17-03-18 01:43:34.050 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:43:34.050 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 01:43:34.050 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8311 mm, delta = 0.5495 mm
17-03-18 01:43:34.050 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:43:34.050 -07 000000611 INF: FPGA: Recv YRDPOS 153255
17-03-18 01:43:34.060 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:43:34.060 -07 000000610 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:43:34.060 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 01:43:34.060 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 01:43:34.060 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 01:43:34.180 -07 000000608 INF: FPGA: Recv YMVTO 154377 873
17-03-18 01:43:34.180 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 112 ms to get response, and 116 ms overall
17-03-18 01:43:34.180 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm)
17-03-18 01:43:34.180 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.550 mm) should take 878 steps, but required 873 steps (0.546 mm). Slippage = -0.003 mm (-0.01%).
17-03-18 01:43:34.180 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.550 mm, average velocity = 4.737 mm/sec
17-03-18 01:43:34.600 -07 000000438 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.988112,
17-03-18 01:43:37.180 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:43:37.180 -07 000000501 INF: FPGA: Recv YRDPOS 154380
17-03-18 01:43:37.190 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:43:37.190 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:43:37.220 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:43:37.220 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm)
17-03-18 01:43:37.220 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3165 ms
17-03-18 01:43:37.220 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 60° ===================
17-03-18 01:43:37.220 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 01:43:37.220 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 01:43:37.230 -07 000000611 INF: FPGA: Recv TEC2TEMP 
17-03-18 01:43:37.240 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 01:43:37.240 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 01:43:37.240 -07 000000611 INF: FPGA: Recv TEC2EN 
17-03-18 01:43:37.250 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:43:37.250 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 60° ===================
17-03-18 01:43:37.250 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:43:37.250 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 01:43:37.250 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:43:37.280 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 01:43:37.280 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 01:43:37.280 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 01:43:37.290 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:43:37.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1408, R2=1462, Total=2870. Warn if over 250 bubbles per interval.
17-03-18 01:43:37.580 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:43:37.600 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 01:43:37.600 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 01:43:37.650 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:43:37.670 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:43:37.670 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:43:37.770 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:43:37.770 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 01:43:37.770 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:37.800 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 01:43:37.800 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 01:43:37.800 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:43:37.930 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 01:43:37.970 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:39.980 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.954032,
17-03-18 01:43:41.100 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:41.130 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:41.550 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:41.580 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:42.000 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:42.030 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:42.030 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 01:43:42.030 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:43:42.160 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:42.190 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 01:43:42.190 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 01:43:42.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 2
17-03-18 01:43:42.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=2, R2=2, Total=4. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1464, Total=2874. Warn if over 250 bubbles per interval.
17-03-18 01:43:42.320 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:42.350 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 01:43:42.350 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 01:43:42.350 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:43:42.480 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:43:42.510 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:42.940 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:42.970 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:42.970 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 01:43:42.970 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:43:44.190 -07 000000610 INF: AsyncDelayTimer waited 1216ms
17-03-18 01:43:44.190 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 01:43:44.190 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:43:44.210 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:43:44.210 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 01:43:44.210 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 01:43:44.350 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:43:44.370 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 01:43:44.370 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 01:43:44.420 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:43:44.440 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 01:43:44.440 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:43:44.540 -07 000000610 INF: =================== Cycle #91, Pumping Reagent CMS (4) ===================
17-03-18 01:43:44.540 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 01:43:44.540 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:44.570 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 01:43:44.570 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 01:43:44.570 -07 000000610 INF: =================== Cycle #91, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 01:43:44.700 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 01:43:44.740 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:45.340 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.994908,
17-03-18 01:43:46.180 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:46.210 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:46.630 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:46.660 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:46.660 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 01:43:46.660 -07 000000610 INF: =================== Cycle #91, Pumping Reagent CMS (4) ===================
17-03-18 01:43:46.790 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:46.820 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 01:43:46.820 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 01:43:46.950 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:46.980 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 01:43:46.980 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 01:43:46.980 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:43:47.110 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:43:47.140 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:47.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 2 R1 0
17-03-18 01:43:47.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=2, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:43:47.570 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:47.600 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:47.600 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 01:43:47.600 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:43:48.820 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 01:43:48.820 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 01:43:48.820 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:43:48.840 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 01:43:48.840 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 01:43:48.840 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 01:43:48.990 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:43:49.010 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 01:43:49.010 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 01:43:49.060 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:43:49.080 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:43:49.080 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:43:49.180 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:43:49.180 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 01:43:49.180 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:49.210 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 01:43:49.210 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 01:43:49.210 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:43:49.340 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 01:43:49.380 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:50.250 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:50.280 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:50.280 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 01:43:50.280 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:43:50.410 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:50.440 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 01:43:50.440 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 01:43:50.570 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:43:50.600 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 01:43:50.600 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 01:43:50.600 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:43:50.710 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.004458,
17-03-18 01:43:50.730 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:43:51.720 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:52.150 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:52.180 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:52.180 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 01:43:52.180 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:43:52.180 -07 000000487 INF: WaitCommand(10000) start
17-03-18 01:43:52.180 -07 000000501 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 01:43:52.180 -07 000000501 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 01:43:52.290 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:43:52.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:43:52.440 -07 000000501 INF: AsyncDelayTimer waited 256ms
17-03-18 01:43:52.440 -07 000000501 INF: LanePump: Xmit /1?\r
17-03-18 01:43:52.470 -07 000000501 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 01:43:52.470 -07 000000501 INF: LanePump: Current Position of Pump is: 1110
17-03-18 01:43:52.600 -07 000000501 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 01:43:52.640 -07 000000501 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:54.170 -07 000000501 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:54.200 -07 000000501 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:43:54.620 -07 000000501 INF: LanePump: Xmit /1Q\r
17-03-18 01:43:54.650 -07 000000501 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:43:54.650 -07 000000501 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 01:43:54.650 -07 000000501 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 01:43:54.650 -07 000000501 INF: ===================  ===================
17-03-18 01:43:57.060 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.012614,
17-03-18 01:43:57.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:43:57.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:02.190 -07 000000487 INF: WaitCommand(10000) end
17-03-18 01:44:02.190 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:44:02.190 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 01:44:02.190 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:02.220 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 01:44:02.220 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 01:44:02.220 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:44:02.290 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:02.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:02.350 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 01:44:02.390 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:02.420 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.037119,
17-03-18 01:44:07.290 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:07.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:07.780 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.001704,
17-03-18 01:44:08.520 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:08.550 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:08.970 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:09.000 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:09.420 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:09.450 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:09.870 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:09.900 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:10.320 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:10.720 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:10.720 -07 000000610 INF: LanePump: Waited 8329 ms for pump motion to complete
17-03-18 01:44:10.720 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:44:10.850 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:10.880 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 01:44:10.880 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 01:44:11.010 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:11.040 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 01:44:11.040 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 01:44:11.040 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:44:11.170 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:44:11.200 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:11.630 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:11.660 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:11.660 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 01:44:11.660 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:44:12.290 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:12.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:12.880 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 01:44:12.880 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 01:44:12.880 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:44:12.900 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:44:12.900 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 01:44:12.900 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 01:44:13.110 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:44:13.130 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 01:44:13.130 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 01:44:13.140 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.989471,
17-03-18 01:44:13.180 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:44:13.200 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 01:44:13.200 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:44:13.300 -07 000000610 INF: =================== Cycle #91, Pumping Reagent IMT (1) ===================
17-03-18 01:44:13.300 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 01:44:13.300 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:13.330 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 01:44:13.330 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 01:44:13.330 -07 000000610 INF: =================== Cycle #91, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 01:44:13.460 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 01:44:13.500 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:14.940 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:14.970 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:15.390 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:15.420 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:15.420 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 01:44:15.420 -07 000000610 INF: =================== Cycle #91, Pumping Reagent IMT (1) ===================
17-03-18 01:44:15.550 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:15.580 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 01:44:15.580 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 01:44:15.710 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:15.740 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 01:44:15.740 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 01:44:15.740 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:44:15.870 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:44:15.900 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:16.330 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:16.360 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:16.360 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 01:44:16.360 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:44:17.290 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:17.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:17.580 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 01:44:17.580 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 01:44:17.580 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:44:17.600 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 01:44:17.600 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 01:44:17.600 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 01:44:17.830 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:44:17.850 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 01:44:17.850 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 01:44:17.900 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:44:17.920 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:44:17.920 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:44:18.020 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:44:18.020 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 01:44:18.020 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:18.050 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 01:44:18.050 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 01:44:18.050 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:44:18.180 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 01:44:18.220 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:18.500 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.989471,
17-03-18 01:44:19.090 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:19.120 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:19.120 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 01:44:19.120 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:44:19.250 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:19.280 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 01:44:19.280 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 01:44:19.410 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:19.440 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 01:44:19.440 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 01:44:19.440 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:44:19.570 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:44:19.600 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:20.030 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:20.060 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:20.060 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 01:44:20.060 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:44:20.060 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 65° ===================
17-03-18 01:44:20.060 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 01:44:20.060 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 01:44:20.060 -07 000000462 INF: FPGA: Recv TEC2TEMP 
17-03-18 01:44:20.070 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:44:20.070 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 01:44:20.070 -07 000000461 INF: FPGA: Recv TEC2EN 
17-03-18 01:44:20.080 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:44:20.080 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 65° ===================
17-03-18 01:44:20.080 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:44:20.080 -07 000000610 INF: WaitCommand(30000) start
17-03-18 01:44:22.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:22.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:23.860 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.027603,
17-03-18 01:44:27.290 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:27.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:29.220 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.020806,
17-03-18 01:44:32.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:32.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:34.580 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.009895,
17-03-18 01:44:37.290 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:37.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:39.940 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.012614,
17-03-18 01:44:42.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:42.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:45.300 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.007176,
17-03-18 01:44:47.290 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:47.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:50.090 -07 000000610 INF: WaitCommand(30000) end
17-03-18 01:44:50.090 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:44:50.090 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 01:44:50.190 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:50.220 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 01:44:50.220 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 01:44:50.220 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:44:50.350 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 01:44:50.390 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:50.660 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.014009,
17-03-18 01:44:50.930 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:50.960 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:50.960 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 01:44:50.960 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:44:51.090 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:51.120 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 01:44:51.120 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 01:44:51.250 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:44:51.280 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 01:44:51.280 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 01:44:51.280 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:44:51.410 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:44:51.440 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:51.870 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:51.900 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:51.900 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 01:44:51.900 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:44:51.900 -07 000000590 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 01:44:51.900 -07 000000502 INF: WaitCommand(30000) start
17-03-18 01:44:51.900 -07 000000590 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 01:44:52.290 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:52.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:44:53.120 -07 000000590 INF: AsyncDelayTimer waited 1214ms
17-03-18 01:44:53.120 -07 000000590 INF: LanePump: Xmit /1?\r
17-03-18 01:44:53.150 -07 000000590 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 01:44:53.150 -07 000000590 INF: LanePump: Current Position of Pump is: 1920
17-03-18 01:44:53.280 -07 000000590 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 01:44:53.320 -07 000000590 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:55.660 -07 000000590 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:55.690 -07 000000590 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:44:56.020 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.007176,
17-03-18 01:44:56.110 -07 000000590 INF: LanePump: Xmit /1Q\r
17-03-18 01:44:56.140 -07 000000590 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:44:56.140 -07 000000590 INF: LanePump: Waited 2820 ms for pump motion to complete
17-03-18 01:44:56.140 -07 000000590 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 01:44:56.140 -07 000000590 INF: ===================  ===================
17-03-18 01:44:57.290 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:44:57.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:01.380 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.011254,
17-03-18 01:45:02.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:02.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:06.740 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.009895,
17-03-18 01:45:07.290 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:07.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:12.380 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:12.380 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:12.690 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.02213,
17-03-18 01:45:17.290 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:17.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:18.060 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.979922,
17-03-18 01:45:21.910 -07 000000502 INF: WaitCommand(30000) end
17-03-18 01:45:21.910 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 22° ===================
17-03-18 01:45:21.910 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 01:45:21.910 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 01:45:21.920 -07 000000461 INF: FPGA: Recv TEC2TEMP 
17-03-18 01:45:21.920 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:45:21.920 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 01:45:21.920 -07 000000561 INF: FPGA: Recv TEC2EN 
17-03-18 01:45:21.930 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:45:21.930 -07 000000610 INF: =================== Cycle #91, Flow Cell Temp 22° ===================
17-03-18 01:45:21.930 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:45:21.930 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:45:21.930 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 01:45:21.930 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:21.970 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 01:45:21.970 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 01:45:21.970 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:45:22.100 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 01:45:22.140 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:22.290 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:22.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:23.430 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.971733,
17-03-18 01:45:25.270 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:25.300 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:25.720 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:25.750 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:26.170 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:26.200 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:26.200 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 01:45:26.200 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:45:26.330 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:26.360 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 01:45:26.360 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 01:45:26.490 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:26.520 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 01:45:26.520 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 01:45:26.520 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:45:26.650 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:45:26.680 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:27.110 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:27.140 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:27.140 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 01:45:27.140 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:45:27.290 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:27.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:28.360 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 01:45:28.360 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 01:45:28.360 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:45:28.380 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:45:28.380 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 01:45:28.380 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 01:45:28.530 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:45:28.550 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 01:45:28.550 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 01:45:28.600 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:45:28.620 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 01:45:28.620 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:45:28.720 -07 000000610 INF: =================== Cycle #91, Pumping Reagent USM (2) ===================
17-03-18 01:45:28.720 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 01:45:28.720 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:28.750 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 01:45:28.750 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 01:45:28.750 -07 000000610 INF: =================== Cycle #91, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 01:45:28.880 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 01:45:28.920 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:29.460 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.969015,
17-03-18 01:45:30.360 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:30.390 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:30.810 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:30.840 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:30.840 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 01:45:30.840 -07 000000610 INF: =================== Cycle #91, Pumping Reagent USM (2) ===================
17-03-18 01:45:30.970 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:31.000 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 01:45:31.000 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 01:45:31.130 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:31.160 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 01:45:31.160 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 01:45:31.160 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:45:31.290 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:45:31.320 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:31.750 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:31.780 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:31.780 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 01:45:31.780 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:45:32.290 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:32.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:33.000 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 01:45:33.000 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 01:45:33.000 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:45:33.020 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 01:45:33.020 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 01:45:33.020 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 01:45:33.170 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:45:33.190 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 01:45:33.190 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 01:45:33.240 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:45:33.260 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:45:33.260 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 01:45:33.360 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:45:33.360 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 01:45:33.360 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:33.390 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 01:45:33.390 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 01:45:33.390 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 01:45:33.520 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 01:45:33.560 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:34.430 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:34.460 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:34.460 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 01:45:34.460 -07 000000610 INF: =================== Cycle #91, Pumping Reagent PR2 (3) ===================
17-03-18 01:45:34.590 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:34.620 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 01:45:34.620 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 01:45:34.750 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 01:45:34.780 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 01:45:34.780 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 01:45:34.780 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 01:45:34.820 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.990831,
17-03-18 01:45:34.910 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 01:45:34.940 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:35.370 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:35.400 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:35.400 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 01:45:35.400 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:45:35.400 -07 000000590 INF: WaitCommand(10000) start
17-03-18 01:45:35.400 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 01:45:35.400 -07 000000502 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 01:45:36.620 -07 000000502 INF: AsyncDelayTimer waited 1216ms
17-03-18 01:45:36.620 -07 000000502 INF: LanePump: Xmit /1?\r
17-03-18 01:45:36.650 -07 000000502 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 01:45:36.650 -07 000000502 INF: LanePump: Current Position of Pump is: 1110
17-03-18 01:45:36.780 -07 000000502 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 01:45:36.820 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:37.290 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:37.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:38.350 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:38.380 -07 000000502 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 01:45:38.800 -07 000000502 INF: LanePump: Xmit /1Q\r
17-03-18 01:45:38.830 -07 000000502 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 01:45:38.830 -07 000000502 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 01:45:38.830 -07 000000502 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 01:45:38.830 -07 000000502 INF: ===================  ===================
17-03-18 01:45:40.180 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.978563,
17-03-18 01:45:42.290 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:42.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:45.410 -07 000000590 INF: WaitCommand(10000) end
17-03-18 01:45:45.410 -07 000000610 INF: =================== Cycle #91, Imaging ===================
17-03-18 01:45:45.410 -07 000000610 INF: Imaging Cycle 91: ScanTilesCommand Cycle 91 time start.
17-03-18 01:45:45.420 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 01:45:45.420 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:45:45.440 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 01:45:45.440 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 01:45:45.440 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 01:45:45.540 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.005817,
17-03-18 01:45:45.740 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 01:45:45.760 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 01:45:45.760 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 01:45:45.810 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 01:45:45.830 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 01:45:45.830 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:45:45.830 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:45:45.830 -07 000000455 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 01:45:45.830 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:45:45.830 -07 000000455 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 01:45:45.830 -07 000000462 INF: FPGA: Recv EXLED1ON 
17-03-18 01:45:45.840 -07 000000455 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:45:45.840 -07 000000455 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 01:45:45.840 -07 000000502 INF: FPGA: Recv EXLED1ADCR 23159
17-03-18 01:45:45.850 -07 000000455 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:45.850 -07 000000455 INF: RedLED: Using Red data: Photodiode ADC 23159 --> 7.4 mW (old method), or 205.3 mW (new method). Difference = 197.8 mW
17-03-18 01:45:45.850 -07 000000455 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 01:45:45.850 -07 000000461 INF: FPGA: Recv EXLED1OFF 
17-03-18 01:45:45.860 -07 000000455 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:45:45.860 -07 000000455 INF: RedLED: LED was on for 20 ms
17-03-18 01:45:45.860 -07 000000455 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 25 ms.
17-03-18 01:45:45.860 -07 000000455 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 01:45:45.860 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:45:45.860 -07 000000455 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 01:45:45.860 -07 000000590 INF: FPGA: Recv EXLED2ON 
17-03-18 01:45:45.870 -07 000000455 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:45:45.870 -07 000000455 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 01:45:45.870 -07 000000592 INF: FPGA: Recv EXLED1ADCR 2101
17-03-18 01:45:45.880 -07 000000455 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:45.880 -07 000000455 INF: GreenLED: Using Green data: Photodiode ADC 2101 --> 0.9 mW (old method), or 182.5 mW (new method). Difference = 181.6 mW
17-03-18 01:45:45.880 -07 000000455 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 01:45:45.880 -07 000000480 INF: FPGA: Recv EXLED2OFF 
17-03-18 01:45:45.890 -07 000000455 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:45.890 -07 000000455 INF: GreenLED: LED was on for 20 ms
17-03-18 01:45:45.890 -07 000000455 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 01:45:45.890 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 01:45:45.890 -07 000000590 INF: FPGA: Recv EMCUR 
17-03-18 01:45:45.900 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:45:45.900 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 01:45:46.400 -07 000000592 INF: FPGA: Recv EMOUT
17-03-18 01:45:46.400 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 01:45:46.400 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 01:45:46.400 -07 000000585 INF: FPGA: Recv EMCUR 
17-03-18 01:45:46.410 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:45:46.410 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 01:45:46.410 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.12658053463721. ------
17-03-18 01:45:46.410 -07 000000590 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17882 mm
17-03-18 01:45:46.410 -07 000000590 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:45:46.410 -07 000000592 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:45:46.410 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 01:45:46.410 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 39064, sync = True, waitForSettling = False)
17-03-18 01:45:46.410 -07 000000447 INF: Z Motor: Moving to -0.178824 mm, started at -0.126581 mm, distance = -52.24 um
17-03-18 01:45:46.410 -07 000000480 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm
17-03-18 01:45:46.410 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:45:46.420 -07 000000447 INF: FPGA: Xmit ZDACW 39064\n [Z Motor]
17-03-18 01:45:46.420 -07 000000592 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:45:46.420 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 01:45:46.430 -07 000000447 INF: FPGA: 'ZDACW 39064' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:46.430 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:46.440 -07 000000592 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:45:46.450 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:45:47.090 -07 000000462 INF: FPGA: Recv YRDPOS 154380
17-03-18 01:45:47.090 -07 000000462 INF: FPGA: Recv ZDACR 39064
17-03-18 01:45:47.090 -07 000000462 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:45:47.090 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 650 ms to get response, and 671 ms overall
17-03-18 01:45:47.090 -07 000000592 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 640 ms to get response, and 670 ms overall
17-03-18 01:45:47.090 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 631 ms to get response, and 661 ms overall
17-03-18 01:45:47.090 -07 000000447 INF: Z Motor: MoveAbsStepped took 672 ms (did NOT wait for settling yet))
17-03-18 01:45:47.090 -07 000000480 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:47.090 -07 000000480 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 01:45:47.090 -07 000000480 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 01:45:47.090 -07 000000480 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 01:45:47.290 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:47.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:48.770 -07 000000487 INF: FPGA: Recv YMVTO 122703 24777
17-03-18 01:45:48.770 -07 000000480 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1678 ms to get response, and 1686 ms overall
17-03-18 01:45:48.770 -07 000000480 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 01:45:48.770 -07 000000480 INF: Y Motor: To move from 75.381 to 59.913 (-15.468 mm) should take 24749 steps, but required 24777 steps (15.486 mm). Slippage = 0.018 mm (0.00%).
17-03-18 01:45:48.780 -07 000000480 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1686 ms, distance = 15.468 mm, average velocity = 9.175 mm/sec
17-03-18 01:45:50.900 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.990831,
17-03-18 01:45:51.630 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:51.630 -07 000000455 INF: FPGA: Recv YRDPOS 122696
17-03-18 01:45:51.640 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.640 -07 000000480 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:51.660 -07 000000480 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:45:51.660 -07 000000480 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-18 01:45:51.660 -07 000000480 INF: Y Motor: Moved to 59.9102 after 5249 ms
17-03-18 01:45:51.670 -07 000000590 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178824 mm (DAC = 39064)
17-03-18 01:45:51.670 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.670 -07 000000455 INF: FPGA: Recv ZSGSRD 37124
17-03-18 01:45:51.680 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:45:51.680 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.680 -07 000000502 INF: FPGA: Recv ZSGSRD 37121
17-03-18 01:45:51.690 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.690 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.690 -07 000000480 INF: FPGA: Recv ZSGSRD 37130
17-03-18 01:45:51.700 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.700 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.700 -07 000000462 INF: FPGA: Recv ZSGSRD 37130
17-03-18 01:45:51.710 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.710 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.710 -07 000000585 INF: FPGA: Recv ZSGSRD 37127
17-03-18 01:45:51.720 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.720 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.720 -07 000000461 INF: FPGA: Recv ZSGSRD 37136
17-03-18 01:45:51.730 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.730 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.730 -07 000000455 INF: FPGA: Recv ZSGSRD 37122
17-03-18 01:45:51.740 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.740 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.740 -07 000000461 INF: FPGA: Recv ZSGSRD 37121
17-03-18 01:45:51.750 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.750 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.750 -07 000000455 INF: FPGA: Recv ZSGSRD 37126
17-03-18 01:45:51.760 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.760 -07 000000590 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:51.760 -07 000000480 INF: FPGA: Recv ZSGSRD 37127
17-03-18 01:45:51.770 -07 000000590 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.770 -07 000000590 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:45:51.770 -07 000000502 INF: FPGA: Recv ZPIEZORD 33410
17-03-18 01:45:51.780 -07 000000590 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:51.780 -07 000000590 INF: Z Motor: Piezo is near 51.4 V (nominally 0 to 100 V), expect near 59.6 V, since DAC is at 5.961 V. Piezo Error = -8.2 V.
17-03-18 01:45:51.780 -07 000000590 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.8 um, Read 10 ADC samples: Avg = 37126 (-177.9 uncal um), Error = 0.9 uncal um, Median = 37126 (-177.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 37121 (-177.9 uncal um), Max = 37136 (-178.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:45:51.780 -07 000000590 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37126, posNoise = 10, negNoise = 5
17-03-18 01:45:51.780 -07 000000590 INF: Z Motor: After move to -0.178824, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:45:51.780 -07 000000590 INF: Z Motor: Settle wait time = 5252 ms, measure time = 109 ms (allowed 150 ms), total time = 5361 ms
17-03-18 01:45:51.780 -07 000000590 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:45:51.830 -07 000000590 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 5413 ms
17-03-18 01:45:51.830 -07 000000590 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:45:51.830 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:45:51.830 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:45:51.830 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:45:51.830 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:45:51.830 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:45:51.830 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:45:51.830 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:45:51.830 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 01:45:51.860 -07 000000461 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 01:45:51.860 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:45:51.860 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 01:45:51.860 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:45:51.880 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:45:51.880 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 01:45:51.880 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:45:51.920 -07 000000590 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:45:52.220 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:45:52.220 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:45:52.230 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:45:52.230 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) start.
17-03-18 01:45:52.260 -07 000000480 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:45:52.260 -07 000000447 INF: FPGA: Recv CAMSNAP
17-03-18 01:45:52.260 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 385 ms overall
17-03-18 01:45:52.290 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:52.350 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 610603336, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 01:45:52.350 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:52.360 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 01:45:52.360 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 01:45:52.360 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:52.460 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:45:52.460 -07 000000480 INF: Image SNR check: start
17-03-18 01:45:52.460 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:45:52.470 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:45:52.470 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:45:52.470 -07 000000480 INF: Image SNR check: pass  [peak (Max-Min)=172.07]
17-03-18 01:45:52.470 -07 000000480 INF: Autofocus start
17-03-18 01:45:52.470 -07 000000480 INF: MeasureProfile start
17-03-18 01:45:52.490 -07 000000480 INF: MeasureProfile done
17-03-18 01:45:52.490 -07 000000480 INF: X=48  Z correction [um]=0.1739867
17-03-18 01:45:52.490 -07 000000480 INF: Autofocus finished
17-03-18 01:45:52.670 -07 000000480 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:45:52.670 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:45:52.670 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178828651986152. ----------
17-03-18 01:45:52.680 -07 000000610 INF: Cycle	91	Tile	1	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:45:52.680 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37614, sync = True, waitForSettling = True)
17-03-18 01:45:52.680 -07 000000610 INF: Z Motor: Moving to -0.172186 mm, started at -0.178829 mm, distance = 6.64 um
17-03-18 01:45:52.680 -07 000000610 INF: FPGA: Xmit ZDACW 37614\n [Z Motor]
17-03-18 01:45:52.680 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 01:45:52.690 -07 000000610 INF: FPGA: 'ZDACW 37614' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:45:52.690 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:45:52.690 -07 000000461 INF: FPGA: Recv ZDACR 37614
17-03-18 01:45:52.700 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.700 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:45:52.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.850 -07 000000461 INF: FPGA: Recv ZSGSRD 36097
17-03-18 01:45:52.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:52.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.860 -07 000000585 INF: FPGA: Recv ZSGSRD 36096
17-03-18 01:45:52.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.870 -07 000000461 INF: FPGA: Recv ZSGSRD 36094
17-03-18 01:45:52.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.880 -07 000000590 INF: FPGA: Recv ZSGSRD 36098
17-03-18 01:45:52.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.890 -07 000000502 INF: FPGA: Recv ZSGSRD 36095
17-03-18 01:45:52.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.900 -07 000000585 INF: FPGA: Recv ZSGSRD 36090
17-03-18 01:45:52.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.910 -07 000000455 INF: FPGA: Recv ZSGSRD 36097
17-03-18 01:45:52.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.920 -07 000000585 INF: FPGA: Recv ZSGSRD 36099
17-03-18 01:45:52.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.930 -07 000000455 INF: FPGA: Recv ZSGSRD 36090
17-03-18 01:45:52.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:52.940 -07 000000480 INF: FPGA: Recv ZSGSRD 36083
17-03-18 01:45:52.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.950 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:45:52.950 -07 000000502 INF: FPGA: Recv ZPIEZORD 31990
17-03-18 01:45:52.960 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:52.960 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.740 V. Piezo Error = -9.1 V.
17-03-18 01:45:52.960 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36094 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36096 (-171.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36083 (-171.2 uncal um), Max = 36099 (-171.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 01:45:52.960 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36094, posNoise = 5, negNoise = 11
17-03-18 01:45:52.960 -07 000000610 INF: Z Motor: After move to -0.172186, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:45:52.960 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 01:45:52.960 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:45:52.960 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:45:52.960 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:45:52.960 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:45:52.960 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:45:52.960 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:45:52.960 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:45:52.960 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:45:52.960 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:45:52.960 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:45:52.960 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:45:52.960 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 01:45:52.960 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:45:52.960 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:45:52.980 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 01:45:52.980 -07 000000461 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 01:45:52.980 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms.
17-03-18 01:45:52.980 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:45:52.990 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:45:52.990 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:45:53.000 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:45:53.010 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 44 ms.
17-03-18 01:45:53.010 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37791 150\n [Camera]
17-03-18 01:45:53.210 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:45:53.600 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:45:53.600 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:45:53.600 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:45:53.600 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:45:53.600 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:45:53.600 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:45:53.740 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:45:53.740 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1082280040, 0x0, 391868352) start.
17-03-18 01:45:53.740 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:45:53.740 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) start.
17-03-18 01:45:53.790 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37791 776
17-03-18 01:45:53.940 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:45:54.130 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:45:54.130 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:45:54.130 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:45:54.130 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:45:54.130 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:45:54.130 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:45:54.140 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 574918816, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 01:45:54.140 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 01:45:54.140 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:54.140 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1082280040, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 01:45:54.140 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 01:45:54.140 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:54.140 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 01:45:54.150 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 9 ms.
17-03-18 01:45:54.150 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 547 ms.
17-03-18 01:45:54.150 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:45:54.150 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1117702304, 0x0, 391868352) start.
17-03-18 01:45:54.150 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 548 ms.
17-03-18 01:45:54.260 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:45:54.260 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1153124568, 0x0, 418435064) start.
17-03-18 01:45:54.320 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:45:54.320 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:45:54.320 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37791 150' command took 2 ms to send, 1305 ms to get response, and 1313 ms overall
17-03-18 01:45:54.320 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172220
17-03-18 01:45:54.320 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17222 mm
17-03-18 01:45:54.320 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:45:54.330 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 37621, sync = True, waitForSettling = False)
17-03-18 01:45:54.330 -07 000000590 INF: Z Motor: Moving to -0.172218 mm, started at -0.172199 mm, distance = -0.02 um
17-03-18 01:45:54.330 -07 000000590 INF: FPGA: Xmit ZDACW 37621\n [Z Motor]
17-03-18 01:45:54.330 -07 000000592 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 01:45:54.330 -07 000000592 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-18 01:45:54.330 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 01:45:54.340 -07 000000590 INF: FPGA: 'ZDACW 37621' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:45:54.340 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:54.340 -07 000000461 INF: FPGA: Recv YRDPOS 122696
17-03-18 01:45:54.350 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 01:45:54.350 -07 000000592 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:54.350 -07 000000592 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:45:54.350 -07 000000592 INF: Y Motor: Moving 1332 steps2
17-03-18 01:45:54.350 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:45:54.350 -07 000000585 INF: FPGA: Recv ZDACR 37621
17-03-18 01:45:54.360 -07 000000590 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:45:54.360 -07 000000590 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 01:45:54.360 -07 000000592 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:45:54.540 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1117702304, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 01:45:54.540 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 01:45:54.540 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:54.540 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 01:45:54.540 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 411 ms.
17-03-18 01:45:54.650 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1153124568, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 01:45:54.650 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 01:45:54.650 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:54.650 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 01:45:54.660 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 522 ms.
17-03-18 01:45:54.730 -07 000000487 INF: FPGA: Recv YMVTILE
17-03-18 01:45:54.730 -07 000000592 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 01:45:54.770 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:54.770 -07 000000487 INF: FPGA: Recv YRDPOS 124380
17-03-18 01:45:54.780 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:45:54.780 -07 000000592 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:54.780 -07 000000592 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 01:45:54.780 -07 000000592 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.145 mm/sec
17-03-18 01:45:55.730 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:55.730 -07 000000447 INF: FPGA: Recv YRDPOS 124380
17-03-18 01:45:55.740 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:55.740 -07 000000592 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:55.760 -07 000000592 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:45:55.760 -07 000000592 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:45:55.760 -07 000000592 INF: Y Motor: Moved to 60.7324 after 1436 ms (table move)
17-03-18 01:45:55.770 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172218 mm (DAC = 37621)
17-03-18 01:45:55.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.770 -07 000000592 INF: FPGA: Recv ZSGSRD 36096
17-03-18 01:45:55.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:45:55.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.780 -07 000000592 INF: FPGA: Recv ZSGSRD 36098
17-03-18 01:45:55.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.790 -07 000000592 INF: FPGA: Recv ZSGSRD 36094
17-03-18 01:45:55.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.800 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.800 -07 000000585 INF: FPGA: Recv ZSGSRD 36108
17-03-18 01:45:55.810 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.810 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.810 -07 000000585 INF: FPGA: Recv ZSGSRD 36100
17-03-18 01:45:55.820 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.820 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.820 -07 000000592 INF: FPGA: Recv ZSGSRD 36097
17-03-18 01:45:55.830 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.830 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.830 -07 000000592 INF: FPGA: Recv ZSGSRD 36104
17-03-18 01:45:55.840 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.840 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.840 -07 000000592 INF: FPGA: Recv ZSGSRD 36094
17-03-18 01:45:55.850 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.850 -07 000000502 INF: FPGA: Recv ZSGSRD 36094
17-03-18 01:45:55.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:55.860 -07 000000461 INF: FPGA: Recv ZSGSRD 36098
17-03-18 01:45:55.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.870 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:45:55.870 -07 000000592 INF: FPGA: Recv ZPIEZORD 32039
17-03-18 01:45:55.880 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:55.880 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.741 V. Piezo Error = -9.0 V.
17-03-18 01:45:55.880 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36098 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36098 (-171.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 36094 (-171.3 uncal um), Max = 36108 (-171.4 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:45:55.880 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36098, posNoise = 10, negNoise = 4
17-03-18 01:45:55.880 -07 000000610 INF: Z Motor: After move to -0.172218, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:45:55.880 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 109 ms (allowed 150 ms), total time = 1549 ms
17-03-18 01:45:55.880 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:45:55.930 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 01:45:55.930 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:45:55.930 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.172224561904422. ----------
17-03-18 01:45:55.930 -07 000000610 INF: Cycle	91	Tile	2	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:45:55.930 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37445, sync = True, waitForSettling = True)
17-03-18 01:45:55.930 -07 000000610 INF: Z Motor: Moving to -0.171412 mm, started at -0.172225 mm, distance = 0.81 um
17-03-18 01:45:55.930 -07 000000610 INF: FPGA: Xmit ZDACW 37445\n [Z Motor]
17-03-18 01:45:55.930 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:45:55.940 -07 000000610 INF: FPGA: 'ZDACW 37445' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:45:55.950 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:45:55.950 -07 000000611 INF: FPGA: Recv ZDACR 37445
17-03-18 01:45:55.960 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:45:55.960 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:45:56.110 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.110 -07 000000480 INF: FPGA: Recv ZSGSRD 35982
17-03-18 01:45:56.120 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:56.120 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.120 -07 000000447 INF: FPGA: Recv ZSGSRD 35980
17-03-18 01:45:56.130 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.130 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.130 -07 000000461 INF: FPGA: Recv ZSGSRD 35967
17-03-18 01:45:56.140 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.140 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.140 -07 000000608 INF: FPGA: Recv ZSGSRD 35966
17-03-18 01:45:56.150 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.150 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.150 -07 000000461 INF: FPGA: Recv ZSGSRD 35974
17-03-18 01:45:56.160 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.160 -07 000000447 INF: FPGA: Recv ZSGSRD 35971
17-03-18 01:45:56.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.170 -07 000000502 INF: FPGA: Recv ZSGSRD 35975
17-03-18 01:45:56.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.180 -07 000000447 INF: FPGA: Recv ZSGSRD 35978
17-03-18 01:45:56.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.190 -07 000000461 INF: FPGA: Recv ZSGSRD 35973
17-03-18 01:45:56.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:56.200 -07 000000447 INF: FPGA: Recv ZSGSRD 35980
17-03-18 01:45:56.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.210 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:45:56.210 -07 000000461 INF: FPGA: Recv ZPIEZORD 31848
17-03-18 01:45:56.220 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:56.220 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.714 V. Piezo Error = -9.1 V.
17-03-18 01:45:56.220 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35975 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35974 (-170.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35966 (-170.5 uncal um), Max = 35982 (-170.6 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 01:45:56.220 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35975, posNoise = 7, negNoise = 9
17-03-18 01:45:56.220 -07 000000610 INF: Z Motor: After move to -0.171412, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:45:56.220 -07 000000610 INF: Z Motor: MoveAbsStepped took 286 ms)
17-03-18 01:45:56.220 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:45:56.220 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:45:56.220 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:45:56.220 -07 000000585 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:45:56.220 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:45:56.220 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:45:56.220 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:45:56.220 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:45:56.220 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 01:45:56.220 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:45:56.220 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:45:56.220 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:45:56.230 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:45:56.230 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:45:56.230 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:45:56.230 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:45:56.230 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 01:45:56.230 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 01:45:56.240 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 01:45:56.240 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 01:45:56.240 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37621 150\n [Camera]
17-03-18 01:45:56.260 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.005817,
17-03-18 01:45:56.440 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:45:56.830 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:45:56.830 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:45:56.830 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:45:56.830 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:45:56.830 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:45:56.830 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:45:56.830 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:45:56.830 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:45:56.840 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:45:56.840 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:45:57.020 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37621 776
17-03-18 01:45:57.170 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:45:57.230 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 01:45:57.230 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 01:45:57.230 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:57.230 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 01:45:57.230 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:45:57.240 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:57.240 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:45:57.240 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 01:45:57.240 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:45:57.250 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 01:45:57.290 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:45:57.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:45:57.360 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:45:57.360 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:45:57.360 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:45:57.360 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:45:57.360 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 01:45:57.360 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:45:57.360 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:45:57.360 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:45:57.360 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:45:57.360 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 01:45:57.550 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:45:57.550 -07 000000447 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:45:57.550 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37621 150' command took 2 ms to send, 1307 ms to get response, and 1313 ms overall
17-03-18 01:45:57.550 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171999
17-03-18 01:45:57.550 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17200 mm
17-03-18 01:45:57.550 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:45:57.560 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 01:45:57.560 -07 000000455 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 01:45:57.560 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:57.560 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 37573, sync = True, waitForSettling = False)
17-03-18 01:45:57.560 -07 000000480 INF: Z Motor: Moving to -0.171998 mm, started at -0.171434 mm, distance = -0.56 um
17-03-18 01:45:57.560 -07 000000608 INF: FPGA: Recv YRDPOS 124380
17-03-18 01:45:57.570 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:45:57.570 -07 000000455 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:57.570 -07 000000455 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:45:57.570 -07 000000455 INF: Y Motor: Moving 1344 steps-21
17-03-18 01:45:57.570 -07 000000480 INF: FPGA: Xmit ZDACW 37573\n [Z Motor]
17-03-18 01:45:57.570 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 01:45:57.580 -07 000000480 INF: FPGA: 'ZDACW 37573' command took 1 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 01:45:57.580 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:45:57.580 -07 000000447 INF: FPGA: Recv ZDACR 37573
17-03-18 01:45:57.590 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:57.590 -07 000000480 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 01:45:57.590 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:45:57.760 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 01:45:57.760 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 01:45:57.760 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:57.760 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 01:45:57.760 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:45:57.770 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:45:57.770 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 01:45:57.770 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 01:45:57.770 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:45:57.780 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 01:45:57.970 -07 000000585 INF: FPGA: Recv YMVTILE
17-03-18 01:45:57.970 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall
17-03-18 01:45:58.010 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:58.010 -07 000000502 INF: FPGA: Recv YRDPOS 126081
17-03-18 01:45:58.020 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:45:58.020 -07 000000455 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:58.020 -07 000000455 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 01:45:58.020 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.840 mm, average velocity = 2.106 mm/sec
17-03-18 01:45:58.970 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:45:58.970 -07 000000502 INF: FPGA: Recv YRDPOS 126081
17-03-18 01:45:58.980 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:58.980 -07 000000455 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:45:59.000 -07 000000455 INF: Y Motor: After move to 61.572609, error = -0.009621, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:45:59.000 -07 000000455 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:45:59.000 -07 000000455 INF: Y Motor: Moved to 61.5630 after 1445 ms (table move)
17-03-18 01:45:59.010 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171998 mm (DAC = 37573)
17-03-18 01:45:59.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.010 -07 000000447 INF: FPGA: Recv ZSGSRD 36064
17-03-18 01:45:59.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:59.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.020 -07 000000461 INF: FPGA: Recv ZSGSRD 36073
17-03-18 01:45:59.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.030 -07 000000611 INF: FPGA: Recv ZSGSRD 36068
17-03-18 01:45:59.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.040 -07 000000455 INF: FPGA: Recv ZSGSRD 36069
17-03-18 01:45:59.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.050 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.050 -07 000000611 INF: FPGA: Recv ZSGSRD 36060
17-03-18 01:45:59.060 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.060 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.060 -07 000000455 INF: FPGA: Recv ZSGSRD 36061
17-03-18 01:45:59.070 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.070 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.070 -07 000000611 INF: FPGA: Recv ZSGSRD 36067
17-03-18 01:45:59.080 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.080 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.080 -07 000000461 INF: FPGA: Recv ZSGSRD 36064
17-03-18 01:45:59.090 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.090 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.090 -07 000000502 INF: FPGA: Recv ZSGSRD 36057
17-03-18 01:45:59.100 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.100 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.100 -07 000000461 INF: FPGA: Recv ZSGSRD 36069
17-03-18 01:45:59.110 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.110 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:45:59.110 -07 000000608 INF: FPGA: Recv ZPIEZORD 32021
17-03-18 01:45:59.120 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.120 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.733 V. Piezo Error = -8.9 V.
17-03-18 01:45:59.120 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.0 um, Read 10 ADC samples: Avg = 36065 (-171.1 uncal um), Error = 0.9 uncal um, Median = 36066 (-171.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36057 (-171.1 uncal um), Max = 36073 (-171.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:45:59.120 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36065, posNoise = 8, negNoise = 8
17-03-18 01:45:59.120 -07 000000610 INF: Z Motor: After move to -0.171998, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:45:59.120 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 110 ms (allowed 150 ms), total time = 1557 ms
17-03-18 01:45:59.120 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:45:59.160 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 01:45:59.160 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:45:59.160 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56298828125, Z-position -0.172012562903744. ----------
17-03-18 01:45:59.160 -07 000000610 INF: Cycle	91	Tile	3	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:45:59.160 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37396, sync = True, waitForSettling = True)
17-03-18 01:45:59.160 -07 000000610 INF: Z Motor: Moving to -0.171188 mm, started at -0.172013 mm, distance = 0.82 um
17-03-18 01:45:59.160 -07 000000610 INF: FPGA: Xmit ZDACW 37396\n [Z Motor]
17-03-18 01:45:59.160 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 01:45:59.170 -07 000000610 INF: FPGA: 'ZDACW 37396' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:45:59.170 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:45:59.170 -07 000000480 INF: FPGA: Recv ZDACR 37396
17-03-18 01:45:59.180 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.180 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:45:59.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.330 -07 000000461 INF: FPGA: Recv ZSGSRD 35940
17-03-18 01:45:59.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:45:59.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.340 -07 000000447 INF: FPGA: Recv ZSGSRD 35938
17-03-18 01:45:59.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.350 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.350 -07 000000502 INF: FPGA: Recv ZSGSRD 35938
17-03-18 01:45:59.360 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.360 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.360 -07 000000480 INF: FPGA: Recv ZSGSRD 35939
17-03-18 01:45:59.370 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.370 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.370 -07 000000461 INF: FPGA: Recv ZSGSRD 35935
17-03-18 01:45:59.380 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.380 -07 000000447 INF: FPGA: Recv ZSGSRD 35934
17-03-18 01:45:59.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.390 -07 000000455 INF: FPGA: Recv ZSGSRD 35937
17-03-18 01:45:59.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.400 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.400 -07 000000480 INF: FPGA: Recv ZSGSRD 35939
17-03-18 01:45:59.410 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.410 -07 000000461 INF: FPGA: Recv ZSGSRD 35938
17-03-18 01:45:59.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:45:59.420 -07 000000608 INF: FPGA: Recv ZSGSRD 35939
17-03-18 01:45:59.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.430 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:45:59.430 -07 000000455 INF: FPGA: Recv ZPIEZORD 31803
17-03-18 01:45:59.440 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:45:59.440 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.706 V. Piezo Error = -9.1 V.
17-03-18 01:45:59.440 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35938 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35938 (-170.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35934 (-170.3 uncal um), Max = 35940 (-170.3 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:45:59.440 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35938, posNoise = 2, negNoise = 4
17-03-18 01:45:59.440 -07 000000610 INF: Z Motor: After move to -0.171188, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:45:59.440 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:45:59.440 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:45:59.440 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:45:59.440 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:45:59.440 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:45:59.440 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:45:59.440 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:45:59.440 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:45:59.440 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:45:59.440 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:45:59.440 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:45:59.440 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:45:59.440 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:45:59.450 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:45:59.450 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:45:59.450 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:45:59.450 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:45:59.460 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:45:59.460 -07 000000608 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:45:59.460 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 01:45:59.460 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:45:59.470 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37573 150\n [Camera]
17-03-18 01:45:59.670 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:00.060 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:00.060 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:00.060 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:00.060 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:00.060 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:00.060 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:00.060 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 01:46:00.060 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:00.060 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:00.060 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 01:46:00.250 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37573 776
17-03-18 01:46:00.400 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:00.440 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:46:00.440 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 01:46:00.440 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:00.440 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 01:46:00.440 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:46:00.440 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:00.450 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:00.450 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:00.450 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 01:46:00.450 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 01:46:00.590 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:00.590 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:00.590 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:00.590 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:00.590 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 01:46:00.590 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:00.590 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:00.590 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:00.590 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:00.590 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 01:46:00.780 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:00.780 -07 000000447 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:00.780 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37573 150' command took 2 ms to send, 1304 ms to get response, and 1313 ms overall
17-03-18 01:46:00.780 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 01:46:00.780 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56298828125, Z-Position -0.17119668796174. ------
17-03-18 01:46:00.790 -07 000000590 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:00.790 -07 000000611 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17746 mm
17-03-18 01:46:00.790 -07 000000611 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:00.790 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 01:46:00.790 -07 000000461 INF: Y Motor: Moving to 62.4026 mm, started at 61.5630 mm, delta = 0.8396 mm
17-03-18 01:46:00.790 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 38767, sync = True, waitForSettling = False)
17-03-18 01:46:00.790 -07 000000462 INF: Z Motor: Moving to -0.177464 mm, started at -0.171197 mm, distance = -6.27 um
17-03-18 01:46:00.790 -07 000000608 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:00.800 -07 000000590 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:00.800 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:00.800 -07 000000608 INF: FPGA: Recv YRDPOS 126082
17-03-18 01:46:00.810 -07 000000462 INF: FPGA: Xmit ZDACW 38767\n [Z Motor]
17-03-18 01:46:00.810 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 01:46:00.810 -07 000000461 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:00.810 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 01:46:00.810 -07 000000461 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:00.810 -07 000000461 INF: Y Motor: Moving 1343 steps-20
17-03-18 01:46:00.820 -07 000000590 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:46:00.820 -07 000000462 INF: FPGA: 'ZDACW 38767' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 01:46:00.830 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:00.840 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:00.840 -07 000000502 INF: FPGA: Recv ZDACR 38767
17-03-18 01:46:00.850 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:46:00.850 -07 000000462 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet))
17-03-18 01:46:00.970 -07 000000585 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:46:00.970 -07 000000585 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:46:00.970 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:00.970 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 01:46:00.970 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 01:46:00.970 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:00.970 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:00.970 -07 000000585 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 01:46:00.980 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:00.980 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 01:46:01.020 -07 000000480 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:46:01.020 -07 000000590 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 01:46:01.200 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 01:46:01.200 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-18 01:46:01.250 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:01.260 -07 000000608 INF: FPGA: Recv YRDPOS 127785
17-03-18 01:46:01.260 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 01:46:01.260 -07 000000461 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:01.260 -07 000000461 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 01:46:01.260 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.840 mm, average velocity = 2.131 mm/sec
17-03-18 01:46:01.620 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.02213,
17-03-18 01:46:02.210 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:02.210 -07 000000455 INF: FPGA: Recv YRDPOS 127785
17-03-18 01:46:02.220 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.220 -07 000000461 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:02.240 -07 000000461 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:02.240 -07 000000461 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:02.240 -07 000000461 INF: Y Motor: Moved to 62.3950 after 1453 ms (table move)
17-03-18 01:46:02.250 -07 000000611 INF: Z Motor: EndOfMoveAbsStepped: target = -0.177464 mm (DAC = 38767)
17-03-18 01:46:02.250 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.250 -07 000000592 INF: FPGA: Recv ZSGSRD 36916
17-03-18 01:46:02.260 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.260 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.260 -07 000000455 INF: FPGA: Recv ZSGSRD 36924
17-03-18 01:46:02.270 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.270 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.270 -07 000000502 INF: FPGA: Recv ZSGSRD 36918
17-03-18 01:46:02.280 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.280 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.280 -07 000000455 INF: FPGA: Recv ZSGSRD 36916
17-03-18 01:46:02.290 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.290 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.290 -07 000000502 INF: FPGA: Recv ZSGSRD 36909
17-03-18 01:46:02.290 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:02.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:02.300 -07 000000611 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.300 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.300 -07 000000461 INF: FPGA: Recv ZSGSRD 36908
17-03-18 01:46:02.310 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.310 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.310 -07 000000461 INF: FPGA: Recv ZSGSRD 36915
17-03-18 01:46:02.320 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.320 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.320 -07 000000592 INF: FPGA: Recv ZSGSRD 36908
17-03-18 01:46:02.330 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.330 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.330 -07 000000461 INF: FPGA: Recv ZSGSRD 36919
17-03-18 01:46:02.340 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.340 -07 000000611 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:02.340 -07 000000592 INF: FPGA: Recv ZSGSRD 36923
17-03-18 01:46:02.350 -07 000000611 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.350 -07 000000611 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:02.350 -07 000000592 INF: FPGA: Recv ZPIEZORD 33117
17-03-18 01:46:02.360 -07 000000611 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:02.360 -07 000000611 INF: Z Motor: Piezo is near 50.7 V (nominally 0 to 100 V), expect near 59.2 V, since DAC is at 5.915 V. Piezo Error = -8.4 V.
17-03-18 01:46:02.360 -07 000000611 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.5 um, Read 10 ADC samples: Avg = 36916 (-176.6 uncal um), Error = 0.9 uncal um, Median = 36916 (-176.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36908 (-176.5 uncal um), Max = 36924 (-176.6 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:46:02.360 -07 000000611 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36916, posNoise = 8, negNoise = 8
17-03-18 01:46:02.360 -07 000000611 INF: Z Motor: After move to -0.177464, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:02.360 -07 000000611 INF: Z Motor: Settle wait time = 1456 ms, measure time = 110 ms (allowed 150 ms), total time = 1566 ms
17-03-18 01:46:02.360 -07 000000611 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:02.400 -07 000000611 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1608 ms
17-03-18 01:46:02.400 -07 000000611 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:02.400 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:02.400 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:02.400 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:02.400 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:02.400 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:46:02.400 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:02.400 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 01:46:02.400 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:46:02.410 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:02.410 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:46:02.420 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:46:02.420 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms.
17-03-18 01:46:02.420 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:46:02.470 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:46:02.770 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:46:02.770 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:46:02.770 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:46:02.770 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start.
17-03-18 01:46:02.810 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:46:02.810 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 01:46:02.810 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 385 ms overall
17-03-18 01:46:02.890 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 122 ms.
17-03-18 01:46:02.890 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:02.890 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 01:46:02.890 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 125 ms.
17-03-18 01:46:02.910 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:02.910 -07 000000611 INF: Autofocus start
17-03-18 01:46:02.910 -07 000000611 INF: MeasureProfile start
17-03-18 01:46:02.910 -07 000000592 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:02.920 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:02.920 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:46:02.920 -07 000000611 INF: MeasureProfile done
17-03-18 01:46:02.920 -07 000000611 INF: X=0  Z correction [um]=-0.0713522
17-03-18 01:46:02.920 -07 000000611 INF: Autofocus finished
17-03-18 01:46:03.120 -07 000000502 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:46:03.120 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 01:46:03.120 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.177479567436382. ----------
17-03-18 01:46:03.120 -07 000000610 INF: Cycle	91	Tile	4	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:03.130 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37264, sync = True, waitForSettling = True)
17-03-18 01:46:03.130 -07 000000610 INF: Z Motor: Moving to -0.170584 mm, started at -0.177480 mm, distance = 6.90 um
17-03-18 01:46:03.130 -07 000000610 INF: FPGA: Xmit ZDACW 37264\n [Z Motor]
17-03-18 01:46:03.130 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 01:46:03.140 -07 000000610 INF: FPGA: 'ZDACW 37264' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.140 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:03.140 -07 000000611 INF: FPGA: Recv ZDACR 37264
17-03-18 01:46:03.150 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.150 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:03.300 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.300 -07 000000502 INF: FPGA: Recv ZSGSRD 35845
17-03-18 01:46:03.310 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:03.310 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.310 -07 000000592 INF: FPGA: Recv ZSGSRD 35845
17-03-18 01:46:03.320 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.320 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.320 -07 000000592 INF: FPGA: Recv ZSGSRD 35841
17-03-18 01:46:03.330 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.330 -07 000000455 INF: FPGA: Recv ZSGSRD 35839
17-03-18 01:46:03.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.340 -07 000000455 INF: FPGA: Recv ZSGSRD 35847
17-03-18 01:46:03.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.350 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.350 -07 000000502 INF: FPGA: Recv ZSGSRD 35848
17-03-18 01:46:03.360 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.360 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.360 -07 000000611 INF: FPGA: Recv ZSGSRD 35840
17-03-18 01:46:03.370 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.370 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.370 -07 000000592 INF: FPGA: Recv ZSGSRD 35844
17-03-18 01:46:03.380 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.380 -07 000000461 INF: FPGA: Recv ZSGSRD 35844
17-03-18 01:46:03.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:03.390 -07 000000461 INF: FPGA: Recv ZSGSRD 35844
17-03-18 01:46:03.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.400 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:03.400 -07 000000592 INF: FPGA: Recv ZPIEZORD 31679
17-03-18 01:46:03.410 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:03.410 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.686 V. Piezo Error = -9.2 V.
17-03-18 01:46:03.410 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35844 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35844 (-169.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35839 (-169.7 uncal um), Max = 35848 (-169.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:46:03.410 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35844, posNoise = 4, negNoise = 5
17-03-18 01:46:03.410 -07 000000610 INF: Z Motor: After move to -0.170584, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:03.410 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 01:46:03.410 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:03.410 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:03.410 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:03.410 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:03.410 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:03.410 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:03.410 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:03.410 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:03.410 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:03.410 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:03.410 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 01:46:03.410 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:03.420 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:46:03.420 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:03.420 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:03.420 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:03.430 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:46:03.430 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 01:46:03.430 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:46:03.430 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 01:46:03.440 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37441 150\n [Camera]
17-03-18 01:46:03.640 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:04.030 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:04.030 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:04.030 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:04.030 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:04.030 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 01:46:04.030 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:04.030 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:04.030 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:04.030 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:04.030 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 01:46:04.220 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37441 778
17-03-18 01:46:04.370 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:04.400 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 01:46:04.400 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 01:46:04.400 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:04.410 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 01:46:04.410 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 01:46:04.410 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:04.410 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:04.410 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:04.410 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:46:04.420 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 01:46:04.560 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:04.560 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:04.560 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:04.560 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:04.560 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:04.560 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 01:46:04.560 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:04.560 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:04.560 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:04.560 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 01:46:04.750 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:04.750 -07 000000447 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:04.750 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37441 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall
17-03-18 01:46:04.750 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171172
17-03-18 01:46:04.750 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17117 mm
17-03-18 01:46:04.750 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:04.750 -07 000000585 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 01:46:04.750 -07 000000585 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 01:46:04.750 -07 000000585 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:04.760 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 37392, sync = True, waitForSettling = False)
17-03-18 01:46:04.760 -07 000000461 INF: Z Motor: Moving to -0.171170 mm, started at -0.170593 mm, distance = -0.58 um
17-03-18 01:46:04.760 -07 000000461 INF: FPGA: Xmit ZDACW 37392\n [Z Motor]
17-03-18 01:46:04.760 -07 000000447 INF: FPGA: Recv YRDPOS 127785
17-03-18 01:46:04.760 -07 000000585 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 01:46:04.760 -07 000000585 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:04.760 -07 000000585 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:04.760 -07 000000585 INF: Y Motor: Moving 1340 steps-16
17-03-18 01:46:04.760 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 01:46:04.770 -07 000000461 INF: FPGA: 'ZDACW 37392' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:04.770 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:04.770 -07 000000487 INF: FPGA: Recv ZDACR 37392
17-03-18 01:46:04.780 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:04.780 -07 000000461 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 01:46:04.780 -07 000000585 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:04.940 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 01:46:04.940 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:46:04.940 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:04.950 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 01:46:04.950 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 01:46:04.950 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:04.950 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:04.950 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:46:04.950 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 01:46:04.960 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 01:46:05.150 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 01:46:05.150 -07 000000585 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 01:46:05.200 -07 000000585 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:05.200 -07 000000461 INF: FPGA: Recv YRDPOS 129482
17-03-18 01:46:05.210 -07 000000585 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:05.210 -07 000000585 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:05.210 -07 000000585 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 01:46:05.210 -07 000000585 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.838 mm, average velocity = 2.120 mm/sec
17-03-18 01:46:06.160 -07 000000585 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:06.160 -07 000000487 INF: FPGA: Recv YRDPOS 129482
17-03-18 01:46:06.170 -07 000000585 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:06.170 -07 000000585 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:06.190 -07 000000585 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:06.190 -07 000000585 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:06.190 -07 000000585 INF: Y Motor: Moved to 63.2236 after 1438 ms (table move)
17-03-18 01:46:06.200 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171170 mm (DAC = 37392)
17-03-18 01:46:06.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.200 -07 000000608 INF: FPGA: Recv ZSGSRD 35934
17-03-18 01:46:06.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.210 -07 000000608 INF: FPGA: Recv ZSGSRD 35938
17-03-18 01:46:06.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.220 -07 000000462 INF: FPGA: Recv ZSGSRD 35932
17-03-18 01:46:06.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.230 -07 000000447 INF: FPGA: Recv ZSGSRD 35934
17-03-18 01:46:06.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.240 -07 000000455 INF: FPGA: Recv ZSGSRD 35935
17-03-18 01:46:06.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.250 -07 000000447 INF: FPGA: Recv ZSGSRD 35940
17-03-18 01:46:06.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.260 -07 000000455 INF: FPGA: Recv ZSGSRD 35934
17-03-18 01:46:06.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.270 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.270 -07 000000455 INF: FPGA: Recv ZSGSRD 35928
17-03-18 01:46:06.280 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.280 -07 000000455 INF: FPGA: Recv ZSGSRD 35935
17-03-18 01:46:06.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.290 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.290 -07 000000447 INF: FPGA: Recv ZSGSRD 35943
17-03-18 01:46:06.300 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.300 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:06.300 -07 000000455 INF: FPGA: Recv ZPIEZORD 31828
17-03-18 01:46:06.310 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.310 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.706 V. Piezo Error = -9.1 V.
17-03-18 01:46:06.310 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.2 um, Read 10 ADC samples: Avg = 35935 (-170.3 uncal um), Error = 0.9 uncal um, Median = 35934 (-170.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35928 (-170.3 uncal um), Max = 35943 (-170.4 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:46:06.310 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35935, posNoise = 8, negNoise = 7
17-03-18 01:46:06.310 -07 000000610 INF: Z Motor: After move to -0.171170, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:06.310 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 110 ms (allowed 150 ms), total time = 1550 ms
17-03-18 01:46:06.310 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:06.350 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 01:46:06.350 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:06.350 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.171177415325315. ----------
17-03-18 01:46:06.350 -07 000000610 INF: Cycle	91	Tile	5	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:06.350 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37216, sync = True, waitForSettling = True)
17-03-18 01:46:06.350 -07 000000610 INF: Z Motor: Moving to -0.170364 mm, started at -0.171177 mm, distance = 0.81 um
17-03-18 01:46:06.350 -07 000000610 INF: FPGA: Xmit ZDACW 37216\n [Z Motor]
17-03-18 01:46:06.350 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 01:46:06.360 -07 000000610 INF: FPGA: 'ZDACW 37216' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:06.360 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:06.360 -07 000000487 INF: FPGA: Recv ZDACR 37216
17-03-18 01:46:06.370 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.370 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:06.520 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.520 -07 000000461 INF: FPGA: Recv ZSGSRD 35807
17-03-18 01:46:06.530 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:06.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.530 -07 000000487 INF: FPGA: Recv ZSGSRD 35813
17-03-18 01:46:06.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.540 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.540 -07 000000608 INF: FPGA: Recv ZSGSRD 35809
17-03-18 01:46:06.550 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.550 -07 000000608 INF: FPGA: Recv ZSGSRD 35810
17-03-18 01:46:06.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.560 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.560 -07 000000487 INF: FPGA: Recv ZSGSRD 35813
17-03-18 01:46:06.570 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.570 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.570 -07 000000487 INF: FPGA: Recv ZSGSRD 35811
17-03-18 01:46:06.580 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.580 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.580 -07 000000608 INF: FPGA: Recv ZSGSRD 35806
17-03-18 01:46:06.590 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.590 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.590 -07 000000455 INF: FPGA: Recv ZSGSRD 35811
17-03-18 01:46:06.600 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.600 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.600 -07 000000462 INF: FPGA: Recv ZSGSRD 35801
17-03-18 01:46:06.610 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:06.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:06.610 -07 000000585 INF: FPGA: Recv ZSGSRD 35811
17-03-18 01:46:06.620 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.620 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:06.620 -07 000000462 INF: FPGA: Recv ZPIEZORD 31636
17-03-18 01:46:06.630 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:06.630 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.679 V. Piezo Error = -9.2 V.
17-03-18 01:46:06.630 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35809 (-169.5 uncal um), Error = 0.9 uncal um, Median = 35810 (-169.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35801 (-169.4 uncal um), Max = 35813 (-169.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:46:06.630 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35809, posNoise = 4, negNoise = 8
17-03-18 01:46:06.630 -07 000000610 INF: Z Motor: After move to -0.170364, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:06.630 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 01:46:06.630 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:06.630 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:06.630 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:06.630 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:06.630 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:06.630 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:06.630 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:06.630 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:06.630 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:46:06.630 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:06.630 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:06.630 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:06.630 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:06.630 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:06.640 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:46:06.640 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:06.640 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 01:46:06.640 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 01:46:06.640 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 01:46:06.640 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 01:46:06.650 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37392 150\n [Camera]
17-03-18 01:46:06.850 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:06.980 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.016692,
17-03-18 01:46:07.240 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:07.240 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:07.240 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:07.240 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:07.240 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 01:46:07.240 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:07.240 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:07.240 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:07.240 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:07.240 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 01:46:07.290 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:07.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:07.430 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37392 776
17-03-18 01:46:07.580 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:07.620 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:46:07.620 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 01:46:07.620 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:07.630 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:07.630 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 01:46:07.630 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 01:46:07.630 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:07.630 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:07.630 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:46:07.630 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 01:46:07.770 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:07.770 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:07.770 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:07.770 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:07.770 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 01:46:07.770 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:07.770 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:07.780 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:07.780 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:07.780 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 01:46:07.960 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:07.960 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:07.960 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37392 150' command took 2 ms to send, 1308 ms to get response, and 1313 ms overall
17-03-18 01:46:07.970 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170872
17-03-18 01:46:07.970 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17087 mm
17-03-18 01:46:07.970 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:07.970 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 37327, sync = True, waitForSettling = False)
17-03-18 01:46:07.970 -07 000000502 INF: Z Motor: Moving to -0.170872 mm, started at -0.170368 mm, distance = -0.50 um
17-03-18 01:46:07.970 -07 000000502 INF: FPGA: Xmit ZDACW 37327\n [Z Motor]
17-03-18 01:46:07.970 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 01:46:07.970 -07 000000608 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 01:46:07.970 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 01:46:07.980 -07 000000502 INF: FPGA: 'ZDACW 37327' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:07.980 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:07.980 -07 000000455 INF: FPGA: Recv YRDPOS 129482
17-03-18 01:46:07.990 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 01:46:07.990 -07 000000608 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:07.990 -07 000000608 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:07.990 -07 000000608 INF: Y Motor: Moving 1342 steps-18
17-03-18 01:46:07.990 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:07.990 -07 000000455 INF: FPGA: Recv ZDACR 37327
17-03-18 01:46:08.000 -07 000000502 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:08.000 -07 000000502 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 01:46:08.000 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:08.170 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 01:46:08.170 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 01:46:08.170 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:08.180 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 01:46:08.180 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:46:08.180 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:08.180 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:08.180 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 01:46:08.180 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:08.190 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 01:46:08.370 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 01:46:08.370 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 01:46:08.420 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:08.420 -07 000000590 INF: FPGA: Recv YRDPOS 131187
17-03-18 01:46:08.430 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:08.430 -07 000000608 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:08.430 -07 000000608 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-18 01:46:08.430 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.162 mm/sec
17-03-18 01:46:09.380 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:09.380 -07 000000480 INF: FPGA: Recv YRDPOS 131187
17-03-18 01:46:09.390 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:09.390 -07 000000608 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:09.410 -07 000000608 INF: Y Motor: After move to 64.062607, error = -0.006454, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:09.410 -07 000000608 INF: Y Motor: Position error after settling (table move) = -13 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:09.410 -07 000000608 INF: Y Motor: Moved to 64.0562 after 1441 ms (table move)
17-03-18 01:46:09.410 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170872 mm (DAC = 37327)
17-03-18 01:46:09.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.420 -07 000000455 INF: FPGA: Recv ZSGSRD 35886
17-03-18 01:46:09.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 5 ms to get response, and 6 ms overall
17-03-18 01:46:09.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.420 -07 000000608 INF: FPGA: Recv ZSGSRD 35892
17-03-18 01:46:09.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:46:09.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.430 -07 000000592 INF: FPGA: Recv ZSGSRD 35887
17-03-18 01:46:09.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.440 -07 000000608 INF: FPGA: Recv ZSGSRD 35895
17-03-18 01:46:09.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.450 -07 000000592 INF: FPGA: Recv ZSGSRD 35887
17-03-18 01:46:09.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.460 -07 000000608 INF: FPGA: Recv ZSGSRD 35890
17-03-18 01:46:09.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.470 -07 000000592 INF: FPGA: Recv ZSGSRD 35885
17-03-18 01:46:09.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.480 -07 000000608 INF: FPGA: Recv ZSGSRD 35884
17-03-18 01:46:09.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.490 -07 000000455 INF: FPGA: Recv ZSGSRD 35888
17-03-18 01:46:09.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.500 -07 000000608 INF: FPGA: Recv ZSGSRD 35892
17-03-18 01:46:09.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.510 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:09.510 -07 000000592 INF: FPGA: Recv ZPIEZORD 31781
17-03-18 01:46:09.520 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.520 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.696 V. Piezo Error = -9.1 V.
17-03-18 01:46:09.520 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.9 um, Read 10 ADC samples: Avg = 35889 (-170.0 uncal um), Error = 0.9 uncal um, Median = 35888 (-170.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35884 (-170.0 uncal um), Max = 35895 (-170.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:46:09.520 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35889, posNoise = 6, negNoise = 5
17-03-18 01:46:09.520 -07 000000610 INF: Z Motor: After move to -0.170872, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:09.520 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 101 ms (allowed 150 ms), total time = 1545 ms
17-03-18 01:46:09.520 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:09.570 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 01:46:09.570 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:09.570 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05615234375, Z-position -0.170881901566794. ----------
17-03-18 01:46:09.570 -07 000000610 INF: Cycle	91	Tile	6	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:09.570 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37150, sync = True, waitForSettling = True)
17-03-18 01:46:09.570 -07 000000610 INF: Z Motor: Moving to -0.170062 mm, started at -0.170882 mm, distance = 0.82 um
17-03-18 01:46:09.570 -07 000000610 INF: FPGA: Xmit ZDACW 37150\n [Z Motor]
17-03-18 01:46:09.570 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 01:46:09.580 -07 000000610 INF: FPGA: 'ZDACW 37150' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:46:09.580 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:09.580 -07 000000455 INF: FPGA: Recv ZDACR 37150
17-03-18 01:46:09.590 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.590 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:09.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.740 -07 000000480 INF: FPGA: Recv ZSGSRD 35767
17-03-18 01:46:09.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:09.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.750 -07 000000455 INF: FPGA: Recv ZSGSRD 35768
17-03-18 01:46:09.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.760 -07 000000502 INF: FPGA: Recv ZSGSRD 35768
17-03-18 01:46:09.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.770 -07 000000592 INF: FPGA: Recv ZSGSRD 35765
17-03-18 01:46:09.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.780 -07 000000502 INF: FPGA: Recv ZSGSRD 35764
17-03-18 01:46:09.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.790 -07 000000455 INF: FPGA: Recv ZSGSRD 35756
17-03-18 01:46:09.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.800 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.800 -07 000000608 INF: FPGA: Recv ZSGSRD 35766
17-03-18 01:46:09.810 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.810 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.810 -07 000000592 INF: FPGA: Recv ZSGSRD 35766
17-03-18 01:46:09.820 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.820 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.820 -07 000000608 INF: FPGA: Recv ZSGSRD 35762
17-03-18 01:46:09.830 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.830 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:09.830 -07 000000592 INF: FPGA: Recv ZSGSRD 35759
17-03-18 01:46:09.840 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.840 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:09.840 -07 000000480 INF: FPGA: Recv ZPIEZORD 31602
17-03-18 01:46:09.850 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:09.850 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.669 V. Piezo Error = -9.2 V.
17-03-18 01:46:09.850 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35764 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35766 (-169.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35756 (-169.2 uncal um), Max = 35768 (-169.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:46:09.850 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35764, posNoise = 4, negNoise = 8
17-03-18 01:46:09.850 -07 000000610 INF: Z Motor: After move to -0.170062, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:09.850 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:46:09.850 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:09.850 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:09.850 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:09.850 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:09.850 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:09.850 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:09.850 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:09.850 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:09.850 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 01:46:09.850 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:09.850 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 01:46:09.850 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:09.860 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:09.860 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:09.860 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:46:09.860 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:09.870 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 01:46:09.870 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:46:09.870 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 01:46:09.870 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 01:46:09.870 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37327 150\n [Camera]
17-03-18 01:46:10.070 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:10.460 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:10.460 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:10.460 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:10.460 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:10.460 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 01:46:10.470 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:10.470 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:10.470 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:10.470 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:10.470 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 01:46:10.660 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37327 776
17-03-18 01:46:10.810 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:10.860 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 01:46:10.860 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 01:46:10.860 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:10.870 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 01:46:10.870 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:46:10.870 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:10.870 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:10.870 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 01:46:10.870 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:10.880 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 01:46:11.000 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1116
17-03-18 01:46:11.000 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1116
17-03-18 01:46:11.000 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:11.000 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:11.000 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 01:46:11.000 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1116
17-03-18 01:46:11.000 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1116
17-03-18 01:46:11.000 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:11.000 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:11.000 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 01:46:11.190 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:11.190 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:11.190 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37327 150' command took 2 ms to send, 1311 ms to get response, and 1313 ms overall
17-03-18 01:46:11.190 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170627
17-03-18 01:46:11.190 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17063 mm
17-03-18 01:46:11.190 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:11.190 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 01:46:11.190 -07 000000447 INF: Y Motor: Moving to 64.8926 mm, started at 64.0562 mm, delta = 0.8365 mm
17-03-18 01:46:11.190 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:11.190 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 37273, sync = True, waitForSettling = False)
17-03-18 01:46:11.190 -07 000000592 INF: Z Motor: Moving to -0.170625 mm, started at -0.170079 mm, distance = -0.55 um
17-03-18 01:46:11.190 -07 000000502 INF: FPGA: Recv YRDPOS 131188
17-03-18 01:46:11.200 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:11.200 -07 000000447 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:11.200 -07 000000592 INF: FPGA: Xmit ZDACW 37273\n [Z Motor]
17-03-18 01:46:11.200 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 01:46:11.200 -07 000000447 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:11.200 -07 000000447 INF: Y Motor: Moving 1338 steps-13
17-03-18 01:46:11.210 -07 000000592 INF: FPGA: 'ZDACW 37273' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 01:46:11.210 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:11.220 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:11.220 -07 000000611 INF: FPGA: Recv ZDACR 37273
17-03-18 01:46:11.230 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:11.230 -07 000000592 INF: Z Motor: MoveAbsStepped took 33 ms (did NOT wait for settling yet))
17-03-18 01:46:11.390 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 01:46:11.390 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 01:46:11.390 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:11.390 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 01:46:11.390 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 01:46:11.390 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:11.390 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:11.390 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 01:46:11.390 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:11.400 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 01:46:11.580 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 01:46:11.580 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall
17-03-18 01:46:11.630 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:11.630 -07 000000462 INF: FPGA: Recv YRDPOS 132871
17-03-18 01:46:11.640 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:46:11.640 -07 000000447 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:11.640 -07 000000447 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 01:46:11.640 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.836 mm, average velocity = 2.184 mm/sec
17-03-18 01:46:12.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:12.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:12.340 -07 000000611 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.981281,
17-03-18 01:46:12.590 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:12.590 -07 000000592 INF: FPGA: Recv YRDPOS 132871
17-03-18 01:46:12.600 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:12.600 -07 000000447 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:12.620 -07 000000447 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:12.620 -07 000000447 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:12.620 -07 000000447 INF: Y Motor: Moved to 64.8784 after 1432 ms (table move)
17-03-18 01:46:12.630 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170625 mm (DAC = 37273)
17-03-18 01:46:12.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.630 -07 000000585 INF: FPGA: Recv ZSGSRD 35851
17-03-18 01:46:12.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.640 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.640 -07 000000447 INF: FPGA: Recv ZSGSRD 35856
17-03-18 01:46:12.650 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.650 -07 000000592 INF: FPGA: Recv ZSGSRD 35854
17-03-18 01:46:12.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.660 -07 000000592 INF: FPGA: Recv ZSGSRD 35852
17-03-18 01:46:12.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.670 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.670 -07 000000447 INF: FPGA: Recv ZSGSRD 35852
17-03-18 01:46:12.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.680 -07 000000447 INF: FPGA: Recv ZSGSRD 35853
17-03-18 01:46:12.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.690 -07 000000611 INF: FPGA: Recv ZSGSRD 35847
17-03-18 01:46:12.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.700 -07 000000447 INF: FPGA: Recv ZSGSRD 35845
17-03-18 01:46:12.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.710 -07 000000592 INF: FPGA: Recv ZSGSRD 35851
17-03-18 01:46:12.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.720 -07 000000447 INF: FPGA: Recv ZSGSRD 35851
17-03-18 01:46:12.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.730 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:12.730 -07 000000585 INF: FPGA: Recv ZPIEZORD 31757
17-03-18 01:46:12.740 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.740 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.687 V. Piezo Error = -9.0 V.
17-03-18 01:46:12.740 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35851 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35852 (-169.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35845 (-169.7 uncal um), Max = 35856 (-169.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:12.740 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35851, posNoise = 5, negNoise = 6
17-03-18 01:46:12.740 -07 000000610 INF: Z Motor: After move to -0.170625, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:12.740 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 111 ms (allowed 150 ms), total time = 1544 ms
17-03-18 01:46:12.740 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:12.780 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-18 01:46:12.780 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:12.780 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.170637781505407. ----------
17-03-18 01:46:12.780 -07 000000610 INF: Cycle	91	Tile	7	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:12.780 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37097, sync = True, waitForSettling = True)
17-03-18 01:46:12.780 -07 000000610 INF: Z Motor: Moving to -0.169819 mm, started at -0.170638 mm, distance = 0.82 um
17-03-18 01:46:12.780 -07 000000610 INF: FPGA: Xmit ZDACW 37097\n [Z Motor]
17-03-18 01:46:12.780 -07 000000585 INF: FPGA: Recv ZDACW
17-03-18 01:46:12.790 -07 000000610 INF: FPGA: 'ZDACW 37097' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:12.790 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:12.790 -07 000000611 INF: FPGA: Recv ZDACR 37097
17-03-18 01:46:12.800 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.800 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:12.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.950 -07 000000447 INF: FPGA: Recv ZSGSRD 35727
17-03-18 01:46:12.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:12.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.960 -07 000000611 INF: FPGA: Recv ZSGSRD 35733
17-03-18 01:46:12.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.970 -07 000000611 INF: FPGA: Recv ZSGSRD 35727
17-03-18 01:46:12.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.980 -07 000000592 INF: FPGA: Recv ZSGSRD 35726
17-03-18 01:46:12.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:12.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:12.990 -07 000000611 INF: FPGA: Recv ZSGSRD 35728
17-03-18 01:46:13.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:13.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:13.000 -07 000000585 INF: FPGA: Recv ZSGSRD 35725
17-03-18 01:46:13.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:13.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:13.010 -07 000000579 INF: FPGA: Recv ZSGSRD 35723
17-03-18 01:46:13.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:13.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:13.020 -07 000000447 INF: FPGA: Recv ZSGSRD 35723
17-03-18 01:46:13.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:13.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:13.030 -07 000000455 INF: FPGA: Recv ZSGSRD 35724
17-03-18 01:46:13.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:13.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:13.040 -07 000000585 INF: FPGA: Recv ZSGSRD 35730
17-03-18 01:46:13.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:13.050 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:13.050 -07 000000579 INF: FPGA: Recv ZPIEZORD 31562
17-03-18 01:46:13.060 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:13.060 -07 000000610 INF: Z Motor: Piezo is near 47.4 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.661 V. Piezo Error = -9.2 V.
17-03-18 01:46:13.060 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35727 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35726 (-169.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35723 (-168.9 uncal um), Max = 35733 (-169.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:13.060 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35727, posNoise = 6, negNoise = 4
17-03-18 01:46:13.060 -07 000000610 INF: Z Motor: After move to -0.169819, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:13.060 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 01:46:13.060 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:13.060 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:13.060 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:13.060 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:13.060 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:13.060 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:13.060 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:13.060 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:13.060 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:13.060 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:13.060 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:13.060 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:13.060 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:46:13.060 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:13.070 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:46:13.070 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:13.080 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:46:13.080 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 01:46:13.080 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:46:13.080 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:46:13.080 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37273 150\n [Camera]
17-03-18 01:46:13.280 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:13.670 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:13.680 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:13.680 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:13.680 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:13.680 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 01:46:13.680 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:13.680 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:13.680 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:13.680 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:13.680 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 01:46:13.870 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37273 776
17-03-18 01:46:14.020 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:14.050 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 01:46:14.050 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 01:46:14.050 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:14.050 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 01:46:14.050 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 01:46:14.050 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:14.060 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:14.060 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:46:14.060 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:14.070 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 01:46:14.210 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:14.210 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:14.210 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:14.210 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:14.210 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 01:46:14.210 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:14.210 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:14.210 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:14.210 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:14.210 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-18 01:46:14.400 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:46:14.400 -07 000000437 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:14.400 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37273 150' command took 2 ms to send, 1302 ms to get response, and 1313 ms overall
17-03-18 01:46:14.400 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 01:46:14.400 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87841796875, Z-Position -0.169841179199829. ------
17-03-18 01:46:14.410 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:14.410 -07 000000447 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17644 mm
17-03-18 01:46:14.410 -07 000000447 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:14.410 -07 000000480 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:14.410 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 01:46:14.410 -07 000000437 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 01:46:14.410 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 38543, sync = True, waitForSettling = False)
17-03-18 01:46:14.410 -07 000000480 INF: Z Motor: Moving to -0.176439 mm, started at -0.169841 mm, distance = -6.60 um
17-03-18 01:46:14.420 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:14.420 -07 000000480 INF: FPGA: Xmit ZDACW 38543\n [Z Motor]
17-03-18 01:46:14.420 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 01:46:14.430 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:14.430 -07 000000480 INF: FPGA: 'ZDACW 38543' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 01:46:14.430 -07 000000502 INF: FPGA: Recv YRDPOS 132871
17-03-18 01:46:14.440 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 01:46:14.440 -07 000000437 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:14.440 -07 000000437 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:14.440 -07 000000437 INF: Y Motor: Moving 1351 steps-29
17-03-18 01:46:14.440 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:46:14.450 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:14.450 -07 000000462 INF: FPGA: Recv ZDACR 38543
17-03-18 01:46:14.460 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:14.460 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:46:14.460 -07 000000480 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet))
17-03-18 01:46:14.590 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 01:46:14.590 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 01:46:14.590 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:14.590 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 01:46:14.590 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 01:46:14.590 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:14.600 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:14.600 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 01:46:14.600 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 01:46:14.610 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 01:46:14.640 -07 000000579 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:46:14.640 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 223 ms overall
17-03-18 01:46:14.830 -07 000000608 INF: FPGA: Recv YMVTILE
17-03-18 01:46:14.830 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:46:14.880 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:14.880 -07 000000461 INF: FPGA: Recv YRDPOS 134581
17-03-18 01:46:14.890 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:14.890 -07 000000437 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:14.890 -07 000000437 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 01:46:14.890 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.126 mm/sec
17-03-18 01:46:15.840 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:15.840 -07 000000461 INF: FPGA: Recv YRDPOS 134581
17-03-18 01:46:15.850 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:15.850 -07 000000437 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:15.880 -07 000000437 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:15.880 -07 000000437 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:15.880 -07 000000437 INF: Y Motor: Moved to 65.7134 after 1469 ms (table move)
17-03-18 01:46:15.880 -07 000000447 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176439 mm (DAC = 38543)
17-03-18 01:46:15.880 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.890 -07 000000480 INF: FPGA: Recv ZSGSRD 36758
17-03-18 01:46:15.890 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 01:46:15.890 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.890 -07 000000592 INF: FPGA: Recv ZSGSRD 36752
17-03-18 01:46:15.900 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:15.900 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.900 -07 000000590 INF: FPGA: Recv ZSGSRD 36756
17-03-18 01:46:15.910 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.910 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.910 -07 000000608 INF: FPGA: Recv ZSGSRD 36757
17-03-18 01:46:15.920 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.920 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.920 -07 000000487 INF: FPGA: Recv ZSGSRD 36750
17-03-18 01:46:15.930 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.930 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.930 -07 000000585 INF: FPGA: Recv ZSGSRD 36754
17-03-18 01:46:15.940 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.940 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.940 -07 000000480 INF: FPGA: Recv ZSGSRD 36753
17-03-18 01:46:15.950 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.950 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.950 -07 000000437 INF: FPGA: Recv ZSGSRD 36753
17-03-18 01:46:15.960 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.960 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.960 -07 000000461 INF: FPGA: Recv ZSGSRD 36760
17-03-18 01:46:15.970 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.970 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:15.970 -07 000000437 INF: FPGA: Recv ZSGSRD 36756
17-03-18 01:46:15.980 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.980 -07 000000447 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:15.980 -07 000000608 INF: FPGA: Recv ZPIEZORD 32960
17-03-18 01:46:15.990 -07 000000447 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:15.990 -07 000000447 INF: Z Motor: Piezo is near 50.4 V (nominally 0 to 100 V), expect near 58.8 V, since DAC is at 5.881 V. Piezo Error = -8.4 V.
17-03-18 01:46:15.990 -07 000000447 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.4 um, Read 10 ADC samples: Avg = 36755 (-175.6 uncal um), Error = 0.9 uncal um, Median = 36755 (-175.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36750 (-175.5 uncal um), Max = 36760 (-175.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:46:15.990 -07 000000447 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36755, posNoise = 5, negNoise = 5
17-03-18 01:46:15.990 -07 000000447 INF: Z Motor: After move to -0.176439, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:15.990 -07 000000447 INF: Z Motor: Settle wait time = 1472 ms, measure time = 102 ms (allowed 150 ms), total time = 1574 ms
17-03-18 01:46:15.990 -07 000000447 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:16.040 -07 000000447 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1627 ms
17-03-18 01:46:16.040 -07 000000447 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:16.040 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:16.040 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:16.040 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:16.040 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:16.040 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:46:16.040 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:16.040 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:16.040 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:46:16.050 -07 000000608 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:46:16.050 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:46:16.060 -07 000000608 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:46:16.060 -07 000000608 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 01:46:16.060 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:46:16.110 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:46:16.410 -07 000000592 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:46:16.410 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:46:16.410 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:46:16.410 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1188546832, 0x0, 559484976) start.
17-03-18 01:46:16.450 -07 000000455 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:46:16.450 -07 000000437 INF: FPGA: Recv CAMSNAP
17-03-18 01:46:16.450 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 01:46:16.530 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1188546832, 0x0, 559484976) end. Duration was 124 ms.
17-03-18 01:46:16.530 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:16.540 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 01:46:16.540 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms.
17-03-18 01:46:16.550 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:16.550 -07 000000480 INF: Autofocus start
17-03-18 01:46:16.550 -07 000000480 INF: MeasureProfile start
17-03-18 01:46:16.550 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:16.560 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:16.560 -07 000000487 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:46:16.560 -07 000000480 INF: MeasureProfile done
17-03-18 01:46:16.560 -07 000000480 INF: X=-16  Z correction [um]=-0.1496812
17-03-18 01:46:16.560 -07 000000480 INF: Autofocus finished
17-03-18 01:46:16.760 -07 000000461 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:46:16.760 -07 000000487 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:46:16.760 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.176445269281559. ----------
17-03-18 01:46:16.760 -07 000000610 INF: Cycle	91	Tile	8	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:16.770 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37023, sync = True, waitForSettling = True)
17-03-18 01:46:16.770 -07 000000610 INF: Z Motor: Moving to -0.169480 mm, started at -0.176445 mm, distance = 6.96 um
17-03-18 01:46:16.770 -07 000000610 INF: FPGA: Xmit ZDACW 37023\n [Z Motor]
17-03-18 01:46:16.770 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 01:46:16.780 -07 000000610 INF: FPGA: 'ZDACW 37023' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.780 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:16.780 -07 000000480 INF: FPGA: Recv ZDACR 37023
17-03-18 01:46:16.790 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.790 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:16.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:16.940 -07 000000480 INF: FPGA: Recv ZSGSRD 35666
17-03-18 01:46:16.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:16.950 -07 000000487 INF: FPGA: Recv ZSGSRD 35673
17-03-18 01:46:16.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:16.960 -07 000000480 INF: FPGA: Recv ZSGSRD 35675
17-03-18 01:46:16.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:16.970 -07 000000487 INF: FPGA: Recv ZSGSRD 35672
17-03-18 01:46:16.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:16.980 -07 000000461 INF: FPGA: Recv ZSGSRD 35669
17-03-18 01:46:16.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:16.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:16.990 -07 000000462 INF: FPGA: Recv ZSGSRD 35676
17-03-18 01:46:17.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:17.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:17.000 -07 000000487 INF: FPGA: Recv ZSGSRD 35672
17-03-18 01:46:17.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:17.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:17.010 -07 000000461 INF: FPGA: Recv ZSGSRD 35674
17-03-18 01:46:17.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:17.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:17.020 -07 000000480 INF: FPGA: Recv ZSGSRD 35670
17-03-18 01:46:17.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:17.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:17.030 -07 000000462 INF: FPGA: Recv ZSGSRD 35675
17-03-18 01:46:17.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:17.040 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:17.040 -07 000000461 INF: FPGA: Recv ZPIEZORD 31506
17-03-18 01:46:17.050 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:17.050 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.649 V. Piezo Error = -9.2 V.
17-03-18 01:46:17.050 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.5 um, Read 10 ADC samples: Avg = 35672 (-168.6 uncal um), Error = 0.9 uncal um, Median = 35672 (-168.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35666 (-168.6 uncal um), Max = 35676 (-168.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:17.050 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35672, posNoise = 4, negNoise = 6
17-03-18 01:46:17.050 -07 000000610 INF: Z Motor: After move to -0.169480, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:17.050 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 01:46:17.050 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:17.050 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:17.050 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:17.050 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:17.050 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:17.050 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:17.050 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:17.050 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:17.050 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:17.050 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:17.050 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:17.050 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:17.060 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:17.060 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:17.060 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:46:17.060 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:17.070 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 01:46:17.070 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:46:17.070 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:46:17.070 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 01:46:17.080 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37200 150\n [Camera]
17-03-18 01:46:17.280 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:17.290 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:17.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:17.670 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:17.670 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:17.670 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:17.670 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:17.670 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-18 01:46:17.670 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:17.670 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:17.670 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:17.670 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:17.670 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) start.
17-03-18 01:46:17.700 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.956714,
17-03-18 01:46:17.860 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37200 776
17-03-18 01:46:18.010 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:18.050 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 01:46:18.050 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 01:46:18.050 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:18.050 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 01:46:18.050 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 01:46:18.050 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:18.050 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:18.050 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:46:18.050 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:18.060 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 01:46:18.200 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:18.200 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:18.200 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:18.350 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:18.350 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:18.350 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:18.350 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:18.350 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:46:18.360 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:18.360 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 01:46:18.390 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:18.390 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:18.390 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37200 150' command took 2 ms to send, 1305 ms to get response, and 1313 ms overall
17-03-18 01:46:18.390 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.169841
17-03-18 01:46:18.390 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.16984 mm
17-03-18 01:46:18.390 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:18.390 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 01:46:18.390 -07 000000447 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 01:46:18.390 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:18.400 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 37102, sync = True, waitForSettling = False)
17-03-18 01:46:18.400 -07 000000611 INF: Z Motor: Moving to -0.169842 mm, started at -0.169488 mm, distance = -0.35 um
17-03-18 01:46:18.400 -07 000000487 INF: FPGA: Recv YRDPOS 134582
17-03-18 01:46:18.410 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:18.410 -07 000000447 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:18.410 -07 000000611 INF: FPGA: Xmit ZDACW 37102\n [Z Motor]
17-03-18 01:46:18.410 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 01:46:18.410 -07 000000447 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:18.410 -07 000000447 INF: Y Motor: Moving 1342 steps-19
17-03-18 01:46:18.420 -07 000000611 INF: FPGA: 'ZDACW 37102' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:18.420 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:18.430 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:18.430 -07 000000480 INF: FPGA: Recv ZDACR 37102
17-03-18 01:46:18.440 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:18.440 -07 000000611 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 01:46:18.740 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 389 ms.
17-03-18 01:46:18.750 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 01:46:18.750 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:18.750 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 01:46:18.750 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 01:46:18.750 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:18.750 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:18.750 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:18.750 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 552 ms.
17-03-18 01:46:18.760 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 01:46:18.800 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 01:46:18.800 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 384 ms overall
17-03-18 01:46:18.840 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:18.840 -07 000000462 INF: FPGA: Recv YRDPOS 136270
17-03-18 01:46:18.850 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:18.850 -07 000000447 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:18.850 -07 000000447 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 01:46:18.850 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.839 mm, average velocity = 2.185 mm/sec
17-03-18 01:46:19.800 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:19.800 -07 000000461 INF: FPGA: Recv YRDPOS 136271
17-03-18 01:46:19.810 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.810 -07 000000447 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:19.830 -07 000000447 INF: Y Motor: After move to 66.552605, error = -0.014030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:19.830 -07 000000447 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:46:19.830 -07 000000447 INF: Y Motor: Moved to 66.5386 after 1438 ms (table move)
17-03-18 01:46:19.840 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169842 mm (DAC = 37102)
17-03-18 01:46:19.840 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.840 -07 000000590 INF: FPGA: Recv ZSGSRD 35733
17-03-18 01:46:19.850 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.850 -07 000000447 INF: FPGA: Recv ZSGSRD 35730
17-03-18 01:46:19.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.860 -07 000000447 INF: FPGA: Recv ZSGSRD 35730
17-03-18 01:46:19.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.870 -07 000000611 INF: FPGA: Recv ZSGSRD 35733
17-03-18 01:46:19.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.880 -07 000000579 INF: FPGA: Recv ZSGSRD 35725
17-03-18 01:46:19.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.890 -07 000000608 INF: FPGA: Recv ZSGSRD 35727
17-03-18 01:46:19.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.900 -07 000000447 INF: FPGA: Recv ZSGSRD 35724
17-03-18 01:46:19.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.910 -07 000000579 INF: FPGA: Recv ZSGSRD 35725
17-03-18 01:46:19.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.920 -07 000000447 INF: FPGA: Recv ZSGSRD 35728
17-03-18 01:46:19.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:19.930 -07 000000579 INF: FPGA: Recv ZSGSRD 35729
17-03-18 01:46:19.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.940 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:19.940 -07 000000579 INF: FPGA: Recv ZPIEZORD 31605
17-03-18 01:46:19.950 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:19.950 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.661 V. Piezo Error = -9.1 V.
17-03-18 01:46:19.950 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35728 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35728 (-169.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35724 (-168.9 uncal um), Max = 35733 (-169.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:19.950 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35728, posNoise = 5, negNoise = 4
17-03-18 01:46:19.950 -07 000000610 INF: Z Motor: After move to -0.169842, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:19.950 -07 000000610 INF: Z Motor: Settle wait time = 1440 ms, measure time = 110 ms (allowed 150 ms), total time = 1550 ms
17-03-18 01:46:19.950 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:19.990 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 01:46:19.990 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:19.990 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53857421875, Z-position -0.16984760341197. ----------
17-03-18 01:46:19.990 -07 000000610 INF: Cycle	91	Tile	9	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:19.990 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36925, sync = True, waitForSettling = True)
17-03-18 01:46:19.990 -07 000000610 INF: Z Motor: Moving to -0.169032 mm, started at -0.169848 mm, distance = 0.82 um
17-03-18 01:46:19.990 -07 000000610 INF: FPGA: Xmit ZDACW 36925\n [Z Motor]
17-03-18 01:46:20.000 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 01:46:20.000 -07 000000610 INF: FPGA: 'ZDACW 36925' command took 0 ms to send, 1 ms to get response, and 6 ms overall
17-03-18 01:46:20.000 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:20.000 -07 000000462 INF: FPGA: Recv ZDACR 36925
17-03-18 01:46:20.010 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:20.010 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:20.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.160 -07 000000462 INF: FPGA: Recv ZSGSRD 35603
17-03-18 01:46:20.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:20.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.170 -07 000000462 INF: FPGA: Recv ZSGSRD 35605
17-03-18 01:46:20.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.180 -07 000000462 INF: FPGA: Recv ZSGSRD 35599
17-03-18 01:46:20.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.190 -07 000000487 INF: FPGA: Recv ZSGSRD 35604
17-03-18 01:46:20.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.200 -07 000000462 INF: FPGA: Recv ZSGSRD 35601
17-03-18 01:46:20.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.210 -07 000000462 INF: FPGA: Recv ZSGSRD 35594
17-03-18 01:46:20.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.220 -07 000000462 INF: FPGA: Recv ZSGSRD 35606
17-03-18 01:46:20.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.230 -07 000000608 INF: FPGA: Recv ZSGSRD 35600
17-03-18 01:46:20.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.240 -07 000000611 INF: FPGA: Recv ZSGSRD 35604
17-03-18 01:46:20.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:20.250 -07 000000608 INF: FPGA: Recv ZSGSRD 35602
17-03-18 01:46:20.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.260 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:20.260 -07 000000611 INF: FPGA: Recv ZPIEZORD 31418
17-03-18 01:46:20.270 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:20.270 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.634 V. Piezo Error = -9.2 V.
17-03-18 01:46:20.270 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.0 um, Read 10 ADC samples: Avg = 35602 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35602 (-168.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35594 (-168.1 uncal um), Max = 35606 (-168.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:46:20.270 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35602, posNoise = 4, negNoise = 8
17-03-18 01:46:20.270 -07 000000610 INF: Z Motor: After move to -0.169032, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:20.270 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:46:20.270 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:20.270 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:20.270 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:20.270 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:20.270 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:20.270 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:20.270 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:20.270 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:20.270 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:20.270 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:20.270 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:20.270 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:20.270 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:46:20.270 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:20.280 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:20.280 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:20.290 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:46:20.290 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:46:20.290 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:46:20.290 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:46:20.290 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37102 150\n [Camera]
17-03-18 01:46:20.500 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:20.890 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:20.890 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:20.890 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:20.890 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:20.890 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:20.890 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:20.890 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:20.890 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:46:20.890 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:20.890 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 01:46:21.080 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37102 776
17-03-18 01:46:21.230 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:21.260 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 01:46:21.260 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 01:46:21.260 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:21.270 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:21.270 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 01:46:21.270 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 01:46:21.270 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:21.270 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:21.270 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 01:46:21.270 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 01:46:21.420 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:21.420 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:21.420 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:21.530 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:21.530 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:21.530 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:21.540 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:21.540 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:46:21.540 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:21.540 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 01:46:21.610 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:46:21.610 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:21.610 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37102 150' command took 2 ms to send, 1303 ms to get response, and 1313 ms overall
17-03-18 01:46:21.610 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169904
17-03-18 01:46:21.610 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16990 mm
17-03-18 01:46:21.610 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:21.610 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 01:46:21.610 -07 000000579 INF: Y Motor: Moving to 67.3826 mm, started at 66.5386 mm, delta = 0.8440 mm
17-03-18 01:46:21.610 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:21.930 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 01:46:21.930 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 01:46:21.930 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:21.940 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 01:46:21.940 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 01:46:21.940 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:21.940 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:21.940 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 522 ms.
17-03-18 01:46:21.940 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:21.950 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 01:46:21.950 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 37115, sync = True, waitForSettling = False)
17-03-18 01:46:21.950 -07 000000461 INF: Z Motor: Moving to -0.169902 mm, started at -0.169038 mm, distance = -0.86 um
17-03-18 01:46:21.950 -07 000000461 INF: FPGA: Xmit ZDACW 37115\n [Z Motor]
17-03-18 01:46:21.960 -07 000000590 INF: FPGA: Recv YRDPOS 136271
17-03-18 01:46:21.960 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 01:46:21.960 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 341 ms to get response, and 343 ms overall
17-03-18 01:46:21.960 -07 000000579 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:21.960 -07 000000579 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:21.960 -07 000000579 INF: Y Motor: Moving 1350 steps-30
17-03-18 01:46:21.960 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:21.960 -07 000000461 INF: FPGA: 'ZDACW 37115' command took 0 ms to send, 1 ms to get response, and 6 ms overall
17-03-18 01:46:21.970 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:21.970 -07 000000590 INF: FPGA: Recv ZDACR 37115
17-03-18 01:46:21.980 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 01:46:21.980 -07 000000461 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 01:46:22.290 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:22.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:22.340 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 01:46:22.340 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 370 ms to get response, and 378 ms overall
17-03-18 01:46:22.380 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:22.380 -07 000000461 INF: FPGA: Recv YRDPOS 137976
17-03-18 01:46:22.390 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:22.390 -07 000000579 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:22.390 -07 000000579 INF: Y Motor: Position error before settling (table move) = -24 encoder counts (-0.012 mm)
17-03-18 01:46:22.390 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.233 mm/sec
17-03-18 01:46:23.060 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.962185,
17-03-18 01:46:23.340 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:23.340 -07 000000590 INF: FPGA: Recv YRDPOS 137977
17-03-18 01:46:23.350 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:23.350 -07 000000579 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:23.370 -07 000000579 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:23.370 -07 000000579 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:46:23.370 -07 000000579 INF: Y Motor: Moved to 67.3716 after 1759 ms (table move)
17-03-18 01:46:23.380 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169902 mm (DAC = 37115)
17-03-18 01:46:23.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.380 -07 000000590 INF: FPGA: Recv ZSGSRD 35746
17-03-18 01:46:23.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.390 -07 000000455 INF: FPGA: Recv ZSGSRD 35737
17-03-18 01:46:23.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.400 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.400 -07 000000579 INF: FPGA: Recv ZSGSRD 35729
17-03-18 01:46:23.410 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.410 -07 000000592 INF: FPGA: Recv ZSGSRD 35736
17-03-18 01:46:23.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.420 -07 000000455 INF: FPGA: Recv ZSGSRD 35739
17-03-18 01:46:23.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.430 -07 000000592 INF: FPGA: Recv ZSGSRD 35743
17-03-18 01:46:23.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.440 -07 000000461 INF: FPGA: Recv ZSGSRD 35740
17-03-18 01:46:23.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.450 -07 000000437 INF: FPGA: Recv ZSGSRD 35737
17-03-18 01:46:23.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.460 -07 000000461 INF: FPGA: Recv ZSGSRD 35741
17-03-18 01:46:23.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.470 -07 000000579 INF: FPGA: Recv ZSGSRD 35734
17-03-18 01:46:23.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.480 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:23.480 -07 000000461 INF: FPGA: Recv ZPIEZORD 31624
17-03-18 01:46:23.490 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.490 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.663 V. Piezo Error = -9.1 V.
17-03-18 01:46:23.490 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35738 (-169.0 uncal um), Error = 0.9 uncal um, Median = 35738 (-169.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35729 (-169.0 uncal um), Max = 35746 (-169.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 01:46:23.490 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35738, posNoise = 8, negNoise = 9
17-03-18 01:46:23.490 -07 000000610 INF: Z Motor: After move to -0.169902, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:23.490 -07 000000610 INF: Z Motor: Settle wait time = 1425 ms, measure time = 110 ms (allowed 150 ms), total time = 1535 ms
17-03-18 01:46:23.490 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:23.530 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1914 ms
17-03-18 01:46:23.530 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:23.530 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.169911845533388. ----------
17-03-18 01:46:23.530 -07 000000610 INF: Cycle	91	Tile	10	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:23.530 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36939, sync = True, waitForSettling = True)
17-03-18 01:46:23.530 -07 000000610 INF: Z Motor: Moving to -0.169096 mm, started at -0.169912 mm, distance = 0.82 um
17-03-18 01:46:23.530 -07 000000610 INF: FPGA: Xmit ZDACW 36939\n [Z Motor]
17-03-18 01:46:23.530 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 01:46:23.540 -07 000000610 INF: FPGA: 'ZDACW 36939' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:23.540 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:23.540 -07 000000585 INF: FPGA: Recv ZDACR 36939
17-03-18 01:46:23.550 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.550 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:23.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.700 -07 000000455 INF: FPGA: Recv ZSGSRD 35616
17-03-18 01:46:23.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.710 -07 000000461 INF: FPGA: Recv ZSGSRD 35615
17-03-18 01:46:23.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.720 -07 000000585 INF: FPGA: Recv ZSGSRD 35610
17-03-18 01:46:23.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.730 -07 000000461 INF: FPGA: Recv ZSGSRD 35609
17-03-18 01:46:23.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.740 -07 000000590 INF: FPGA: Recv ZSGSRD 35612
17-03-18 01:46:23.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.750 -07 000000461 INF: FPGA: Recv ZSGSRD 35615
17-03-18 01:46:23.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.760 -07 000000579 INF: FPGA: Recv ZSGSRD 35616
17-03-18 01:46:23.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.770 -07 000000461 INF: FPGA: Recv ZSGSRD 35614
17-03-18 01:46:23.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.780 -07 000000455 INF: FPGA: Recv ZSGSRD 35614
17-03-18 01:46:23.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:23.790 -07 000000590 INF: FPGA: Recv ZSGSRD 35610
17-03-18 01:46:23.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.800 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:23.800 -07 000000579 INF: FPGA: Recv ZPIEZORD 31421
17-03-18 01:46:23.810 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:23.810 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.637 V. Piezo Error = -9.2 V.
17-03-18 01:46:23.810 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35613 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35614 (-168.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35609 (-168.2 uncal um), Max = 35616 (-168.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:23.810 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35613, posNoise = 3, negNoise = 4
17-03-18 01:46:23.810 -07 000000610 INF: Z Motor: After move to -0.169096, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:23.810 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:46:23.810 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:23.810 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:23.810 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:23.810 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:23.810 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:23.810 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:23.810 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:23.810 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:23.810 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:23.810 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:23.810 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:23.810 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:23.820 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:23.820 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:23.820 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:46:23.820 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:23.820 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 01:46:23.820 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:46:23.830 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 01:46:23.830 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 01:46:23.830 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 37115 150\n [Camera]
17-03-18 01:46:24.030 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:24.430 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 587
17-03-18 01:46:24.430 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 587
17-03-18 01:46:24.430 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:24.430 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:24.430 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 01:46:24.430 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 587
17-03-18 01:46:24.430 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 587
17-03-18 01:46:24.430 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:24.430 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:24.430 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start.
17-03-18 01:46:24.620 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37115 776
17-03-18 01:46:24.760 -07 000000585 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:24.800 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 01:46:24.800 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 01:46:24.800 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:24.810 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:24.810 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 01:46:24.810 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 01:46:24.810 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:24.810 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:24.810 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:46:24.810 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 01:46:24.950 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:24.950 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:24.950 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:24.950 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:24.950 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 01:46:24.960 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:24.960 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:24.960 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:24.960 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:24.960 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 01:46:25.330 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 01:46:25.330 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:46:25.340 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:25.340 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:46:25.340 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 01:46:25.340 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:25.340 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:25.340 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 01:46:25.340 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:25.350 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 01:46:25.350 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:46:25.350 -07 000000590 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:25.350 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 37115 150' command took 2 ms to send, 1514 ms to get response, and 1517 ms overall
17-03-18 01:46:25.350 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169354
17-03-18 01:46:25.360 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16935 mm
17-03-18 01:46:25.360 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:25.360 -07 000000585 INF: Z Motor: Entering MoveAbsStepped (DAC = 36995, sync = True, waitForSettling = False)
17-03-18 01:46:25.360 -07 000000585 INF: Z Motor: Moving to -0.169352 mm, started at -0.169109 mm, distance = -0.24 um
17-03-18 01:46:25.360 -07 000000585 INF: FPGA: Xmit ZDACW 36995\n [Z Motor]
17-03-18 01:46:25.360 -07 000000590 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 01:46:25.360 -07 000000590 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 01:46:25.370 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:26.160 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 01:46:26.160 -07 000000611 INF: FPGA: Recv YRDPOS 137977
17-03-18 01:46:26.160 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 780 ms to get response, and 795 ms overall
17-03-18 01:46:26.160 -07 000000590 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:26.160 -07 000000590 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:26.160 -07 000000590 INF: Y Motor: Moving 1346 steps-24
17-03-18 01:46:26.160 -07 000000590 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:26.160 -07 000000585 INF: FPGA: 'ZDACW 36995' command took 0 ms to send, 790 ms to get response, and 796 ms overall
17-03-18 01:46:26.170 -07 000000585 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:26.170 -07 000000611 INF: FPGA: Recv ZDACR 36995
17-03-18 01:46:26.180 -07 000000585 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 01:46:26.180 -07 000000585 INF: Z Motor: MoveAbsStepped took 816 ms (did NOT wait for settling yet))
17-03-18 01:46:26.530 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 01:46:26.530 -07 000000590 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 01:46:26.580 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:26.580 -07 000000585 INF: FPGA: Recv YRDPOS 139683
17-03-18 01:46:26.590 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:26.590 -07 000000590 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:26.590 -07 000000590 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 01:46:26.590 -07 000000590 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.841 mm, average velocity = 2.225 mm/sec
17-03-18 01:46:27.290 -07 000000585 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:27.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:27.540 -07 000000590 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:27.540 -07 000000585 INF: FPGA: Recv YRDPOS 139683
17-03-18 01:46:27.550 -07 000000590 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:27.550 -07 000000590 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:27.570 -07 000000590 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:27.570 -07 000000590 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:27.570 -07 000000590 INF: Y Motor: Moved to 68.2046 after 2212 ms (table move)
17-03-18 01:46:27.570 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169352 mm (DAC = 36995)
17-03-18 01:46:27.570 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.580 -07 000000611 INF: FPGA: Recv ZSGSRD 35652
17-03-18 01:46:27.580 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 01:46:27.580 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.580 -07 000000611 INF: FPGA: Recv ZSGSRD 35654
17-03-18 01:46:27.590 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:27.590 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.590 -07 000000590 INF: FPGA: Recv ZSGSRD 35655
17-03-18 01:46:27.600 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.600 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.600 -07 000000590 INF: FPGA: Recv ZSGSRD 35656
17-03-18 01:46:27.610 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.610 -07 000000590 INF: FPGA: Recv ZSGSRD 35647
17-03-18 01:46:27.620 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.630 -07 000000611 INF: FPGA: Recv ZSGSRD 35662
17-03-18 01:46:27.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:27.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.650 -07 000000585 INF: FPGA: Recv ZSGSRD 35656
17-03-18 01:46:27.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:27.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.660 -07 000000611 INF: FPGA: Recv ZSGSRD 35656
17-03-18 01:46:27.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.690 -07 000000590 INF: FPGA: Recv ZSGSRD 35640
17-03-18 01:46:27.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:46:27.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.700 -07 000000502 INF: FPGA: Recv ZSGSRD 35647
17-03-18 01:46:27.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.720 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:27.720 -07 000000611 INF: FPGA: Recv ZPIEZORD 31504
17-03-18 01:46:27.730 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.645 V. Piezo Error = -9.1 V.
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35652 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35654 (-168.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 22 (0.1 uncal um), Min = 35640 (-168.4 uncal um), Max = 35662 (-168.6 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 12 (0.1 uncal um)
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35652, posNoise = 10, negNoise = 12
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: After move to -0.169352, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: Settle wait time = 2215 ms, measure time = 151 ms (allowed 150 ms), total time = 2366 ms
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 151 ms, longer than max expected time of 150 ms
17-03-18 01:46:27.730 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2369 ms
17-03-18 01:46:27.730 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:27.730 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.169359363289197. ----------
17-03-18 01:46:27.730 -07 000000610 INF: Cycle	91	Tile	11	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36819, sync = True, waitForSettling = True)
17-03-18 01:46:27.730 -07 000000610 INF: Z Motor: Moving to -0.168547 mm, started at -0.169359 mm, distance = 0.81 um
17-03-18 01:46:27.730 -07 000000610 INF: FPGA: Xmit ZDACW 36819\n [Z Motor]
17-03-18 01:46:27.730 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:46:27.740 -07 000000610 INF: FPGA: 'ZDACW 36819' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 01:46:27.740 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:27.740 -07 000000462 INF: FPGA: Recv ZDACR 36819
17-03-18 01:46:27.750 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.750 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:27.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.900 -07 000000447 INF: FPGA: Recv ZSGSRD 35539
17-03-18 01:46:27.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:27.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.910 -07 000000502 INF: FPGA: Recv ZSGSRD 35528
17-03-18 01:46:27.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.920 -07 000000447 INF: FPGA: Recv ZSGSRD 35529
17-03-18 01:46:27.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.930 -07 000000611 INF: FPGA: Recv ZSGSRD 35523
17-03-18 01:46:27.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.940 -07 000000447 INF: FPGA: Recv ZSGSRD 35531
17-03-18 01:46:27.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.950 -07 000000502 INF: FPGA: Recv ZSGSRD 35537
17-03-18 01:46:27.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.960 -07 000000447 INF: FPGA: Recv ZSGSRD 35525
17-03-18 01:46:27.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.970 -07 000000590 INF: FPGA: Recv ZSGSRD 35528
17-03-18 01:46:27.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.980 -07 000000611 INF: FPGA: Recv ZSGSRD 35531
17-03-18 01:46:27.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:27.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:27.990 -07 000000590 INF: FPGA: Recv ZSGSRD 35528
17-03-18 01:46:28.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:28.000 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:28.000 -07 000000462 INF: FPGA: Recv ZPIEZORD 31326
17-03-18 01:46:28.010 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:28.010 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.618 V. Piezo Error = -9.3 V.
17-03-18 01:46:28.010 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.5 um, Read 10 ADC samples: Avg = 35530 (-167.7 uncal um), Error = 0.8 uncal um, Median = 35528 (-167.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35523 (-167.7 uncal um), Max = 35539 (-167.8 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:46:28.010 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35530, posNoise = 9, negNoise = 7
17-03-18 01:46:28.010 -07 000000610 INF: Z Motor: After move to -0.168547, error = -0.000029, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:28.010 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:46:28.010 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:28.010 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:28.010 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:28.010 -07 000000585 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:28.010 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:28.010 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:28.010 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:28.010 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:28.010 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:28.010 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:28.010 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:28.010 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:28.020 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:46:28.020 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:28.020 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:28.020 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:28.030 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 01:46:28.030 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 01:46:28.030 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 01:46:28.030 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 01:46:28.030 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36995 150\n [Camera]
17-03-18 01:46:28.230 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:28.420 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.983999,
17-03-18 01:46:28.620 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:28.620 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:28.620 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:28.620 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:28.620 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 01:46:28.630 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:28.630 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:28.630 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:28.750 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:28.750 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:46:28.810 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36995 776
17-03-18 01:46:28.960 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:29.020 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 01:46:29.020 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 01:46:29.020 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:29.020 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:29.020 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 01:46:29.130 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:46:29.130 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 01:46:29.130 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:29.130 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:29.130 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 01:46:29.150 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:29.150 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:29.150 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:29.150 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:29.150 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:29.160 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:29.160 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:29.160 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:46:29.160 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:29.160 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:46:29.340 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:46:29.340 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:29.340 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36995 150' command took 2 ms to send, 1308 ms to get response, and 1314 ms overall
17-03-18 01:46:29.350 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 01:46:29.350 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20458984375, Z-Position -0.168575609407902. ------
17-03-18 01:46:29.350 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:29.350 -07 000000447 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.17507 mm
17-03-18 01:46:29.350 -07 000000447 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:29.350 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:29.350 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 01:46:29.350 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 38243, sync = True, waitForSettling = False)
17-03-18 01:46:29.350 -07 000000608 INF: Z Motor: Moving to -0.175065 mm, started at -0.168576 mm, distance = -6.49 um
17-03-18 01:46:29.350 -07 000000487 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 01:46:29.360 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:29.360 -07 000000608 INF: FPGA: Xmit ZDACW 38243\n [Z Motor]
17-03-18 01:46:29.360 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 01:46:29.370 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:29.370 -07 000000608 INF: FPGA: 'ZDACW 38243' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:29.370 -07 000000467 INF: FPGA: Recv YRDPOS 139683
17-03-18 01:46:29.380 -07 000000480 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:46:29.380 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 20 ms overall
17-03-18 01:46:29.380 -07 000000487 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:29.380 -07 000000487 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:29.380 -07 000000487 INF: Y Motor: Moving 1341 steps-16
17-03-18 01:46:29.390 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:29.390 -07 000000592 INF: FPGA: Recv ZDACR 38243
17-03-18 01:46:29.400 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:29.400 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:46:29.400 -07 000000608 INF: Z Motor: MoveAbsStepped took 41 ms (did NOT wait for settling yet))
17-03-18 01:46:29.550 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 01:46:29.550 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 01:46:29.550 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:29.550 -07 000000585 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 01:46:29.550 -07 000000585 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 01:46:29.550 -07 000000585 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:29.560 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:29.560 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 01:46:29.560 -07 000000585 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:29.570 -07 000000585 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 01:46:30.210 -07 000000467 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:46:30.210 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 01:46:30.210 -07 000000480 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 820 ms to get response, and 850 ms overall
17-03-18 01:46:30.210 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 800 ms to get response, and 829 ms overall
17-03-18 01:46:30.250 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:30.250 -07 000000611 INF: FPGA: Recv YRDPOS 141367
17-03-18 01:46:30.260 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:30.260 -07 000000487 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:30.260 -07 000000487 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm)
17-03-18 01:46:30.260 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 830 ms, distance = 0.838 mm, average velocity = 1.010 mm/sec
17-03-18 01:46:31.210 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:31.210 -07 000000462 INF: FPGA: Recv YRDPOS 141367
17-03-18 01:46:31.220 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:31.220 -07 000000487 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:31.250 -07 000000487 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:31.250 -07 000000487 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:31.250 -07 000000487 INF: Y Motor: Moved to 69.0269 after 1895 ms (table move)
17-03-18 01:46:31.250 -07 000000447 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175065 mm (DAC = 38243)
17-03-18 01:46:31.250 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.260 -07 000000608 INF: FPGA: Recv ZSGSRD 36545
17-03-18 01:46:31.260 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 01:46:31.260 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.260 -07 000000462 INF: FPGA: Recv ZSGSRD 36539
17-03-18 01:46:31.270 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:31.270 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.270 -07 000000608 INF: FPGA: Recv ZSGSRD 36542
17-03-18 01:46:31.280 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.280 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.280 -07 000000467 INF: FPGA: Recv ZSGSRD 36539
17-03-18 01:46:31.290 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.290 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.290 -07 000000579 INF: FPGA: Recv ZSGSRD 36543
17-03-18 01:46:31.300 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.300 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.300 -07 000000462 INF: FPGA: Recv ZSGSRD 36540
17-03-18 01:46:31.310 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.310 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.310 -07 000000579 INF: FPGA: Recv ZSGSRD 36544
17-03-18 01:46:31.320 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.320 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.320 -07 000000462 INF: FPGA: Recv ZSGSRD 36541
17-03-18 01:46:31.330 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.330 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.330 -07 000000467 INF: FPGA: Recv ZSGSRD 36538
17-03-18 01:46:31.340 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.340 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:31.340 -07 000000462 INF: FPGA: Recv ZSGSRD 36538
17-03-18 01:46:31.350 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.350 -07 000000447 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:31.350 -07 000000455 INF: FPGA: Recv ZPIEZORD 32642
17-03-18 01:46:31.360 -07 000000447 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:31.360 -07 000000447 INF: Z Motor: Piezo is near 49.7 V (nominally 0 to 100 V), expect near 58.4 V, since DAC is at 5.836 V. Piezo Error = -8.6 V.
17-03-18 01:46:31.360 -07 000000447 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.1 um, Read 10 ADC samples: Avg = 36541 (-174.2 uncal um), Error = 0.9 uncal um, Median = 36540 (-174.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 36538 (-174.2 uncal um), Max = 36545 (-174.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 01:46:31.360 -07 000000447 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36541, posNoise = 4, negNoise = 3
17-03-18 01:46:31.360 -07 000000447 INF: Z Motor: After move to -0.175065, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:31.360 -07 000000447 INF: Z Motor: Settle wait time = 1899 ms, measure time = 102 ms (allowed 150 ms), total time = 2001 ms
17-03-18 01:46:31.360 -07 000000447 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:31.410 -07 000000447 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2055 ms
17-03-18 01:46:31.410 -07 000000447 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:31.410 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:31.410 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:31.410 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:31.410 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:31.410 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:46:31.410 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:31.410 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:46:31.410 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:46:31.420 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:46:31.420 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:46:31.420 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 01:46:31.420 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms.
17-03-18 01:46:31.430 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:46:31.470 -07 000000467 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:46:31.770 -07 000000447 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:46:31.770 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:46:31.770 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:46:31.780 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) start.
17-03-18 01:46:31.810 -07 000000455 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:46:31.810 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 01:46:31.810 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall
17-03-18 01:46:31.900 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1424593000, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 01:46:31.900 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:31.900 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 01:46:31.900 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 01:46:32.010 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:32.010 -07 000000611 INF: Autofocus start
17-03-18 01:46:32.010 -07 000000611 INF: MeasureProfile start
17-03-18 01:46:32.010 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:32.020 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:32.020 -07 000000462 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:46:32.020 -07 000000611 INF: MeasureProfile done
17-03-18 01:46:32.020 -07 000000611 INF: X=32  Z correction [um]=0.09220707
17-03-18 01:46:32.020 -07 000000611 INF: Autofocus finished
17-03-18 01:46:32.220 -07 000000608 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:46:32.220 -07 000000462 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:46:32.220 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.175070487883222. ----------
17-03-18 01:46:32.220 -07 000000610 INF: Cycle	91	Tile	12	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:32.230 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36776, sync = True, waitForSettling = True)
17-03-18 01:46:32.230 -07 000000610 INF: Z Motor: Moving to -0.168350 mm, started at -0.175070 mm, distance = 6.72 um
17-03-18 01:46:32.230 -07 000000610 INF: FPGA: Xmit ZDACW 36776\n [Z Motor]
17-03-18 01:46:32.230 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 01:46:32.240 -07 000000610 INF: FPGA: 'ZDACW 36776' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.240 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:32.240 -07 000000592 INF: FPGA: Recv ZDACR 36776
17-03-18 01:46:32.250 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.250 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:32.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:32.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:32.400 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.400 -07 000000437 INF: FPGA: Recv ZSGSRD 35493
17-03-18 01:46:32.410 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.410 -07 000000579 INF: FPGA: Recv ZSGSRD 35497
17-03-18 01:46:32.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.420 -07 000000591 INF: FPGA: Recv ZSGSRD 35494
17-03-18 01:46:32.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.430 -07 000000487 INF: FPGA: Recv ZSGSRD 35499
17-03-18 01:46:32.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.440 -07 000000480 INF: FPGA: Recv ZSGSRD 35495
17-03-18 01:46:32.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.450 -07 000000455 INF: FPGA: Recv ZSGSRD 35497
17-03-18 01:46:32.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.460 -07 000000461 INF: FPGA: Recv ZSGSRD 35499
17-03-18 01:46:32.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.470 -07 000000455 INF: FPGA: Recv ZSGSRD 35499
17-03-18 01:46:32.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.480 -07 000000461 INF: FPGA: Recv ZSGSRD 35495
17-03-18 01:46:32.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:32.490 -07 000000455 INF: FPGA: Recv ZSGSRD 35500
17-03-18 01:46:32.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.500 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:32.500 -07 000000461 INF: FPGA: Recv ZPIEZORD 31241
17-03-18 01:46:32.510 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:32.510 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.612 V. Piezo Error = -9.4 V.
17-03-18 01:46:32.510 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.3 um, Read 10 ADC samples: Avg = 35497 (-167.5 uncal um), Error = 0.9 uncal um, Median = 35497 (-167.5 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35493 (-167.5 uncal um), Max = 35500 (-167.5 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:32.510 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35497, posNoise = 3, negNoise = 4
17-03-18 01:46:32.510 -07 000000610 INF: Z Motor: After move to -0.168350, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:32.510 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 01:46:32.510 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:32.510 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:32.510 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:32.510 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:32.510 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:32.510 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:32.510 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:32.510 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:32.510 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:46:32.510 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:32.510 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 01:46:32.510 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:32.520 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 01:46:32.520 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:32.520 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:46:32.520 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:32.530 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 01:46:32.530 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 01:46:32.530 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 01:46:32.530 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:46:32.530 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36952 150\n [Camera]
17-03-18 01:46:32.730 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:33.130 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:33.130 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:33.130 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:33.130 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:33.130 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start.
17-03-18 01:46:33.130 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:33.130 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:33.130 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:33.130 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:33.130 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) start.
17-03-18 01:46:33.320 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36952 776
17-03-18 01:46:33.470 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:33.530 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 01:46:33.530 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 01:46:33.530 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:33.530 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:33.530 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:46:33.530 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1165594328, 0x0, 418435064) end. Duration was 404 ms.
17-03-18 01:46:33.530 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-18 01:46:33.530 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:33.540 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:33.540 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 01:46:33.660 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:33.660 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:33.660 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:33.770 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:33.770 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:33.770 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:33.770 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:33.770 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 01:46:33.780 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.047997,
17-03-18 01:46:33.780 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:33.780 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:46:33.850 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:33.850 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:33.850 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36952 150' command took 2 ms to send, 1301 ms to get response, and 1313 ms overall
17-03-18 01:46:33.850 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168856
17-03-18 01:46:33.850 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16886 mm
17-03-18 01:46:33.850 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:33.850 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 01:46:33.850 -07 000000462 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm
17-03-18 01:46:33.850 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:33.850 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 36887, sync = True, waitForSettling = False)
17-03-18 01:46:33.850 -07 000000592 INF: Z Motor: Moving to -0.168858 mm, started at -0.168364 mm, distance = -0.49 um
17-03-18 01:46:33.850 -07 000000461 INF: FPGA: Recv YRDPOS 141367
17-03-18 01:46:33.860 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:46:33.860 -07 000000592 INF: FPGA: Xmit ZDACW 36887\n [Z Motor]
17-03-18 01:46:33.860 -07 000000462 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:33.860 -07 000000462 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:33.860 -07 000000462 INF: Y Motor: Moving 1353 steps-32
17-03-18 01:46:33.860 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 01:46:33.870 -07 000000592 INF: FPGA: 'ZDACW 36887' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 01:46:33.870 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:33.870 -07 000000608 INF: FPGA: Recv ZDACR 36887
17-03-18 01:46:33.880 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:33.880 -07 000000592 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 01:46:33.880 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:34.170 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 01:46:34.170 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 01:46:34.170 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:34.180 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 404 ms.
17-03-18 01:46:34.180 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 01:46:34.180 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:34.180 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:34.180 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:34.180 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms.
17-03-18 01:46:34.190 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 01:46:34.250 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-18 01:46:34.250 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:46:34.300 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:34.300 -07 000000461 INF: FPGA: Recv YRDPOS 143078
17-03-18 01:46:34.310 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:34.310 -07 000000462 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:34.310 -07 000000462 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 01:46:34.310 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.130 mm/sec
17-03-18 01:46:35.260 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:35.260 -07 000000461 INF: FPGA: Recv YRDPOS 143079
17-03-18 01:46:35.270 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.270 -07 000000462 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:35.290 -07 000000462 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:35.290 -07 000000462 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:46:35.290 -07 000000462 INF: Y Motor: Moved to 69.8628 after 1442 ms (table move)
17-03-18 01:46:35.300 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168858 mm (DAC = 36887)
17-03-18 01:46:35.300 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.300 -07 000000447 INF: FPGA: Recv ZSGSRD 35574
17-03-18 01:46:35.310 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:35.310 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.310 -07 000000591 INF: FPGA: Recv ZSGSRD 35583
17-03-18 01:46:35.320 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.320 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.320 -07 000000461 INF: FPGA: Recv ZSGSRD 35580
17-03-18 01:46:35.330 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.330 -07 000000467 INF: FPGA: Recv ZSGSRD 35577
17-03-18 01:46:35.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.340 -07 000000579 INF: FPGA: Recv ZSGSRD 35580
17-03-18 01:46:35.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.350 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.350 -07 000000447 INF: FPGA: Recv ZSGSRD 35573
17-03-18 01:46:35.360 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.360 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.360 -07 000000579 INF: FPGA: Recv ZSGSRD 35570
17-03-18 01:46:35.370 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.370 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.370 -07 000000611 INF: FPGA: Recv ZSGSRD 35575
17-03-18 01:46:35.380 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.380 -07 000000437 INF: FPGA: Recv ZSGSRD 35578
17-03-18 01:46:35.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.390 -07 000000592 INF: FPGA: Recv ZSGSRD 35579
17-03-18 01:46:35.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.400 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:35.400 -07 000000591 INF: FPGA: Recv ZPIEZORD 31355
17-03-18 01:46:35.410 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.410 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.629 V. Piezo Error = -9.3 V.
17-03-18 01:46:35.410 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35577 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35578 (-168.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35570 (-168.0 uncal um), Max = 35583 (-168.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:46:35.410 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35577, posNoise = 6, negNoise = 7
17-03-18 01:46:35.410 -07 000000610 INF: Z Motor: After move to -0.168858, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:35.410 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 111 ms (allowed 150 ms), total time = 1555 ms
17-03-18 01:46:35.410 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:35.450 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1595 ms
17-03-18 01:46:35.450 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:35.450 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.168877547378565. ----------
17-03-18 01:46:35.450 -07 000000610 INF: Cycle	91	Tile	13	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:35.450 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36710, sync = True, waitForSettling = True)
17-03-18 01:46:35.450 -07 000000610 INF: Z Motor: Moving to -0.168048 mm, started at -0.168878 mm, distance = 0.83 um
17-03-18 01:46:35.450 -07 000000610 INF: FPGA: Xmit ZDACW 36710\n [Z Motor]
17-03-18 01:46:35.450 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 01:46:35.460 -07 000000610 INF: FPGA: 'ZDACW 36710' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:35.460 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:35.460 -07 000000480 INF: FPGA: Recv ZDACR 36710
17-03-18 01:46:35.470 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.470 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:35.620 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.620 -07 000000487 INF: FPGA: Recv ZSGSRD 35451
17-03-18 01:46:35.630 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:35.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.630 -07 000000480 INF: FPGA: Recv ZSGSRD 35450
17-03-18 01:46:35.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.640 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.640 -07 000000591 INF: FPGA: Recv ZSGSRD 35447
17-03-18 01:46:35.650 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.650 -07 000000487 INF: FPGA: Recv ZSGSRD 35450
17-03-18 01:46:35.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.660 -07 000000480 INF: FPGA: Recv ZSGSRD 35445
17-03-18 01:46:35.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.670 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.670 -07 000000579 INF: FPGA: Recv ZSGSRD 35446
17-03-18 01:46:35.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.680 -07 000000487 INF: FPGA: Recv ZSGSRD 35448
17-03-18 01:46:35.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.690 -07 000000611 INF: FPGA: Recv ZSGSRD 35448
17-03-18 01:46:35.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.700 -07 000000480 INF: FPGA: Recv ZSGSRD 35445
17-03-18 01:46:35.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:35.710 -07 000000592 INF: FPGA: Recv ZSGSRD 35448
17-03-18 01:46:35.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.720 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:35.720 -07 000000487 INF: FPGA: Recv ZPIEZORD 31196
17-03-18 01:46:35.730 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:35.730 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.602 V. Piezo Error = -9.4 V.
17-03-18 01:46:35.730 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35448 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35448 (-167.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35445 (-167.2 uncal um), Max = 35451 (-167.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 01:46:35.730 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35448, posNoise = 3, negNoise = 3
17-03-18 01:46:35.730 -07 000000610 INF: Z Motor: After move to -0.168048, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:35.730 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 01:46:35.730 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:35.730 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:35.730 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:35.730 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:35.730 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:35.730 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:35.730 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:35.730 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:35.730 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:35.730 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:35.730 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:35.730 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:35.740 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:46:35.740 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:35.740 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:46:35.740 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:35.750 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 01:46:35.750 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 01:46:35.750 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 01:46:35.750 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:46:35.750 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36887 150\n [Camera]
17-03-18 01:46:35.950 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:36.340 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:36.340 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:36.340 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:36.340 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:36.340 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1439269080, 0x0, 391868352) start.
17-03-18 01:46:36.340 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:36.340 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:36.340 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:36.340 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:36.340 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1474691344, 0x0, 418435064) start.
17-03-18 01:46:36.530 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36887 776
17-03-18 01:46:36.680 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:36.740 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1439269080, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 01:46:36.740 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 01:46:36.740 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:36.740 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1474691344, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 01:46:36.740 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 01:46:36.740 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:36.740 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:36.740 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:46:36.750 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:36.750 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms.
17-03-18 01:46:36.870 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:36.870 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:36.870 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:36.870 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:36.870 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 01:46:36.870 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:36.870 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:36.870 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:36.870 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:36.870 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 01:46:37.060 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:37.060 -07 000000447 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:37.060 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36887 150' command took 2 ms to send, 1307 ms to get response, and 1313 ms overall
17-03-18 01:46:37.060 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.168072
17-03-18 01:46:37.060 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16807 mm
17-03-18 01:46:37.060 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:37.180 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 01:46:37.180 -07 000000467 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm
17-03-18 01:46:37.180 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:37.180 -07 000000487 INF: Z Motor: Entering MoveAbsStepped (DAC = 36715, sync = True, waitForSettling = False)
17-03-18 01:46:37.180 -07 000000487 INF: Z Motor: Moving to -0.168070 mm, started at -0.168049 mm, distance = -0.02 um
17-03-18 01:46:37.190 -07 000000487 INF: FPGA: Xmit ZDACW 36715\n [Z Motor]
17-03-18 01:46:37.190 -07 000000447 INF: FPGA: Recv YRDPOS 143079
17-03-18 01:46:37.190 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 01:46:37.190 -07 000000467 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:37.190 -07 000000467 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:37.190 -07 000000467 INF: Y Motor: Moving 1344 steps-21
17-03-18 01:46:37.190 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 01:46:37.200 -07 000000487 INF: FPGA: 'ZDACW 36715' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 01:46:37.200 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:37.210 -07 000000487 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:37.210 -07 000000447 INF: FPGA: Recv ZDACR 36715
17-03-18 01:46:37.220 -07 000000487 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:37.220 -07 000000487 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 01:46:37.270 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 01:46:37.270 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:46:37.270 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:37.270 -07 000000437 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 01:46:37.270 -07 000000437 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:46:37.270 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:37.280 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:37.280 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 01:46:37.280 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:37.290 -07 000000437 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 01:46:37.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:37.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:37.580 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-18 01:46:37.580 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 389 ms overall
17-03-18 01:46:37.620 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:37.620 -07 000000447 INF: FPGA: Recv YRDPOS 144768
17-03-18 01:46:37.630 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:37.630 -07 000000467 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:37.630 -07 000000467 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 01:46:37.630 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.840 mm, average velocity = 2.159 mm/sec
17-03-18 01:46:38.580 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:38.580 -07 000000611 INF: FPGA: Recv YRDPOS 144768
17-03-18 01:46:38.590 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:38.590 -07 000000467 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:38.610 -07 000000467 INF: Y Motor: After move to 70.702606, error = -0.015106, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:38.610 -07 000000467 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:38.610 -07 000000467 INF: Y Motor: Moved to 70.6875 after 1429 ms (table move)
17-03-18 01:46:38.610 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168070 mm (DAC = 36715)
17-03-18 01:46:38.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.620 -07 000000461 INF: FPGA: Recv ZSGSRD 35454
17-03-18 01:46:38.630 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:38.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.630 -07 000000467 INF: FPGA: Recv ZSGSRD 35451
17-03-18 01:46:38.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.640 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.640 -07 000000592 INF: FPGA: Recv ZSGSRD 35449
17-03-18 01:46:38.650 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.650 -07 000000467 INF: FPGA: Recv ZSGSRD 35452
17-03-18 01:46:38.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.660 -07 000000608 INF: FPGA: Recv ZSGSRD 35450
17-03-18 01:46:38.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.670 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.670 -07 000000461 INF: FPGA: Recv ZSGSRD 35459
17-03-18 01:46:38.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.680 -07 000000591 INF: FPGA: Recv ZSGSRD 35450
17-03-18 01:46:38.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.690 -07 000000437 INF: FPGA: Recv ZSGSRD 35456
17-03-18 01:46:38.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.700 -07 000000480 INF: FPGA: Recv ZSGSRD 35454
17-03-18 01:46:38.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.710 -07 000000467 INF: FPGA: Recv ZSGSRD 35452
17-03-18 01:46:38.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.720 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:38.720 -07 000000480 INF: FPGA: Recv ZPIEZORD 31214
17-03-18 01:46:38.730 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.730 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.602 V. Piezo Error = -9.3 V.
17-03-18 01:46:38.730 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.1 um, Read 10 ADC samples: Avg = 35453 (-167.2 uncal um), Error = 0.9 uncal um, Median = 35452 (-167.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35449 (-167.2 uncal um), Max = 35459 (-167.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:38.730 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35453, posNoise = 6, negNoise = 4
17-03-18 01:46:38.730 -07 000000610 INF: Z Motor: After move to -0.168070, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:38.730 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 111 ms (allowed 150 ms), total time = 1542 ms
17-03-18 01:46:38.730 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:38.770 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1700 ms
17-03-18 01:46:38.770 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:38.770 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6875, Z-position -0.168080945072986. ----------
17-03-18 01:46:38.770 -07 000000610 INF: Cycle	91	Tile	14	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:38.770 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36539, sync = True, waitForSettling = True)
17-03-18 01:46:38.770 -07 000000610 INF: Z Motor: Moving to -0.167265 mm, started at -0.168081 mm, distance = 0.82 um
17-03-18 01:46:38.770 -07 000000610 INF: FPGA: Xmit ZDACW 36539\n [Z Motor]
17-03-18 01:46:38.770 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 01:46:38.780 -07 000000610 INF: FPGA: 'ZDACW 36539' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:46:38.780 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:38.780 -07 000000455 INF: FPGA: Recv ZDACR 36539
17-03-18 01:46:38.790 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.790 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:38.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.940 -07 000000461 INF: FPGA: Recv ZSGSRD 35326
17-03-18 01:46:38.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:38.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.950 -07 000000447 INF: FPGA: Recv ZSGSRD 35330
17-03-18 01:46:38.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.960 -07 000000461 INF: FPGA: Recv ZSGSRD 35325
17-03-18 01:46:38.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.970 -07 000000611 INF: FPGA: Recv ZSGSRD 35326
17-03-18 01:46:38.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.980 -07 000000437 INF: FPGA: Recv ZSGSRD 35337
17-03-18 01:46:38.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:38.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:38.990 -07 000000461 INF: FPGA: Recv ZSGSRD 35329
17-03-18 01:46:39.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:39.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:39.000 -07 000000579 INF: FPGA: Recv ZSGSRD 35327
17-03-18 01:46:39.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:39.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:39.010 -07 000000462 INF: FPGA: Recv ZSGSRD 35327
17-03-18 01:46:39.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:39.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:39.020 -07 000000608 INF: FPGA: Recv ZSGSRD 35324
17-03-18 01:46:39.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:39.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:39.030 -07 000000579 INF: FPGA: Recv ZSGSRD 35330
17-03-18 01:46:39.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:39.040 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:39.040 -07 000000608 INF: FPGA: Recv ZPIEZORD 31046
17-03-18 01:46:39.050 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:39.050 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.575 V. Piezo Error = -9.4 V.
17-03-18 01:46:39.050 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.3 um, Read 10 ADC samples: Avg = 35328 (-166.4 uncal um), Error = 0.9 uncal um, Median = 35327 (-166.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35324 (-166.4 uncal um), Max = 35337 (-166.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:39.050 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35328, posNoise = 9, negNoise = 4
17-03-18 01:46:39.050 -07 000000610 INF: Z Motor: After move to -0.167265, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:39.050 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:46:39.050 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:39.050 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:39.050 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:39.050 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:39.050 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:39.050 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:39.050 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:39.050 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:39.050 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:39.050 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:39.050 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:39.050 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:39.060 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:46:39.060 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:39.060 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:46:39.060 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:39.070 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:46:39.070 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 01:46:39.070 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:46:39.070 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:46:39.080 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36715 150\n [Camera]
17-03-18 01:46:39.140 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.019446,
17-03-18 01:46:39.280 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:39.670 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:39.670 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:39.670 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:39.670 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:39.670 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:39.670 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:39.670 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:39.670 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 01:46:39.680 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:39.680 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 01:46:39.860 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36715 776
17-03-18 01:46:40.010 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:40.050 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 01:46:40.050 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 01:46:40.050 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:40.050 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 371 ms.
17-03-18 01:46:40.050 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 01:46:40.050 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:40.050 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:40.050 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:40.050 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 01:46:40.060 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 01:46:40.200 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:40.200 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:40.200 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:40.200 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:40.200 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 01:46:40.200 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:40.200 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:40.210 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:40.210 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:40.210 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 01:46:40.390 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:40.390 -07 000000608 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:40.390 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36715 150' command took 2 ms to send, 1306 ms to get response, and 1313 ms overall
17-03-18 01:46:40.390 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167859
17-03-18 01:46:40.390 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16786 mm
17-03-18 01:46:40.390 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:40.400 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 01:46:40.400 -07 000000591 INF: Y Motor: Moving to 71.5326 mm, started at 70.6875 mm, delta = 0.8451 mm
17-03-18 01:46:40.400 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:40.400 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 36669, sync = True, waitForSettling = False)
17-03-18 01:46:40.400 -07 000000592 INF: Z Motor: Moving to -0.167860 mm, started at -0.167278 mm, distance = -0.58 um
17-03-18 01:46:40.400 -07 000000461 INF: FPGA: Recv YRDPOS 144769
17-03-18 01:46:40.410 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:40.410 -07 000000591 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:40.410 -07 000000592 INF: FPGA: Xmit ZDACW 36669\n [Z Motor]
17-03-18 01:46:40.410 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 01:46:40.410 -07 000000591 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:40.410 -07 000000591 INF: Y Motor: Moving 1351 steps-31
17-03-18 01:46:40.420 -07 000000592 INF: FPGA: 'ZDACW 36669' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 01:46:40.420 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:40.420 -07 000000480 INF: FPGA: Recv ZDACR 36669
17-03-18 01:46:40.430 -07 000000592 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:40.430 -07 000000592 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 01:46:40.430 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:40.580 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:46:40.580 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:46:40.580 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:40.590 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:46:40.590 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 01:46:40.590 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:40.590 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:40.590 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 01:46:40.590 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:40.600 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 01:46:40.800 -07 000000447 INF: FPGA: Recv YMVTILE
17-03-18 01:46:40.800 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 01:46:40.850 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:40.850 -07 000000437 INF: FPGA: Recv YRDPOS 146469
17-03-18 01:46:40.860 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:40.860 -07 000000591 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:40.860 -07 000000591 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 01:46:40.860 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.845 mm, average velocity = 2.145 mm/sec
17-03-18 01:46:41.810 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:41.810 -07 000000437 INF: FPGA: Recv YRDPOS 146470
17-03-18 01:46:41.820 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:41.820 -07 000000591 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:41.840 -07 000000591 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:41.840 -07 000000591 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:46:41.840 -07 000000591 INF: Y Motor: Moved to 71.5186 after 1445 ms (table move)
17-03-18 01:46:41.840 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167860 mm (DAC = 36669)
17-03-18 01:46:41.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.850 -07 000000462 INF: FPGA: Recv ZSGSRD 35429
17-03-18 01:46:41.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:41.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.860 -07 000000592 INF: FPGA: Recv ZSGSRD 35414
17-03-18 01:46:41.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:41.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.870 -07 000000455 INF: FPGA: Recv ZSGSRD 35419
17-03-18 01:46:41.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.880 -07 000000467 INF: FPGA: Recv ZSGSRD 35424
17-03-18 01:46:41.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.890 -07 000000455 INF: FPGA: Recv ZSGSRD 35419
17-03-18 01:46:41.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.900 -07 000000487 INF: FPGA: Recv ZSGSRD 35422
17-03-18 01:46:41.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.910 -07 000000467 INF: FPGA: Recv ZSGSRD 35414
17-03-18 01:46:41.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.920 -07 000000462 INF: FPGA: Recv ZSGSRD 35419
17-03-18 01:46:41.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.930 -07 000000455 INF: FPGA: Recv ZSGSRD 35415
17-03-18 01:46:41.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:41.940 -07 000000579 INF: FPGA: Recv ZSGSRD 35426
17-03-18 01:46:41.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.950 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:41.950 -07 000000455 INF: FPGA: Recv ZPIEZORD 31210
17-03-18 01:46:41.960 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:41.960 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.595 V. Piezo Error = -9.3 V.
17-03-18 01:46:41.960 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35420 (-167.0 uncal um), Error = 0.9 uncal um, Median = 35419 (-167.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35414 (-167.0 uncal um), Max = 35429 (-167.1 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:41.960 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35420, posNoise = 9, negNoise = 6
17-03-18 01:46:41.960 -07 000000610 INF: Z Motor: After move to -0.167860, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:41.960 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 111 ms (allowed 150 ms), total time = 1557 ms
17-03-18 01:46:41.960 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:42.000 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-18 01:46:42.000 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:42.000 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.167868946072308. ----------
17-03-18 01:46:42.000 -07 000000610 INF: Cycle	91	Tile	15	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:42.000 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36492, sync = True, waitForSettling = True)
17-03-18 01:46:42.000 -07 000000610 INF: Z Motor: Moving to -0.167050 mm, started at -0.167869 mm, distance = 0.82 um
17-03-18 01:46:42.000 -07 000000610 INF: FPGA: Xmit ZDACW 36492\n [Z Motor]
17-03-18 01:46:42.000 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 01:46:42.010 -07 000000610 INF: FPGA: 'ZDACW 36492' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:42.010 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:42.010 -07 000000437 INF: FPGA: Recv ZDACR 36492
17-03-18 01:46:42.020 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.020 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:42.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.170 -07 000000447 INF: FPGA: Recv ZSGSRD 35299
17-03-18 01:46:42.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:42.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.180 -07 000000480 INF: FPGA: Recv ZSGSRD 35296
17-03-18 01:46:42.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.190 -07 000000611 INF: FPGA: Recv ZSGSRD 35298
17-03-18 01:46:42.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.200 -07 000000592 INF: FPGA: Recv ZSGSRD 35301
17-03-18 01:46:42.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.210 -07 000000611 INF: FPGA: Recv ZSGSRD 35301
17-03-18 01:46:42.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.220 -07 000000579 INF: FPGA: Recv ZSGSRD 35292
17-03-18 01:46:42.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:42.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.230 -07 000000461 INF: FPGA: Recv ZSGSRD 35291
17-03-18 01:46:42.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.240 -07 000000579 INF: FPGA: Recv ZSGSRD 35294
17-03-18 01:46:42.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.250 -07 000000462 INF: FPGA: Recv ZSGSRD 35298
17-03-18 01:46:42.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:42.260 -07 000000461 INF: FPGA: Recv ZSGSRD 35298
17-03-18 01:46:42.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.270 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:42.270 -07 000000579 INF: FPGA: Recv ZPIEZORD 31042
17-03-18 01:46:42.280 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:42.280 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.568 V. Piezo Error = -9.4 V.
17-03-18 01:46:42.280 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35297 (-166.2 uncal um), Error = 0.8 uncal um, Median = 35298 (-166.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35291 (-166.2 uncal um), Max = 35301 (-166.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:42.280 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35297, posNoise = 4, negNoise = 6
17-03-18 01:46:42.280 -07 000000610 INF: Z Motor: After move to -0.167050, error = -0.000029, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:42.280 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:46:42.280 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:42.280 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:42.280 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:42.280 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:42.280 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:42.280 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:42.280 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:42.280 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:42.280 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:42.280 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:42.280 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:42.280 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:42.280 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:42.280 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:42.290 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:46:42.290 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:42.290 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:42.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:42.300 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 01:46:42.300 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 01:46:42.300 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 01:46:42.300 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:46:42.310 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36669 150\n [Camera]
17-03-18 01:46:42.500 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:42.900 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:42.900 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:42.900 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:42.900 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:42.900 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 01:46:42.900 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:42.900 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:42.900 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:42.900 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:42.900 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 01:46:43.090 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36669 776
17-03-18 01:46:43.240 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:43.280 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 01:46:43.280 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 01:46:43.280 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:43.280 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 01:46:43.280 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 01:46:43.280 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:43.280 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:43.280 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:46:43.280 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:43.290 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 01:46:43.430 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:43.430 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:43.430 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:43.430 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:43.430 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 01:46:43.430 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:43.430 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:43.430 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:43.430 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:43.430 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 01:46:43.620 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:43.620 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:43.620 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36669 150' command took 2 ms to send, 1303 ms to get response, and 1314 ms overall
17-03-18 01:46:43.630 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 01:46:43.630 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.5185546875, Z-Position -0.167078767978871. ------
17-03-18 01:46:43.630 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:43.640 -07 000000608 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.17341 mm
17-03-18 01:46:43.640 -07 000000608 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:43.640 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:43.640 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 01:46:43.640 -07 000000437 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm
17-03-18 01:46:43.640 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 37880, sync = True, waitForSettling = False)
17-03-18 01:46:43.640 -07 000000591 INF: Z Motor: Moving to -0.173404 mm, started at -0.167079 mm, distance = -6.32 um
17-03-18 01:46:43.650 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:43.650 -07 000000591 INF: FPGA: Xmit ZDACW 37880\n [Z Motor]
17-03-18 01:46:43.650 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 01:46:43.660 -07 000000591 INF: FPGA: 'ZDACW 37880' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 01:46:43.660 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:43.660 -07 000000579 INF: FPGA: Recv YRDPOS 146470
17-03-18 01:46:43.670 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:46:43.670 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 01:46:43.670 -07 000000437 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:43.670 -07 000000437 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:43.670 -07 000000437 INF: Y Motor: Moving 1350 steps-30
17-03-18 01:46:43.680 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:43.680 -07 000000462 INF: FPGA: Recv ZDACR 37880
17-03-18 01:46:43.690 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:46:43.690 -07 000000591 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 01:46:43.690 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:43.810 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:46:43.810 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:46:43.810 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:43.810 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 01:46:43.810 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 01:46:43.810 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:43.820 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:43.820 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 01:46:43.820 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:43.820 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 01:46:43.870 -07 000000487 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:46:43.870 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 01:46:44.060 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-18 01:46:44.060 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:46:44.110 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:44.110 -07 000000592 INF: FPGA: Recv YRDPOS 148171
17-03-18 01:46:44.120 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:44.120 -07 000000437 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:44.120 -07 000000437 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 01:46:44.120 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.126 mm/sec
17-03-18 01:46:44.500 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.011254,
17-03-18 01:46:45.070 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:45.070 -07 000000591 INF: FPGA: Recv YRDPOS 148171
17-03-18 01:46:45.080 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:45.080 -07 000000437 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:45.100 -07 000000437 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:45.100 -07 000000437 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:45.100 -07 000000437 INF: Y Motor: Moved to 72.3491 after 1464 ms (table move)
17-03-18 01:46:45.110 -07 000000608 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173404 mm (DAC = 37880)
17-03-18 01:46:45.110 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.110 -07 000000467 INF: FPGA: Recv ZSGSRD 36276
17-03-18 01:46:45.120 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:45.120 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.120 -07 000000591 INF: FPGA: Recv ZSGSRD 36286
17-03-18 01:46:45.130 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.130 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.130 -07 000000467 INF: FPGA: Recv ZSGSRD 36278
17-03-18 01:46:45.140 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.140 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.140 -07 000000591 INF: FPGA: Recv ZSGSRD 36278
17-03-18 01:46:45.150 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.150 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.150 -07 000000467 INF: FPGA: Recv ZSGSRD 36286
17-03-18 01:46:45.160 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.160 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.160 -07 000000592 INF: FPGA: Recv ZSGSRD 36283
17-03-18 01:46:45.170 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.170 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.170 -07 000000437 INF: FPGA: Recv ZSGSRD 36286
17-03-18 01:46:45.180 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.180 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.180 -07 000000579 INF: FPGA: Recv ZSGSRD 36284
17-03-18 01:46:45.190 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.190 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.190 -07 000000462 INF: FPGA: Recv ZSGSRD 36281
17-03-18 01:46:45.200 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.200 -07 000000608 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:45.200 -07 000000591 INF: FPGA: Recv ZSGSRD 36283
17-03-18 01:46:45.210 -07 000000608 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.210 -07 000000608 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:45.210 -07 000000487 INF: FPGA: Recv ZPIEZORD 32372
17-03-18 01:46:45.220 -07 000000608 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:45.220 -07 000000608 INF: Z Motor: Piezo is near 49.2 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.780 V. Piezo Error = -8.6 V.
17-03-18 01:46:45.220 -07 000000608 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.4 um, Read 10 ADC samples: Avg = 36282 (-172.5 uncal um), Error = 0.9 uncal um, Median = 36283 (-172.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36276 (-172.5 uncal um), Max = 36286 (-172.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:45.220 -07 000000608 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36282, posNoise = 4, negNoise = 6
17-03-18 01:46:45.220 -07 000000608 INF: Z Motor: After move to -0.173404, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:45.220 -07 000000608 INF: Z Motor: Settle wait time = 1467 ms, measure time = 108 ms (allowed 150 ms), total time = 1575 ms
17-03-18 01:46:45.220 -07 000000608 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:45.270 -07 000000608 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms
17-03-18 01:46:45.270 -07 000000608 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:45.270 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:45.270 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:45.270 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:45.270 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:46:45.270 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:45.270 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:45.270 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:46:45.270 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:46:45.280 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:46:45.280 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:46:45.290 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 01:46:45.290 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 01:46:45.290 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:46:45.340 -07 000000462 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:46:45.630 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:46:45.630 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:46:45.640 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:46:45.640 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-18 01:46:45.670 -07 000000467 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:46:45.670 -07 000000462 INF: FPGA: Recv CAMSNAP
17-03-18 01:46:45.670 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 384 ms overall
17-03-18 01:46:45.750 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 114 ms.
17-03-18 01:46:45.750 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:45.750 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 01:46:45.750 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms.
17-03-18 01:46:45.770 -07 000000437 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:45.770 -07 000000591 INF: Autofocus start
17-03-18 01:46:45.770 -07 000000591 INF: MeasureProfile start
17-03-18 01:46:45.770 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:45.780 -07 000000437 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:45.780 -07 000000437 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:46:45.790 -07 000000591 INF: MeasureProfile done
17-03-18 01:46:45.790 -07 000000591 INF: X=0  Z correction [um]=-0.0713522
17-03-18 01:46:45.790 -07 000000591 INF: Autofocus finished
17-03-18 01:46:45.980 -07 000000447 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:46:45.980 -07 000000437 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:46:45.980 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.173406616938506. ----------
17-03-18 01:46:45.990 -07 000000610 INF: Cycle	91	Tile	16	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:45.990 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36377, sync = True, waitForSettling = True)
17-03-18 01:46:45.990 -07 000000610 INF: Z Motor: Moving to -0.166523 mm, started at -0.173407 mm, distance = 6.88 um
17-03-18 01:46:45.990 -07 000000610 INF: FPGA: Xmit ZDACW 36377\n [Z Motor]
17-03-18 01:46:45.990 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 01:46:46.000 -07 000000610 INF: FPGA: 'ZDACW 36377' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:46.000 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:46.000 -07 000000611 INF: FPGA: Recv ZDACR 36377
17-03-18 01:46:46.010 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.010 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:46.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.160 -07 000000461 INF: FPGA: Recv ZSGSRD 35210
17-03-18 01:46:46.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:46.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.170 -07 000000437 INF: FPGA: Recv ZSGSRD 35210
17-03-18 01:46:46.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.180 -07 000000461 INF: FPGA: Recv ZSGSRD 35214
17-03-18 01:46:46.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.190 -07 000000611 INF: FPGA: Recv ZSGSRD 35212
17-03-18 01:46:46.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.200 -07 000000480 INF: FPGA: Recv ZSGSRD 35206
17-03-18 01:46:46.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.210 -07 000000461 INF: FPGA: Recv ZSGSRD 35219
17-03-18 01:46:46.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.220 -07 000000611 INF: FPGA: Recv ZSGSRD 35206
17-03-18 01:46:46.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.230 -07 000000480 INF: FPGA: Recv ZSGSRD 35206
17-03-18 01:46:46.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.240 -07 000000461 INF: FPGA: Recv ZSGSRD 35213
17-03-18 01:46:46.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:46.250 -07 000000611 INF: FPGA: Recv ZSGSRD 35208
17-03-18 01:46:46.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.260 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:46.260 -07 000000502 INF: FPGA: Recv ZPIEZORD 30968
17-03-18 01:46:46.270 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:46.270 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.551 V. Piezo Error = -9.4 V.
17-03-18 01:46:46.270 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.5 um, Read 10 ADC samples: Avg = 35210 (-165.7 uncal um), Error = 0.9 uncal um, Median = 35210 (-165.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35206 (-165.6 uncal um), Max = 35219 (-165.7 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:46:46.270 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35210, posNoise = 9, negNoise = 4
17-03-18 01:46:46.270 -07 000000610 INF: Z Motor: After move to -0.166523, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:46.270 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 01:46:46.270 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:46.270 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:46.270 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:46.270 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:46.270 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:46.270 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:46.270 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:46.270 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:46:46.270 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:46.270 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:46.270 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 01:46:46.270 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:46.280 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:46.280 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:46:46.280 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:46.280 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:46.290 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 01:46:46.290 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 01:46:46.290 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 01:46:46.290 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 01:46:46.290 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36554 150\n [Camera]
17-03-18 01:46:46.490 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:46.880 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:46.880 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:46.880 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:46.880 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:46.880 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 01:46:46.880 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:46.880 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:46.880 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:46.880 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:46.880 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 01:46:47.070 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36554 776
17-03-18 01:46:47.220 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:47.280 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 01:46:47.280 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 01:46:47.280 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:47.280 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 01:46:47.280 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 01:46:47.280 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:47.290 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:47.290 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 01:46:47.290 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:47.290 -07 000000611 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:47.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:47.290 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 01:46:47.410 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:47.410 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:47.410 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:47.410 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:47.410 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 01:46:47.410 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:47.410 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:47.410 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:47.410 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:47.410 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 01:46:47.600 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1309
17-03-18 01:46:47.610 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:47.610 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36554 150' command took 2 ms to send, 1310 ms to get response, and 1317 ms overall
17-03-18 01:46:47.610 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.166981
17-03-18 01:46:47.610 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16698 mm
17-03-18 01:46:47.610 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:47.740 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 01:46:47.740 -07 000000487 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 01:46:47.740 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:47.740 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 36477, sync = True, waitForSettling = False)
17-03-18 01:46:47.740 -07 000000480 INF: Z Motor: Moving to -0.166981 mm, started at -0.166520 mm, distance = -0.46 um
17-03-18 01:46:47.740 -07 000000447 INF: FPGA: Recv YRDPOS 148171
17-03-18 01:46:47.750 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:46:47.750 -07 000000487 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:47.750 -07 000000487 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:47.750 -07 000000487 INF: Y Motor: Moving 1350 steps-28
17-03-18 01:46:47.750 -07 000000480 INF: FPGA: Xmit ZDACW 36477\n [Z Motor]
17-03-18 01:46:47.750 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 01:46:47.760 -07 000000480 INF: FPGA: 'ZDACW 36477' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 01:46:47.760 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:47.760 -07 000000611 INF: FPGA: Recv ZDACR 36477
17-03-18 01:46:47.770 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:47.770 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:47.770 -07 000000480 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 01:46:47.820 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 406 ms.
17-03-18 01:46:47.820 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 01:46:47.820 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:47.820 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 405 ms.
17-03-18 01:46:47.820 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 405 ms.
17-03-18 01:46:47.820 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:47.820 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:47.830 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 01:46:47.830 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 415 ms.
17-03-18 01:46:47.830 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms.
17-03-18 01:46:48.140 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 01:46:48.140 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:46:48.190 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:48.190 -07 000000592 INF: FPGA: Recv YRDPOS 149863
17-03-18 01:46:48.200 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:48.200 -07 000000487 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:48.200 -07 000000487 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 01:46:48.200 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.125 mm/sec
17-03-18 01:46:49.160 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:49.160 -07 000000502 INF: FPGA: Recv YRDPOS 149863
17-03-18 01:46:49.170 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:49.170 -07 000000487 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:49.200 -07 000000487 INF: Y Motor: After move to 73.192604, error = -0.017311, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:49.200 -07 000000487 INF: Y Motor: Position error after settling (table move) = -35 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:49.200 -07 000000487 INF: Y Motor: Moved to 73.1753 after 1459 ms (table move)
17-03-18 01:46:49.200 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166981 mm (DAC = 36477)
17-03-18 01:46:49.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.210 -07 000000467 INF: FPGA: Recv ZSGSRD 35287
17-03-18 01:46:49.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 3 ms to get response, and 5 ms overall
17-03-18 01:46:49.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.210 -07 000000502 INF: FPGA: Recv ZSGSRD 35290
17-03-18 01:46:49.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:46:49.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.220 -07 000000467 INF: FPGA: Recv ZSGSRD 35297
17-03-18 01:46:49.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.230 -07 000000591 INF: FPGA: Recv ZSGSRD 35276
17-03-18 01:46:49.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.240 -07 000000455 INF: FPGA: Recv ZSGSRD 35279
17-03-18 01:46:49.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.250 -07 000000591 INF: FPGA: Recv ZSGSRD 35284
17-03-18 01:46:49.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.260 -07 000000467 INF: FPGA: Recv ZSGSRD 35277
17-03-18 01:46:49.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.270 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.270 -07 000000591 INF: FPGA: Recv ZSGSRD 35280
17-03-18 01:46:49.280 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.280 -07 000000455 INF: FPGA: Recv ZSGSRD 35285
17-03-18 01:46:49.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.290 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.290 -07 000000591 INF: FPGA: Recv ZSGSRD 35286
17-03-18 01:46:49.300 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.300 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:49.300 -07 000000611 INF: FPGA: Recv ZPIEZORD 31071
17-03-18 01:46:49.310 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.310 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.566 V. Piezo Error = -9.3 V.
17-03-18 01:46:49.310 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35284 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35284 (-166.1 uncal um), StdDev = 6 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 35276 (-166.1 uncal um), Max = 35297 (-166.2 uncal um), Pos Noise = 13 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:46:49.310 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35284, posNoise = 13, negNoise = 8
17-03-18 01:46:49.310 -07 000000610 INF: Z Motor: After move to -0.166981, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:49.310 -07 000000610 INF: Z Motor: Settle wait time = 1461 ms, measure time = 103 ms (allowed 150 ms), total time = 1564 ms
17-03-18 01:46:49.310 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:49.360 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1747 ms
17-03-18 01:46:49.360 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:49.360 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17529296875, Z-position -0.166995253221029. ----------
17-03-18 01:46:49.360 -07 000000610 INF: Cycle	91	Tile	17	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:49.360 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36300, sync = True, waitForSettling = True)
17-03-18 01:46:49.360 -07 000000610 INF: Z Motor: Moving to -0.166171 mm, started at -0.166995 mm, distance = 0.82 um
17-03-18 01:46:49.360 -07 000000610 INF: FPGA: Xmit ZDACW 36300\n [Z Motor]
17-03-18 01:46:49.370 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 01:46:49.370 -07 000000610 INF: FPGA: 'ZDACW 36300' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 01:46:49.370 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:49.370 -07 000000579 INF: FPGA: Recv ZDACR 36300
17-03-18 01:46:49.380 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:49.380 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:49.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.530 -07 000000592 INF: FPGA: Recv ZSGSRD 35150
17-03-18 01:46:49.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.550 -07 000000467 INF: FPGA: Recv ZSGSRD 35162
17-03-18 01:46:49.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:49.560 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.560 -07 000000579 INF: FPGA: Recv ZSGSRD 35155
17-03-18 01:46:49.570 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.570 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.570 -07 000000592 INF: FPGA: Recv ZSGSRD 35160
17-03-18 01:46:49.580 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.580 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.580 -07 000000437 INF: FPGA: Recv ZSGSRD 35156
17-03-18 01:46:49.590 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.590 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.590 -07 000000462 INF: FPGA: Recv ZSGSRD 35163
17-03-18 01:46:49.600 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.600 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.600 -07 000000447 INF: FPGA: Recv ZSGSRD 35161
17-03-18 01:46:49.610 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.610 -07 000000455 INF: FPGA: Recv ZSGSRD 35156
17-03-18 01:46:49.620 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.620 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.620 -07 000000447 INF: FPGA: Recv ZSGSRD 35159
17-03-18 01:46:49.630 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:49.630 -07 000000487 INF: FPGA: Recv ZSGSRD 35148
17-03-18 01:46:49.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.640 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:49.640 -07 000000462 INF: FPGA: Recv ZPIEZORD 30896
17-03-18 01:46:49.650 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:49.650 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.539 V. Piezo Error = -9.4 V.
17-03-18 01:46:49.650 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.2 um, Read 10 ADC samples: Avg = 35157 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35158 (-165.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35148 (-165.3 uncal um), Max = 35163 (-165.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 01:46:49.650 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35157, posNoise = 6, negNoise = 9
17-03-18 01:46:49.650 -07 000000610 INF: Z Motor: After move to -0.166171, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:49.650 -07 000000610 INF: Z Motor: MoveAbsStepped took 282 ms)
17-03-18 01:46:49.650 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:49.650 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:49.650 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:49.650 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:49.650 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:49.650 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:49.650 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:49.650 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:49.650 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 01:46:49.650 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:49.650 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:49.650 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:49.660 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:49.660 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:49.660 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:46:49.660 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:49.670 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 01:46:49.670 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 01:46:49.670 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 01:46:49.670 -07 000000611 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 01:46:49.670 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36477 150\n [Camera]
17-03-18 01:46:49.860 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.016692,
17-03-18 01:46:49.870 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:50.260 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:50.260 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:50.260 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:50.260 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:50.270 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:50.270 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:50.270 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:50.270 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) start.
17-03-18 01:46:50.270 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:50.270 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:46:50.450 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36477 776
17-03-18 01:46:50.610 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 928
17-03-18 01:46:50.660 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 01:46:50.660 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 01:46:50.660 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:50.670 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:50.670 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 01:46:50.670 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 2486767776, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 01:46:50.670 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:46:50.670 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:50.670 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:50.680 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 01:46:50.790 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:50.790 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:50.790 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:50.790 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:50.790 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:46:50.800 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:50.800 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:50.800 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:50.800 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:50.800 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:46:50.980 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:50.980 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:50.980 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36477 150' command took 2 ms to send, 1309 ms to get response, and 1313 ms overall
17-03-18 01:46:50.990 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166626
17-03-18 01:46:50.990 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16663 mm
17-03-18 01:46:50.990 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:50.990 -07 000000437 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 01:46:50.990 -07 000000437 INF: Y Motor: Moving to 74.0226 mm, started at 73.1753 mm, delta = 0.8473 mm
17-03-18 01:46:50.990 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:50.990 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 36400, sync = True, waitForSettling = False)
17-03-18 01:46:50.990 -07 000000502 INF: Z Motor: Moving to -0.166629 mm, started at -0.166179 mm, distance = -0.45 um
17-03-18 01:46:50.990 -07 000000455 INF: FPGA: Recv YRDPOS 149863
17-03-18 01:46:51.000 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:46:51.000 -07 000000437 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:51.000 -07 000000437 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:51.000 -07 000000437 INF: Y Motor: Moving 1356 steps-35
17-03-18 01:46:51.000 -07 000000502 INF: FPGA: Xmit ZDACW 36400\n [Z Motor]
17-03-18 01:46:51.000 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:46:51.010 -07 000000502 INF: FPGA: 'ZDACW 36400' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 01:46:51.010 -07 000000437 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:51.020 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:51.020 -07 000000480 INF: FPGA: Recv ZDACR 36400
17-03-18 01:46:51.030 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:51.030 -07 000000502 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 01:46:51.200 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 01:46:51.200 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 01:46:51.200 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:51.200 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 400 ms.
17-03-18 01:46:51.200 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 01:46:51.200 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:51.200 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:51.200 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 01:46:51.200 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:51.210 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 01:46:51.380 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 01:46:51.380 -07 000000437 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 01:46:51.420 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:51.420 -07 000000447 INF: FPGA: Recv YRDPOS 151567
17-03-18 01:46:51.430 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:51.430 -07 000000437 INF: Y Motor: Encoder = 151567 = motor step 118411.7 = 74.0073 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:51.430 -07 000000437 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 01:46:51.430 -07 000000437 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.847 mm, average velocity = 2.189 mm/sec
17-03-18 01:46:52.290 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:52.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:52.380 -07 000000437 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:52.380 -07 000000591 INF: FPGA: Recv YRDPOS 151568
17-03-18 01:46:52.390 -07 000000437 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:52.390 -07 000000437 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:52.400 -07 000000437 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:52.410 -07 000000437 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:46:52.410 -07 000000437 INF: Y Motor: Moved to 74.0078 after 1416 ms (table move)
17-03-18 01:46:52.410 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166629 mm (DAC = 36400)
17-03-18 01:46:52.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.410 -07 000000447 INF: FPGA: Recv ZSGSRD 35236
17-03-18 01:46:52.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:46:52.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.420 -07 000000467 INF: FPGA: Recv ZSGSRD 35230
17-03-18 01:46:52.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.430 -07 000000487 INF: FPGA: Recv ZSGSRD 35234
17-03-18 01:46:52.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.440 -07 000000591 INF: FPGA: Recv ZSGSRD 35231
17-03-18 01:46:52.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.450 -07 000000437 INF: FPGA: Recv ZSGSRD 35230
17-03-18 01:46:52.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.460 -07 000000591 INF: FPGA: Recv ZSGSRD 35230
17-03-18 01:46:52.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.470 -07 000000502 INF: FPGA: Recv ZSGSRD 35223
17-03-18 01:46:52.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.480 -07 000000591 INF: FPGA: Recv ZSGSRD 35230
17-03-18 01:46:52.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.490 -07 000000437 INF: FPGA: Recv ZSGSRD 35226
17-03-18 01:46:52.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.500 -07 000000591 INF: FPGA: Recv ZSGSRD 35223
17-03-18 01:46:52.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.510 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:52.510 -07 000000502 INF: FPGA: Recv ZPIEZORD 30980
17-03-18 01:46:52.520 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.520 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.554 V. Piezo Error = -9.4 V.
17-03-18 01:46:52.520 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35229 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35230 (-165.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35223 (-165.7 uncal um), Max = 35236 (-165.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:52.520 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35229, posNoise = 7, negNoise = 6
17-03-18 01:46:52.520 -07 000000610 INF: Z Motor: After move to -0.166629, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:52.520 -07 000000610 INF: Z Motor: Settle wait time = 1418 ms, measure time = 108 ms (allowed 150 ms), total time = 1526 ms
17-03-18 01:46:52.520 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:52.570 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1578 ms
17-03-18 01:46:52.570 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:52.570 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.166641921553232. ----------
17-03-18 01:46:52.570 -07 000000610 INF: Cycle	91	Tile	18	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:52.570 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36223, sync = True, waitForSettling = True)
17-03-18 01:46:52.570 -07 000000610 INF: Z Motor: Moving to -0.165818 mm, started at -0.166642 mm, distance = 0.82 um
17-03-18 01:46:52.570 -07 000000610 INF: FPGA: Xmit ZDACW 36223\n [Z Motor]
17-03-18 01:46:52.570 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:46:52.580 -07 000000610 INF: FPGA: 'ZDACW 36223' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:46:52.580 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:52.580 -07 000000462 INF: FPGA: Recv ZDACR 36223
17-03-18 01:46:52.590 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.590 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:52.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.740 -07 000000447 INF: FPGA: Recv ZSGSRD 35105
17-03-18 01:46:52.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:52.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.750 -07 000000591 INF: FPGA: Recv ZSGSRD 35108
17-03-18 01:46:52.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.760 -07 000000611 INF: FPGA: Recv ZSGSRD 35108
17-03-18 01:46:52.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.770 -07 000000447 INF: FPGA: Recv ZSGSRD 35104
17-03-18 01:46:52.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.780 -07 000000611 INF: FPGA: Recv ZSGSRD 35101
17-03-18 01:46:52.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.790 -07 000000447 INF: FPGA: Recv ZSGSRD 35102
17-03-18 01:46:52.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.800 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.800 -07 000000579 INF: FPGA: Recv ZSGSRD 35098
17-03-18 01:46:52.810 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.810 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.810 -07 000000447 INF: FPGA: Recv ZSGSRD 35102
17-03-18 01:46:52.820 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.820 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.820 -07 000000579 INF: FPGA: Recv ZSGSRD 35100
17-03-18 01:46:52.830 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.830 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:52.830 -07 000000447 INF: FPGA: Recv ZSGSRD 35106
17-03-18 01:46:52.840 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.840 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:52.840 -07 000000579 INF: FPGA: Recv ZPIEZORD 30833
17-03-18 01:46:52.850 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:52.850 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.527 V. Piezo Error = -9.4 V.
17-03-18 01:46:52.850 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35103 (-165.0 uncal um), Error = 0.9 uncal um, Median = 35103 (-165.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35098 (-164.9 uncal um), Max = 35108 (-165.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:46:52.850 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35103, posNoise = 5, negNoise = 5
17-03-18 01:46:52.850 -07 000000610 INF: Z Motor: After move to -0.165818, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:52.850 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:46:52.850 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:52.850 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:52.850 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:52.850 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:52.850 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:52.850 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:52.850 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:52.850 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:52.850 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:46:52.850 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:52.850 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:46:52.850 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:52.860 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:52.860 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:52.860 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:46:52.860 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:52.870 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:46:52.870 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:46:52.870 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:46:52.870 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:46:52.880 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36400 150\n [Camera]
17-03-18 01:46:53.070 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:53.470 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:53.470 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:53.470 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:53.470 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:53.470 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 01:46:53.470 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:53.470 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:53.470 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:53.590 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:53.590 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:46:53.660 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36400 776
17-03-18 01:46:53.810 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:53.860 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 01:46:53.860 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 01:46:53.860 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:53.860 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:53.860 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:46:53.960 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 01:46:53.960 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 01:46:53.960 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:53.960 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:46:53.970 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 500 ms.
17-03-18 01:46:54.000 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:54.000 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:54.000 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:54.000 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:54.000 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:54.000 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:54.010 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:54.010 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:46:54.010 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:54.010 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:46:54.190 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:46:54.190 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:54.190 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36400 150' command took 2 ms to send, 1303 ms to get response, and 1313 ms overall
17-03-18 01:46:54.190 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165778
17-03-18 01:46:54.190 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16578 mm
17-03-18 01:46:54.190 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:54.190 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 01:46:54.190 -07 000000480 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 01:46:54.190 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:54.190 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 36214, sync = True, waitForSettling = False)
17-03-18 01:46:54.190 -07 000000467 INF: Z Motor: Moving to -0.165777 mm, started at -0.165832 mm, distance = 0.06 um
17-03-18 01:46:54.200 -07 000000467 INF: FPGA: Xmit ZDACW 36214\n [Z Motor]
17-03-18 01:46:54.200 -07 000000502 INF: FPGA: Recv YRDPOS 151568
17-03-18 01:46:54.200 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 01:46:54.200 -07 000000480 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:54.200 -07 000000480 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:46:54.200 -07 000000480 INF: Y Motor: Moving 1352 steps-31
17-03-18 01:46:54.200 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:46:54.210 -07 000000467 INF: FPGA: 'ZDACW 36214' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 01:46:54.210 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:46:54.220 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:54.220 -07 000000502 INF: FPGA: Recv ZDACR 36214
17-03-18 01:46:54.230 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:46:54.230 -07 000000467 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 01:46:54.380 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 01:46:54.380 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 01:46:54.380 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:54.380 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 01:46:54.380 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 01:46:54.380 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:54.390 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:54.390 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 01:46:54.390 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:54.400 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 01:46:54.580 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 01:46:54.580 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 01:46:54.610 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:54.620 -07 000000455 INF: FPGA: Recv YRDPOS 153254
17-03-18 01:46:54.620 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:46:54.620 -07 000000480 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:54.620 -07 000000480 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 01:46:54.620 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.200 mm/sec
17-03-18 01:46:55.220 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.027603,
17-03-18 01:46:55.570 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:55.570 -07 000000437 INF: FPGA: Recv YRDPOS 153254
17-03-18 01:46:55.580 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.580 -07 000000480 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:55.590 -07 000000480 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:46:55.590 -07 000000480 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:46:55.590 -07 000000480 INF: Y Motor: Moved to 74.8311 after 1399 ms (table move)
17-03-18 01:46:55.600 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165777 mm (DAC = 36214)
17-03-18 01:46:55.600 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.600 -07 000000592 INF: FPGA: Recv ZSGSRD 35102
17-03-18 01:46:55.610 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:55.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.610 -07 000000462 INF: FPGA: Recv ZSGSRD 35089
17-03-18 01:46:55.620 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.620 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.620 -07 000000579 INF: FPGA: Recv ZSGSRD 35091
17-03-18 01:46:55.630 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.630 -07 000000455 INF: FPGA: Recv ZSGSRD 35093
17-03-18 01:46:55.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.640 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.640 -07 000000591 INF: FPGA: Recv ZSGSRD 35092
17-03-18 01:46:55.650 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.650 -07 000000579 INF: FPGA: Recv ZSGSRD 35103
17-03-18 01:46:55.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.660 -07 000000447 INF: FPGA: Recv ZSGSRD 35099
17-03-18 01:46:55.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.670 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.670 -07 000000579 INF: FPGA: Recv ZSGSRD 35097
17-03-18 01:46:55.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.680 -07 000000611 INF: FPGA: Recv ZSGSRD 35092
17-03-18 01:46:55.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.690 -07 000000447 INF: FPGA: Recv ZSGSRD 35088
17-03-18 01:46:55.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.700 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:55.700 -07 000000579 INF: FPGA: Recv ZPIEZORD 30812
17-03-18 01:46:55.710 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.710 -07 000000610 INF: Z Motor: Piezo is near 45.8 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.526 V. Piezo Error = -9.4 V.
17-03-18 01:46:55.710 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35095 (-164.9 uncal um), Error = 0.9 uncal um, Median = 35092 (-164.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35088 (-164.9 uncal um), Max = 35103 (-165.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:46:55.710 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35095, posNoise = 8, negNoise = 7
17-03-18 01:46:55.710 -07 000000610 INF: Z Motor: After move to -0.165777, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:55.710 -07 000000610 INF: Z Motor: Settle wait time = 1402 ms, measure time = 109 ms (allowed 150 ms), total time = 1511 ms
17-03-18 01:46:55.710 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:46:55.760 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1563 ms
17-03-18 01:46:55.760 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:46:55.760 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.165781077126236. ----------
17-03-18 01:46:55.760 -07 000000610 INF: Cycle	91	Tile	19	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:46:55.760 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36038, sync = True, waitForSettling = True)
17-03-18 01:46:55.760 -07 000000610 INF: Z Motor: Moving to -0.164971 mm, started at -0.165781 mm, distance = 0.81 um
17-03-18 01:46:55.760 -07 000000610 INF: FPGA: Xmit ZDACW 36038\n [Z Motor]
17-03-18 01:46:55.760 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 01:46:55.770 -07 000000610 INF: FPGA: 'ZDACW 36038' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:46:55.770 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:55.770 -07 000000447 INF: FPGA: Recv ZDACR 36038
17-03-18 01:46:55.780 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:46:55.780 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:46:55.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.930 -07 000000611 INF: FPGA: Recv ZSGSRD 34969
17-03-18 01:46:55.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:55.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.940 -07 000000437 INF: FPGA: Recv ZSGSRD 34967
17-03-18 01:46:55.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.950 -07 000000502 INF: FPGA: Recv ZSGSRD 34965
17-03-18 01:46:55.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.960 -07 000000437 INF: FPGA: Recv ZSGSRD 34974
17-03-18 01:46:55.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.970 -07 000000502 INF: FPGA: Recv ZSGSRD 34975
17-03-18 01:46:55.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.980 -07 000000437 INF: FPGA: Recv ZSGSRD 34972
17-03-18 01:46:55.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:55.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:55.990 -07 000000502 INF: FPGA: Recv ZSGSRD 34975
17-03-18 01:46:56.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:56.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:56.000 -07 000000611 INF: FPGA: Recv ZSGSRD 34970
17-03-18 01:46:56.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:56.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:56.010 -07 000000502 INF: FPGA: Recv ZSGSRD 34972
17-03-18 01:46:56.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:56.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:46:56.020 -07 000000480 INF: FPGA: Recv ZSGSRD 34968
17-03-18 01:46:56.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:56.030 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:46:56.030 -07 000000447 INF: FPGA: Recv ZPIEZORD 30648
17-03-18 01:46:56.040 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:56.040 -07 000000610 INF: Z Motor: Piezo is near 45.5 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.499 V. Piezo Error = -9.5 V.
17-03-18 01:46:56.040 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.0 um, Read 10 ADC samples: Avg = 34971 (-164.1 uncal um), Error = 0.8 uncal um, Median = 34971 (-164.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 34965 (-164.1 uncal um), Max = 34975 (-164.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:46:56.040 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34971, posNoise = 4, negNoise = 6
17-03-18 01:46:56.040 -07 000000610 INF: Z Motor: After move to -0.164971, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:46:56.040 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 01:46:56.040 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:46:56.040 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:46:56.050 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:46:56.050 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:46:56.050 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:46:56.050 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:46:56.050 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:46:56.050 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:46:56.050 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:46:56.050 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:46:56.050 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 01:46:56.050 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:46:56.050 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:46:56.050 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:46:56.050 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:46:56.050 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:46:56.070 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:46:56.070 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 01:46:56.070 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:46:56.070 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 01:46:56.070 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 36214 150\n [Camera]
17-03-18 01:46:56.270 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:46:56.660 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:46:56.660 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:46:56.660 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:56.660 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:56.660 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 01:46:56.660 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:46:56.660 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:46:56.670 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:56.670 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:56.670 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 01:46:56.850 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36214 776
17-03-18 01:46:57.010 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:46:57.050 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 01:46:57.050 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 01:46:57.050 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:57.050 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 01:46:57.050 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:46:57.050 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:57.060 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:57.060 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:46:57.060 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 01:46:57.060 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 01:46:57.190 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:46:57.190 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:46:57.190 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:46:57.190 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:46:57.310 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 01:46:57.310 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:46:57.310 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:46:57.310 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:46:57.310 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:46:57.320 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:46:57.320 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:46:57.320 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:46:57.380 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:46:57.380 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:46:57.380 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 36214 150' command took 2 ms to send, 1309 ms to get response, and 1313 ms overall
17-03-18 01:46:57.690 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 01:46:57.690 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 499 ms.
17-03-18 01:46:57.690 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 01:46:57.690 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 01:46:57.690 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:57.690 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:46:57.700 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:57.700 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:46:57.700 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms.
17-03-18 01:46:57.700 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 01:46:57.710 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 01:46:57.740 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-18 01:46:57.740 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 01:46:57.780 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 01:46:57.780 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 01:46:57.790 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 01:46:57.790 -07 000000591 INF: FPGA: Recv EMCUR 
17-03-18 01:46:57.800 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:46:57.800 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 01:46:58.300 -07 000000462 INF: FPGA: Recv EMIN
17-03-18 01:46:58.300 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 493 ms to get response, and 502 ms overall
17-03-18 01:46:58.300 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 01:46:58.300 -07 000000461 INF: FPGA: Recv EMCUR 
17-03-18 01:46:58.310 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:46:58.310 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 01:46:58.310 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.8310546875, Z-Position -0.164984474820657. ------
17-03-18 01:46:58.310 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:46:58.310 -07 000000487 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13969 mm
17-03-18 01:46:58.310 -07 000000487 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:46:58.320 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 01:46:58.320 -07 000000611 INF: Y Motor: Moving to 59.9126 mm, started at 74.8311 mm, delta = -14.9184 mm
17-03-18 01:46:58.320 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:46:58.320 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:46:58.320 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:46:58.320 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 30516, sync = True, waitForSettling = False)
17-03-18 01:46:58.320 -07 000000455 INF: Z Motor: Moving to -0.139693 mm, started at -0.164984 mm, distance = 25.29 um
17-03-18 01:46:58.320 -07 000000462 INF: FPGA: Recv YRDPOS 153255
17-03-18 01:46:58.330 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:46:58.330 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:46:58.330 -07 000000611 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:46:58.330 -07 000000611 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 01:46:58.330 -07 000000611 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 01:46:58.340 -07 000000455 INF: FPGA: Xmit ZDACW 30516\n [Z Motor]
17-03-18 01:46:58.340 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 01:46:58.350 -07 000000455 INF: FPGA: 'ZDACW 30516' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 01:46:58.350 -07 000000611 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 01:46:58.360 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:46:58.360 -07 000000447 INF: FPGA: Recv ZDACR 30516
17-03-18 01:46:58.370 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 01:46:58.370 -07 000000455 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 01:46:58.530 -07 000000437 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:46:58.530 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 211 ms overall
17-03-18 01:46:59.980 -07 000000591 INF: FPGA: Recv YMVTO 122703 23903
17-03-18 01:46:59.980 -07 000000611 INF: FPGA: 'YMVTO 122701' command took 2 ms to send, 1621 ms to get response, and 1645 ms overall
17-03-18 01:46:59.980 -07 000000611 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 01:46:59.980 -07 000000611 INF: Y Motor: To move from 74.832 to 59.913 (-14.918 mm) should take 23870 steps, but required 23903 steps (14.939 mm). Slippage = 0.021 mm (0.00%).
17-03-18 01:46:59.980 -07 000000611 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1645 ms, distance = 14.918 mm, average velocity = 9.069 mm/sec
17-03-18 01:47:00.580 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.028963,
17-03-18 01:47:02.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:02.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:02.830 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:02.830 -07 000000592 INF: FPGA: Recv YRDPOS 122698
17-03-18 01:47:02.840 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:02.840 -07 000000611 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:02.870 -07 000000611 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:02.870 -07 000000611 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-18 01:47:02.870 -07 000000611 INF: Y Motor: Moved to 59.9111 after 4555 ms
17-03-18 01:47:02.870 -07 000000487 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139693 mm (DAC = 30516)
17-03-18 01:47:02.880 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.880 -07 000000455 INF: FPGA: Recv ZSGSRD 31036
17-03-18 01:47:02.890 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:02.890 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.890 -07 000000437 INF: FPGA: Recv ZSGSRD 31033
17-03-18 01:47:02.900 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.900 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.900 -07 000000447 INF: FPGA: Recv ZSGSRD 31041
17-03-18 01:47:02.910 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.910 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.910 -07 000000611 INF: FPGA: Recv ZSGSRD 31034
17-03-18 01:47:02.920 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.920 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.920 -07 000000447 INF: FPGA: Recv ZSGSRD 31034
17-03-18 01:47:02.930 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.930 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.930 -07 000000437 INF: FPGA: Recv ZSGSRD 31039
17-03-18 01:47:02.940 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.940 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.940 -07 000000455 INF: FPGA: Recv ZSGSRD 31035
17-03-18 01:47:02.950 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.950 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.950 -07 000000455 INF: FPGA: Recv ZSGSRD 31039
17-03-18 01:47:02.960 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.960 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.960 -07 000000437 INF: FPGA: Recv ZSGSRD 31032
17-03-18 01:47:02.970 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.970 -07 000000487 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:02.970 -07 000000455 INF: FPGA: Recv ZSGSRD 31033
17-03-18 01:47:02.980 -07 000000487 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.980 -07 000000487 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:02.980 -07 000000502 INF: FPGA: Recv ZPIEZORD 26514
17-03-18 01:47:02.990 -07 000000487 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:02.990 -07 000000487 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 46.6 V, since DAC is at 4.656 V. Piezo Error = -9.9 V.
17-03-18 01:47:02.990 -07 000000487 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.7 um, Read 10 ADC samples: Avg = 31036 (-138.9 uncal um), Error = 0.8 uncal um, Median = 31034 (-138.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 31032 (-138.9 uncal um), Max = 31041 (-138.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:47:02.990 -07 000000487 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31036, posNoise = 5, negNoise = 4
17-03-18 01:47:02.990 -07 000000487 INF: Z Motor: After move to -0.139693, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:02.990 -07 000000487 INF: Z Motor: Settle wait time = 4558 ms, measure time = 110 ms (allowed 150 ms), total time = 4668 ms
17-03-18 01:47:02.990 -07 000000487 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:03.030 -07 000000487 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4712 ms
17-03-18 01:47:03.030 -07 000000487 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:03.030 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:03.030 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:03.030 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:03.030 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:03.030 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:47:03.030 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:03.030 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:47:03.030 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 01:47:03.060 -07 000000502 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms.
17-03-18 01:47:03.060 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:47:03.060 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 01:47:03.060 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:47:03.070 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:47:03.070 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 43 ms.
17-03-18 01:47:03.080 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:47:03.120 -07 000000455 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:47:03.420 -07 000000502 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:47:03.420 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:47:03.420 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:47:03.420 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1389170736, 0x0, 559484976) start.
17-03-18 01:47:03.460 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:47:03.460 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 01:47:03.460 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall
17-03-18 01:47:03.540 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1389170736, 0x0, 559484976) end. Duration was 115 ms.
17-03-18 01:47:03.540 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:03.540 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 01:47:03.540 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 01:47:03.560 -07 000000467 INF: Image SNR check: start
17-03-18 01:47:03.560 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:03.560 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:03.570 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:03.570 -07 000000480 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:47:03.570 -07 000000467 INF: Image SNR check: pass  [peak (Max-Min)=141.54]
17-03-18 01:47:03.570 -07 000000467 INF: Autofocus start
17-03-18 01:47:03.570 -07 000000467 INF: MeasureProfile start
17-03-18 01:47:03.590 -07 000000467 INF: MeasureProfile done
17-03-18 01:47:03.590 -07 000000467 INF: X=48  Z correction [um]=0.2069503
17-03-18 01:47:03.590 -07 000000467 INF: Autofocus finished
17-03-18 01:47:03.770 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:47:03.770 -07 000000480 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:47:03.770 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.139705200042828. ----------
17-03-18 01:47:03.770 -07 000000610 INF: Cycle	91	Tile	1	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:03.780 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29073, sync = True, waitForSettling = True)
17-03-18 01:47:03.780 -07 000000610 INF: Z Motor: Moving to -0.133088 mm, started at -0.139705 mm, distance = 6.62 um
17-03-18 01:47:03.780 -07 000000610 INF: FPGA: Xmit ZDACW 29073\n [Z Motor]
17-03-18 01:47:03.780 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 01:47:03.790 -07 000000610 INF: FPGA: 'ZDACW 29073' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:03.790 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:03.790 -07 000000455 INF: FPGA: Recv ZDACR 29073
17-03-18 01:47:03.800 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:03.800 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:03.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:03.950 -07 000000487 INF: FPGA: Recv ZSGSRD 30005
17-03-18 01:47:03.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:03.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:03.960 -07 000000591 INF: FPGA: Recv ZSGSRD 30007
17-03-18 01:47:03.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:03.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:03.970 -07 000000487 INF: FPGA: Recv ZSGSRD 30003
17-03-18 01:47:03.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:03.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:03.980 -07 000000467 INF: FPGA: Recv ZSGSRD 30006
17-03-18 01:47:03.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:03.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:03.990 -07 000000591 INF: FPGA: Recv ZSGSRD 30004
17-03-18 01:47:04.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:04.000 -07 000000502 INF: FPGA: Recv ZSGSRD 30005
17-03-18 01:47:04.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:04.010 -07 000000467 INF: FPGA: Recv ZSGSRD 30007
17-03-18 01:47:04.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:04.020 -07 000000591 INF: FPGA: Recv ZSGSRD 30002
17-03-18 01:47:04.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:04.030 -07 000000592 INF: FPGA: Recv ZSGSRD 30002
17-03-18 01:47:04.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:04.040 -07 000000467 INF: FPGA: Recv ZSGSRD 30008
17-03-18 01:47:04.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.050 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:04.050 -07 000000592 INF: FPGA: Recv ZPIEZORD 25410
17-03-18 01:47:04.060 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:04.060 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.436 V. Piezo Error = -10.1 V.
17-03-18 01:47:04.060 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30005 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30005 (-132.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 30002 (-132.3 uncal um), Max = 30008 (-132.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 01:47:04.060 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30005, posNoise = 3, negNoise = 3
17-03-18 01:47:04.060 -07 000000610 INF: Z Motor: After move to -0.133088, error = 0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:04.060 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 01:47:04.060 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:04.060 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:04.060 -07 000000611 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:04.060 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:04.060 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:04.060 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:04.060 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:04.060 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:04.060 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:04.060 -07 000000462 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 01:47:04.060 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 01:47:04.060 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:04.070 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:04.070 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:04.070 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 01:47:04.070 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:04.080 -07 000000462 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 01:47:04.080 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:04.080 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:47:04.080 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:04.090 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 01:47:04.090 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-18 01:47:04.090 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 29250 150\n [Camera]
17-03-18 01:47:04.290 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:04.690 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:04.690 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:04.690 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:04.690 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:04.690 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:04.690 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:04.690 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:04.690 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 01:47:04.690 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:04.690 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1408252120, 0x0, 391868352) start.
17-03-18 01:47:04.880 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29250 776
17-03-18 01:47:05.030 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:05.090 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 01:47:05.090 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 01:47:05.090 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:05.090 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1408252120, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 01:47:05.090 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 01:47:05.090 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:05.090 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:05.090 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:05.090 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 01:47:05.100 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 01:47:05.220 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:05.220 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:05.220 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:05.220 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:05.220 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) start.
17-03-18 01:47:05.220 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:05.220 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:05.220 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:05.220 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:05.220 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) start.
17-03-18 01:47:05.410 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1309
17-03-18 01:47:05.410 -07 000000437 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:05.410 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 29250 150' command took 2 ms to send, 1305 ms to get response, and 1316 ms overall
17-03-18 01:47:05.410 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133352
17-03-18 01:47:05.410 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13335 mm
17-03-18 01:47:05.410 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:05.410 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 01:47:05.410 -07 000000462 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-18 01:47:05.420 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:05.420 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 29131, sync = True, waitForSettling = False)
17-03-18 01:47:05.420 -07 000000592 INF: Z Motor: Moving to -0.133353 mm, started at -0.133082 mm, distance = -0.27 um
17-03-18 01:47:05.420 -07 000000455 INF: FPGA: Recv YRDPOS 122698
17-03-18 01:47:05.430 -07 000000592 INF: FPGA: Xmit ZDACW 29131\n [Z Motor]
17-03-18 01:47:05.430 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:05.430 -07 000000462 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:05.430 -07 000000462 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:05.430 -07 000000462 INF: Y Motor: Moving 1330 steps2
17-03-18 01:47:05.430 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 01:47:05.440 -07 000000592 INF: FPGA: 'ZDACW 29131' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:47:05.440 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:05.440 -07 000000591 INF: FPGA: Recv ZDACR 29131
17-03-18 01:47:05.450 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:05.450 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:05.450 -07 000000592 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 01:47:05.620 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1113297000, 0x0, 391868352) end. Duration was 404 ms.
17-03-18 01:47:05.620 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 01:47:05.620 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:05.730 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1148719264, 0x0, 418435064) end. Duration was 510 ms.
17-03-18 01:47:05.730 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 510 ms.
17-03-18 01:47:05.730 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:05.730 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:05.740 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 115 ms.
17-03-18 01:47:05.740 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 520 ms.
17-03-18 01:47:05.740 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 521 ms.
17-03-18 01:47:05.820 -07 000000592 INF: FPGA: Recv YMVTILE
17-03-18 01:47:05.820 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:47:05.860 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:05.860 -07 000000480 INF: FPGA: Recv YRDPOS 124381
17-03-18 01:47:05.870 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:05.870 -07 000000462 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:05.870 -07 000000462 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 01:47:05.870 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.831 mm, average velocity = 2.089 mm/sec
17-03-18 01:47:06.040 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.012614,
17-03-18 01:47:06.820 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:06.820 -07 000000480 INF: FPGA: Recv YRDPOS 124381
17-03-18 01:47:06.830 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:06.830 -07 000000462 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:06.850 -07 000000462 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:06.850 -07 000000462 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:06.850 -07 000000462 INF: Y Motor: Moved to 60.7329 after 1438 ms (table move)
17-03-18 01:47:06.860 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133353 mm (DAC = 29131)
17-03-18 01:47:06.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.860 -07 000000591 INF: FPGA: Recv ZSGSRD 30047
17-03-18 01:47:06.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:06.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.870 -07 000000447 INF: FPGA: Recv ZSGSRD 30051
17-03-18 01:47:06.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.880 -07 000000591 INF: FPGA: Recv ZSGSRD 30051
17-03-18 01:47:06.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.890 -07 000000455 INF: FPGA: Recv ZSGSRD 30050
17-03-18 01:47:06.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.900 -07 000000611 INF: FPGA: Recv ZSGSRD 30053
17-03-18 01:47:06.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.910 -07 000000455 INF: FPGA: Recv ZSGSRD 30052
17-03-18 01:47:06.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.920 -07 000000591 INF: FPGA: Recv ZSGSRD 30049
17-03-18 01:47:06.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.930 -07 000000455 INF: FPGA: Recv ZSGSRD 30045
17-03-18 01:47:06.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.940 -07 000000462 INF: FPGA: Recv ZSGSRD 30054
17-03-18 01:47:06.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:06.950 -07 000000437 INF: FPGA: Recv ZSGSRD 30053
17-03-18 01:47:06.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.960 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:06.960 -07 000000591 INF: FPGA: Recv ZPIEZORD 25601
17-03-18 01:47:06.970 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:06.970 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.445 V. Piezo Error = -9.8 V.
17-03-18 01:47:06.970 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.4 um, Read 10 ADC samples: Avg = 30050 (-132.6 uncal um), Error = 0.8 uncal um, Median = 30051 (-132.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 30045 (-132.6 uncal um), Max = 30054 (-132.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:06.970 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30050, posNoise = 4, negNoise = 5
17-03-18 01:47:06.970 -07 000000610 INF: Z Motor: After move to -0.133353, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:06.970 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 109 ms (allowed 150 ms), total time = 1550 ms
17-03-18 01:47:06.970 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:07.020 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 01:47:07.020 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:07.020 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.133370926871052. ----------
17-03-18 01:47:07.020 -07 000000610 INF: Cycle	91	Tile	2	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:07.020 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28954, sync = True, waitForSettling = True)
17-03-18 01:47:07.020 -07 000000610 INF: Z Motor: Moving to -0.132543 mm, started at -0.133371 mm, distance = 0.83 um
17-03-18 01:47:07.020 -07 000000610 INF: FPGA: Xmit ZDACW 28954\n [Z Motor]
17-03-18 01:47:07.020 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 01:47:07.030 -07 000000610 INF: FPGA: 'ZDACW 28954' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:07.030 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:07.030 -07 000000455 INF: FPGA: Recv ZDACR 28954
17-03-18 01:47:07.040 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.040 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:07.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.190 -07 000000467 INF: FPGA: Recv ZSGSRD 29918
17-03-18 01:47:07.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:07.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.200 -07 000000591 INF: FPGA: Recv ZSGSRD 29925
17-03-18 01:47:07.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.210 -07 000000467 INF: FPGA: Recv ZSGSRD 29931
17-03-18 01:47:07.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.220 -07 000000437 INF: FPGA: Recv ZSGSRD 29922
17-03-18 01:47:07.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.230 -07 000000480 INF: FPGA: Recv ZSGSRD 29924
17-03-18 01:47:07.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.240 -07 000000467 INF: FPGA: Recv ZSGSRD 29921
17-03-18 01:47:07.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:07.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.250 -07 000000455 INF: FPGA: Recv ZSGSRD 29919
17-03-18 01:47:07.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.260 -07 000000437 INF: FPGA: Recv ZSGSRD 29922
17-03-18 01:47:07.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.270 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.270 -07 000000461 INF: FPGA: Recv ZSGSRD 29922
17-03-18 01:47:07.280 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:07.280 -07 000000487 INF: FPGA: Recv ZSGSRD 29925
17-03-18 01:47:07.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.290 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:07.290 -07 000000480 INF: FPGA: Recv ZPIEZORD 25413
17-03-18 01:47:07.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:07.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:07.300 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:07.300 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.418 V. Piezo Error = -9.9 V.
17-03-18 01:47:07.300 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29923 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29922 (-131.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29918 (-131.7 uncal um), Max = 29931 (-131.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:07.300 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29923, posNoise = 8, negNoise = 5
17-03-18 01:47:07.300 -07 000000610 INF: Z Motor: After move to -0.132543, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:07.300 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:47:07.300 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:07.300 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:07.300 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:07.300 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:07.300 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:07.300 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:07.300 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:07.300 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:07.300 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:07.300 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:07.300 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:07.300 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:07.310 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:07.310 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:07.310 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:07.310 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:07.320 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:47:07.320 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:07.320 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 01:47:07.320 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:07.330 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 29131 150\n [Camera]
17-03-18 01:47:07.520 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:07.920 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:07.920 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:07.920 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:07.920 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:07.920 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:07.920 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:07.920 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:07.920 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:47:07.920 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:07.920 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:47:08.110 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29131 779
17-03-18 01:47:08.260 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:08.320 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 01:47:08.320 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 01:47:08.320 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:08.320 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 394 ms.
17-03-18 01:47:08.320 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 01:47:08.320 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:08.320 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:08.320 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 01:47:08.320 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:08.330 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms.
17-03-18 01:47:08.450 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:08.450 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:08.450 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:08.450 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:08.450 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:08.450 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:08.460 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:08.460 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 01:47:08.460 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:08.460 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 01:47:08.640 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:08.640 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:08.640 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 29131 150' command took 2 ms to send, 1304 ms to get response, and 1313 ms overall
17-03-18 01:47:08.640 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.133227
17-03-18 01:47:08.640 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13323 mm
17-03-18 01:47:08.640 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:08.640 -07 000000592 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 01:47:08.640 -07 000000592 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 01:47:08.640 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:08.640 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 29103, sync = True, waitForSettling = False)
17-03-18 01:47:08.640 -07 000000502 INF: Z Motor: Moving to -0.133225 mm, started at -0.132555 mm, distance = -0.67 um
17-03-18 01:47:08.650 -07 000000502 INF: FPGA: Xmit ZDACW 29103\n [Z Motor]
17-03-18 01:47:08.650 -07 000000461 INF: FPGA: Recv YRDPOS 124382
17-03-18 01:47:08.650 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 01:47:08.650 -07 000000592 INF: Y Motor: Encoder = 124382 = motor step 97173.4 = 60.7334 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:08.650 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 01:47:08.650 -07 000000592 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:08.650 -07 000000592 INF: Y Motor: Moving 1343 steps-20
17-03-18 01:47:08.660 -07 000000502 INF: FPGA: 'ZDACW 29103' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:08.660 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:08.660 -07 000000591 INF: FPGA: Recv ZDACR 29103
17-03-18 01:47:08.670 -07 000000592 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:08.670 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:08.670 -07 000000502 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 01:47:08.840 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:47:08.840 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 01:47:08.840 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:08.840 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:08.840 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 01:47:08.840 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 01:47:08.840 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:08.850 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:08.850 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 01:47:08.850 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 01:47:09.040 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 01:47:09.040 -07 000000592 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 389 ms overall
17-03-18 01:47:09.090 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:09.090 -07 000000502 INF: FPGA: Recv YRDPOS 126083
17-03-18 01:47:09.100 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:09.100 -07 000000592 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:09.100 -07 000000592 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 01:47:09.100 -07 000000592 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.840 mm, average velocity = 2.159 mm/sec
17-03-18 01:47:10.050 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:10.050 -07 000000502 INF: FPGA: Recv YRDPOS 126083
17-03-18 01:47:10.060 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:10.060 -07 000000592 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:10.080 -07 000000592 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:10.080 -07 000000592 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:10.080 -07 000000592 INF: Y Motor: Moved to 61.5640 after 1439 ms (table move)
17-03-18 01:47:10.090 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133225 mm (DAC = 29103)
17-03-18 01:47:10.090 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.090 -07 000000462 INF: FPGA: Recv ZSGSRD 30026
17-03-18 01:47:10.100 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:10.100 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.100 -07 000000455 INF: FPGA: Recv ZSGSRD 30028
17-03-18 01:47:10.110 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.110 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.110 -07 000000480 INF: FPGA: Recv ZSGSRD 30019
17-03-18 01:47:10.120 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.120 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.120 -07 000000455 INF: FPGA: Recv ZSGSRD 30033
17-03-18 01:47:10.130 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.130 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.130 -07 000000487 INF: FPGA: Recv ZSGSRD 30033
17-03-18 01:47:10.140 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.140 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.140 -07 000000462 INF: FPGA: Recv ZSGSRD 30027
17-03-18 01:47:10.150 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.150 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.150 -07 000000461 INF: FPGA: Recv ZSGSRD 30023
17-03-18 01:47:10.160 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.160 -07 000000437 INF: FPGA: Recv ZSGSRD 30025
17-03-18 01:47:10.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.170 -07 000000455 INF: FPGA: Recv ZSGSRD 30028
17-03-18 01:47:10.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.180 -07 000000437 INF: FPGA: Recv ZSGSRD 30033
17-03-18 01:47:10.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.190 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:10.190 -07 000000487 INF: FPGA: Recv ZPIEZORD 25597
17-03-18 01:47:10.200 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.200 -07 000000610 INF: Z Motor: Piezo is near 34.7 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.441 V. Piezo Error = -9.7 V.
17-03-18 01:47:10.200 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30028 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30028 (-132.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30019 (-132.4 uncal um), Max = 30033 (-132.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 01:47:10.200 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30028, posNoise = 5, negNoise = 9
17-03-18 01:47:10.200 -07 000000610 INF: Z Motor: After move to -0.133225, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:10.200 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 109 ms (allowed 150 ms), total time = 1551 ms
17-03-18 01:47:10.200 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:10.250 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 01:47:10.250 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:10.250 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.133229594203933. ----------
17-03-18 01:47:10.250 -07 000000610 INF: Cycle	91	Tile	3	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:10.250 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28927, sync = True, waitForSettling = True)
17-03-18 01:47:10.250 -07 000000610 INF: Z Motor: Moving to -0.132419 mm, started at -0.133230 mm, distance = 0.81 um
17-03-18 01:47:10.250 -07 000000610 INF: FPGA: Xmit ZDACW 28927\n [Z Motor]
17-03-18 01:47:10.260 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:47:10.260 -07 000000610 INF: FPGA: 'ZDACW 28927' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:10.260 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:10.260 -07 000000591 INF: FPGA: Recv ZDACR 28927
17-03-18 01:47:10.270 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.270 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:10.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.420 -07 000000447 INF: FPGA: Recv ZSGSRD 29907
17-03-18 01:47:10.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:10.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.430 -07 000000591 INF: FPGA: Recv ZSGSRD 29908
17-03-18 01:47:10.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.440 -07 000000467 INF: FPGA: Recv ZSGSRD 29905
17-03-18 01:47:10.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.450 -07 000000461 INF: FPGA: Recv ZSGSRD 29903
17-03-18 01:47:10.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.460 -07 000000591 INF: FPGA: Recv ZSGSRD 29904
17-03-18 01:47:10.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.470 -07 000000461 INF: FPGA: Recv ZSGSRD 29899
17-03-18 01:47:10.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.480 -07 000000462 INF: FPGA: Recv ZSGSRD 29903
17-03-18 01:47:10.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.490 -07 000000467 INF: FPGA: Recv ZSGSRD 29907
17-03-18 01:47:10.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.500 -07 000000455 INF: FPGA: Recv ZSGSRD 29906
17-03-18 01:47:10.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:10.510 -07 000000461 INF: FPGA: Recv ZSGSRD 29894
17-03-18 01:47:10.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.520 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:10.520 -07 000000467 INF: FPGA: Recv ZPIEZORD 25410
17-03-18 01:47:10.530 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:10.530 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.414 V. Piezo Error = -9.9 V.
17-03-18 01:47:10.530 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.4 um, Read 10 ADC samples: Avg = 29904 (-131.6 uncal um), Error = 0.8 uncal um, Median = 29904 (-131.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29894 (-131.6 uncal um), Max = 29908 (-131.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 01:47:10.530 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29904, posNoise = 4, negNoise = 10
17-03-18 01:47:10.530 -07 000000610 INF: Z Motor: After move to -0.132419, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:10.530 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:47:10.530 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:10.530 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:10.530 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:10.530 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:10.530 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:10.530 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:10.530 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:10.530 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:10.530 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:10.530 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:10.530 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:10.530 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:10.530 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:10.530 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:10.540 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:10.540 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:10.550 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:47:10.550 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:47:10.550 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 01:47:10.550 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 01:47:10.560 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 29103 150\n [Camera]
17-03-18 01:47:10.760 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:11.150 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:11.150 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:11.150 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:11.150 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:11.150 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:11.150 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:11.150 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:11.150 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 01:47:11.150 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:11.150 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:47:11.340 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29103 776
17-03-18 01:47:11.400 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.004458,
17-03-18 01:47:11.490 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:11.520 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 01:47:11.520 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 01:47:11.520 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:11.530 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 01:47:11.530 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 01:47:11.530 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:11.530 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:11.530 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:11.530 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:47:11.530 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 01:47:11.680 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:11.680 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:11.680 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:11.680 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:11.680 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 01:47:11.680 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:11.680 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:11.680 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:11.680 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:11.680 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 01:47:11.870 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:11.870 -07 000000502 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:11.870 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 29103 150' command took 2 ms to send, 1304 ms to get response, and 1316 ms overall
17-03-18 01:47:11.870 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 01:47:11.870 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 4 at Y-position 61.56396484375, Z-Position -0.132432991898355. ------
17-03-18 01:47:11.870 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:11.870 -07 000000455 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13879 mm
17-03-18 01:47:11.870 -07 000000455 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:11.880 -07 000000447 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:11.880 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 01:47:11.880 -07 000000611 INF: Z Motor: Entering MoveAbsStepped (DAC = 30318, sync = True, waitForSettling = False)
17-03-18 01:47:11.880 -07 000000611 INF: Z Motor: Moving to -0.138787 mm, started at -0.132433 mm, distance = -6.35 um
17-03-18 01:47:11.880 -07 000000487 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:47:11.880 -07 000000592 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 01:47:11.880 -07 000000592 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 01:47:11.890 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:11.890 -07 000000467 INF: FPGA: Recv YRDPOS 126083
17-03-18 01:47:11.900 -07 000000611 INF: FPGA: Xmit ZDACW 30318\n [Z Motor]
17-03-18 01:47:11.900 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 01:47:11.900 -07 000000592 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:11.900 -07 000000592 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:11.900 -07 000000592 INF: Y Motor: Moving 1342 steps-18
17-03-18 01:47:11.900 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 01:47:11.910 -07 000000611 INF: FPGA: 'ZDACW 30318' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 01:47:11.910 -07 000000592 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:11.920 -07 000000611 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:11.920 -07 000000447 INF: FPGA: Recv ZDACR 30318
17-03-18 01:47:11.930 -07 000000611 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:47:11.930 -07 000000611 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-18 01:47:12.060 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:47:12.060 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:47:12.060 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:12.060 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:47:12.060 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 01:47:12.060 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:12.060 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:12.060 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 01:47:12.070 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:12.070 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 01:47:12.080 -07 000000480 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:47:12.080 -07 000000487 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 01:47:12.290 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-18 01:47:12.290 -07 000000592 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 387 ms overall
17-03-18 01:47:12.290 -07 000000437 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:12.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:12.330 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:12.330 -07 000000461 INF: FPGA: Recv YRDPOS 127786
17-03-18 01:47:12.340 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:12.340 -07 000000592 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:12.340 -07 000000592 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 01:47:12.340 -07 000000592 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.839 mm, average velocity = 2.167 mm/sec
17-03-18 01:47:13.290 -07 000000592 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:13.290 -07 000000480 INF: FPGA: Recv YRDPOS 127786
17-03-18 01:47:13.300 -07 000000592 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:13.300 -07 000000592 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:13.320 -07 000000592 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:13.320 -07 000000592 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:13.320 -07 000000592 INF: Y Motor: Moved to 62.3955 after 1442 ms (table move)
17-03-18 01:47:13.330 -07 000000455 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138787 mm (DAC = 30318)
17-03-18 01:47:13.330 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.330 -07 000000487 INF: FPGA: Recv ZSGSRD 30902
17-03-18 01:47:13.340 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:13.340 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.340 -07 000000592 INF: FPGA: Recv ZSGSRD 30889
17-03-18 01:47:13.350 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.350 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.350 -07 000000437 INF: FPGA: Recv ZSGSRD 30883
17-03-18 01:47:13.360 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.360 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.360 -07 000000487 INF: FPGA: Recv ZSGSRD 30892
17-03-18 01:47:13.370 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.370 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.370 -07 000000447 INF: FPGA: Recv ZSGSRD 30900
17-03-18 01:47:13.380 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.380 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.380 -07 000000467 INF: FPGA: Recv ZSGSRD 30892
17-03-18 01:47:13.390 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.390 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.390 -07 000000447 INF: FPGA: Recv ZSGSRD 30903
17-03-18 01:47:13.400 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.400 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.400 -07 000000592 INF: FPGA: Recv ZSGSRD 30890
17-03-18 01:47:13.410 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.410 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.410 -07 000000447 INF: FPGA: Recv ZSGSRD 30899
17-03-18 01:47:13.420 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.420 -07 000000455 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:13.420 -07 000000437 INF: FPGA: Recv ZSGSRD 30891
17-03-18 01:47:13.430 -07 000000455 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.430 -07 000000455 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:13.430 -07 000000447 INF: FPGA: Recv ZPIEZORD 26715
17-03-18 01:47:13.440 -07 000000455 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:13.440 -07 000000455 INF: Z Motor: Piezo is near 37.1 V (nominally 0 to 100 V), expect near 46.3 V, since DAC is at 4.626 V. Piezo Error = -9.2 V.
17-03-18 01:47:13.440 -07 000000455 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.8 um, Read 10 ADC samples: Avg = 30894 (-138.0 uncal um), Error = 0.8 uncal um, Median = 30892 (-138.0 uncal um), StdDev = 7 (0.0 uncal um), Range = 20 (0.1 uncal um), Min = 30883 (-137.9 uncal um), Max = 30903 (-138.1 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 11 (0.1 uncal um)
17-03-18 01:47:13.440 -07 000000455 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30894, posNoise = 9, negNoise = 11
17-03-18 01:47:13.440 -07 000000455 INF: Z Motor: After move to -0.138787, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:13.440 -07 000000455 INF: Z Motor: Settle wait time = 1447 ms, measure time = 111 ms (allowed 150 ms), total time = 1558 ms
17-03-18 01:47:13.440 -07 000000455 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:13.480 -07 000000455 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-18 01:47:13.480 -07 000000455 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:13.480 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:13.480 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:13.480 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:47:13.480 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:13.480 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:13.480 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:13.480 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:13.480 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:47:13.490 -07 000000502 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:13.490 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:47:13.500 -07 000000502 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:47:13.500 -07 000000502 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 01:47:13.500 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:47:13.550 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:47:13.850 -07 000000487 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:47:13.850 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:47:13.850 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:47:13.850 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 673549296, 0x0, 559484976) start.
17-03-18 01:47:13.890 -07 000000447 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:47:13.890 -07 000000611 INF: FPGA: Recv CAMSNAP
17-03-18 01:47:13.890 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 385 ms overall
17-03-18 01:47:13.970 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 673549296, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 01:47:13.970 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:13.980 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 01:47:13.980 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 01:47:13.990 -07 000000579 INF: Autofocus start
17-03-18 01:47:13.990 -07 000000579 INF: MeasureProfile start
17-03-18 01:47:13.990 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:13.990 -07 000000462 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:14.000 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:14.000 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:47:14.000 -07 000000579 INF: MeasureProfile done
17-03-18 01:47:14.000 -07 000000579 INF: X=-32  Z correction [um]=-0.1591732
17-03-18 01:47:14.000 -07 000000579 INF: Autofocus finished
17-03-18 01:47:14.200 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:47:14.200 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:47:14.200 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.138792961918698. ----------
17-03-18 01:47:14.200 -07 000000610 INF: Cycle	91	Tile	4	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:14.210 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28796, sync = True, waitForSettling = True)
17-03-18 01:47:14.210 -07 000000610 INF: Z Motor: Moving to -0.131820 mm, started at -0.138793 mm, distance = 6.97 um
17-03-18 01:47:14.210 -07 000000610 INF: FPGA: Xmit ZDACW 28796\n [Z Motor]
17-03-18 01:47:14.210 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 01:47:14.220 -07 000000610 INF: FPGA: 'ZDACW 28796' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:14.220 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:14.220 -07 000000455 INF: FPGA: Recv ZDACR 28796
17-03-18 01:47:14.230 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.230 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:14.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.380 -07 000000487 INF: FPGA: Recv ZSGSRD 29813
17-03-18 01:47:14.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:14.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.390 -07 000000462 INF: FPGA: Recv ZSGSRD 29810
17-03-18 01:47:14.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.400 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.400 -07 000000455 INF: FPGA: Recv ZSGSRD 29808
17-03-18 01:47:14.410 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.410 -07 000000462 INF: FPGA: Recv ZSGSRD 29802
17-03-18 01:47:14.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.420 -07 000000487 INF: FPGA: Recv ZSGSRD 29807
17-03-18 01:47:14.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.430 -07 000000461 INF: FPGA: Recv ZSGSRD 29812
17-03-18 01:47:14.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.440 -07 000000487 INF: FPGA: Recv ZSGSRD 29809
17-03-18 01:47:14.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.450 -07 000000447 INF: FPGA: Recv ZSGSRD 29808
17-03-18 01:47:14.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.460 -07 000000487 INF: FPGA: Recv ZSGSRD 29811
17-03-18 01:47:14.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:14.470 -07 000000592 INF: FPGA: Recv ZSGSRD 29809
17-03-18 01:47:14.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.480 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:14.480 -07 000000480 INF: FPGA: Recv ZPIEZORD 25301
17-03-18 01:47:14.490 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:14.490 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.394 V. Piezo Error = -9.9 V.
17-03-18 01:47:14.490 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29809 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29809 (-131.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29802 (-131.0 uncal um), Max = 29813 (-131.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:47:14.490 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29809, posNoise = 4, negNoise = 7
17-03-18 01:47:14.490 -07 000000610 INF: Z Motor: After move to -0.131820, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:14.490 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 01:47:14.490 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:14.490 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:14.490 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:14.490 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:14.490 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:14.490 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:14.490 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:14.490 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:14.490 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 01:47:14.490 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:14.490 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:14.490 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:14.500 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:14.500 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:14.500 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:14.500 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:14.510 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 01:47:14.510 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:14.510 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 01:47:14.510 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:14.510 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28972 150\n [Camera]
17-03-18 01:47:14.710 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-18 01:47:15.100 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:15.100 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:15.100 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:15.100 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:15.100 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 01:47:15.230 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:15.240 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:15.240 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:15.240 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:15.240 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:47:15.290 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28972 776
17-03-18 01:47:15.440 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:15.500 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 01:47:15.500 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:47:15.500 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:15.510 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:15.510 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 01:47:15.630 -07 000000611 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 01:47:15.630 -07 000000611 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 01:47:15.630 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:15.630 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 01:47:15.630 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:15.630 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:15.630 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:15.630 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:15.630 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 01:47:15.630 -07 000000611 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 01:47:15.640 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:15.640 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:15.640 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:15.640 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:15.640 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 01:47:15.820 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:15.820 -07 000000461 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:15.820 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28972 150' command took 2 ms to send, 1309 ms to get response, and 1314 ms overall
17-03-18 01:47:15.830 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132518
17-03-18 01:47:15.830 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13252 mm
17-03-18 01:47:15.830 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:15.830 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28948, sync = True, waitForSettling = False)
17-03-18 01:47:15.830 -07 000000579 INF: Z Motor: Moving to -0.132515 mm, started at -0.131823 mm, distance = -0.69 um
17-03-18 01:47:15.830 -07 000000579 INF: FPGA: Xmit ZDACW 28948\n [Z Motor]
17-03-18 01:47:15.830 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 01:47:15.830 -07 000000480 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 01:47:15.830 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 01:47:15.840 -07 000000579 INF: FPGA: 'ZDACW 28948' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:15.840 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:15.840 -07 000000502 INF: FPGA: Recv ZDACR 28948
17-03-18 01:47:15.850 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:15.850 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:15.850 -07 000000579 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet))
17-03-18 01:47:15.850 -07 000000502 INF: FPGA: Recv YRDPOS 127786
17-03-18 01:47:15.860 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 01:47:15.860 -07 000000480 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:15.860 -07 000000480 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:15.860 -07 000000480 INF: Y Motor: Moving 1339 steps-15
17-03-18 01:47:15.860 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:16.030 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 01:47:16.030 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 01:47:16.030 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:16.040 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 01:47:16.040 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 01:47:16.040 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:16.040 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:16.040 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 01:47:16.040 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 409 ms.
17-03-18 01:47:16.050 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 01:47:16.240 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 01:47:16.240 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 372 ms to get response, and 381 ms overall
17-03-18 01:47:16.280 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:16.280 -07 000000611 INF: FPGA: Recv YRDPOS 129483
17-03-18 01:47:16.290 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:16.290 -07 000000480 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:16.290 -07 000000480 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 01:47:16.290 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.837 mm, average velocity = 2.197 mm/sec
17-03-18 01:47:16.760 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.004458,
17-03-18 01:47:17.240 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:17.240 -07 000000591 INF: FPGA: Recv YRDPOS 129483
17-03-18 01:47:17.250 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:17.250 -07 000000480 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:17.270 -07 000000480 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:17.270 -07 000000480 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:17.270 -07 000000480 INF: Y Motor: Moved to 63.2241 after 1443 ms (table move)
17-03-18 01:47:17.280 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132515 mm (DAC = 28948)
17-03-18 01:47:17.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.280 -07 000000502 INF: FPGA: Recv ZSGSRD 29918
17-03-18 01:47:17.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:47:17.290 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.290 -07 000000608 INF: FPGA: Recv ZSGSRD 29922
17-03-18 01:47:17.290 -07 000000437 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:17.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:17.300 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.300 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.300 -07 000000591 INF: FPGA: Recv ZSGSRD 29921
17-03-18 01:47:17.310 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.310 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.310 -07 000000611 INF: FPGA: Recv ZSGSRD 29917
17-03-18 01:47:17.320 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.320 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.320 -07 000000462 INF: FPGA: Recv ZSGSRD 29919
17-03-18 01:47:17.330 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.330 -07 000000608 INF: FPGA: Recv ZSGSRD 29917
17-03-18 01:47:17.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.340 -07 000000502 INF: FPGA: Recv ZSGSRD 29916
17-03-18 01:47:17.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.350 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.350 -07 000000467 INF: FPGA: Recv ZSGSRD 29909
17-03-18 01:47:17.360 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.360 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.360 -07 000000462 INF: FPGA: Recv ZSGSRD 29923
17-03-18 01:47:17.370 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.370 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.370 -07 000000608 INF: FPGA: Recv ZSGSRD 29919
17-03-18 01:47:17.380 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.380 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:17.380 -07 000000487 INF: FPGA: Recv ZPIEZORD 25518
17-03-18 01:47:17.390 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.390 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.417 V. Piezo Error = -9.7 V.
17-03-18 01:47:17.390 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29918 (-131.7 uncal um), Error = 0.8 uncal um, Median = 29918 (-131.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29909 (-131.7 uncal um), Max = 29923 (-131.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 01:47:17.390 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29918, posNoise = 5, negNoise = 9
17-03-18 01:47:17.390 -07 000000610 INF: Z Motor: After move to -0.132515, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:17.390 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms
17-03-18 01:47:17.390 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:17.440 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms
17-03-18 01:47:17.440 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:17.440 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.132522930868339. ----------
17-03-18 01:47:17.440 -07 000000610 INF: Cycle	91	Tile	5	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:17.440 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28772, sync = True, waitForSettling = True)
17-03-18 01:47:17.440 -07 000000610 INF: Z Motor: Moving to -0.131710 mm, started at -0.132523 mm, distance = 0.81 um
17-03-18 01:47:17.440 -07 000000610 INF: FPGA: Xmit ZDACW 28772\n [Z Motor]
17-03-18 01:47:17.450 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 01:47:17.450 -07 000000610 INF: FPGA: 'ZDACW 28772' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 01:47:17.450 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:17.450 -07 000000461 INF: FPGA: Recv ZDACR 28772
17-03-18 01:47:17.460 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:17.460 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:17.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.610 -07 000000437 INF: FPGA: Recv ZSGSRD 29801
17-03-18 01:47:17.620 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:17.620 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.620 -07 000000480 INF: FPGA: Recv ZSGSRD 29791
17-03-18 01:47:17.630 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.630 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.630 -07 000000608 INF: FPGA: Recv ZSGSRD 29791
17-03-18 01:47:17.640 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.640 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.640 -07 000000591 INF: FPGA: Recv ZSGSRD 29791
17-03-18 01:47:17.650 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.650 -07 000000437 INF: FPGA: Recv ZSGSRD 29787
17-03-18 01:47:17.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.660 -07 000000462 INF: FPGA: Recv ZSGSRD 29797
17-03-18 01:47:17.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.670 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.670 -07 000000447 INF: FPGA: Recv ZSGSRD 29785
17-03-18 01:47:17.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.680 -07 000000608 INF: FPGA: Recv ZSGSRD 29793
17-03-18 01:47:17.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.690 -07 000000447 INF: FPGA: Recv ZSGSRD 29793
17-03-18 01:47:17.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:17.700 -07 000000467 INF: FPGA: Recv ZSGSRD 29795
17-03-18 01:47:17.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.710 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:17.710 -07 000000447 INF: FPGA: Recv ZPIEZORD 25345
17-03-18 01:47:17.720 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:17.720 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -9.8 V.
17-03-18 01:47:17.720 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29792 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29792 (-130.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29785 (-130.9 uncal um), Max = 29801 (-131.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:47:17.720 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29792, posNoise = 9, negNoise = 7
17-03-18 01:47:17.720 -07 000000610 INF: Z Motor: After move to -0.131710, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:17.720 -07 000000610 INF: Z Motor: MoveAbsStepped took 272 ms)
17-03-18 01:47:17.720 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:17.720 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:17.720 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:17.720 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:17.720 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:17.720 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:17.720 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:17.720 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:17.720 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:17.720 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:17.720 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 01:47:17.720 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:17.730 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 01:47:17.730 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:17.730 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:17.730 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:17.730 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 01:47:17.730 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:17.740 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 01:47:17.740 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 01:47:17.740 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28948 150\n [Camera]
17-03-18 01:47:17.940 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:18.330 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:18.330 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:18.330 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:18.330 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:18.330 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:47:18.330 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:18.330 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:18.330 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:18.450 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:18.450 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:47:18.520 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28948 776
17-03-18 01:47:18.670 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:18.720 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 01:47:18.720 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:47:18.720 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:18.730 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:18.730 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 01:47:18.840 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 01:47:18.840 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 01:47:18.840 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:18.840 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 01:47:18.850 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 01:47:18.860 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:18.860 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:18.860 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:18.860 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:18.860 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:18.870 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:18.870 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:18.870 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 01:47:18.870 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:18.870 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 01:47:19.050 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:19.050 -07 000000447 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:19.050 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28948 150' command took 2 ms to send, 1308 ms to get response, and 1314 ms overall
17-03-18 01:47:19.060 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132189
17-03-18 01:47:19.060 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13219 mm
17-03-18 01:47:19.060 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:19.060 -07 000000608 INF: Z Motor: Entering MoveAbsStepped (DAC = 28877, sync = True, waitForSettling = False)
17-03-18 01:47:19.060 -07 000000608 INF: Z Motor: Moving to -0.132190 mm, started at -0.131713 mm, distance = -0.48 um
17-03-18 01:47:19.060 -07 000000608 INF: FPGA: Xmit ZDACW 28877\n [Z Motor]
17-03-18 01:47:19.060 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 01:47:19.060 -07 000000467 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 01:47:19.060 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 01:47:19.070 -07 000000608 INF: FPGA: 'ZDACW 28877' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:19.070 -07 000000608 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:19.070 -07 000000480 INF: FPGA: Recv ZDACR 28877
17-03-18 01:47:19.080 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:19.080 -07 000000608 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:19.080 -07 000000608 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet))
17-03-18 01:47:19.080 -07 000000487 INF: FPGA: Recv YRDPOS 129483
17-03-18 01:47:19.090 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 01:47:19.090 -07 000000467 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:19.090 -07 000000467 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:19.090 -07 000000467 INF: Y Motor: Moving 1342 steps-17
17-03-18 01:47:19.090 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:19.270 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 401 ms.
17-03-18 01:47:19.270 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 01:47:19.270 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:19.270 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 01:47:19.270 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 01:47:19.270 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:19.280 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:19.280 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-18 01:47:19.280 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:19.280 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 419 ms.
17-03-18 01:47:19.460 -07 000000487 INF: FPGA: Recv YMVTILE
17-03-18 01:47:19.460 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 01:47:19.510 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:19.510 -07 000000480 INF: FPGA: Recv YRDPOS 131189
17-03-18 01:47:19.520 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:19.520 -07 000000467 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:19.520 -07 000000467 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 01:47:19.520 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.218 mm/sec
17-03-18 01:47:20.470 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:20.470 -07 000000592 INF: FPGA: Recv YRDPOS 131189
17-03-18 01:47:20.480 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:20.480 -07 000000467 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:20.500 -07 000000467 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:20.500 -07 000000467 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:20.500 -07 000000467 INF: Y Motor: Moved to 64.0571 after 1440 ms (table move)
17-03-18 01:47:20.500 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132190 mm (DAC = 28877)
17-03-18 01:47:20.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.500 -07 000000437 INF: FPGA: Recv ZSGSRD 29867
17-03-18 01:47:20.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:20.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.510 -07 000000502 INF: FPGA: Recv ZSGSRD 29870
17-03-18 01:47:20.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.520 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.520 -07 000000480 INF: FPGA: Recv ZSGSRD 29871
17-03-18 01:47:20.530 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.530 -07 000000502 INF: FPGA: Recv ZSGSRD 29871
17-03-18 01:47:20.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.540 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.540 -07 000000480 INF: FPGA: Recv ZSGSRD 29865
17-03-18 01:47:20.550 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.550 -07 000000502 INF: FPGA: Recv ZSGSRD 29864
17-03-18 01:47:20.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.560 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.560 -07 000000480 INF: FPGA: Recv ZSGSRD 29865
17-03-18 01:47:20.570 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.570 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.570 -07 000000502 INF: FPGA: Recv ZSGSRD 29866
17-03-18 01:47:20.580 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.580 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.580 -07 000000480 INF: FPGA: Recv ZSGSRD 29865
17-03-18 01:47:20.590 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.590 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.590 -07 000000608 INF: FPGA: Recv ZSGSRD 29870
17-03-18 01:47:20.600 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.600 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:20.600 -07 000000487 INF: FPGA: Recv ZPIEZORD 25433
17-03-18 01:47:20.610 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.610 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.7 V.
17-03-18 01:47:20.610 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29867 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29866 (-131.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29864 (-131.4 uncal um), Max = 29871 (-131.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 01:47:20.610 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29867, posNoise = 4, negNoise = 3
17-03-18 01:47:20.610 -07 000000610 INF: Z Motor: After move to -0.132190, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:20.610 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 106 ms (allowed 150 ms), total time = 1548 ms
17-03-18 01:47:20.610 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:20.660 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 01:47:20.660 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:20.660 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.13219529604911. ----------
17-03-18 01:47:20.660 -07 000000610 INF: Cycle	91	Tile	6	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:20.660 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28700, sync = True, waitForSettling = True)
17-03-18 01:47:20.660 -07 000000610 INF: Z Motor: Moving to -0.131380 mm, started at -0.132195 mm, distance = 0.82 um
17-03-18 01:47:20.660 -07 000000610 INF: FPGA: Xmit ZDACW 28700\n [Z Motor]
17-03-18 01:47:20.660 -07 000000608 INF: FPGA: Recv ZDACW
17-03-18 01:47:20.670 -07 000000610 INF: FPGA: 'ZDACW 28700' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:20.670 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:20.670 -07 000000447 INF: FPGA: Recv ZDACR 28700
17-03-18 01:47:20.680 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.680 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:20.830 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.830 -07 000000467 INF: FPGA: Recv ZSGSRD 29746
17-03-18 01:47:20.840 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:20.840 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.840 -07 000000608 INF: FPGA: Recv ZSGSRD 29742
17-03-18 01:47:20.850 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.850 -07 000000467 INF: FPGA: Recv ZSGSRD 29746
17-03-18 01:47:20.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.860 -07 000000608 INF: FPGA: Recv ZSGSRD 29734
17-03-18 01:47:20.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.870 -07 000000592 INF: FPGA: Recv ZSGSRD 29737
17-03-18 01:47:20.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.880 -07 000000502 INF: FPGA: Recv ZSGSRD 29742
17-03-18 01:47:20.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.890 -07 000000487 INF: FPGA: Recv ZSGSRD 29736
17-03-18 01:47:20.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.900 -07 000000608 INF: FPGA: Recv ZSGSRD 29743
17-03-18 01:47:20.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.910 -07 000000437 INF: FPGA: Recv ZSGSRD 29745
17-03-18 01:47:20.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:20.920 -07 000000487 INF: FPGA: Recv ZSGSRD 29740
17-03-18 01:47:20.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.930 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:20.930 -07 000000480 INF: FPGA: Recv ZPIEZORD 25268
17-03-18 01:47:20.940 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:20.940 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.379 V. Piezo Error = -9.8 V.
17-03-18 01:47:20.940 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29741 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29742 (-130.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29734 (-130.6 uncal um), Max = 29746 (-130.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:47:20.940 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29741, posNoise = 5, negNoise = 7
17-03-18 01:47:20.940 -07 000000610 INF: Z Motor: After move to -0.131380, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:20.940 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:47:20.940 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:20.940 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:20.940 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:20.940 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:20.940 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:20.940 -07 000000611 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:20.940 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:20.940 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:20.940 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:20.940 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:20.940 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:20.940 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:20.950 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:20.950 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:20.950 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:20.950 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:20.960 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:47:20.960 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:20.960 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:47:20.960 -07 000000437 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:20.960 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28877 150\n [Camera]
17-03-18 01:47:21.160 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:21.560 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:21.560 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:21.560 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:21.560 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:21.560 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) start.
17-03-18 01:47:21.560 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:21.560 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:21.560 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:21.560 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:21.560 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:47:21.750 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28877 776
17-03-18 01:47:21.900 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:21.930 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2369425112, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 01:47:21.930 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 01:47:21.930 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:21.930 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 01:47:21.930 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 01:47:21.930 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:21.940 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:21.940 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:47:21.940 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:21.950 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 01:47:22.090 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:22.090 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:22.090 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:22.090 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:22.090 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 01:47:22.090 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:22.090 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:22.090 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:22.090 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:22.090 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:47:22.120 -07 000000437 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.981281,
17-03-18 01:47:22.280 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:22.280 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:22.280 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28877 150' command took 2 ms to send, 1303 ms to get response, and 1313 ms overall
17-03-18 01:47:22.280 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.132005
17-03-18 01:47:22.280 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13200 mm
17-03-18 01:47:22.280 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:22.280 -07 000000502 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 01:47:22.280 -07 000000502 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 01:47:22.280 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:22.290 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28836, sync = True, waitForSettling = False)
17-03-18 01:47:22.290 -07 000000579 INF: Z Motor: Moving to -0.132003 mm, started at -0.131386 mm, distance = -0.62 um
17-03-18 01:47:22.290 -07 000000579 INF: FPGA: Xmit ZDACW 28836\n [Z Motor]
17-03-18 01:47:22.290 -07 000000461 INF: FPGA: Recv YRDPOS 131189
17-03-18 01:47:22.290 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 01:47:22.290 -07 000000502 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:22.290 -07 000000502 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:22.290 -07 000000502 INF: Y Motor: Moving 1337 steps-11
17-03-18 01:47:22.290 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 01:47:22.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:22.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:22.300 -07 000000579 INF: FPGA: 'ZDACW 28836' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:22.300 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:22.300 -07 000000592 INF: FPGA: Recv ZDACR 28836
17-03-18 01:47:22.310 -07 000000502 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:22.310 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:22.310 -07 000000579 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 01:47:22.470 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:47:22.470 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:47:22.470 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:22.470 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 01:47:22.470 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 01:47:22.470 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:22.470 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:22.470 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 01:47:22.470 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:22.480 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 01:47:22.680 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 01:47:22.680 -07 000000502 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 01:47:22.720 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:22.730 -07 000000480 INF: FPGA: Recv YRDPOS 132872
17-03-18 01:47:22.730 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 01:47:22.730 -07 000000502 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:22.730 -07 000000502 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 01:47:22.730 -07 000000502 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.835 mm, average velocity = 2.115 mm/sec
17-03-18 01:47:23.680 -07 000000502 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:23.680 -07 000000447 INF: FPGA: Recv YRDPOS 132872
17-03-18 01:47:23.690 -07 000000502 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.690 -07 000000502 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:23.710 -07 000000502 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:23.710 -07 000000502 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:23.710 -07 000000502 INF: Y Motor: Moved to 64.8789 after 1428 ms (table move)
17-03-18 01:47:23.720 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132003 mm (DAC = 28836)
17-03-18 01:47:23.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.720 -07 000000467 INF: FPGA: Recv ZSGSRD 29838
17-03-18 01:47:23.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:23.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.730 -07 000000487 INF: FPGA: Recv ZSGSRD 29832
17-03-18 01:47:23.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.740 -07 000000502 INF: FPGA: Recv ZSGSRD 29833
17-03-18 01:47:23.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.750 -07 000000592 INF: FPGA: Recv ZSGSRD 29843
17-03-18 01:47:23.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.760 -07 000000447 INF: FPGA: Recv ZSGSRD 29844
17-03-18 01:47:23.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.770 -07 000000480 INF: FPGA: Recv ZSGSRD 29837
17-03-18 01:47:23.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.780 -07 000000608 INF: FPGA: Recv ZSGSRD 29840
17-03-18 01:47:23.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.790 -07 000000455 INF: FPGA: Recv ZSGSRD 29839
17-03-18 01:47:23.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.800 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.800 -07 000000611 INF: FPGA: Recv ZSGSRD 29832
17-03-18 01:47:23.810 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.810 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:23.810 -07 000000608 INF: FPGA: Recv ZSGSRD 29836
17-03-18 01:47:23.820 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.820 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:23.820 -07 000000579 INF: FPGA: Recv ZPIEZORD 25436
17-03-18 01:47:23.830 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.830 -07 000000610 INF: Z Motor: Piezo is near 34.3 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.400 V. Piezo Error = -9.7 V.
17-03-18 01:47:23.830 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.0 um, Read 10 ADC samples: Avg = 29837 (-131.2 uncal um), Error = 0.8 uncal um, Median = 29838 (-131.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29832 (-131.2 uncal um), Max = 29844 (-131.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:23.830 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29837, posNoise = 7, negNoise = 5
17-03-18 01:47:23.830 -07 000000610 INF: Z Motor: After move to -0.132003, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:23.830 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 109 ms (allowed 150 ms), total time = 1540 ms
17-03-18 01:47:23.830 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:23.880 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1594 ms
17-03-18 01:47:23.880 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:23.880 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.132002569684857. ----------
17-03-18 01:47:23.880 -07 000000610 INF: Cycle	91	Tile	7	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:23.880 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28660, sync = True, waitForSettling = True)
17-03-18 01:47:23.880 -07 000000610 INF: Z Motor: Moving to -0.131197 mm, started at -0.132003 mm, distance = 0.81 um
17-03-18 01:47:23.880 -07 000000610 INF: FPGA: Xmit ZDACW 28660\n [Z Motor]
17-03-18 01:47:23.880 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 01:47:23.890 -07 000000610 INF: FPGA: 'ZDACW 28660' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:47:23.890 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:23.890 -07 000000487 INF: FPGA: Recv ZDACR 28660
17-03-18 01:47:23.900 -07 000000610 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:23.900 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:24.050 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.050 -07 000000461 INF: FPGA: Recv ZSGSRD 29706
17-03-18 01:47:24.060 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:24.060 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.060 -07 000000455 INF: FPGA: Recv ZSGSRD 29717
17-03-18 01:47:24.070 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.070 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.070 -07 000000467 INF: FPGA: Recv ZSGSRD 29721
17-03-18 01:47:24.080 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.080 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.080 -07 000000455 INF: FPGA: Recv ZSGSRD 29718
17-03-18 01:47:24.090 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.090 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.090 -07 000000437 INF: FPGA: Recv ZSGSRD 29710
17-03-18 01:47:24.100 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.100 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.100 -07 000000467 INF: FPGA: Recv ZSGSRD 29711
17-03-18 01:47:24.110 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.110 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.110 -07 000000611 INF: FPGA: Recv ZSGSRD 29714
17-03-18 01:47:24.120 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.120 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.120 -07 000000462 INF: FPGA: Recv ZSGSRD 29707
17-03-18 01:47:24.130 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.130 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.130 -07 000000467 INF: FPGA: Recv ZSGSRD 29709
17-03-18 01:47:24.140 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.140 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:24.140 -07 000000462 INF: FPGA: Recv ZSGSRD 29712
17-03-18 01:47:24.150 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.150 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:24.150 -07 000000611 INF: FPGA: Recv ZPIEZORD 25253
17-03-18 01:47:24.160 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:24.160 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.373 V. Piezo Error = -9.8 V.
17-03-18 01:47:24.160 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29712 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29712 (-130.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29706 (-130.4 uncal um), Max = 29721 (-130.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:47:24.160 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29712, posNoise = 9, negNoise = 6
17-03-18 01:47:24.160 -07 000000610 INF: Z Motor: After move to -0.131197, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:24.160 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:47:24.160 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:24.160 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:24.160 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:24.160 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:24.160 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:24.160 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:24.160 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:24.160 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:24.160 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:24.160 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:24.160 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:24.160 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:24.170 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:24.170 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:24.170 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 01:47:24.170 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:24.180 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:47:24.180 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:24.180 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:47:24.180 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:24.180 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28836 150\n [Camera]
17-03-18 01:47:24.380 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:24.780 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:24.780 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:24.780 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:24.780 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:24.780 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 01:47:24.780 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:24.780 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:24.780 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:24.780 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:24.780 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 01:47:24.970 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28836 776
17-03-18 01:47:25.120 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:25.180 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 01:47:25.180 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 01:47:25.180 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:25.180 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 01:47:25.180 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 01:47:25.180 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:25.180 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:25.180 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms.
17-03-18 01:47:25.180 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:25.190 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 01:47:25.310 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:25.310 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:25.310 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:25.310 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:25.310 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 01:47:25.310 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:25.310 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:25.310 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:25.440 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:25.440 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:47:25.500 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:25.500 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:25.500 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28836 150' command took 2 ms to send, 1302 ms to get response, and 1313 ms overall
17-03-18 01:47:25.500 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 01:47:25.500 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 8 at Y-position 64.87890625, Z-Position -0.131199543167137. ------
17-03-18 01:47:25.500 -07 000000611 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:25.510 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13780 mm
17-03-18 01:47:25.510 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:25.510 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:25.510 -07 000000611 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 01:47:25.510 -07 000000611 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:47:25.510 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 01:47:25.510 -07 000000461 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 01:47:25.510 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 30102, sync = True, waitForSettling = False)
17-03-18 01:47:25.510 -07 000000592 INF: Z Motor: Moving to -0.137798 mm, started at -0.131200 mm, distance = -6.60 um
17-03-18 01:47:25.520 -07 000000592 INF: FPGA: Xmit ZDACW 30102\n [Z Motor]
17-03-18 01:47:25.520 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:47:25.530 -07 000000592 INF: FPGA: 'ZDACW 30102' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 01:47:25.530 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:25.530 -07 000000480 INF: FPGA: Recv YRDPOS 132872
17-03-18 01:47:25.540 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 01:47:25.540 -07 000000461 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:25.540 -07 000000461 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:25.540 -07 000000461 INF: Y Motor: Moving 1350 steps-28
17-03-18 01:47:25.540 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:25.540 -07 000000467 INF: FPGA: Recv ZDACR 30102
17-03-18 01:47:25.550 -07 000000592 INF: FPGA: 'ZDACR' command took 3 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:47:25.550 -07 000000592 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 01:47:25.550 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:25.690 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 01:47:25.690 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 01:47:25.690 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:25.700 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 01:47:25.700 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 01:47:25.710 -07 000000437 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:47:25.710 -07 000000611 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 198 ms to get response, and 205 ms overall
17-03-18 01:47:25.810 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 01:47:25.810 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 01:47:25.810 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:25.810 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:25.820 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 508 ms.
17-03-18 01:47:25.920 -07 000000480 INF: FPGA: Recv YMVTILE
17-03-18 01:47:25.920 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 01:47:25.970 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:25.970 -07 000000608 INF: FPGA: Recv YRDPOS 134582
17-03-18 01:47:25.980 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:25.980 -07 000000461 INF: Y Motor: Encoder = 134582 = motor step 105142.2 = 65.7139 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:25.980 -07 000000461 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 01:47:25.980 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-18 01:47:26.930 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:26.930 -07 000000467 INF: FPGA: Recv YRDPOS 134583
17-03-18 01:47:26.940 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:26.940 -07 000000461 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:26.960 -07 000000461 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:26.960 -07 000000461 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:47:26.960 -07 000000461 INF: Y Motor: Moved to 65.7144 after 1455 ms (table move)
17-03-18 01:47:26.970 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.137798 mm (DAC = 30102)
17-03-18 01:47:26.970 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:26.970 -07 000000487 INF: FPGA: Recv ZSGSRD 30742
17-03-18 01:47:26.980 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:47:26.980 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:26.980 -07 000000467 INF: FPGA: Recv ZSGSRD 30749
17-03-18 01:47:26.990 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:26.990 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:26.990 -07 000000480 INF: FPGA: Recv ZSGSRD 30749
17-03-18 01:47:27.000 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.000 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.000 -07 000000487 INF: FPGA: Recv ZSGSRD 30733
17-03-18 01:47:27.010 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.010 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.010 -07 000000461 INF: FPGA: Recv ZSGSRD 30732
17-03-18 01:47:27.020 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.020 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.020 -07 000000480 INF: FPGA: Recv ZSGSRD 30742
17-03-18 01:47:27.030 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.030 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.030 -07 000000461 INF: FPGA: Recv ZSGSRD 30738
17-03-18 01:47:27.040 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.040 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.040 -07 000000467 INF: FPGA: Recv ZSGSRD 30740
17-03-18 01:47:27.050 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.050 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.050 -07 000000447 INF: FPGA: Recv ZSGSRD 30743
17-03-18 01:47:27.060 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.060 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:27.060 -07 000000480 INF: FPGA: Recv ZSGSRD 30747
17-03-18 01:47:27.070 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.070 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:27.070 -07 000000447 INF: FPGA: Recv ZPIEZORD 26598
17-03-18 01:47:27.080 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.080 -07 000000502 INF: Z Motor: Piezo is near 36.8 V (nominally 0 to 100 V), expect near 45.9 V, since DAC is at 4.593 V. Piezo Error = -9.1 V.
17-03-18 01:47:27.080 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.8 um, Read 10 ADC samples: Avg = 30742 (-137.0 uncal um), Error = 0.8 uncal um, Median = 30742 (-137.0 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 30732 (-137.0 uncal um), Max = 30749 (-137.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 10 (0.1 uncal um)
17-03-18 01:47:27.080 -07 000000502 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30742, posNoise = 7, negNoise = 10
17-03-18 01:47:27.080 -07 000000502 INF: Z Motor: After move to -0.137798, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:27.080 -07 000000502 INF: Z Motor: Settle wait time = 1458 ms, measure time = 108 ms (allowed 150 ms), total time = 1566 ms
17-03-18 01:47:27.080 -07 000000502 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:27.130 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1618 ms
17-03-18 01:47:27.130 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:27.130 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:27.130 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:27.130 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:27.130 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:27.130 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:47:27.130 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:27.140 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:27.140 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:47:27.140 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:27.140 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:47:27.150 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:47:27.150 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 01:47:27.150 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:47:27.200 -07 000000579 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:47:27.290 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:27.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:27.490 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.983999,
17-03-18 01:47:27.500 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:47:27.500 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:47:27.500 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:47:27.500 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) start.
17-03-18 01:47:27.540 -07 000000502 INF: FPGA: Recv @CAMSNAP 382
17-03-18 01:47:27.540 -07 000000467 INF: FPGA: Recv CAMSNAP
17-03-18 01:47:27.540 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 387 ms overall
17-03-18 01:47:27.630 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 2281705520, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 01:47:27.630 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:27.630 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 01:47:27.630 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 01:47:27.640 -07 000000608 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:27.640 -07 000000447 INF: Autofocus start
17-03-18 01:47:27.640 -07 000000447 INF: MeasureProfile start
17-03-18 01:47:27.640 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:27.650 -07 000000608 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:27.650 -07 000000608 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:47:27.650 -07 000000447 INF: MeasureProfile done
17-03-18 01:47:27.650 -07 000000447 INF: X=16  Z correction [um]=0.0530179
17-03-18 01:47:27.650 -07 000000447 INF: Autofocus finished
17-03-18 01:47:27.850 -07 000000592 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:47:27.850 -07 000000608 INF: FPGA: 'FOCMRRIMG' command took 1 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:47:27.850 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.13781648167315. ----------
17-03-18 01:47:27.850 -07 000000610 INF: Cycle	91	Tile	8	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:27.860 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28626, sync = True, waitForSettling = True)
17-03-18 01:47:27.860 -07 000000610 INF: Z Motor: Moving to -0.131041 mm, started at -0.137816 mm, distance = 6.78 um
17-03-18 01:47:27.860 -07 000000610 INF: FPGA: Xmit ZDACW 28626\n [Z Motor]
17-03-18 01:47:27.860 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 01:47:27.870 -07 000000610 INF: FPGA: 'ZDACW 28626' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:27.870 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:27.870 -07 000000502 INF: FPGA: Recv ZDACR 28626
17-03-18 01:47:27.880 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:27.880 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:28.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.030 -07 000000592 INF: FPGA: Recv ZSGSRD 29688
17-03-18 01:47:28.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:28.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.040 -07 000000502 INF: FPGA: Recv ZSGSRD 29685
17-03-18 01:47:28.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.050 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.050 -07 000000592 INF: FPGA: Recv ZSGSRD 29688
17-03-18 01:47:28.060 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.060 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.060 -07 000000455 INF: FPGA: Recv ZSGSRD 29692
17-03-18 01:47:28.070 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.070 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.070 -07 000000579 INF: FPGA: Recv ZSGSRD 29692
17-03-18 01:47:28.080 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.080 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.080 -07 000000437 INF: FPGA: Recv ZSGSRD 29693
17-03-18 01:47:28.090 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.090 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.090 -07 000000462 INF: FPGA: Recv ZSGSRD 29687
17-03-18 01:47:28.100 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.100 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.100 -07 000000579 INF: FPGA: Recv ZSGSRD 29692
17-03-18 01:47:28.110 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.110 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.110 -07 000000487 INF: FPGA: Recv ZSGSRD 29687
17-03-18 01:47:28.120 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.120 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:28.120 -07 000000461 INF: FPGA: Recv ZSGSRD 29688
17-03-18 01:47:28.130 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.130 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:28.130 -07 000000502 INF: FPGA: Recv ZPIEZORD 25222
17-03-18 01:47:28.140 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:28.140 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.368 V. Piezo Error = -9.8 V.
17-03-18 01:47:28.140 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29689 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29688 (-130.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29685 (-130.2 uncal um), Max = 29693 (-130.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:47:28.140 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29689, posNoise = 4, negNoise = 4
17-03-18 01:47:28.140 -07 000000610 INF: Z Motor: After move to -0.131041, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:28.140 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 01:47:28.140 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:28.140 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:28.140 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:28.140 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:28.140 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:28.140 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:28.140 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:28.140 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:28.140 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:28.140 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:28.140 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:28.140 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:28.140 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:47:28.140 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:28.150 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:28.150 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:28.160 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 01:47:28.160 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 01:47:28.160 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 01:47:28.160 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 01:47:28.160 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28803 150\n [Camera]
17-03-18 01:47:28.360 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:28.750 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:28.750 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:28.750 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:28.760 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:28.760 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:28.760 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:28.760 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:28.760 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) start.
17-03-18 01:47:28.760 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:28.760 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2300786904, 0x0, 391868352) start.
17-03-18 01:47:28.940 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28803 776
17-03-18 01:47:29.090 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:29.130 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2369425112, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 01:47:29.130 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 01:47:29.130 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:29.130 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:29.130 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 2300786904, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 01:47:29.130 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 01:47:29.130 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:29.140 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:29.140 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:47:29.140 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 01:47:29.280 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:29.280 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:29.280 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:29.400 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:29.400 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:29.400 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:29.400 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:29.400 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 01:47:29.410 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:29.410 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 01:47:29.470 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:29.470 -07 000000611 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:29.480 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28803 150' command took 2 ms to send, 1309 ms to get response, and 1313 ms overall
17-03-18 01:47:29.480 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131423
17-03-18 01:47:29.480 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13142 mm
17-03-18 01:47:29.480 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:29.480 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 01:47:29.480 -07 000000455 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 01:47:29.480 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 28709, sync = True, waitForSettling = False)
17-03-18 01:47:29.480 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:29.480 -07 000000462 INF: Z Motor: Moving to -0.131421 mm, started at -0.131052 mm, distance = -0.37 um
17-03-18 01:47:29.480 -07 000000487 INF: FPGA: Recv YRDPOS 134583
17-03-18 01:47:29.490 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:29.490 -07 000000455 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:29.490 -07 000000455 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:29.490 -07 000000455 INF: Y Motor: Moving 1341 steps-18
17-03-18 01:47:29.490 -07 000000462 INF: FPGA: Xmit ZDACW 28709\n [Z Motor]
17-03-18 01:47:29.490 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:47:29.500 -07 000000462 INF: FPGA: 'ZDACW 28709' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 01:47:29.500 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:29.500 -07 000000461 INF: FPGA: Recv ZDACR 28709
17-03-18 01:47:29.510 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:29.510 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:29.510 -07 000000462 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 01:47:29.800 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 01:47:29.800 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 01:47:29.800 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:29.800 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 01:47:29.800 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 01:47:29.800 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:29.800 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:29.800 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-18 01:47:29.800 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:29.810 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 01:47:29.880 -07 000000487 INF: FPGA: Recv YMVTILE
17-03-18 01:47:29.880 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:47:29.930 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:29.930 -07 000000608 INF: FPGA: Recv YRDPOS 136272
17-03-18 01:47:29.940 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:29.940 -07 000000455 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:29.940 -07 000000455 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 01:47:29.940 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.838 mm, average velocity = 2.106 mm/sec
17-03-18 01:47:30.890 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:30.890 -07 000000447 INF: FPGA: Recv YRDPOS 136272
17-03-18 01:47:30.900 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.900 -07 000000455 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:30.920 -07 000000455 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:30.920 -07 000000455 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:30.920 -07 000000455 INF: Y Motor: Moved to 66.5391 after 1442 ms (table move)
17-03-18 01:47:30.930 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131421 mm (DAC = 28709)
17-03-18 01:47:30.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.930 -07 000000447 INF: FPGA: Recv ZSGSRD 29747
17-03-18 01:47:30.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.940 -07 000000608 INF: FPGA: Recv ZSGSRD 29742
17-03-18 01:47:30.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.950 -07 000000502 INF: FPGA: Recv ZSGSRD 29752
17-03-18 01:47:30.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.960 -07 000000608 INF: FPGA: Recv ZSGSRD 29751
17-03-18 01:47:30.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.970 -07 000000480 INF: FPGA: Recv ZSGSRD 29749
17-03-18 01:47:30.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.980 -07 000000455 INF: FPGA: Recv ZSGSRD 29747
17-03-18 01:47:30.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:30.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:30.990 -07 000000579 INF: FPGA: Recv ZSGSRD 29743
17-03-18 01:47:31.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.000 -07 000000608 INF: FPGA: Recv ZSGSRD 29744
17-03-18 01:47:31.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.010 -07 000000579 INF: FPGA: Recv ZSGSRD 29748
17-03-18 01:47:31.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.020 -07 000000467 INF: FPGA: Recv ZSGSRD 29745
17-03-18 01:47:31.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.030 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:31.030 -07 000000437 INF: FPGA: Recv ZPIEZORD 25333
17-03-18 01:47:31.040 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.040 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.381 V. Piezo Error = -9.7 V.
17-03-18 01:47:31.040 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29747 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29747 (-130.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29742 (-130.6 uncal um), Max = 29752 (-130.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:31.040 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29747, posNoise = 5, negNoise = 5
17-03-18 01:47:31.040 -07 000000610 INF: Z Motor: After move to -0.131421, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:31.040 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 110 ms (allowed 150 ms), total time = 1554 ms
17-03-18 01:47:31.040 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:31.080 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-18 01:47:31.080 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:31.080 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.131424390592098. ----------
17-03-18 01:47:31.080 -07 000000610 INF: Cycle	91	Tile	9	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:31.080 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28533, sync = True, waitForSettling = True)
17-03-18 01:47:31.080 -07 000000610 INF: Z Motor: Moving to -0.130616 mm, started at -0.131424 mm, distance = 0.81 um
17-03-18 01:47:31.080 -07 000000610 INF: FPGA: Xmit ZDACW 28533\n [Z Motor]
17-03-18 01:47:31.080 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 01:47:31.090 -07 000000610 INF: FPGA: 'ZDACW 28533' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:31.090 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:31.090 -07 000000455 INF: FPGA: Recv ZDACR 28533
17-03-18 01:47:31.100 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.100 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:31.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.250 -07 000000467 INF: FPGA: Recv ZSGSRD 29621
17-03-18 01:47:31.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:31.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.260 -07 000000455 INF: FPGA: Recv ZSGSRD 29627
17-03-18 01:47:31.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.270 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.270 -07 000000467 INF: FPGA: Recv ZSGSRD 29630
17-03-18 01:47:31.280 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.280 -07 000000455 INF: FPGA: Recv ZSGSRD 29623
17-03-18 01:47:31.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.290 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.290 -07 000000461 INF: FPGA: Recv ZSGSRD 29623
17-03-18 01:47:31.300 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.300 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.300 -07 000000467 INF: FPGA: Recv ZSGSRD 29627
17-03-18 01:47:31.310 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.310 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.310 -07 000000455 INF: FPGA: Recv ZSGSRD 29626
17-03-18 01:47:31.320 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.320 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.320 -07 000000592 INF: FPGA: Recv ZSGSRD 29620
17-03-18 01:47:31.330 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.330 -07 000000579 INF: FPGA: Recv ZSGSRD 29623
17-03-18 01:47:31.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:31.340 -07 000000447 INF: FPGA: Recv ZSGSRD 29623
17-03-18 01:47:31.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.350 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:31.350 -07 000000487 INF: FPGA: Recv ZPIEZORD 25156
17-03-18 01:47:31.360 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:31.360 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -9.8 V.
17-03-18 01:47:31.360 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29624 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29623 (-129.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29620 (-129.8 uncal um), Max = 29630 (-129.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:47:31.360 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29624, posNoise = 6, negNoise = 4
17-03-18 01:47:31.360 -07 000000610 INF: Z Motor: After move to -0.130616, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:31.360 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:47:31.360 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:31.360 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:31.360 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:31.360 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:31.360 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:31.360 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:31.360 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:31.360 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:31.360 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:31.360 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:31.360 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:31.360 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:31.370 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:31.370 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:31.370 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:47:31.370 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:31.380 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 01:47:31.380 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:31.380 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 01:47:31.380 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:31.380 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28709 150\n [Camera]
17-03-18 01:47:31.580 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:31.970 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:31.970 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:31.970 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:31.970 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:31.970 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2296381600, 0x0, 391868352) start.
17-03-18 01:47:31.970 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:31.970 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:31.970 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:31.970 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:31.970 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2331803864, 0x0, 418435064) start.
17-03-18 01:47:32.160 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28709 776
17-03-18 01:47:32.290 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:32.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:32.310 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:32.350 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2331803864, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 01:47:32.350 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 01:47:32.350 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:32.350 -07 000000608 INF: Camera: sBCa_ReadImage(785074288, 2296381600, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 01:47:32.350 -07 000000608 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 01:47:32.350 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:32.350 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:32.350 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:32.350 -07 000000608 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 01:47:32.360 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 01:47:32.500 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:32.500 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:32.500 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:32.500 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:32.500 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2367226128, 0x0, 391868352) start.
17-03-18 01:47:32.500 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:32.500 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:32.500 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:32.500 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:32.500 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 01:47:32.690 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:32.690 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:32.690 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28709 150' command took 2 ms to send, 1307 ms to get response, and 1313 ms overall
17-03-18 01:47:32.690 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131478
17-03-18 01:47:32.690 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13148 mm
17-03-18 01:47:32.690 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:32.700 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28721, sync = True, waitForSettling = False)
17-03-18 01:47:32.700 -07 000000579 INF: Z Motor: Moving to -0.131476 mm, started at -0.130634 mm, distance = -0.84 um
17-03-18 01:47:32.700 -07 000000579 INF: FPGA: Xmit ZDACW 28721\n [Z Motor]
17-03-18 01:47:32.700 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 01:47:32.700 -07 000000608 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 01:47:32.700 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 01:47:32.710 -07 000000579 INF: FPGA: 'ZDACW 28721' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:32.710 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:32.710 -07 000000467 INF: FPGA: Recv ZDACR 28721
17-03-18 01:47:32.720 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:32.720 -07 000000579 INF: Z Motor: MoveAbsStepped took 16 ms (did NOT wait for settling yet))
17-03-18 01:47:32.720 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:32.720 -07 000000579 INF: FPGA: Recv YRDPOS 136272
17-03-18 01:47:32.730 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 01:47:32.730 -07 000000608 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:32.730 -07 000000608 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:32.730 -07 000000608 INF: Y Motor: Moving 1350 steps-28
17-03-18 01:47:32.730 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:32.850 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.005817,
17-03-18 01:47:32.900 -07 000000611 INF: Camera: sBCa_ReadImage(785074288, 2367226128, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 01:47:32.900 -07 000000611 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:47:32.900 -07 000000611 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:32.910 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 01:47:32.910 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 01:47:32.910 -07 000000592 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:32.910 -07 000000611 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:32.910 -07 000000611 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 01:47:32.910 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:32.920 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 01:47:33.100 -07 000000437 INF: FPGA: Recv YMVTILE
17-03-18 01:47:33.100 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 01:47:33.150 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:33.150 -07 000000480 INF: FPGA: Recv YRDPOS 137977
17-03-18 01:47:33.160 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:33.160 -07 000000608 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:33.160 -07 000000608 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 01:47:33.160 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.844 mm, average velocity = 2.232 mm/sec
17-03-18 01:47:34.110 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:34.110 -07 000000447 INF: FPGA: Recv YRDPOS 137978
17-03-18 01:47:34.120 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.120 -07 000000608 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:34.140 -07 000000608 INF: Y Motor: After move to 67.382607, error = -0.010536, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:34.140 -07 000000608 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:47:34.140 -07 000000608 INF: Y Motor: Moved to 67.3721 after 1442 ms (table move)
17-03-18 01:47:34.140 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131476 mm (DAC = 28721)
17-03-18 01:47:34.140 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.150 -07 000000462 INF: FPGA: Recv ZSGSRD 29762
17-03-18 01:47:34.160 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:34.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.160 -07 000000608 INF: FPGA: Recv ZSGSRD 29754
17-03-18 01:47:34.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.170 -07 000000462 INF: FPGA: Recv ZSGSRD 29760
17-03-18 01:47:34.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.180 -07 000000608 INF: FPGA: Recv ZSGSRD 29756
17-03-18 01:47:34.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.190 -07 000000592 INF: FPGA: Recv ZSGSRD 29753
17-03-18 01:47:34.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.200 -07 000000608 INF: FPGA: Recv ZSGSRD 29752
17-03-18 01:47:34.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.210 -07 000000592 INF: FPGA: Recv ZSGSRD 29755
17-03-18 01:47:34.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.220 -07 000000608 INF: FPGA: Recv ZSGSRD 29758
17-03-18 01:47:34.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.230 -07 000000579 INF: FPGA: Recv ZSGSRD 29757
17-03-18 01:47:34.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.240 -07 000000462 INF: FPGA: Recv ZSGSRD 29759
17-03-18 01:47:34.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.250 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:34.250 -07 000000592 INF: FPGA: Recv ZPIEZORD 25334
17-03-18 01:47:34.260 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.260 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.383 V. Piezo Error = -9.7 V.
17-03-18 01:47:34.260 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29757 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29756 (-130.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29752 (-130.7 uncal um), Max = 29762 (-130.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:34.260 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29757, posNoise = 5, negNoise = 5
17-03-18 01:47:34.260 -07 000000610 INF: Z Motor: After move to -0.131476, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:34.260 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 111 ms (allowed 150 ms), total time = 1556 ms
17-03-18 01:47:34.260 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:34.300 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 01:47:34.300 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:34.300 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.3720703125, Z-position -0.131488632713516. ----------
17-03-18 01:47:34.300 -07 000000610 INF: Cycle	91	Tile	10	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:34.300 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28545, sync = True, waitForSettling = True)
17-03-18 01:47:34.300 -07 000000610 INF: Z Motor: Moving to -0.130671 mm, started at -0.131489 mm, distance = 0.82 um
17-03-18 01:47:34.300 -07 000000610 INF: FPGA: Xmit ZDACW 28545\n [Z Motor]
17-03-18 01:47:34.300 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 01:47:34.310 -07 000000610 INF: FPGA: 'ZDACW 28545' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:34.310 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:34.310 -07 000000480 INF: FPGA: Recv ZDACR 28545
17-03-18 01:47:34.320 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.320 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:34.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.470 -07 000000437 INF: FPGA: Recv ZSGSRD 29631
17-03-18 01:47:34.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:34.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.480 -07 000000592 INF: FPGA: Recv ZSGSRD 29635
17-03-18 01:47:34.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.490 -07 000000579 INF: FPGA: Recv ZSGSRD 29635
17-03-18 01:47:34.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.500 -07 000000592 INF: FPGA: Recv ZSGSRD 29632
17-03-18 01:47:34.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.510 -07 000000437 INF: FPGA: Recv ZSGSRD 29626
17-03-18 01:47:34.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.520 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.520 -07 000000480 INF: FPGA: Recv ZSGSRD 29624
17-03-18 01:47:34.530 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.530 -07 000000437 INF: FPGA: Recv ZSGSRD 29638
17-03-18 01:47:34.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.540 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.540 -07 000000592 INF: FPGA: Recv ZSGSRD 29633
17-03-18 01:47:34.550 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.550 -07 000000592 INF: FPGA: Recv ZSGSRD 29631
17-03-18 01:47:34.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.560 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:34.560 -07 000000455 INF: FPGA: Recv ZSGSRD 29630
17-03-18 01:47:34.570 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.570 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:34.570 -07 000000579 INF: FPGA: Recv ZPIEZORD 25179
17-03-18 01:47:34.580 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:34.580 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.8 V.
17-03-18 01:47:34.580 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29632 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29632 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29624 (-129.9 uncal um), Max = 29638 (-129.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:47:34.580 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29632, posNoise = 6, negNoise = 8
17-03-18 01:47:34.580 -07 000000610 INF: Z Motor: After move to -0.130671, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:34.580 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:47:34.580 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:34.580 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:34.580 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:34.580 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:34.580 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:34.580 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:34.580 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:34.580 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:34.580 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:34.580 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:34.580 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:34.580 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:34.590 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:34.590 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:34.590 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:34.590 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:34.600 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 01:47:34.600 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 01:47:34.600 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:47:34.600 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 01:47:34.610 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28721 150\n [Camera]
17-03-18 01:47:34.810 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:35.200 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:35.200 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:35.200 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:35.200 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:35.200 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:47:35.200 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:35.200 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:35.200 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:35.200 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:35.200 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:47:35.390 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28721 776
17-03-18 01:47:35.540 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:35.580 -07 000000608 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 01:47:35.580 -07 000000608 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 01:47:35.580 -07 000000608 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:35.580 -07 000000608 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:35.590 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 01:47:35.590 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 01:47:35.590 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:35.590 -07 000000608 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 01:47:35.590 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:35.590 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 01:47:35.730 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:35.730 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:35.730 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:35.730 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:35.730 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:47:35.730 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:35.730 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:35.730 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:35.730 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:35.730 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:47:35.920 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:35.920 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:35.920 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28721 150' command took 2 ms to send, 1305 ms to get response, and 1313 ms overall
17-03-18 01:47:35.920 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.131030
17-03-18 01:47:35.920 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13103 mm
17-03-18 01:47:35.920 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:35.920 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 01:47:35.920 -07 000000467 INF: Y Motor: Moving to 68.2126 mm, started at 67.3721 mm, delta = 0.8405 mm
17-03-18 01:47:35.920 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:35.920 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 28623, sync = True, waitForSettling = False)
17-03-18 01:47:35.920 -07 000000502 INF: Z Motor: Moving to -0.131028 mm, started at -0.130686 mm, distance = -0.34 um
17-03-18 01:47:35.930 -07 000000502 INF: FPGA: Xmit ZDACW 28623\n [Z Motor]
17-03-18 01:47:35.930 -07 000000462 INF: FPGA: Recv YRDPOS 137978
17-03-18 01:47:35.930 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 01:47:35.930 -07 000000467 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:35.930 -07 000000467 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:35.930 -07 000000467 INF: Y Motor: Moving 1345 steps-23
17-03-18 01:47:35.930 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:47:35.940 -07 000000502 INF: FPGA: 'ZDACW 28623' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:35.940 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:35.940 -07 000000608 INF: FPGA: Recv ZDACR 28623
17-03-18 01:47:35.950 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:35.950 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:35.950 -07 000000502 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 01:47:36.110 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 01:47:36.110 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 01:47:36.110 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:36.110 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 01:47:36.110 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 01:47:36.110 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:36.110 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:36.120 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:36.120 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 01:47:36.120 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 01:47:36.320 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 01:47:36.320 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 01:47:36.370 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:36.370 -07 000000447 INF: FPGA: Recv YRDPOS 139684
17-03-18 01:47:36.380 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:36.380 -07 000000467 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:36.380 -07 000000467 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 01:47:36.380 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.841 mm, average velocity = 2.123 mm/sec
17-03-18 01:47:37.290 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:37.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:37.330 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:37.330 -07 000000487 INF: FPGA: Recv YRDPOS 139685
17-03-18 01:47:37.340 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.340 -07 000000467 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:37.360 -07 000000467 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:37.360 -07 000000467 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:47:37.360 -07 000000467 INF: Y Motor: Moved to 68.2056 after 1439 ms (table move)
17-03-18 01:47:37.370 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131028 mm (DAC = 28623)
17-03-18 01:47:37.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.380 -07 000000592 INF: FPGA: Recv ZSGSRD 29690
17-03-18 01:47:37.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:47:37.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.410 -07 000000455 INF: FPGA: Recv ZSGSRD 29684
17-03-18 01:47:37.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:47:37.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.440 -07 000000611 INF: FPGA: Recv ZSGSRD 29685
17-03-18 01:47:37.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:47:37.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.450 -07 000000487 INF: FPGA: Recv ZSGSRD 29690
17-03-18 01:47:37.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.460 -07 000000447 INF: FPGA: Recv ZSGSRD 29689
17-03-18 01:47:37.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.470 -07 000000437 INF: FPGA: Recv ZSGSRD 29691
17-03-18 01:47:37.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.480 -07 000000480 INF: FPGA: Recv ZSGSRD 29695
17-03-18 01:47:37.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.490 -07 000000462 INF: FPGA: Recv ZSGSRD 29686
17-03-18 01:47:37.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.500 -07 000000480 INF: FPGA: Recv ZSGSRD 29683
17-03-18 01:47:37.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.510 -07 000000591 INF: FPGA: Recv ZSGSRD 29684
17-03-18 01:47:37.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.520 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:37.520 -07 000000480 INF: FPGA: Recv ZPIEZORD 25253
17-03-18 01:47:37.530 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.368 V. Piezo Error = -9.7 V.
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29688 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29688 (-130.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29683 (-130.2 uncal um), Max = 29695 (-130.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29688, posNoise = 7, negNoise = 5
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: After move to -0.131028, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 159 ms (allowed 150 ms), total time = 1600 ms
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 159 ms, longer than max expected time of 150 ms
17-03-18 01:47:37.530 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms
17-03-18 01:47:37.530 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:37.530 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.131045362075734. ----------
17-03-18 01:47:37.530 -07 000000610 INF: Cycle	91	Tile	11	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28447, sync = True, waitForSettling = True)
17-03-18 01:47:37.530 -07 000000610 INF: Z Motor: Moving to -0.130222 mm, started at -0.131045 mm, distance = 0.82 um
17-03-18 01:47:37.530 -07 000000610 INF: FPGA: Xmit ZDACW 28447\n [Z Motor]
17-03-18 01:47:37.530 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:47:37.540 -07 000000610 INF: FPGA: 'ZDACW 28447' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:37.540 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:37.540 -07 000000611 INF: FPGA: Recv ZDACR 28447
17-03-18 01:47:37.550 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.550 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:37.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.700 -07 000000447 INF: FPGA: Recv ZSGSRD 29562
17-03-18 01:47:37.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:37.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.710 -07 000000462 INF: FPGA: Recv ZSGSRD 29566
17-03-18 01:47:37.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.720 -07 000000611 INF: FPGA: Recv ZSGSRD 29562
17-03-18 01:47:37.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.730 -07 000000447 INF: FPGA: Recv ZSGSRD 29557
17-03-18 01:47:37.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.740 -07 000000611 INF: FPGA: Recv ZSGSRD 29554
17-03-18 01:47:37.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.750 -07 000000437 INF: FPGA: Recv ZSGSRD 29558
17-03-18 01:47:37.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.760 -07 000000467 INF: FPGA: Recv ZSGSRD 29563
17-03-18 01:47:37.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.770 -07 000000579 INF: FPGA: Recv ZSGSRD 29561
17-03-18 01:47:37.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.780 -07 000000611 INF: FPGA: Recv ZSGSRD 29563
17-03-18 01:47:37.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:37.790 -07 000000579 INF: FPGA: Recv ZSGSRD 29564
17-03-18 01:47:37.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.800 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:37.800 -07 000000591 INF: FPGA: Recv ZPIEZORD 25084
17-03-18 01:47:37.810 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:37.810 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.341 V. Piezo Error = -9.8 V.
17-03-18 01:47:37.810 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29561 (-129.5 uncal um), Error = 0.8 uncal um, Median = 29562 (-129.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29554 (-129.4 uncal um), Max = 29566 (-129.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:47:37.810 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29561, posNoise = 5, negNoise = 7
17-03-18 01:47:37.810 -07 000000610 INF: Z Motor: After move to -0.130222, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:37.810 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 01:47:37.810 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:37.810 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:37.810 -07 000000502 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:37.810 -07 000000608 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:37.810 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:37.810 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:37.810 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:37.810 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:37.810 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:37.810 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:37.810 -07 000000611 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:37.810 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:37.820 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:47:37.820 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:37.820 -07 000000611 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 01:47:37.820 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:37.830 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:47:37.830 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:37.830 -07 000000611 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:47:37.830 -07 000000611 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:37.840 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28623 150\n [Camera]
17-03-18 01:47:38.040 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:38.210 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.012614,
17-03-18 01:47:38.430 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:38.430 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:38.430 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:38.430 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:38.430 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 01:47:38.430 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:38.430 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:38.430 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:38.430 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:38.430 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:47:38.620 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28623 776
17-03-18 01:47:38.770 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:38.810 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:47:38.810 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 01:47:38.810 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:47:38.810 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:38.810 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 01:47:38.810 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:38.810 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:47:38.810 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 01:47:38.810 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:47:38.820 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 01:47:38.960 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:38.960 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:38.960 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:39.070 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:39.070 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:47:39.070 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:39.070 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:39.070 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:39.070 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:39.070 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:47:39.150 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:39.150 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:39.150 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28623 150' command took 2 ms to send, 1304 ms to get response, and 1313 ms overall
17-03-18 01:47:39.150 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 01:47:39.150 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 12 at Y-position 68.20556640625, Z-Position -0.130229487133731. ------
17-03-18 01:47:39.150 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:39.150 -07 000000592 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13684 mm
17-03-18 01:47:39.150 -07 000000592 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:39.160 -07 000000487 INF: Z Motor: Entering MoveAbsStepped (DAC = 29893, sync = True, waitForSettling = False)
17-03-18 01:47:39.160 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 01:47:39.160 -07 000000487 INF: Z Motor: Moving to -0.136841 mm, started at -0.130229 mm, distance = -6.61 um
17-03-18 01:47:39.160 -07 000000608 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 01:47:39.160 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:39.160 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-18 01:47:39.160 -07 000000487 INF: FPGA: Xmit ZDACW 29893\n [Z Motor]
17-03-18 01:47:39.160 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 01:47:39.170 -07 000000487 INF: FPGA: 'ZDACW 29893' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:47:39.170 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:39.170 -07 000000611 INF: FPGA: Recv YRDPOS 139685
17-03-18 01:47:39.180 -07 000000467 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:47:39.180 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 01:47:39.180 -07 000000608 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:39.180 -07 000000608 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:39.180 -07 000000608 INF: Y Motor: Moving 1339 steps-15
17-03-18 01:47:39.190 -07 000000487 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:39.190 -07 000000462 INF: FPGA: Recv ZDACR 29893
17-03-18 01:47:39.200 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:39.200 -07 000000487 INF: FPGA: 'ZDACR' command took 2 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:47:39.200 -07 000000487 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet))
17-03-18 01:47:39.380 -07 000000480 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:47:39.380 -07 000000467 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 218 ms overall
17-03-18 01:47:39.450 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 01:47:39.450 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 01:47:39.450 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:39.450 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 01:47:39.450 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 01:47:39.450 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:39.450 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:39.460 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:39.460 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 498 ms.
17-03-18 01:47:39.460 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 01:47:39.570 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 01:47:39.570 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:47:39.620 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:39.620 -07 000000455 INF: FPGA: Recv YRDPOS 141368
17-03-18 01:47:39.630 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:39.630 -07 000000608 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:39.630 -07 000000608 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 01:47:39.630 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.837 mm, average velocity = 2.108 mm/sec
17-03-18 01:47:40.580 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:40.580 -07 000000591 INF: FPGA: Recv YRDPOS 141368
17-03-18 01:47:40.590 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:40.590 -07 000000608 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:40.610 -07 000000608 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:40.610 -07 000000608 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:40.610 -07 000000608 INF: Y Motor: Moved to 69.0273 after 1454 ms (table move)
17-03-18 01:47:40.620 -07 000000592 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136841 mm (DAC = 29893)
17-03-18 01:47:40.620 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.620 -07 000000579 INF: FPGA: Recv ZSGSRD 30590
17-03-18 01:47:40.630 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:40.630 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.630 -07 000000579 INF: FPGA: Recv ZSGSRD 30592
17-03-18 01:47:40.640 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.640 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.640 -07 000000611 INF: FPGA: Recv ZSGSRD 30599
17-03-18 01:47:40.650 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.650 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.650 -07 000000502 INF: FPGA: Recv ZSGSRD 30595
17-03-18 01:47:40.660 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.660 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.660 -07 000000579 INF: FPGA: Recv ZSGSRD 30590
17-03-18 01:47:40.670 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.670 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.670 -07 000000579 INF: FPGA: Recv ZSGSRD 30592
17-03-18 01:47:40.680 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.680 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.680 -07 000000579 INF: FPGA: Recv ZSGSRD 30594
17-03-18 01:47:40.690 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.690 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.690 -07 000000579 INF: FPGA: Recv ZSGSRD 30588
17-03-18 01:47:40.700 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.700 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.700 -07 000000579 INF: FPGA: Recv ZSGSRD 30595
17-03-18 01:47:40.710 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.710 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:40.710 -07 000000579 INF: FPGA: Recv ZSGSRD 30596
17-03-18 01:47:40.720 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.720 -07 000000592 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:40.720 -07 000000579 INF: FPGA: Recv ZPIEZORD 26435
17-03-18 01:47:40.730 -07 000000592 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:40.730 -07 000000592 INF: Z Motor: Piezo is near 36.5 V (nominally 0 to 100 V), expect near 45.6 V, since DAC is at 4.561 V. Piezo Error = -9.1 V.
17-03-18 01:47:40.730 -07 000000592 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.8 um, Read 10 ADC samples: Avg = 30593 (-136.1 uncal um), Error = 0.8 uncal um, Median = 30593 (-136.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 30588 (-136.0 uncal um), Max = 30599 (-136.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:40.730 -07 000000592 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30593, posNoise = 6, negNoise = 5
17-03-18 01:47:40.730 -07 000000592 INF: Z Motor: After move to -0.136841, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:40.730 -07 000000592 INF: Z Motor: Settle wait time = 1459 ms, measure time = 109 ms (allowed 150 ms), total time = 1568 ms
17-03-18 01:47:40.730 -07 000000592 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:40.780 -07 000000592 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 01:47:40.780 -07 000000592 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:40.780 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:40.780 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:40.780 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:40.780 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:47:40.780 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:40.780 -07 000000608 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:40.780 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:40.780 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:47:40.790 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:40.790 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:47:40.800 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms.
17-03-18 01:47:40.800 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms.
17-03-18 01:47:40.800 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:47:40.850 -07 000000592 INF: FPGA: Recv @CAMSNAP turning led on 41
17-03-18 01:47:41.150 -07 000000447 INF: FPGA: Recv @CAMSNAP img rdy 341
17-03-18 01:47:41.150 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 341
17-03-18 01:47:41.150 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:47:41.150 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-18 01:47:41.180 -07 000000480 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:47:41.190 -07 000000592 INF: FPGA: Recv CAMSNAP
17-03-18 01:47:41.190 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 01:47:41.270 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 01:47:41.270 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:41.280 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 01:47:41.280 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 01:47:41.290 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:41.290 -07 000000447 INF: Autofocus start
17-03-18 01:47:41.290 -07 000000447 INF: MeasureProfile start
17-03-18 01:47:41.300 -07 000000467 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:41.300 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:41.300 -07 000000480 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:47:41.310 -07 000000447 INF: MeasureProfile done
17-03-18 01:47:41.310 -07 000000447 INF: X=32  Z correction [um]=0.1299841
17-03-18 01:47:41.310 -07 000000447 INF: Autofocus finished
17-03-18 01:47:41.500 -07 000000467 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:47:41.500 -07 000000480 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 01:47:41.500 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.136859274064028. ----------
17-03-18 01:47:41.500 -07 000000610 INF: Cycle	91	Tile	12	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:41.510 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28434, sync = True, waitForSettling = True)
17-03-18 01:47:41.510 -07 000000610 INF: Z Motor: Moving to -0.130163 mm, started at -0.136859 mm, distance = 6.70 um
17-03-18 01:47:41.510 -07 000000610 INF: FPGA: Xmit ZDACW 28434\n [Z Motor]
17-03-18 01:47:41.510 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 01:47:41.520 -07 000000610 INF: FPGA: 'ZDACW 28434' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:41.520 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:41.520 -07 000000608 INF: FPGA: Recv ZDACR 28434
17-03-18 01:47:41.530 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.530 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:41.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.680 -07 000000502 INF: FPGA: Recv ZSGSRD 29553
17-03-18 01:47:41.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:41.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.690 -07 000000467 INF: FPGA: Recv ZSGSRD 29556
17-03-18 01:47:41.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.700 -07 000000487 INF: FPGA: Recv ZSGSRD 29548
17-03-18 01:47:41.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.710 -07 000000455 INF: FPGA: Recv ZSGSRD 29551
17-03-18 01:47:41.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.720 -07 000000467 INF: FPGA: Recv ZSGSRD 29551
17-03-18 01:47:41.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.730 -07 000000579 INF: FPGA: Recv ZSGSRD 29549
17-03-18 01:47:41.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.740 -07 000000455 INF: FPGA: Recv ZSGSRD 29552
17-03-18 01:47:41.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.750 -07 000000487 INF: FPGA: Recv ZSGSRD 29553
17-03-18 01:47:41.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.760 -07 000000462 INF: FPGA: Recv ZSGSRD 29549
17-03-18 01:47:41.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:41.770 -07 000000592 INF: FPGA: Recv ZSGSRD 29548
17-03-18 01:47:41.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.780 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:41.780 -07 000000579 INF: FPGA: Recv ZPIEZORD 25095
17-03-18 01:47:41.790 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:41.790 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.339 V. Piezo Error = -9.8 V.
17-03-18 01:47:41.790 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29551 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29551 (-129.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29548 (-129.4 uncal um), Max = 29556 (-129.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 01:47:41.790 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29551, posNoise = 5, negNoise = 3
17-03-18 01:47:41.790 -07 000000610 INF: Z Motor: After move to -0.130163, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:41.790 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 01:47:41.790 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:41.790 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:41.790 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:41.790 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:41.790 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:41.790 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:41.790 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:41.790 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:41.790 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:47:41.790 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:41.790 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:41.790 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:41.800 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:41.800 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:41.800 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:47:41.800 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:41.810 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 01:47:41.810 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:41.810 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 01:47:41.810 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 01:47:41.810 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28611 150\n [Camera]
17-03-18 01:47:42.010 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:42.290 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:42.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:42.400 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:42.400 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:42.400 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:42.410 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:42.410 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 01:47:42.410 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:42.410 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:42.410 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:42.410 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:42.410 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:47:42.600 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28611 776
17-03-18 01:47:42.750 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927
17-03-18 01:47:42.780 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 01:47:42.780 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 01:47:42.780 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:42.790 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 01:47:42.790 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 01:47:42.790 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:42.790 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:42.790 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:47:42.790 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:42.800 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 01:47:42.930 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:42.930 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:42.940 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:42.940 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:42.940 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 01:47:42.940 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:42.940 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:42.940 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:42.940 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:42.940 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 01:47:43.130 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:43.130 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:43.130 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28611 150' command took 2 ms to send, 1311 ms to get response, and 1317 ms overall
17-03-18 01:47:43.130 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130612
17-03-18 01:47:43.130 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13061 mm
17-03-18 01:47:43.130 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:43.130 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 01:47:43.130 -07 000000611 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 01:47:43.130 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 28532, sync = True, waitForSettling = False)
17-03-18 01:47:43.130 -07 000000462 INF: Z Motor: Moving to -0.130611 mm, started at -0.130165 mm, distance = -0.45 um
17-03-18 01:47:43.130 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:43.250 -07 000000447 INF: FPGA: Recv YRDPOS 141369
17-03-18 01:47:43.260 -07 000000462 INF: FPGA: Xmit ZDACW 28532\n [Z Motor]
17-03-18 01:47:43.260 -07 000000611 INF: FPGA: 'YRDPOS' command took 114 ms to send, 0 ms to get response, and 123 ms overall
17-03-18 01:47:43.260 -07 000000611 INF: Y Motor: Encoder = 141369 = motor step 110444.5 = 69.0278 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:43.260 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 01:47:43.260 -07 000000611 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:43.260 -07 000000611 INF: Y Motor: Moving 1352 steps-31
17-03-18 01:47:43.270 -07 000000462 INF: FPGA: 'ZDACW 28532' command took 0 ms to send, 0 ms to get response, and 133 ms overall
17-03-18 01:47:43.280 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:43.290 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:43.290 -07 000000502 INF: FPGA: Recv ZDACR 28532
17-03-18 01:47:43.300 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:47:43.300 -07 000000462 INF: Z Motor: MoveAbsStepped took 163 ms (did NOT wait for settling yet))
17-03-18 01:47:43.330 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 01:47:43.330 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 01:47:43.330 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:43.330 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:43.330 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 01:47:43.330 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 01:47:43.330 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:43.340 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 01:47:43.340 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 01:47:43.340 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 01:47:43.590 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.023489,
17-03-18 01:47:43.650 -07 000000447 INF: FPGA: Recv YMVTILE
17-03-18 01:47:43.650 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall
17-03-18 01:47:43.700 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:43.700 -07 000000437 INF: FPGA: Recv YRDPOS 143080
17-03-18 01:47:43.710 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:43.710 -07 000000611 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:43.710 -07 000000611 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 01:47:43.710 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.845 mm, average velocity = 2.145 mm/sec
17-03-18 01:47:44.660 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:44.660 -07 000000608 INF: FPGA: Recv YRDPOS 143080
17-03-18 01:47:44.670 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.670 -07 000000611 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:44.690 -07 000000611 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:44.690 -07 000000611 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:44.690 -07 000000611 INF: Y Motor: Moved to 69.8633 after 1561 ms (table move)
17-03-18 01:47:44.700 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130611 mm (DAC = 28532)
17-03-18 01:47:44.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.700 -07 000000437 INF: FPGA: Recv ZSGSRD 29617
17-03-18 01:47:44.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.710 -07 000000461 INF: FPGA: Recv ZSGSRD 29628
17-03-18 01:47:44.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.720 -07 000000447 INF: FPGA: Recv ZSGSRD 29617
17-03-18 01:47:44.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.730 -07 000000611 INF: FPGA: Recv ZSGSRD 29622
17-03-18 01:47:44.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.740 -07 000000480 INF: FPGA: Recv ZSGSRD 29620
17-03-18 01:47:44.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.750 -07 000000455 INF: FPGA: Recv ZSGSRD 29619
17-03-18 01:47:44.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.760 -07 000000461 INF: FPGA: Recv ZSGSRD 29618
17-03-18 01:47:44.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.770 -07 000000592 INF: FPGA: Recv ZSGSRD 29619
17-03-18 01:47:44.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.780 -07 000000487 INF: FPGA: Recv ZSGSRD 29620
17-03-18 01:47:44.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:44.790 -07 000000437 INF: FPGA: Recv ZSGSRD 29623
17-03-18 01:47:44.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.800 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:44.800 -07 000000591 INF: FPGA: Recv ZPIEZORD 25203
17-03-18 01:47:44.810 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.810 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -9.7 V.
17-03-18 01:47:44.810 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29620 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29620 (-129.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29617 (-129.8 uncal um), Max = 29628 (-129.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 01:47:44.810 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29620, posNoise = 8, negNoise = 3
17-03-18 01:47:44.810 -07 000000610 INF: Z Motor: After move to -0.130611, error = 0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:44.810 -07 000000610 INF: Z Motor: Settle wait time = 1564 ms, measure time = 110 ms (allowed 150 ms), total time = 1674 ms
17-03-18 01:47:44.810 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:44.850 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1716 ms
17-03-18 01:47:44.850 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:44.850 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.130608515650095. ----------
17-03-18 01:47:44.850 -07 000000610 INF: Cycle	91	Tile	13	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:44.850 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28355, sync = True, waitForSettling = True)
17-03-18 01:47:44.850 -07 000000610 INF: Z Motor: Moving to -0.129801 mm, started at -0.130609 mm, distance = 0.81 um
17-03-18 01:47:44.850 -07 000000610 INF: FPGA: Xmit ZDACW 28355\n [Z Motor]
17-03-18 01:47:44.850 -07 000000611 INF: FPGA: Recv ZDACW
17-03-18 01:47:44.860 -07 000000610 INF: FPGA: 'ZDACW 28355' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:44.860 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:44.860 -07 000000579 INF: FPGA: Recv ZDACR 28355
17-03-18 01:47:44.870 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:44.870 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:45.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.020 -07 000000592 INF: FPGA: Recv ZSGSRD 29491
17-03-18 01:47:45.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:45.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.030 -07 000000487 INF: FPGA: Recv ZSGSRD 29492
17-03-18 01:47:45.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.040 -07 000000591 INF: FPGA: Recv ZSGSRD 29497
17-03-18 01:47:45.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.050 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.050 -07 000000480 INF: FPGA: Recv ZSGSRD 29492
17-03-18 01:47:45.060 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.060 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.060 -07 000000608 INF: FPGA: Recv ZSGSRD 29489
17-03-18 01:47:45.070 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.070 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.070 -07 000000592 INF: FPGA: Recv ZSGSRD 29495
17-03-18 01:47:45.080 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.080 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.080 -07 000000591 INF: FPGA: Recv ZSGSRD 29490
17-03-18 01:47:45.090 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.090 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.090 -07 000000480 INF: FPGA: Recv ZSGSRD 29494
17-03-18 01:47:45.100 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.100 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.100 -07 000000608 INF: FPGA: Recv ZSGSRD 29496
17-03-18 01:47:45.110 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.110 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:45.110 -07 000000579 INF: FPGA: Recv ZSGSRD 29493
17-03-18 01:47:45.120 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.120 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:45.120 -07 000000591 INF: FPGA: Recv ZPIEZORD 25018
17-03-18 01:47:45.130 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:45.130 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.327 V. Piezo Error = -9.8 V.
17-03-18 01:47:45.130 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.8 um, Read 10 ADC samples: Avg = 29493 (-129.0 uncal um), Error = 0.8 uncal um, Median = 29492 (-129.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29489 (-129.0 uncal um), Max = 29497 (-129.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:47:45.130 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29493, posNoise = 4, negNoise = 4
17-03-18 01:47:45.130 -07 000000610 INF: Z Motor: After move to -0.129801, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:45.130 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:47:45.130 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:45.130 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:45.130 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:45.130 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:45.130 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:45.130 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:45.130 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:45.130 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:45.130 -07 000000608 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 01:47:45.130 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:45.130 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 3 ms.
17-03-18 01:47:45.130 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:45.140 -07 000000608 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:45.140 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:45.140 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:45.140 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:45.150 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 01:47:45.150 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 01:47:45.150 -07 000000608 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 01:47:45.150 -07 000000608 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 01:47:45.150 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28532 150\n [Camera]
17-03-18 01:47:45.350 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:45.740 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:45.740 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:45.740 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:45.740 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:45.740 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:45.740 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:45.740 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:45.750 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:47:45.750 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:45.750 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 01:47:45.930 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28532 776
17-03-18 01:47:46.080 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:46.140 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 01:47:46.140 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 01:47:46.140 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:46.140 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:46.140 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 01:47:46.150 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 01:47:46.150 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 01:47:46.150 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:46.150 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:46.160 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 01:47:46.270 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:46.270 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:46.270 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:46.270 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:46.270 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:47:46.270 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:46.270 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:46.270 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:46.270 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:46.270 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:47:46.460 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:46.460 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:46.460 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28532 150' command took 2 ms to send, 1307 ms to get response, and 1313 ms overall
17-03-18 01:47:46.460 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129696
17-03-18 01:47:46.460 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12970 mm
17-03-18 01:47:46.460 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:46.470 -07 000000467 INF: Z Motor: Entering MoveAbsStepped (DAC = 28332, sync = True, waitForSettling = False)
17-03-18 01:47:46.470 -07 000000467 INF: Z Motor: Moving to -0.129696 mm, started at -0.129793 mm, distance = 0.10 um
17-03-18 01:47:46.470 -07 000000467 INF: FPGA: Xmit ZDACW 28332\n [Z Motor]
17-03-18 01:47:46.470 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 01:47:46.470 -07 000000579 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 01:47:46.470 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:47:46.480 -07 000000467 INF: FPGA: 'ZDACW 28332' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:47:46.480 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:46.480 -07 000000502 INF: FPGA: Recv YRDPOS 143080
17-03-18 01:47:46.490 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 01:47:46.490 -07 000000467 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:46.490 -07 000000579 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:46.490 -07 000000579 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:46.490 -07 000000579 INF: Y Motor: Moving 1343 steps-19
17-03-18 01:47:46.490 -07 000000447 INF: FPGA: Recv ZDACR 28332
17-03-18 01:47:46.500 -07 000000467 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:47:46.500 -07 000000467 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 01:47:46.500 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:46.670 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 01:47:46.670 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:47:46.670 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:46.680 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 01:47:46.680 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 01:47:46.680 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:46.680 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:47:46.680 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms.
17-03-18 01:47:46.680 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:47:46.690 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 01:47:46.870 -07 000000611 INF: FPGA: Recv YMVTILE
17-03-18 01:47:46.870 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 01:47:46.920 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:46.920 -07 000000447 INF: FPGA: Recv YRDPOS 144770
17-03-18 01:47:46.930 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:47:46.930 -07 000000579 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:46.930 -07 000000579 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 01:47:46.930 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.163 mm/sec
17-03-18 01:47:47.290 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:47.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:47.880 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:47.880 -07 000000487 INF: FPGA: Recv YRDPOS 144770
17-03-18 01:47:47.890 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:47.890 -07 000000579 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:47.910 -07 000000579 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:47.910 -07 000000579 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:47.910 -07 000000579 INF: Y Motor: Moved to 70.6885 after 1444 ms (table move)
17-03-18 01:47:47.910 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129696 mm (DAC = 28332)
17-03-18 01:47:47.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.920 -07 000000608 INF: FPGA: Recv ZSGSRD 29478
17-03-18 01:47:47.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:47.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.930 -07 000000579 INF: FPGA: Recv ZSGSRD 29476
17-03-18 01:47:47.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:47.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.940 -07 000000608 INF: FPGA: Recv ZSGSRD 29481
17-03-18 01:47:47.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:47.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.950 -07 000000502 INF: FPGA: Recv ZSGSRD 29482
17-03-18 01:47:47.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:47.960 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.960 -07 000000608 INF: FPGA: Recv ZSGSRD 29473
17-03-18 01:47:47.970 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:47.970 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.970 -07 000000502 INF: FPGA: Recv ZSGSRD 29478
17-03-18 01:47:47.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:47.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.980 -07 000000467 INF: FPGA: Recv ZSGSRD 29477
17-03-18 01:47:47.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:47.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:47.990 -07 000000455 INF: FPGA: Recv ZSGSRD 29481
17-03-18 01:47:48.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.000 -07 000000447 INF: FPGA: Recv ZSGSRD 29478
17-03-18 01:47:48.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.010 -07 000000455 INF: FPGA: Recv ZSGSRD 29479
17-03-18 01:47:48.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.020 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:48.020 -07 000000447 INF: FPGA: Recv ZPIEZORD 25000
17-03-18 01:47:48.030 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.030 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.323 V. Piezo Error = -9.8 V.
17-03-18 01:47:48.030 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29478 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29478 (-128.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29473 (-128.9 uncal um), Max = 29482 (-128.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:48.030 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29478, posNoise = 4, negNoise = 5
17-03-18 01:47:48.030 -07 000000610 INF: Z Motor: After move to -0.129696, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:48.030 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 111 ms (allowed 150 ms), total time = 1558 ms
17-03-18 01:47:48.030 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:48.070 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 01:47:48.070 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:48.070 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.129696277525964. ----------
17-03-18 01:47:48.070 -07 000000610 INF: Cycle	91	Tile	14	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:48.070 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28155, sync = True, waitForSettling = True)
17-03-18 01:47:48.070 -07 000000610 INF: Z Motor: Moving to -0.128885 mm, started at -0.129696 mm, distance = 0.81 um
17-03-18 01:47:48.070 -07 000000610 INF: FPGA: Xmit ZDACW 28155\n [Z Motor]
17-03-18 01:47:48.070 -07 000000480 INF: FPGA: Recv ZDACW
17-03-18 01:47:48.080 -07 000000610 INF: FPGA: 'ZDACW 28155' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:48.080 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:48.080 -07 000000608 INF: FPGA: Recv ZDACR 28155
17-03-18 01:47:48.090 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.090 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:48.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.240 -07 000000437 INF: FPGA: Recv ZSGSRD 29354
17-03-18 01:47:48.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:48.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.250 -07 000000591 INF: FPGA: Recv ZSGSRD 29353
17-03-18 01:47:48.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.260 -07 000000437 INF: FPGA: Recv ZSGSRD 29361
17-03-18 01:47:48.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.270 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.270 -07 000000462 INF: FPGA: Recv ZSGSRD 29358
17-03-18 01:47:48.280 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.280 -07 000000447 INF: FPGA: Recv ZSGSRD 29354
17-03-18 01:47:48.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.290 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.290 -07 000000591 INF: FPGA: Recv ZSGSRD 29350
17-03-18 01:47:48.300 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.300 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.300 -07 000000447 INF: FPGA: Recv ZSGSRD 29355
17-03-18 01:47:48.310 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.310 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.310 -07 000000591 INF: FPGA: Recv ZSGSRD 29353
17-03-18 01:47:48.320 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.320 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.320 -07 000000447 INF: FPGA: Recv ZSGSRD 29346
17-03-18 01:47:48.330 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:48.330 -07 000000579 INF: FPGA: Recv ZSGSRD 29356
17-03-18 01:47:48.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.340 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:48.340 -07 000000502 INF: FPGA: Recv ZPIEZORD 24833
17-03-18 01:47:48.350 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:48.350 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.296 V. Piezo Error = -9.9 V.
17-03-18 01:47:48.350 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29354 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29354 (-128.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29346 (-128.1 uncal um), Max = 29361 (-128.2 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:47:48.350 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29354, posNoise = 7, negNoise = 8
17-03-18 01:47:48.350 -07 000000610 INF: Z Motor: After move to -0.128885, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:48.350 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 01:47:48.350 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:48.350 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:48.350 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:48.350 -07 000000455 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:48.350 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:48.350 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:48.350 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:48.350 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:48.350 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:48.350 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:48.350 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:48.350 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:48.360 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:48.360 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:48.360 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:47:48.360 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:48.370 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 01:47:48.370 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:48.370 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 01:47:48.370 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:47:48.380 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28332 150\n [Camera]
17-03-18 01:47:48.570 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:48.950 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.007176,
17-03-18 01:47:48.970 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:48.970 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:48.970 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:48.970 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:48.970 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 01:47:48.970 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:48.970 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:48.970 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:48.970 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:48.970 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 01:47:49.160 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28332 776
17-03-18 01:47:49.310 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:49.340 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 369 ms.
17-03-18 01:47:49.340 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 369 ms.
17-03-18 01:47:49.340 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:49.340 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:49.340 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 01:47:49.340 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 01:47:49.340 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:49.350 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:49.350 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 01:47:49.350 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 01:47:49.500 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:49.500 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:49.500 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:49.500 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:49.500 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 01:47:49.500 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:49.500 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:49.500 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:49.500 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:49.500 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 01:47:49.690 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:49.690 -07 000000480 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:49.690 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28332 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall
17-03-18 01:47:49.690 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129591
17-03-18 01:47:49.690 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12959 mm
17-03-18 01:47:49.690 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:49.700 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 01:47:49.700 -07 000000487 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 01:47:49.700 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:49.700 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 28309, sync = True, waitForSettling = False)
17-03-18 01:47:49.700 -07 000000480 INF: Z Motor: Moving to -0.129590 mm, started at -0.128900 mm, distance = -0.69 um
17-03-18 01:47:49.700 -07 000000608 INF: FPGA: Recv YRDPOS 144770
17-03-18 01:47:49.710 -07 000000480 INF: FPGA: Xmit ZDACW 28309\n [Z Motor]
17-03-18 01:47:49.710 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:49.710 -07 000000487 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:49.710 -07 000000487 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:49.710 -07 000000487 INF: Y Motor: Moving 1351 steps-29
17-03-18 01:47:49.710 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 01:47:49.720 -07 000000480 INF: FPGA: 'ZDACW 28309' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 01:47:49.720 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:49.730 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:49.730 -07 000000447 INF: FPGA: Recv ZDACR 28309
17-03-18 01:47:49.740 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:47:49.740 -07 000000480 INF: Z Motor: MoveAbsStepped took 37 ms (did NOT wait for settling yet))
17-03-18 01:47:49.880 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 01:47:49.880 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:47:49.880 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:49.880 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 01:47:49.880 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 01:47:49.880 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:49.880 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:49.880 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 01:47:49.890 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:47:49.890 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 01:47:50.090 -07 000000461 INF: FPGA: Recv YMVTILE
17-03-18 01:47:50.100 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 388 ms overall
17-03-18 01:47:50.140 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:50.140 -07 000000591 INF: FPGA: Recv YRDPOS 146470
17-03-18 01:47:50.150 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:50.150 -07 000000487 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:50.150 -07 000000487 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 01:47:50.150 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.844 mm, average velocity = 2.170 mm/sec
17-03-18 01:47:51.100 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:51.100 -07 000000467 INF: FPGA: Recv YRDPOS 146471
17-03-18 01:47:51.110 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:51.110 -07 000000487 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:51.130 -07 000000487 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:51.130 -07 000000487 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:47:51.130 -07 000000487 INF: Y Motor: Moved to 71.5190 after 1436 ms (table move)
17-03-18 01:47:51.140 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129590 mm (DAC = 28309)
17-03-18 01:47:51.140 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.140 -07 000000591 INF: FPGA: Recv ZSGSRD 29467
17-03-18 01:47:51.150 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.150 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.150 -07 000000487 INF: FPGA: Recv ZSGSRD 29461
17-03-18 01:47:51.160 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.160 -07 000000462 INF: FPGA: Recv ZSGSRD 29462
17-03-18 01:47:51.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.170 -07 000000591 INF: FPGA: Recv ZSGSRD 29460
17-03-18 01:47:51.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.180 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.180 -07 000000480 INF: FPGA: Recv ZSGSRD 29452
17-03-18 01:47:51.190 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.190 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.190 -07 000000467 INF: FPGA: Recv ZSGSRD 29459
17-03-18 01:47:51.200 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.200 -07 000000480 INF: FPGA: Recv ZSGSRD 29457
17-03-18 01:47:51.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.210 -07 000000591 INF: FPGA: Recv ZSGSRD 29469
17-03-18 01:47:51.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.220 -07 000000467 INF: FPGA: Recv ZSGSRD 29456
17-03-18 01:47:51.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.230 -07 000000462 INF: FPGA: Recv ZSGSRD 29461
17-03-18 01:47:51.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.240 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:51.240 -07 000000591 INF: FPGA: Recv ZPIEZORD 25060
17-03-18 01:47:51.250 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.250 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.320 V. Piezo Error = -9.7 V.
17-03-18 01:47:51.250 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.6 um, Read 10 ADC samples: Avg = 29460 (-128.8 uncal um), Error = 0.8 uncal um, Median = 29460 (-128.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29452 (-128.8 uncal um), Max = 29469 (-128.9 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:47:51.250 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29460, posNoise = 9, negNoise = 8
17-03-18 01:47:51.250 -07 000000610 INF: Z Motor: After move to -0.129590, error = 0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:51.250 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 110 ms (allowed 150 ms), total time = 1548 ms
17-03-18 01:47:51.250 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:51.290 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-18 01:47:51.290 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:51.290 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.129580641707413. ----------
17-03-18 01:47:51.290 -07 000000610 INF: Cycle	91	Tile	15	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:51.290 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28132, sync = True, waitForSettling = True)
17-03-18 01:47:51.290 -07 000000610 INF: Z Motor: Moving to -0.128780 mm, started at -0.129581 mm, distance = 0.80 um
17-03-18 01:47:51.290 -07 000000610 INF: FPGA: Xmit ZDACW 28132\n [Z Motor]
17-03-18 01:47:51.290 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 01:47:51.300 -07 000000610 INF: FPGA: 'ZDACW 28132' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:47:51.300 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:51.300 -07 000000502 INF: FPGA: Recv ZDACR 28132
17-03-18 01:47:51.310 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.310 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:51.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.460 -07 000000591 INF: FPGA: Recv ZSGSRD 29336
17-03-18 01:47:51.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:51.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.470 -07 000000608 INF: FPGA: Recv ZSGSRD 29342
17-03-18 01:47:51.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.480 -07 000000467 INF: FPGA: Recv ZSGSRD 29339
17-03-18 01:47:51.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.490 -07 000000502 INF: FPGA: Recv ZSGSRD 29336
17-03-18 01:47:51.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.500 -07 000000467 INF: FPGA: Recv ZSGSRD 29338
17-03-18 01:47:51.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.510 -07 000000608 INF: FPGA: Recv ZSGSRD 29335
17-03-18 01:47:51.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.520 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.520 -07 000000467 INF: FPGA: Recv ZSGSRD 29332
17-03-18 01:47:51.530 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.530 -07 000000608 INF: FPGA: Recv ZSGSRD 29334
17-03-18 01:47:51.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.540 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.540 -07 000000591 INF: FPGA: Recv ZSGSRD 29339
17-03-18 01:47:51.550 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:51.550 -07 000000455 INF: FPGA: Recv ZSGSRD 29339
17-03-18 01:47:51.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.560 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:51.560 -07 000000608 INF: FPGA: Recv ZPIEZORD 24864
17-03-18 01:47:51.570 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:51.570 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.293 V. Piezo Error = -9.8 V.
17-03-18 01:47:51.570 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29337 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29337 (-128.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29332 (-128.0 uncal um), Max = 29342 (-128.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:47:51.570 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29337, posNoise = 5, negNoise = 5
17-03-18 01:47:51.570 -07 000000610 INF: Z Motor: After move to -0.128780, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:51.570 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:47:51.570 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:51.570 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:51.570 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:51.570 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:51.570 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:51.570 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:51.570 -07 000000437 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 3 ms.
17-03-18 01:47:51.570 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:51.570 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:51.570 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:51.580 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:51.580 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:51.580 -07 000000437 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:51.580 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:51.580 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 01:47:51.580 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:51.590 -07 000000437 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:47:51.590 -07 000000437 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 01:47:51.590 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 01:47:51.590 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 01:47:51.590 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28309 150\n [Camera]
17-03-18 01:47:51.790 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:52.190 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:52.190 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:52.190 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:52.190 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:52.190 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 01:47:52.190 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:52.190 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:52.190 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:52.190 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:52.190 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start.
17-03-18 01:47:52.290 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:52.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:52.380 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28309 776
17-03-18 01:47:52.530 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:52.560 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 01:47:52.560 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 01:47:52.560 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:52.560 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:52.570 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 01:47:52.570 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 01:47:52.570 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:52.570 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:52.570 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 01:47:52.700 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 514 ms.
17-03-18 01:47:52.720 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:52.720 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:52.720 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:52.720 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:52.720 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:47:52.720 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:52.720 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:52.720 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:52.720 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:52.720 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 01:47:52.910 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:47:52.910 -07 000000592 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:52.910 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28309 150' command took 2 ms to send, 1303 ms to get response, and 1313 ms overall
17-03-18 01:47:52.910 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 01:47:52.910 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.51904296875, Z-Position -0.128790463613976. ------
17-03-18 01:47:52.910 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:52.920 -07 000000447 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13515 mm
17-03-18 01:47:52.920 -07 000000447 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:52.920 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 29523, sync = True, waitForSettling = False)
17-03-18 01:47:52.920 -07 000000579 INF: Z Motor: Moving to -0.135148 mm, started at -0.128790 mm, distance = -6.36 um
17-03-18 01:47:52.920 -07 000000579 INF: FPGA: Xmit ZDACW 29523\n [Z Motor]
17-03-18 01:47:52.920 -07 000000487 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:52.920 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 5 ms to get response, and 6 ms overall
17-03-18 01:47:52.920 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 01:47:52.920 -07 000000480 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 01:47:52.920 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 01:47:52.930 -07 000000579 INF: FPGA: 'ZDACW 29523' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:52.930 -07 000000467 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 01:47:52.940 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:52.940 -07 000000437 INF: FPGA: Recv YRDPOS 146471
17-03-18 01:47:52.950 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 01:47:52.950 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:52.950 -07 000000480 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:52.950 -07 000000480 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:52.950 -07 000000480 INF: Y Motor: Moving 1350 steps-29
17-03-18 01:47:52.950 -07 000000592 INF: FPGA: Recv ZDACR 29523
17-03-18 01:47:52.960 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:47:52.960 -07 000000579 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 01:47:52.960 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:53.110 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 390 ms.
17-03-18 01:47:53.110 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:47:53.110 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:53.110 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 01:47:53.110 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 01:47:53.110 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:53.110 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:53.120 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 01:47:53.120 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:53.120 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 01:47:53.130 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 01:47:53.130 -07 000000467 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 206 ms overall
17-03-18 01:47:53.330 -07 000000437 INF: FPGA: Recv YMVTILE
17-03-18 01:47:53.330 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall
17-03-18 01:47:53.380 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:53.380 -07 000000502 INF: FPGA: Recv YRDPOS 148172
17-03-18 01:47:53.390 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 01:47:53.390 -07 000000480 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:53.390 -07 000000480 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 01:47:53.390 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.844 mm, average velocity = 2.180 mm/sec
17-03-18 01:47:54.310 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 4.005817,
17-03-18 01:47:54.340 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:54.340 -07 000000462 INF: FPGA: Recv YRDPOS 148172
17-03-18 01:47:54.350 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.350 -07 000000480 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:54.370 -07 000000480 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:54.370 -07 000000480 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:47:54.370 -07 000000480 INF: Y Motor: Moved to 72.3496 after 1451 ms (table move)
17-03-18 01:47:54.380 -07 000000447 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135148 mm (DAC = 29523)
17-03-18 01:47:54.380 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.380 -07 000000592 INF: FPGA: Recv ZSGSRD 30329
17-03-18 01:47:54.390 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.390 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.390 -07 000000480 INF: FPGA: Recv ZSGSRD 30321
17-03-18 01:47:54.400 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.400 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.400 -07 000000437 INF: FPGA: Recv ZSGSRD 30329
17-03-18 01:47:54.410 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.410 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.410 -07 000000455 INF: FPGA: Recv ZSGSRD 30333
17-03-18 01:47:54.420 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.420 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.420 -07 000000592 INF: FPGA: Recv ZSGSRD 30327
17-03-18 01:47:54.430 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.430 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.430 -07 000000487 INF: FPGA: Recv ZSGSRD 30329
17-03-18 01:47:54.440 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.440 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.440 -07 000000455 INF: FPGA: Recv ZSGSRD 30326
17-03-18 01:47:54.450 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.450 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.450 -07 000000437 INF: FPGA: Recv ZSGSRD 30328
17-03-18 01:47:54.460 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.460 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.460 -07 000000502 INF: FPGA: Recv ZSGSRD 30327
17-03-18 01:47:54.470 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.470 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:54.470 -07 000000487 INF: FPGA: Recv ZSGSRD 30324
17-03-18 01:47:54.480 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.480 -07 000000447 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:54.480 -07 000000592 INF: FPGA: Recv ZPIEZORD 26208
17-03-18 01:47:54.490 -07 000000447 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:54.490 -07 000000447 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.505 V. Piezo Error = -9.1 V.
17-03-18 01:47:54.490 -07 000000447 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.1 um, Read 10 ADC samples: Avg = 30327 (-134.4 uncal um), Error = 0.8 uncal um, Median = 30328 (-134.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30321 (-134.3 uncal um), Max = 30333 (-134.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 01:47:54.490 -07 000000447 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30327, posNoise = 6, negNoise = 6
17-03-18 01:47:54.490 -07 000000447 INF: Z Motor: After move to -0.135148, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:54.490 -07 000000447 INF: Z Motor: Settle wait time = 1455 ms, measure time = 110 ms (allowed 150 ms), total time = 1565 ms
17-03-18 01:47:54.490 -07 000000447 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:54.530 -07 000000447 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1610 ms
17-03-18 01:47:54.530 -07 000000447 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:54.530 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:54.530 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:54.530 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:54.530 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:54.530 -07 000000487 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 01:47:54.530 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:54.530 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:54.530 -07 000000487 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 01:47:54.540 -07 000000487 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 01:47:54.540 -07 000000487 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 01:47:54.550 -07 000000487 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 01:47:54.550 -07 000000487 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 01:47:54.550 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 01:47:54.600 -07 000000480 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 01:47:54.900 -07 000000480 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 01:47:54.900 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 01:47:54.900 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 01:47:54.900 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) start.
17-03-18 01:47:54.940 -07 000000579 INF: FPGA: Recv @CAMSNAP 380
17-03-18 01:47:54.940 -07 000000608 INF: FPGA: Recv CAMSNAP
17-03-18 01:47:54.940 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 01:47:55.010 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) end. Duration was 116 ms.
17-03-18 01:47:55.010 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:55.020 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 01:47:55.020 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 01:47:55.040 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 01:47:55.040 -07 000000447 INF: Autofocus start
17-03-18 01:47:55.040 -07 000000447 INF: MeasureProfile start
17-03-18 01:47:55.040 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 01:47:55.050 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:55.050 -07 000000462 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 01:47:55.050 -07 000000447 INF: MeasureProfile done
17-03-18 01:47:55.050 -07 000000447 INF: X=-32  Z correction [um]=-0.1591732
17-03-18 01:47:55.050 -07 000000447 INF: Autofocus finished
17-03-18 01:47:55.250 -07 000000592 INF: FPGA: Recv FOCMRRIMG
17-03-18 01:47:55.250 -07 000000462 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 203 ms overall
17-03-18 01:47:55.250 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.13515043363432. ----------
17-03-18 01:47:55.250 -07 000000610 INF: Cycle	91	Tile	16	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:55.260 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28001, sync = True, waitForSettling = True)
17-03-18 01:47:55.260 -07 000000610 INF: Z Motor: Moving to -0.128180 mm, started at -0.135150 mm, distance = 6.97 um
17-03-18 01:47:55.260 -07 000000610 INF: FPGA: Xmit ZDACW 28001\n [Z Motor]
17-03-18 01:47:55.260 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 01:47:55.270 -07 000000610 INF: FPGA: 'ZDACW 28001' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.270 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:55.270 -07 000000437 INF: FPGA: Recv ZDACR 28001
17-03-18 01:47:55.280 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.280 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:55.430 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.430 -07 000000455 INF: FPGA: Recv ZSGSRD 29245
17-03-18 01:47:55.440 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:55.440 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.440 -07 000000455 INF: FPGA: Recv ZSGSRD 29242
17-03-18 01:47:55.450 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.450 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.450 -07 000000437 INF: FPGA: Recv ZSGSRD 29241
17-03-18 01:47:55.460 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.460 -07 000000437 INF: FPGA: Recv ZSGSRD 29247
17-03-18 01:47:55.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.470 -07 000000480 INF: FPGA: Recv ZSGSRD 29244
17-03-18 01:47:55.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.480 -07 000000437 INF: FPGA: Recv ZSGSRD 29243
17-03-18 01:47:55.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.490 -07 000000480 INF: FPGA: Recv ZSGSRD 29246
17-03-18 01:47:55.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.500 -07 000000455 INF: FPGA: Recv ZSGSRD 29239
17-03-18 01:47:55.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.510 -07 000000480 INF: FPGA: Recv ZSGSRD 29246
17-03-18 01:47:55.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.520 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:55.520 -07 000000480 INF: FPGA: Recv ZSGSRD 29241
17-03-18 01:47:55.530 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.530 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:55.530 -07 000000447 INF: FPGA: Recv ZPIEZORD 24765
17-03-18 01:47:55.540 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:55.540 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.273 V. Piezo Error = -9.8 V.
17-03-18 01:47:55.540 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.2 um, Read 10 ADC samples: Avg = 29243 (-127.4 uncal um), Error = 0.8 uncal um, Median = 29244 (-127.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29239 (-127.4 uncal um), Max = 29247 (-127.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:47:55.540 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29243, posNoise = 4, negNoise = 4
17-03-18 01:47:55.540 -07 000000610 INF: Z Motor: After move to -0.128180, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:55.540 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 01:47:55.540 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:55.540 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:55.540 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:55.540 -07 000000437 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:55.540 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:55.540 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:55.540 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:55.540 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:55.540 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 01:47:55.540 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:55.540 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:55.540 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:55.550 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:47:55.550 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:55.550 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:55.550 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:55.550 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 01:47:55.550 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 01:47:55.550 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 01:47:55.560 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 01:47:55.560 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28177 150\n [Camera]
17-03-18 01:47:55.760 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:56.150 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584
17-03-18 01:47:56.150 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584
17-03-18 01:47:56.150 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:56.150 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:56.150 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1132378384, 0x0, 391868352) start.
17-03-18 01:47:56.150 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584
17-03-18 01:47:56.150 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584
17-03-18 01:47:56.150 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:56.150 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:56.150 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1167800648, 0x0, 418435064) start.
17-03-18 01:47:56.340 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28177 776
17-03-18 01:47:56.490 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:56.550 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1132378384, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 01:47:56.550 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 01:47:56.550 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:56.550 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1167800648, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 01:47:56.550 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:47:56.560 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:56.560 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:56.560 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 01:47:56.560 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:56.570 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 01:47:56.680 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:56.680 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:56.680 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:56.800 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:56.800 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:56.800 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:56.800 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:56.800 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 01:47:56.810 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:56.810 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 01:47:56.870 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:47:56.870 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:47:56.870 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28177 150' command took 2 ms to send, 1308 ms to get response, and 1313 ms overall
17-03-18 01:47:56.880 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.128756
17-03-18 01:47:56.880 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.12876 mm
17-03-18 01:47:56.880 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:47:56.880 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 01:47:56.880 -07 000000608 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 01:47:56.880 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:56.880 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 28127, sync = True, waitForSettling = False)
17-03-18 01:47:56.880 -07 000000480 INF: Z Motor: Moving to -0.128757 mm, started at -0.128187 mm, distance = -0.57 um
17-03-18 01:47:56.880 -07 000000437 INF: FPGA: Recv YRDPOS 148172
17-03-18 01:47:56.890 -07 000000480 INF: FPGA: Xmit ZDACW 28127\n [Z Motor]
17-03-18 01:47:56.890 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:47:56.890 -07 000000608 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:56.890 -07 000000608 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:47:56.890 -07 000000608 INF: Y Motor: Moving 1349 steps-27
17-03-18 01:47:56.890 -07 000000437 INF: FPGA: Recv ZDACW
17-03-18 01:47:56.900 -07 000000480 INF: FPGA: 'ZDACW 28127' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 01:47:56.900 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:56.900 -07 000000592 INF: FPGA: Recv ZDACR 28127
17-03-18 01:47:56.910 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:47:56.910 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:56.910 -07 000000480 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 01:47:57.200 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 399 ms.
17-03-18 01:47:57.200 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 01:47:57.200 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:57.200 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 01:47:57.200 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 01:47:57.200 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:57.210 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:47:57.210 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 01:47:57.210 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 525 ms.
17-03-18 01:47:57.210 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms.
17-03-18 01:47:57.280 -07 000000592 INF: FPGA: Recv YMVTILE
17-03-18 01:47:57.280 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 01:47:57.290 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:47:57.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:47:57.330 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:57.330 -07 000000447 INF: FPGA: Recv YRDPOS 149864
17-03-18 01:47:57.340 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:47:57.340 -07 000000608 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:57.340 -07 000000608 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm)
17-03-18 01:47:57.340 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.843 mm, average velocity = 2.123 mm/sec
17-03-18 01:47:58.290 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:47:58.290 -07 000000455 INF: FPGA: Recv YRDPOS 149865
17-03-18 01:47:58.300 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:58.300 -07 000000608 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:47:58.320 -07 000000608 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:47:58.320 -07 000000608 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:47:58.320 -07 000000608 INF: Y Motor: Moved to 73.1763 after 1443 ms (table move)
17-03-18 01:47:58.320 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128757 mm (DAC = 28127)
17-03-18 01:47:58.320 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.330 -07 000000502 INF: FPGA: Recv ZSGSRD 29332
17-03-18 01:47:58.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:58.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.340 -07 000000608 INF: FPGA: Recv ZSGSRD 29329
17-03-18 01:47:58.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.350 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.350 -07 000000502 INF: FPGA: Recv ZSGSRD 29328
17-03-18 01:47:58.360 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.360 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.360 -07 000000608 INF: FPGA: Recv ZSGSRD 29336
17-03-18 01:47:58.370 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.370 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.370 -07 000000608 INF: FPGA: Recv ZSGSRD 29338
17-03-18 01:47:58.380 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.380 -07 000000502 INF: FPGA: Recv ZSGSRD 29338
17-03-18 01:47:58.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.390 -07 000000502 INF: FPGA: Recv ZSGSRD 29331
17-03-18 01:47:58.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.400 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.400 -07 000000502 INF: FPGA: Recv ZSGSRD 29331
17-03-18 01:47:58.410 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.410 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.410 -07 000000502 INF: FPGA: Recv ZSGSRD 29323
17-03-18 01:47:58.420 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.420 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.420 -07 000000502 INF: FPGA: Recv ZSGSRD 29333
17-03-18 01:47:58.430 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.430 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:58.430 -07 000000502 INF: FPGA: Recv ZPIEZORD 24895
17-03-18 01:47:58.440 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.440 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.292 V. Piezo Error = -9.7 V.
17-03-18 01:47:58.440 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.8 um, Read 10 ADC samples: Avg = 29332 (-128.0 uncal um), Error = 0.8 uncal um, Median = 29332 (-128.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29323 (-127.9 uncal um), Max = 29338 (-128.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 01:47:58.440 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29332, posNoise = 6, negNoise = 9
17-03-18 01:47:58.440 -07 000000610 INF: Z Motor: After move to -0.128757, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:58.440 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 112 ms (allowed 150 ms), total time = 1557 ms
17-03-18 01:47:58.440 -07 000000610 INF: Z Motor: Waiting extra 38 ms after reading position to reach expected total of 150 ms
17-03-18 01:47:58.480 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-18 01:47:58.480 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:47:58.480 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.128758342553267. ----------
17-03-18 01:47:58.480 -07 000000610 INF: Cycle	91	Tile	17	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:47:58.480 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27950, sync = True, waitForSettling = True)
17-03-18 01:47:58.480 -07 000000610 INF: Z Motor: Moving to -0.127947 mm, started at -0.128758 mm, distance = 0.81 um
17-03-18 01:47:58.480 -07 000000610 INF: FPGA: Xmit ZDACW 27950\n [Z Motor]
17-03-18 01:47:58.480 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 01:47:58.490 -07 000000610 INF: FPGA: 'ZDACW 27950' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:47:58.490 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:47:58.490 -07 000000462 INF: FPGA: Recv ZDACR 27950
17-03-18 01:47:58.500 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.500 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:47:58.650 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.650 -07 000000592 INF: FPGA: Recv ZSGSRD 29210
17-03-18 01:47:58.660 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:47:58.660 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.660 -07 000000480 INF: FPGA: Recv ZSGSRD 29210
17-03-18 01:47:58.670 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.670 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.670 -07 000000592 INF: FPGA: Recv ZSGSRD 29204
17-03-18 01:47:58.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.680 -07 000000480 INF: FPGA: Recv ZSGSRD 29211
17-03-18 01:47:58.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.690 -07 000000592 INF: FPGA: Recv ZSGSRD 29207
17-03-18 01:47:58.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.700 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.700 -07 000000480 INF: FPGA: Recv ZSGSRD 29211
17-03-18 01:47:58.710 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.710 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.710 -07 000000480 INF: FPGA: Recv ZSGSRD 29205
17-03-18 01:47:58.720 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.720 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.720 -07 000000592 INF: FPGA: Recv ZSGSRD 29201
17-03-18 01:47:58.730 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.730 -07 000000480 INF: FPGA: Recv ZSGSRD 29212
17-03-18 01:47:58.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:47:58.740 -07 000000592 INF: FPGA: Recv ZSGSRD 29206
17-03-18 01:47:58.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.750 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:47:58.750 -07 000000592 INF: FPGA: Recv ZPIEZORD 24718
17-03-18 01:47:58.760 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:47:58.760 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.265 V. Piezo Error = -9.8 V.
17-03-18 01:47:58.760 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29208 (-127.2 uncal um), Error = 0.8 uncal um, Median = 29208 (-127.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29201 (-127.1 uncal um), Max = 29212 (-127.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:47:58.760 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29208, posNoise = 4, negNoise = 7
17-03-18 01:47:58.760 -07 000000610 INF: Z Motor: After move to -0.127947, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:47:58.760 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 01:47:58.760 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:47:58.760 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:47:58.760 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:47:58.760 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:47:58.760 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:47:58.760 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:47:58.760 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:47:58.760 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:47:58.760 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:47:58.760 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:47:58.760 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:47:58.760 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:47:58.770 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:47:58.770 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:47:58.770 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:47:58.770 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:47:58.780 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-18 01:47:58.780 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 01:47:58.780 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 01:47:58.780 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 01:47:58.780 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28127 150\n [Camera]
17-03-18 01:47:58.980 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:47:59.370 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:47:59.370 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:47:59.370 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:59.370 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:59.370 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1127973080, 0x0, 391868352) start.
17-03-18 01:47:59.370 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:47:59.370 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:47:59.380 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:47:59.380 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:47:59.380 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1163395344, 0x0, 418435064) start.
17-03-18 01:47:59.560 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28127 776
17-03-18 01:47:59.680 -07 000000608 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.99219,
17-03-18 01:47:59.710 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:47:59.750 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1127973080, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 01:47:59.750 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 01:47:59.750 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:59.750 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1163395344, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 01:47:59.750 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 01:47:59.750 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:47:59.760 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:47:59.760 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 01:47:59.760 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:47:59.760 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 01:47:59.900 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:47:59.900 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:47:59.900 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:47:59.900 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:47:59.900 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 01:47:59.910 -07 000000608 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:47:59.910 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:47:59.910 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:48:00.030 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:48:00.030 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 01:48:00.090 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:48:00.090 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:48:00.090 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28127 150' command took 2 ms to send, 1309 ms to get response, and 1313 ms overall
17-03-18 01:48:00.100 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128286
17-03-18 01:48:00.100 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12829 mm
17-03-18 01:48:00.100 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:48:00.100 -07 000000608 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 01:48:00.100 -07 000000608 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 01:48:00.100 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:48:00.100 -07 000000437 INF: Z Motor: Entering MoveAbsStepped (DAC = 28024, sync = True, waitForSettling = False)
17-03-18 01:48:00.100 -07 000000437 INF: Z Motor: Moving to -0.128286 mm, started at -0.127962 mm, distance = -0.32 um
17-03-18 01:48:00.100 -07 000000487 INF: FPGA: Recv YRDPOS 149865
17-03-18 01:48:00.110 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 01:48:00.110 -07 000000608 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:48:00.110 -07 000000608 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:48:00.110 -07 000000608 INF: Y Motor: Moving 1354 steps-34
17-03-18 01:48:00.110 -07 000000437 INF: FPGA: Xmit ZDACW 28024\n [Z Motor]
17-03-18 01:48:00.110 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 01:48:00.120 -07 000000437 INF: FPGA: 'ZDACW 28024' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 01:48:00.120 -07 000000437 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:48:00.120 -07 000000447 INF: FPGA: Recv ZDACR 28024
17-03-18 01:48:00.130 -07 000000437 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:00.130 -07 000000437 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 01:48:00.130 -07 000000608 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:48:00.310 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 01:48:00.310 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 01:48:00.310 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:00.310 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:48:00.310 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 01:48:00.430 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 397 ms.
17-03-18 01:48:00.430 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 01:48:00.430 -07 000000480 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:00.430 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 01:48:00.440 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 529 ms.
17-03-18 01:48:00.500 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 01:48:00.500 -07 000000608 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 398 ms overall
17-03-18 01:48:00.540 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:48:00.540 -07 000000437 INF: FPGA: Recv YRDPOS 151569
17-03-18 01:48:00.550 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:48:00.550 -07 000000608 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:48:00.550 -07 000000608 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 01:48:00.550 -07 000000608 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.846 mm, average velocity = 2.126 mm/sec
17-03-18 01:48:01.500 -07 000000608 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:48:01.500 -07 000000592 INF: FPGA: Recv YRDPOS 151569
17-03-18 01:48:01.510 -07 000000608 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:48:01.510 -07 000000608 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:48:01.530 -07 000000608 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:48:01.530 -07 000000608 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 01:48:01.530 -07 000000608 INF: Y Motor: Moved to 74.0083 after 1426 ms (table move)
17-03-18 01:48:01.530 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128286 mm (DAC = 28024)
17-03-18 01:48:01.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.530 -07 000000480 INF: FPGA: Recv ZSGSRD 29263
17-03-18 01:48:01.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 01:48:01.540 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.540 -07 000000608 INF: FPGA: Recv ZSGSRD 29259
17-03-18 01:48:01.550 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.550 -07 000000579 INF: FPGA: Recv ZSGSRD 29252
17-03-18 01:48:01.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.560 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.560 -07 000000447 INF: FPGA: Recv ZSGSRD 29265
17-03-18 01:48:01.570 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.570 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.570 -07 000000592 INF: FPGA: Recv ZSGSRD 29263
17-03-18 01:48:01.580 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.580 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.580 -07 000000502 INF: FPGA: Recv ZSGSRD 29252
17-03-18 01:48:01.590 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.590 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.590 -07 000000579 INF: FPGA: Recv ZSGSRD 29260
17-03-18 01:48:01.600 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.600 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.600 -07 000000487 INF: FPGA: Recv ZSGSRD 29258
17-03-18 01:48:01.610 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.610 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.610 -07 000000579 INF: FPGA: Recv ZSGSRD 29258
17-03-18 01:48:01.620 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.620 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.620 -07 000000480 INF: FPGA: Recv ZSGSRD 29260
17-03-18 01:48:01.630 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.630 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:48:01.630 -07 000000592 INF: FPGA: Recv ZPIEZORD 24878
17-03-18 01:48:01.640 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.640 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.276 V. Piezo Error = -9.6 V.
17-03-18 01:48:01.640 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29259 (-127.5 uncal um), Error = 0.8 uncal um, Median = 29260 (-127.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29252 (-127.5 uncal um), Max = 29265 (-127.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 01:48:01.640 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29259, posNoise = 6, negNoise = 7
17-03-18 01:48:01.640 -07 000000610 INF: Z Motor: After move to -0.128286, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:48:01.640 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 106 ms (allowed 150 ms), total time = 1535 ms
17-03-18 01:48:01.640 -07 000000610 INF: Z Motor: Waiting extra 44 ms after reading position to reach expected total of 150 ms
17-03-18 01:48:01.690 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms
17-03-18 01:48:01.690 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:48:01.690 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128289375066919. ----------
17-03-18 01:48:01.690 -07 000000610 INF: Cycle	91	Tile	18	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:48:01.690 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27847, sync = True, waitForSettling = True)
17-03-18 01:48:01.690 -07 000000610 INF: Z Motor: Moving to -0.127475 mm, started at -0.128289 mm, distance = 0.81 um
17-03-18 01:48:01.690 -07 000000610 INF: FPGA: Xmit ZDACW 27847\n [Z Motor]
17-03-18 01:48:01.690 -07 000000487 INF: FPGA: Recv ZDACW
17-03-18 01:48:01.700 -07 000000610 INF: FPGA: 'ZDACW 27847' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:48:01.700 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:48:01.700 -07 000000592 INF: FPGA: Recv ZDACR 27847
17-03-18 01:48:01.710 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:48:01.710 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:48:01.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.860 -07 000000480 INF: FPGA: Recv ZSGSRD 29133
17-03-18 01:48:01.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:48:01.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.870 -07 000000502 INF: FPGA: Recv ZSGSRD 29133
17-03-18 01:48:01.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.880 -07 000000592 INF: FPGA: Recv ZSGSRD 29139
17-03-18 01:48:01.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.890 -07 000000502 INF: FPGA: Recv ZSGSRD 29135
17-03-18 01:48:01.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.900 -07 000000480 INF: FPGA: Recv ZSGSRD 29133
17-03-18 01:48:01.910 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.910 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.910 -07 000000579 INF: FPGA: Recv ZSGSRD 29129
17-03-18 01:48:01.920 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.920 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.920 -07 000000437 INF: FPGA: Recv ZSGSRD 29132
17-03-18 01:48:01.930 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.930 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.930 -07 000000480 INF: FPGA: Recv ZSGSRD 29133
17-03-18 01:48:01.940 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.940 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.940 -07 000000592 INF: FPGA: Recv ZSGSRD 29130
17-03-18 01:48:01.950 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.950 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:01.950 -07 000000487 INF: FPGA: Recv ZSGSRD 29130
17-03-18 01:48:01.960 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.960 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:48:01.960 -07 000000592 INF: FPGA: Recv ZPIEZORD 24661
17-03-18 01:48:01.970 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:01.970 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.249 V. Piezo Error = -9.8 V.
17-03-18 01:48:01.970 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29133 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29133 (-126.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29129 (-126.7 uncal um), Max = 29139 (-126.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 01:48:01.970 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29133, posNoise = 6, negNoise = 4
17-03-18 01:48:01.970 -07 000000610 INF: Z Motor: After move to -0.127475, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:48:01.970 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 01:48:01.970 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:48:01.970 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:48:01.970 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:48:01.970 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:48:01.970 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:48:01.970 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:48:01.970 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:48:01.970 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:48:01.970 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:48:01.970 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:48:01.970 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:48:01.970 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:48:01.980 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 01:48:01.980 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:48:01.980 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 01:48:01.980 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:48:01.990 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 01:48:01.990 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:48:01.990 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 01:48:01.990 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 01:48:02.000 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 28024 150\n [Camera]
17-03-18 01:48:02.200 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:48:02.290 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 01:48:02.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 90. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval.
17-03-18 01:48:02.590 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:48:02.590 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:48:02.590 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:48:02.590 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:48:02.590 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 01:48:02.590 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:48:02.590 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:48:02.590 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:48:02.590 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:48:02.590 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 01:48:02.780 -07 000000611 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28024 776
17-03-18 01:48:02.930 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:48:02.990 -07 000000437 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 01:48:02.990 -07 000000437 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 01:48:02.990 -07 000000437 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:02.990 -07 000000437 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 01:48:02.990 -07 000000437 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 01:48:02.990 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 01:48:02.990 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 01:48:02.990 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:03.000 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:48:03.000 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 01:48:03.120 -07 000000437 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:48:03.120 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:48:03.120 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:48:03.120 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:48:03.120 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 01:48:03.120 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:48:03.120 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:48:03.120 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:48:03.120 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:48:03.120 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) start.
17-03-18 01:48:03.310 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1306
17-03-18 01:48:03.310 -07 000000437 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:48:03.310 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 28024 150' command took 2 ms to send, 1304 ms to get response, and 1313 ms overall
17-03-18 01:48:03.310 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127430
17-03-18 01:48:03.310 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12743 mm
17-03-18 01:48:03.310 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 01:48:03.310 -07 000000611 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 01:48:03.310 -07 000000611 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 01:48:03.310 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:48:03.310 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 27837, sync = True, waitForSettling = False)
17-03-18 01:48:03.310 -07 000000480 INF: Z Motor: Moving to -0.127430 mm, started at -0.127480 mm, distance = 0.05 um
17-03-18 01:48:03.320 -07 000000480 INF: FPGA: Xmit ZDACW 27837\n [Z Motor]
17-03-18 01:48:03.320 -07 000000462 INF: FPGA: Recv YRDPOS 151569
17-03-18 01:48:03.320 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 01:48:03.320 -07 000000611 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:48:03.320 -07 000000611 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 01:48:03.320 -07 000000611 INF: Y Motor: Moving 1351 steps-29
17-03-18 01:48:03.320 -07 000000592 INF: FPGA: Recv ZDACW
17-03-18 01:48:03.330 -07 000000480 INF: FPGA: 'ZDACW 27837' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:48:03.330 -07 000000611 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 01:48:03.340 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:48:03.340 -07 000000592 INF: FPGA: Recv ZDACR 27837
17-03-18 01:48:03.350 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:48:03.350 -07 000000480 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 01:48:03.500 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 01:48:03.500 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:48:03.500 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1113297000, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 01:48:03.500 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 01:48:03.500 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:03.500 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:03.510 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:48:03.510 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:48:03.510 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 01:48:03.510 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 01:48:03.700 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 01:48:03.700 -07 000000611 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 01:48:03.730 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:48:03.730 -07 000000462 INF: FPGA: Recv YRDPOS 153255
17-03-18 01:48:03.740 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 01:48:03.740 -07 000000611 INF: Y Motor: Encoder = 153255 = motor step 119730.5 = 74.8315 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:48:03.740 -07 000000611 INF: Y Motor: Position error before settling (table move) = -43 encoder counts (-0.021 mm)
17-03-18 01:48:03.740 -07 000000611 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.844 mm, average velocity = 2.187 mm/sec
17-03-18 01:48:04.690 -07 000000611 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 01:48:04.690 -07 000000591 INF: FPGA: Recv YRDPOS 153256
17-03-18 01:48:04.700 -07 000000611 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 01:48:04.700 -07 000000611 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 01:48:04.710 -07 000000611 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 01:48:04.710 -07 000000611 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 01:48:04.710 -07 000000611 INF: Y Motor: Moved to 74.8320 after 1399 ms (table move)
17-03-18 01:48:04.720 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127430 mm (DAC = 27837)
17-03-18 01:48:04.730 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.730 -07 000000579 INF: FPGA: Recv ZSGSRD 29122
17-03-18 01:48:04.740 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 01:48:04.740 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.740 -07 000000579 INF: FPGA: Recv ZSGSRD 29121
17-03-18 01:48:04.750 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.750 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.750 -07 000000579 INF: FPGA: Recv ZSGSRD 29127
17-03-18 01:48:04.760 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.760 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.760 -07 000000579 INF: FPGA: Recv ZSGSRD 29123
17-03-18 01:48:04.770 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.770 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.770 -07 000000447 INF: FPGA: Recv ZSGSRD 29121
17-03-18 01:48:04.780 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 01:48:04.780 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.780 -07 000000447 INF: FPGA: Recv ZSGSRD 29127
17-03-18 01:48:04.790 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.790 -07 000000447 INF: FPGA: Recv ZSGSRD 29131
17-03-18 01:48:04.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.800 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.800 -07 000000447 INF: FPGA: Recv ZSGSRD 29127
17-03-18 01:48:04.810 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.810 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.810 -07 000000447 INF: FPGA: Recv ZSGSRD 29124
17-03-18 01:48:04.820 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.820 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:04.820 -07 000000502 INF: FPGA: Recv ZSGSRD 29119
17-03-18 01:48:04.830 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.830 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:48:04.830 -07 000000502 INF: FPGA: Recv ZPIEZORD 24698
17-03-18 01:48:04.840 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.840 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.248 V. Piezo Error = -9.7 V.
17-03-18 01:48:04.840 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.4 um, Read 10 ADC samples: Avg = 29124 (-126.6 uncal um), Error = 0.8 uncal um, Median = 29124 (-126.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29119 (-126.6 uncal um), Max = 29131 (-126.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 01:48:04.840 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29124, posNoise = 7, negNoise = 5
17-03-18 01:48:04.840 -07 000000610 INF: Z Motor: After move to -0.127430, error = 0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:48:04.840 -07 000000610 INF: Z Motor: Settle wait time = 1401 ms, measure time = 120 ms (allowed 150 ms), total time = 1521 ms
17-03-18 01:48:04.840 -07 000000610 INF: Z Motor: Waiting extra 30 ms after reading position to reach expected total of 150 ms
17-03-18 01:48:04.870 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1553 ms
17-03-18 01:48:04.870 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 01:48:04.870 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.127422106427781. ----------
17-03-18 01:48:04.870 -07 000000610 INF: Cycle	91	Tile	19	Exposure Settings		A	391	G	188	T	188	C	391
17-03-18 01:48:04.870 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27660, sync = True, waitForSettling = True)
17-03-18 01:48:04.870 -07 000000610 INF: Z Motor: Moving to -0.126619 mm, started at -0.127422 mm, distance = 0.80 um
17-03-18 01:48:04.870 -07 000000610 INF: FPGA: Xmit ZDACW 27660\n [Z Motor]
17-03-18 01:48:04.870 -07 000000447 INF: FPGA: Recv ZDACW
17-03-18 01:48:04.880 -07 000000610 INF: FPGA: 'ZDACW 27660' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 01:48:04.880 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 01:48:04.880 -07 000000437 INF: FPGA: Recv ZDACR 27660
17-03-18 01:48:04.890 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:04.890 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 01:48:05.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.040 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.971733,
17-03-18 01:48:05.040 -07 000000487 INF: FPGA: Recv ZSGSRD 29003
17-03-18 01:48:05.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.070 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.070 -07 000000447 INF: FPGA: Recv ZSGSRD 28994
17-03-18 01:48:05.080 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:48:05.080 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.080 -07 000000447 INF: FPGA: Recv ZSGSRD 29002
17-03-18 01:48:05.090 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.110 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.110 -07 000000591 INF: FPGA: Recv ZSGSRD 29000
17-03-18 01:48:05.120 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 01:48:05.120 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.120 -07 000000480 INF: FPGA: Recv ZSGSRD 29002
17-03-18 01:48:05.130 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.130 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.130 -07 000000480 INF: FPGA: Recv ZSGSRD 28997
17-03-18 01:48:05.140 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.140 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.140 -07 000000462 INF: FPGA: Recv ZSGSRD 28992
17-03-18 01:48:05.150 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.150 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.150 -07 000000480 INF: FPGA: Recv ZSGSRD 28999
17-03-18 01:48:05.160 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.160 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.160 -07 000000480 INF: FPGA: Recv ZSGSRD 29006
17-03-18 01:48:05.170 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.170 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 01:48:05.170 -07 000000462 INF: FPGA: Recv ZSGSRD 29004
17-03-18 01:48:05.180 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.180 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 01:48:05.180 -07 000000579 INF: FPGA: Recv ZPIEZORD 24531
17-03-18 01:48:05.190 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 01:48:05.190 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.221 V. Piezo Error = -9.8 V.
17-03-18 01:48:05.190 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.6 um, Read 10 ADC samples: Avg = 29000 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29001 (-125.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 28992 (-125.8 uncal um), Max = 29006 (-125.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 01:48:05.190 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29000, posNoise = 6, negNoise = 8
17-03-18 01:48:05.190 -07 000000610 INF: Z Motor: After move to -0.126619, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 01:48:05.190 -07 000000610 INF: Z Motor: MoveAbsStepped took 316 ms)
17-03-18 01:48:05.190 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 01:48:05.190 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 01:48:05.190 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 01:48:05.190 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 01:48:05.190 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 01:48:05.190 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 01:48:05.190 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 01:48:05.190 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 01:48:05.190 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 01:48:05.190 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 01:48:05.190 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 01:48:05.190 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 01:48:05.200 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 01:48:05.200 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 01:48:05.200 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 01:48:05.200 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 01:48:05.210 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 01:48:05.210 -07 000000487 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 01:48:05.210 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 01:48:05.210 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 01:48:05.210 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 391 391 188 188 27837 150\n [Camera]
17-03-18 01:48:05.410 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 01:48:05.810 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 583
17-03-18 01:48:05.810 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 583
17-03-18 01:48:05.810 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:48:05.810 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:48:05.810 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) start.
17-03-18 01:48:05.810 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 583
17-03-18 01:48:05.810 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 583
17-03-18 01:48:05.810 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:48:05.810 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:48:05.810 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 01:48:06.000 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27837 776
17-03-18 01:48:06.150 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 926
17-03-18 01:48:06.190 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 1148719264, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 01:48:06.190 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 01:48:06.190 -07 000000487 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:06.190 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 01:48:06.190 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 01:48:06.190 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:06.200 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:48:06.200 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 01:48:06.200 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 01:48:06.200 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 01:48:06.340 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1114
17-03-18 01:48:06.340 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1114
17-03-18 01:48:06.340 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 01:48:06.340 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 01:48:06.340 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 01:48:06.340 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1114
17-03-18 01:48:06.340 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1114
17-03-18 01:48:06.340 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 01:48:06.340 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 01:48:06.340 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 01:48:06.530 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1307
17-03-18 01:48:06.530 -07 000000487 INF: FPGA: Recv CAMDBLSNAP
17-03-18 01:48:06.530 -07 000000610 INF: FPGA: 'CAMDBLSNAP 391 391 188 188 27837 150' command took 2 ms to send, 1302 ms to get response, and 1313 ms overall
17-03-18 01:48:06.720 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 01:48:06.720 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 01:48:06.720 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:06.720 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 01:48:06.720 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 01:48:06.720 -07 000000447 INF: Camera: CopyActivePixFullImage start.
17-03-18 01:48:06.720 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:48:06.720 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 01:48:06.720 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 01:48:06.720 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 01:48:06.730 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 01:48:06.770 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 01:48:06.770 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 01:48:06.810 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 01:48:06.820 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 01:48:06.820 -07 000000610 INF: Imaging Cycle 91: ScanTilesCommand Cycle 91 time end. Duration was 141404 ms.
17-03-18 01:48:06.820 -07 000000610 INF: =================== Cycle #91 ===================
17-03-18 01:48:06.820 -07 000000610 INF: ===================  ===================
17-03-18 01:48:06.820 -07 000000591 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 01:48:06.830 -07 000000487 INF: FPGA: Recv EXLED1ADCR 29
17-03-18 01:48:06.830 -07 000000591 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 01:48:06.830 -07 000000591 INF: GreenLED: Using Green data: Photodiode ADC 29 --> 0.0 mW (old method), or 2.2 mW (new method). Difference = 2.2 mW
17-03-18 01:48:06.830 -07 000000591 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 91, FrontChillerTemperature: 3.971733, FrontChillerHeatSinkTemperature: 0.383749, AmbientTemperature: 18.85544, FlowCellCompartmentTemperature: 21.99981, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.94139, GreenLEDSensorTemperature: 24.79404, PhotodiodePowerAdcGreen: 29, PhotodiodePowerMwGreen: 2.200606
17-03-18 01:48:07.030 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.