:01:09.788 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2164362856, 0x0, 559484976) start.
17-03-17 23:01:09.818 -07 000000541 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:01:09.818 -07 000000409 INF: FPGA: Recv CAMSNAP
17-03-17 23:01:09.818 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 279 ms to get response, and 284 ms overall
17-03-17 23:01:09.898 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2164362856, 0x0, 559484976) end. Duration was 117 ms.
17-03-17 23:01:09.898 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:09.898 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:01:09.908 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 120 ms.
17-03-17 23:01:09.918 -07 000000551 INF: Autofocus start
17-03-17 23:01:09.918 -07 000000551 INF: MeasureProfile start
17-03-17 23:01:09.918 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:09.918 -07 000000627 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:09.928 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:01:09.928 -07 000000501 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:01:09.928 -07 000000551 INF: MeasureProfile done
17-03-17 23:01:09.928 -07 000000551 INF: X=16  Z correction [um]=0.0530179
17-03-17 23:01:09.928 -07 000000551 INF: Autofocus finished
17-03-17 23:01:10.128 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:01:10.128 -07 000000501 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:01:10.128 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.135317463150005. ----------
17-03-17 23:01:10.128 -07 000000610 INF: Cycle	70	Tile	17	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:01:10.138 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28082, sync = True, waitForSettling = True)
17-03-17 23:01:10.138 -07 000000610 INF: Z Motor: Moving to -0.128551 mm, started at -0.135317 mm, distance = 6.77 um
17-03-17 23:01:10.138 -07 000000610 INF: FPGA: Xmit ZDACW 28082\n [Z Motor]
17-03-17 23:01:10.138 -07 000000541 INF: FPGA: Recv ZDACW
17-03-17 23:01:10.148 -07 000000610 INF: FPGA: 'ZDACW 28082' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:01:10.148 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:10.148 -07 000000415 INF: FPGA: Recv ZDACR 28082
17-03-17 23:01:10.158 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.158 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:01:10.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.308 -07 000000551 INF: FPGA: Recv ZSGSRD 29302
17-03-17 23:01:10.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:10.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.318 -07 000000415 INF: FPGA: Recv ZSGSRD 29301
17-03-17 23:01:10.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.328 -07 000000551 INF: FPGA: Recv ZSGSRD 29303
17-03-17 23:01:10.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.338 -07 000000593 INF: FPGA: Recv ZSGSRD 29298
17-03-17 23:01:10.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.348 -07 000000623 INF: FPGA: Recv ZSGSRD 29306
17-03-17 23:01:10.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.358 -07 000000382 INF: FPGA: Recv ZSGSRD 29303
17-03-17 23:01:10.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.368 -07 000000561 INF: FPGA: Recv ZSGSRD 29302
17-03-17 23:01:10.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.378 -07 000000502 INF: FPGA: Recv ZSGSRD 29304
17-03-17 23:01:10.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.388 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.388 -07 000000429 INF: FPGA: Recv ZSGSRD 29301
17-03-17 23:01:10.398 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.398 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:10.398 -07 000000475 INF: FPGA: Recv ZSGSRD 29302
17-03-17 23:01:10.408 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.408 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:10.408 -07 000000382 INF: FPGA: Recv ZPIEZORD 24924
17-03-17 23:01:10.418 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:10.418 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.285 V. Piezo Error = -9.6 V.
17-03-17 23:01:10.418 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29302 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29302 (-127.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29298 (-127.8 uncal um), Max = 29306 (-127.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-17 23:01:10.418 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29302, posNoise = 4, negNoise = 4
17-03-17 23:01:10.418 -07 000000610 INF: Z Motor: After move to -0.128551, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:10.418 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 23:01:10.418 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:10.418 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:10.418 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:10.418 -07 000000478 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:10.418 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:01:10.418 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:10.418 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:01:10.418 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:01:10.418 -07 000000547 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:01:10.418 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:01:10.418 -07 000000541 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-17 23:01:10.418 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:01:10.428 -07 000000547 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:01:10.428 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:01:10.428 -07 000000541 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:01:10.428 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:01:10.438 -07 000000547 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-17 23:01:10.438 -07 000000547 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:01:10.438 -07 000000541 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-17 23:01:10.438 -07 000000541 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-17 23:01:10.438 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28258 150\n [Camera]
17-03-17 23:01:10.638 -07 000000593 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:01:11.098 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:01:11.098 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:01:11.098 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:11.098 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:11.098 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-17 23:01:11.108 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:01:11.108 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:01:11.108 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:11.108 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:11.108 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-17 23:01:11.298 -07 000000541 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28258 849
17-03-17 23:01:11.448 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:01:11.488 -07 000000409 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 383 ms.
17-03-17 23:01:11.488 -07 000000409 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 23:01:11.488 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:11.488 -07 000000593 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 381 ms.
17-03-17 23:01:11.488 -07 000000593 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-17 23:01:11.488 -07 000000593 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:11.488 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:11.488 -07 000000409 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 23:01:11.488 -07 000000593 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:11.498 -07 000000593 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-17 23:01:11.668 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:01:11.668 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:01:11.668 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:11.668 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:11.668 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-17 23:01:11.668 -07 000000627 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:01:11.668 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:01:11.668 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:11.668 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:11.668 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-17 23:01:11.858 -07 000000409 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:01:11.858 -07 000000415 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:01:11.858 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28258 150' command took 2 ms to send, 1417 ms to get response, and 1424 ms overall
17-03-17 23:01:11.858 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:01:11.858 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17578125, Z-Position -0.128565616189015. ------
17-03-17 23:01:11.868 -07 000000486 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 3.989471,
17-03-17 23:01:11.868 -07 000000561 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.13488 mm
17-03-17 23:01:11.868 -07 000000561 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:01:11.868 -07 000000478 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-17 23:01:11.868 -07 000000478 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-17 23:01:11.868 -07 000000551 INF: Z Motor: Entering MoveAbsStepped (DAC = 29465, sync = True, waitForSettling = False)
17-03-17 23:01:11.878 -07 000000551 INF: Z Motor: Moving to -0.134882 mm, started at -0.128566 mm, distance = -6.32 um
17-03-17 23:01:11.878 -07 000000482 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:11.878 -07 000000593 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:11.888 -07 000000482 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-17 23:01:11.888 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:11.888 -07 000000429 INF: FPGA: Recv YRDPOS 149864
17-03-17 23:01:11.898 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-17 23:01:11.898 -07 000000478 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:11.898 -07 000000478 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:01:11.898 -07 000000478 INF: Y Motor: Moving 1355 steps-34
17-03-17 23:01:11.908 -07 000000551 INF: FPGA: Xmit ZDACW 29465\n [Z Motor]
17-03-17 23:01:11.908 -07 000000409 INF: FPGA: Recv ZDACW
17-03-17 23:01:11.918 -07 000000482 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:01:11.918 -07 000000551 INF: FPGA: 'ZDACW 29465' command took 0 ms to send, 0 ms to get response, and 39 ms overall
17-03-17 23:01:11.928 -07 000000478 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:01:11.948 -07 000000551 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:11.948 -07 000000547 INF: FPGA: Recv ZDACR 29465
17-03-17 23:01:11.958 -07 000000551 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 39 ms overall
17-03-17 23:01:11.958 -07 000000551 INF: Z Motor: MoveAbsStepped took 79 ms (did NOT wait for settling yet))
17-03-17 23:01:12.028 -07 000000475 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:01:12.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:01:12.068 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 399 ms.
17-03-17 23:01:12.068 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-17 23:01:12.068 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:12.068 -07 000000448 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 397 ms.
17-03-17 23:01:12.068 -07 000000448 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-17 23:01:12.068 -07 000000448 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:12.068 -07 000000448 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:12.078 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 23:01:12.078 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-17 23:01:12.078 -07 000000448 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-17 23:01:12.118 -07 000000462 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:01:12.118 -07 000000482 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 232 ms overall
17-03-17 23:01:12.298 -07 000000475 INF: FPGA: Recv YMVTILE
17-03-17 23:01:12.298 -07 000000478 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 407 ms overall
17-03-17 23:01:12.338 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:12.338 -07 000000627 INF: FPGA: Recv YRDPOS 151568
17-03-17 23:01:12.348 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:01:12.348 -07 000000478 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:12.348 -07 000000478 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-17 23:01:12.348 -07 000000478 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 408 ms, distance = 0.847 mm, average velocity = 2.076 mm/sec
17-03-17 23:01:13.298 -07 000000478 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:13.298 -07 000000475 INF: FPGA: Recv YRDPOS 151568
17-03-17 23:01:13.308 -07 000000478 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:13.308 -07 000000478 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:13.318 -07 000000478 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:01:13.318 -07 000000478 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:01:13.318 -07 000000478 INF: Y Motor: Moved to 74.0078 after 1452 ms (table move)
17-03-17 23:01:13.328 -07 000000561 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134882 mm (DAC = 29465)
17-03-17 23:01:13.328 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.328 -07 000000415 INF: FPGA: Recv ZSGSRD 30287
17-03-17 23:01:13.338 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:01:13.338 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.338 -07 000000627 INF: FPGA: Recv ZSGSRD 30281
17-03-17 23:01:13.348 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.348 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.348 -07 000000623 INF: FPGA: Recv ZSGSRD 30290
17-03-17 23:01:13.358 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.358 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.358 -07 000000593 INF: FPGA: Recv ZSGSRD 30288
17-03-17 23:01:13.368 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.368 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.368 -07 000000462 INF: FPGA: Recv ZSGSRD 30282
17-03-17 23:01:13.378 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.378 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.378 -07 000000541 INF: FPGA: Recv ZSGSRD 30291
17-03-17 23:01:13.388 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.388 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.388 -07 000000627 INF: FPGA: Recv ZSGSRD 30281
17-03-17 23:01:13.398 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.398 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.398 -07 000000576 INF: FPGA: Recv ZSGSRD 30286
17-03-17 23:01:13.408 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.408 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.408 -07 000000482 INF: FPGA: Recv ZSGSRD 30283
17-03-17 23:01:13.418 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.418 -07 000000561 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:13.418 -07 000000462 INF: FPGA: Recv ZSGSRD 30289
17-03-17 23:01:13.428 -07 000000561 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.428 -07 000000561 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:13.428 -07 000000541 INF: FPGA: Recv ZPIEZORD 26220
17-03-17 23:01:13.438 -07 000000561 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:13.438 -07 000000561 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.496 V. Piezo Error = -8.9 V.
17-03-17 23:01:13.438 -07 000000561 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.9 um, Read 10 ADC samples: Avg = 30286 (-134.1 uncal um), Error = 0.8 uncal um, Median = 30286 (-134.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30281 (-134.1 uncal um), Max = 30291 (-134.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:01:13.438 -07 000000561 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30286, posNoise = 5, negNoise = 5
17-03-17 23:01:13.438 -07 000000561 INF: Z Motor: After move to -0.134882, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:13.438 -07 000000561 INF: Z Motor: Settle wait time = 1453 ms, measure time = 106 ms (allowed 150 ms), total time = 1559 ms
17-03-17 23:01:13.438 -07 000000561 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-17 23:01:13.488 -07 000000561 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1616 ms
17-03-17 23:01:13.488 -07 000000561 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:01:13.488 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:13.488 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:13.488 -07 000000547 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:13.488 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:01:13.488 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:13.488 -07 000000382 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:13.488 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:01:13.488 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:01:13.498 -07 000000501 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:01:13.498 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:01:13.508 -07 000000501 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-17 23:01:13.508 -07 000000501 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-17 23:01:13.508 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:01:13.558 -07 000000482 INF: FPGA: Recv @CAMSNAP turning led on 41
17-03-17 23:01:13.758 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 241
17-03-17 23:01:13.758 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 241
17-03-17 23:01:13.758 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:01:13.758 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2183444240, 0x0, 559484976) start.
17-03-17 23:01:13.788 -07 000000551 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:01:13.798 -07 000000618 INF: FPGA: Recv CAMSNAP
17-03-17 23:01:13.798 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 280 ms to get response, and 284 ms overall
17-03-17 23:01:13.868 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2183444240, 0x0, 559484976) end. Duration was 114 ms.
17-03-17 23:01:13.868 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:13.868 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-17 23:01:13.868 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms.
17-03-17 23:01:13.898 -07 000000478 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:13.898 -07 000000623 INF: Autofocus start
17-03-17 23:01:13.898 -07 000000623 INF: MeasureProfile start
17-03-17 23:01:13.898 -07 000000409 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:13.908 -07 000000478 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:01:13.908 -07 000000478 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:01:13.908 -07 000000623 INF: MeasureProfile done
17-03-17 23:01:13.908 -07 000000623 INF: X=17  Z correction [um]=0.05782829
17-03-17 23:01:13.908 -07 000000623 INF: Autofocus finished
17-03-17 23:01:14.108 -07 000000627 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:01:14.108 -07 000000478 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:01:14.118 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.134887040936507. ----------
17-03-17 23:01:14.118 -07 000000610 INF: Cycle	70	Tile	18	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:01:14.118 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27990, sync = True, waitForSettling = True)
17-03-17 23:01:14.118 -07 000000610 INF: Z Motor: Moving to -0.128130 mm, started at -0.134887 mm, distance = 6.76 um
17-03-17 23:01:14.118 -07 000000610 INF: FPGA: Xmit ZDACW 27990\n [Z Motor]
17-03-17 23:01:14.118 -07 000000623 INF: FPGA: Recv ZDACW
17-03-17 23:01:14.128 -07 000000610 INF: FPGA: 'ZDACW 27990' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-17 23:01:14.128 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:14.128 -07 000000547 INF: FPGA: Recv ZDACR 27990
17-03-17 23:01:14.138 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.138 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:01:14.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.288 -07 000000382 INF: FPGA: Recv ZSGSRD 29239
17-03-17 23:01:14.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:14.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.298 -07 000000593 INF: FPGA: Recv ZSGSRD 29238
17-03-17 23:01:14.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.308 -07 000000627 INF: FPGA: Recv ZSGSRD 29239
17-03-17 23:01:14.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.318 -07 000000448 INF: FPGA: Recv ZSGSRD 29232
17-03-17 23:01:14.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.328 -07 000000627 INF: FPGA: Recv ZSGSRD 29231
17-03-17 23:01:14.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.338 -07 000000448 INF: FPGA: Recv ZSGSRD 29241
17-03-17 23:01:14.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.348 -07 000000593 INF: FPGA: Recv ZSGSRD 29234
17-03-17 23:01:14.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.358 -07 000000561 INF: FPGA: Recv ZSGSRD 29233
17-03-17 23:01:14.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.368 -07 000000576 INF: FPGA: Recv ZSGSRD 29237
17-03-17 23:01:14.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.378 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:14.378 -07 000000547 INF: FPGA: Recv ZSGSRD 29237
17-03-17 23:01:14.388 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.388 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:14.388 -07 000000429 INF: FPGA: Recv ZPIEZORD 24850
17-03-17 23:01:14.398 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:14.398 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.271 V. Piezo Error = -9.6 V.
17-03-17 23:01:14.398 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29236 (-127.4 uncal um), Error = 0.8 uncal um, Median = 29237 (-127.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29231 (-127.3 uncal um), Max = 29241 (-127.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:01:14.398 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29236, posNoise = 5, negNoise = 5
17-03-17 23:01:14.398 -07 000000610 INF: Z Motor: After move to -0.128130, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:14.398 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-17 23:01:14.398 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:14.398 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:14.398 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:14.398 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:14.398 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:01:14.398 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:14.398 -07 000000551 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:01:14.398 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:01:14.398 -07 000000415 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-17 23:01:14.398 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:01:14.398 -07 000000551 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:01:14.398 -07 000000551 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:01:14.408 -07 000000415 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-17 23:01:14.408 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:01:14.408 -07 000000551 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-17 23:01:14.408 -07 000000551 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:01:14.418 -07 000000415 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-17 23:01:14.418 -07 000000415 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-17 23:01:14.418 -07 000000551 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-17 23:01:14.418 -07 000000551 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 23:01:14.418 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28167 150\n [Camera]
17-03-17 23:01:14.618 -07 000000478 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:01:15.078 -07 000000448 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 656
17-03-17 23:01:15.088 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 656
17-03-17 23:01:15.088 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:15.088 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:15.088 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-17 23:01:15.088 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 656
17-03-17 23:01:15.088 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 656
17-03-17 23:01:15.088 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:15.088 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:15.088 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-17 23:01:15.278 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28167 849
17-03-17 23:01:15.428 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:01:15.468 -07 000000382 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 377 ms.
17-03-17 23:01:15.468 -07 000000382 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-17 23:01:15.468 -07 000000382 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:15.468 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-17 23:01:15.468 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-17 23:01:15.468 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:15.468 -07 000000382 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:15.468 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-17 23:01:15.468 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-17 23:01:15.478 -07 000000382 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-17 23:01:15.648 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:01:15.648 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:01:15.648 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:15.648 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:15.648 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-17 23:01:15.658 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:01:15.658 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:01:15.658 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:15.658 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:15.658 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-17 23:01:15.838 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP 1415
17-03-17 23:01:15.838 -07 000000409 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:01:15.838 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28167 150' command took 2 ms to send, 1417 ms to get response, and 1421 ms overall
17-03-17 23:01:15.838 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-17 23:01:15.838 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0078125, Z-Position -0.128141618187658. ------
17-03-17 23:01:15.848 -07 000000502 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:15.848 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13462 mm
17-03-17 23:01:15.848 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-17 23:01:15.848 -07 000000561 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:15.848 -07 000000541 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-17 23:01:15.848 -07 000000541 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-17 23:01:15.848 -07 000000547 INF: Z Motor: Entering MoveAbsStepped (DAC = 29408, sync = True, waitForSettling = False)
17-03-17 23:01:15.848 -07 000000547 INF: Z Motor: Moving to -0.134621 mm, started at -0.128142 mm, distance = -6.48 um
17-03-17 23:01:15.858 -07 000000502 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:01:15.858 -07 000000547 INF: FPGA: Xmit ZDACW 29408\n [Z Motor]
17-03-17 23:01:15.858 -07 000000593 INF: FPGA: Recv ZDACW
17-03-17 23:01:15.868 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:15.868 -07 000000547 INF: FPGA: 'ZDACW 29408' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-17 23:01:15.868 -07 000000429 INF: FPGA: Recv YRDPOS 151569
17-03-17 23:01:15.878 -07 000000502 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-17 23:01:15.878 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 21 ms overall
17-03-17 23:01:15.878 -07 000000541 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:15.878 -07 000000541 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-17 23:01:15.878 -07 000000541 INF: Y Motor: Moving 1351 steps-30
17-03-17 23:01:15.888 -07 000000547 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:15.888 -07 000000576 INF: FPGA: Recv ZDACR 29408
17-03-17 23:01:15.898 -07 000000547 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:01:15.898 -07 000000547 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-17 23:01:15.898 -07 000000541 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-17 23:01:16.058 -07 000000551 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 402 ms.
17-03-17 23:01:16.058 -07 000000551 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 23:01:16.058 -07 000000551 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:16.058 -07 000000486 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 401 ms.
17-03-17 23:01:16.058 -07 000000486 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-17 23:01:16.058 -07 000000486 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:16.058 -07 000000486 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:16.058 -07 000000551 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 23:01:16.058 -07 000000551 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-17 23:01:16.068 -07 000000486 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-17 23:01:16.078 -07 000000415 INF: FPGA: Recv FOCMRRFOC
17-03-17 23:01:16.078 -07 000000502 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-17 23:01:16.268 -07 000000551 INF: FPGA: Recv YMVTILE
17-03-17 23:01:16.268 -07 000000541 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-17 23:01:16.298 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:16.298 -07 000000551 INF: FPGA: Recv YRDPOS 153255
17-03-17 23:01:16.308 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:01:16.308 -07 000000541 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:16.308 -07 000000541 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-17 23:01:16.308 -07 000000541 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.845 mm, average velocity = 2.139 mm/sec
17-03-17 23:01:17.028 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-17 23:01:17.028 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 69. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=19, R2=17, Total=36. Bubbles this run: R1=1104, R2=1145, Total=2249. Warn if over 250 bubbles per interval.
17-03-17 23:01:17.258 -07 000000541 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-17 23:01:17.258 -07 000000561 INF: FPGA: Recv YRDPOS 153255
17-03-17 23:01:17.268 -07 000000541 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:17.268 -07 000000541 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-17 23:01:17.278 -07 000000541 INF: Y Motor: After move to 74.852608, error = -0.021065, min/max error = -0.022606/0.004186, tolerance = 0.500000 mm
17-03-17 23:01:17.278 -07 000000541 INF: Y Motor: Position error after settling (table move) = -43 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-17 23:01:17.278 -07 000000541 INF: Y Motor: Moved to 74.8315 after 1429 ms (table move)
17-03-17 23:01:17.288 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134621 mm (DAC = 29408)
17-03-17 23:01:17.298 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.003063,
17-03-17 23:01:17.308 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.308 -07 000000382 INF: FPGA: Recv ZSGSRD 30243
17-03-17 23:01:17.318 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-17 23:01:17.338 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.338 -07 000000547 INF: FPGA: Recv ZSGSRD 30251
17-03-17 23:01:17.348 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:01:17.368 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.368 -07 000000502 INF: FPGA: Recv ZSGSRD 30236
17-03-17 23:01:17.378 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-17 23:01:17.378 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.378 -07 000000547 INF: FPGA: Recv ZSGSRD 30244
17-03-17 23:01:17.388 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.388 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.388 -07 000000475 INF: FPGA: Recv ZSGSRD 30240
17-03-17 23:01:17.398 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.398 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.398 -07 000000541 INF: FPGA: Recv ZSGSRD 30247
17-03-17 23:01:17.408 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.408 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.408 -07 000000478 INF: FPGA: Recv ZSGSRD 30245
17-03-17 23:01:17.418 -07 000000501 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.418 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.418 -07 000000623 INF: FPGA: Recv ZSGSRD 30250
17-03-17 23:01:17.428 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.428 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.428 -07 000000593 INF: FPGA: Recv ZSGSRD 30250
17-03-17 23:01:17.438 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.438 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:17.438 -07 000000551 INF: FPGA: Recv ZSGSRD 30242
17-03-17 23:01:17.448 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.448 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:17.448 -07 000000482 INF: FPGA: Recv ZPIEZORD 26184
17-03-17 23:01:17.458 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:17.458 -07 000000501 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.487 V. Piezo Error = -8.9 V.
17-03-17 23:01:17.458 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.6 um, Read 10 ADC samples: Avg = 30245 (-133.8 uncal um), Error = 0.8 uncal um, Median = 30244 (-133.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30236 (-133.8 uncal um), Max = 30251 (-133.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-17 23:01:17.458 -07 000000501 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30245, posNoise = 6, negNoise = 9
17-03-17 23:01:17.458 -07 000000501 INF: Z Motor: After move to -0.134621, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:17.458 -07 000000501 INF: Z Motor: Settle wait time = 1433 ms, measure time = 168 ms (allowed 150 ms), total time = 1601 ms
17-03-17 23:01:17.458 -07 000000501 INF: Z Motor: Warning: Actual position measuring time = 168 ms, longer than max expected time of 150 ms
17-03-17 23:01:17.458 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-17 23:01:17.458 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-17 23:01:17.458 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:17.458 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:17.458 -07 000000486 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:17.458 -07 000000415 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:17.458 -07 000000409 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-17 23:01:17.458 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:17.458 -07 000000409 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-17 23:01:17.458 -07 000000409 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-17 23:01:17.468 -07 000000409 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-17 23:01:17.468 -07 000000409 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-17 23:01:17.478 -07 000000409 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 9 ms.
17-03-17 23:01:17.478 -07 000000409 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-17 23:01:17.478 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 200\n [Camera]
17-03-17 23:01:17.518 -07 000000618 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-17 23:01:17.718 -07 000000561 INF: FPGA: Recv @CAMSNAP img rdy 240
17-03-17 23:01:17.718 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 240
17-03-17 23:01:17.718 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-17 23:01:17.718 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1201016592, 0x0, 559484976) start.
17-03-17 23:01:17.758 -07 000000382 INF: FPGA: Recv @CAMSNAP 280
17-03-17 23:01:17.758 -07 000000551 INF: FPGA: Recv CAMSNAP
17-03-17 23:01:17.758 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 200' command took 1 ms to send, 278 ms to get response, and 284 ms overall
17-03-17 23:01:17.838 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1201016592, 0x0, 559484976) end. Duration was 116 ms.
17-03-17 23:01:17.838 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:17.838 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-17 23:01:17.838 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-17 23:01:17.858 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-17 23:01:17.858 -07 000000576 INF: Autofocus start
17-03-17 23:01:17.858 -07 000000576 INF: MeasureProfile start
17-03-17 23:01:17.858 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-17 23:01:17.868 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-17 23:01:17.868 -07 000000618 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-17 23:01:17.868 -07 000000576 INF: MeasureProfile done
17-03-17 23:01:17.868 -07 000000576 INF: X=-3  Z correction [um]=-0.01800644
17-03-17 23:01:17.868 -07 000000576 INF: Autofocus finished
17-03-17 23:01:18.068 -07 000000382 INF: FPGA: Recv FOCMRRIMG
17-03-17 23:01:18.068 -07 000000618 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-17 23:01:18.068 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83154296875, Z-position -0.134623648238695. ----------
17-03-17 23:01:18.068 -07 000000610 INF: Cycle	70	Tile	19	Exposure Settings		A	464	G	223	T	223	C	464
17-03-17 23:01:18.078 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27917, sync = True, waitForSettling = True)
17-03-17 23:01:18.078 -07 000000610 INF: Z Motor: Moving to -0.127796 mm, started at -0.134624 mm, distance = 6.83 um
17-03-17 23:01:18.078 -07 000000610 INF: FPGA: Xmit ZDACW 27917\n [Z Motor]
17-03-17 23:01:18.078 -07 000000486 INF: FPGA: Recv ZDACW
17-03-17 23:01:18.088 -07 000000610 INF: FPGA: 'ZDACW 27917' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-17 23:01:18.088 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-17 23:01:18.088 -07 000000482 INF: FPGA: Recv ZDACR 27917
17-03-17 23:01:18.098 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.098 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-17 23:01:18.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.248 -07 000000448 INF: FPGA: Recv ZSGSRD 29179
17-03-17 23:01:18.258 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-17 23:01:18.258 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.258 -07 000000482 INF: FPGA: Recv ZSGSRD 29190
17-03-17 23:01:18.268 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.268 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.268 -07 000000541 INF: FPGA: Recv ZSGSRD 29187
17-03-17 23:01:18.278 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.278 -07 000000462 INF: FPGA: Recv ZSGSRD 29181
17-03-17 23:01:18.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.288 -07 000000593 INF: FPGA: Recv ZSGSRD 29185
17-03-17 23:01:18.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.298 -07 000000409 INF: FPGA: Recv ZSGSRD 29188
17-03-17 23:01:18.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.308 -07 000000478 INF: FPGA: Recv ZSGSRD 29188
17-03-17 23:01:18.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.318 -07 000000551 INF: FPGA: Recv ZSGSRD 29180
17-03-17 23:01:18.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.328 -07 000000547 INF: FPGA: Recv ZSGSRD 29181
17-03-17 23:01:18.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-17 23:01:18.338 -07 000000429 INF: FPGA: Recv ZSGSRD 29181
17-03-17 23:01:18.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.348 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-17 23:01:18.348 -07 000000541 INF: FPGA: Recv ZPIEZORD 24787
17-03-17 23:01:18.358 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-17 23:01:18.358 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.260 V. Piezo Error = -9.6 V.
17-03-17 23:01:18.358 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.8 um, Read 10 ADC samples: Avg = 29184 (-127.0 uncal um), Error = 0.8 uncal um, Median = 29183 (-127.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29179 (-127.0 uncal um), Max = 29190 (-127.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-17 23:01:18.358 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29184, posNoise = 6, negNoise = 5
17-03-17 23:01:18.358 -07 000000610 INF: Z Motor: After move to -0.127796, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-17 23:01:18.358 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-17 23:01:18.358 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-17 23:01:18.358 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-17 23:01:18.358 -07 000000623 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-17 23:01:18.358 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-17 23:01:18.358 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-17 23:01:18.358 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-17 23:01:18.358 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-17 23:01:18.358 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-17 23:01:18.358 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-17 23:01:18.358 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-17 23:01:18.358 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-17 23:01:18.358 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-17 23:01:18.368 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-17 23:01:18.368 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-17 23:01:18.368 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-17 23:01:18.368 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-17 23:01:18.378 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-17 23:01:18.378 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-17 23:01:18.378 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-17 23:01:18.378 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-17 23:01:18.378 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 464 464 223 223 28093 150\n [Camera]
17-03-17 23:01:18.578 -07 000000415 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-17 23:01:19.048 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 660
17-03-17 23:01:19.048 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 660
17-03-17 23:01:19.048 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:19.048 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:19.048 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-17 23:01:19.058 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 660
17-03-17 23:01:19.058 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 660
17-03-17 23:01:19.058 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:19.058 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:19.058 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-17 23:01:19.238 -07 000000547 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28093 849
17-03-17 23:01:19.388 -07 000000551 INF: FPGA: Recv @CAMDBLSNAP turning grn on 999
17-03-17 23:01:19.428 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 372 ms.
17-03-17 23:01:19.428 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-17 23:01:19.428 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:19.428 -07 000000475 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 379 ms.
17-03-17 23:01:19.428 -07 000000475 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-17 23:01:19.428 -07 000000475 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:19.428 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:19.438 -07 000000475 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:19.438 -07 000000475 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-17 23:01:19.438 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-17 23:01:19.608 -07 000000623 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1222
17-03-17 23:01:19.608 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1222
17-03-17 23:01:19.618 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-17 23:01:19.618 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-17 23:01:19.618 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-17 23:01:19.618 -07 000000429 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1222
17-03-17 23:01:19.618 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1222
17-03-17 23:01:19.618 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-17 23:01:19.618 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-17 23:01:19.618 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-17 23:01:19.808 -07 000000382 INF: FPGA: Recv @CAMDBLSNAP 1414
17-03-17 23:01:19.808 -07 000000415 INF: FPGA: Recv CAMDBLSNAP
17-03-17 23:01:19.808 -07 000000610 INF: FPGA: 'CAMDBLSNAP 464 464 223 223 28093 150' command took 2 ms to send, 1411 ms to get response, and 1422 ms overall
17-03-17 23:01:20.018 -07 000000541 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 403 ms.
17-03-17 23:01:20.018 -07 000000541 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-17 23:01:20.018 -07 000000541 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:20.018 -07 000000409 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 403 ms.
17-03-17 23:01:20.018 -07 000000409 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-17 23:01:20.018 -07 000000409 INF: Camera: CopyActivePixFullImage start.
17-03-17 23:01:20.028 -07 000000409 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-17 23:01:20.028 -07 000000541 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-17 23:01:20.028 -07 000000541 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-17 23:01:20.028 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-17 23:01:20.028 -07 000000409 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms.
17-03-17 23:01:20.068 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-17 23:01:20.068 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-17 23:01:20.108 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms.
17-03-17 23:01:20.128 -07 000000610 INF: Enabling Skipping AutoFocus in the next 5 cycles.
17-03-17 23:01:20.128 -07 000000610 INF: Imaging Cycle 70: ScanTilesCommand Cycle 70 time end. Duration was 145531 ms.
17-03-17 23:01:20.128 -07 000000610 INF: =================== Cycle #70 ===================
17-03-17 23:01:20.128 -07 000000610 INF: ===================  ===================
17-03-17 23:01:20.128 -07 000000541 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-17 23:01:20.128 -07 000000576 INF: FPGA: Recv EXLED1ADCR 23
17-03-17 23:01:20.138 -07 000000541 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-17 23:01:20.138 -07 000000541 INF: GreenLED: Using Green data: Photodiode ADC 23 --> 0.0 mW (old method), or 1.7 mW (new method). Difference = 1.6 mW
17-03-17 23:01:20.138 -07 000000541 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 70, FrontChillerTemperature: 4.003063, FrontChillerHeatSinkTemperature: 0.390021, AmbientTemperature: 18.81201, FlowCellCompartmentTemperature: 21.99544, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.62993, GreenLEDSensorTemperature: 25.8317, PhotodiodePowerAdcGreen: 23, PhotodiodePowerMwGreen: 1.653493
17-03-17 23:01:20.188 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.