17-03-18 01:48:07.080 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:07.080 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True) 17-03-18 01:48:07.080 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm 17-03-18 01:48:07.080 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:48:07.080 -07 000000480 INF: FPGA: Recv YRDPOS 153256 17-03-18 01:48:07.090 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:48:07.090 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:48:07.090 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False 17-03-18 01:48:07.090 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts 17-03-18 01:48:07.090 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor] 17-03-18 01:48:07.200 -07 000000480 INF: FPGA: Recv YMVTO 154378 878 17-03-18 01:48:07.200 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 109 ms to get response, and 118 ms overall 17-03-18 01:48:07.200 -07 000000610 INF: Y Motor: Position error before settling = -1 encoder counts (0.000 mm) 17-03-18 01:48:07.200 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 878 steps (0.549 mm). Slippage = 0.001 mm (0.00%). 17-03-18 01:48:07.200 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 118 ms, distance = 0.549 mm, average velocity = 4.649 mm/sec 17-03-18 01:48:07.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:07.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval. 17-03-18 01:48:10.200 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:48:10.200 -07 000000591 INF: FPGA: Recv YRDPOS 154387 17-03-18 01:48:10.210 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:48:10.210 -07 000000610 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:48:10.230 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.003697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:48:10.230 -07 000000610 INF: Y Motor: Position error after settling = 8 encoder counts (0.004 mm), Delta during settling = 9 counts (0.004 mm) 17-03-18 01:48:10.230 -07 000000610 INF: Y Motor: Moved to 75.3843 after 3149 ms 17-03-18 01:48:10.230 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 60° =================== 17-03-18 01:48:10.240 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 60°, FC temperature to 60° =================== 17-03-18 01:48:10.240 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl] 17-03-18 01:48:10.240 -07 000000447 INF: FPGA: Recv TEC2TEMP 17-03-18 01:48:10.250 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:48:10.250 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 01:48:10.250 -07 000000462 INF: FPGA: Recv TEC2EN 17-03-18 01:48:10.260 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:48:10.260 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 60° =================== 17-03-18 01:48:10.260 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:10.260 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 01:48:10.260 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:10.290 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-18 01:48:10.290 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions. 17-03-18 01:48:10.290 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 01:48:10.430 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.994908, 17-03-18 01:48:10.590 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:48:10.610 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-18 01:48:10.610 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-18 01:48:10.660 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:10.680 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:48:10.680 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:48:10.780 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:10.780 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-18 01:48:10.780 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:10.810 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 01:48:10.810 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 01:48:10.810 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:48:10.940 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-18 01:48:10.980 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:12.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:12.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1410, R2=1466, Total=2876. Warn if over 250 bubbles per interval. 17-03-18 01:48:14.110 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:14.140 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:14.560 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:14.590 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:15.010 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:15.040 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:15.040 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete 17-03-18 01:48:15.040 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:15.170 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:15.200 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 01:48:15.200 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 01:48:15.330 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:15.360 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 01:48:15.360 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 01:48:15.360 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:48:15.490 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:48:15.520 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:15.790 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.999021, 17-03-18 01:48:15.950 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:15.980 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:15.980 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 01:48:15.980 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:17.200 -07 000000610 INF: AsyncDelayTimer waited 1207ms 17-03-18 01:48:17.200 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start 17-03-18 01:48:17.200 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:17.220 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:48:17.220 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions. 17-03-18 01:48:17.220 -07 000000610 INF: ReagentValve: Xmit +04\r 17-03-18 01:48:17.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 9 R1 10 17-03-18 01:48:17.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=10, R2=9, Total=19. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1420, R2=1475, Total=2895. Warn if over 250 bubbles per interval. 17-03-18 01:48:17.350 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:48:17.370 -07 000000610 INF: ReagentValve: Recv 00CD\r 17-03-18 01:48:17.370 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%) 17-03-18 01:48:17.420 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:17.440 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-18 01:48:17.440 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:48:17.540 -07 000000610 INF: =================== Cycle #92, Pumping Reagent CMS (4) =================== 17-03-18 01:48:17.540 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 01:48:17.540 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:17.570 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 01:48:17.570 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 01:48:17.570 -07 000000610 INF: =================== Cycle #92, Pumping Reagent CMS (4), Aspirating port InputPort =================== 17-03-18 01:48:17.700 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 01:48:17.740 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:19.180 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:19.210 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:19.630 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:19.660 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:19.660 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 01:48:19.660 -07 000000610 INF: =================== Cycle #92, Pumping Reagent CMS (4) =================== 17-03-18 01:48:19.790 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:19.820 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 01:48:19.820 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 01:48:19.950 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:19.980 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 01:48:19.980 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 01:48:19.980 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:48:20.110 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:48:20.140 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:20.570 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:20.600 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:20.600 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 01:48:20.600 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:21.150 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.000345, 17-03-18 01:48:21.820 -07 000000610 INF: AsyncDelayTimer waited 1217ms 17-03-18 01:48:21.820 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 01:48:21.820 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:21.840 -07 000000610 INF: ReagentValve: Recv 04\r 17-03-18 01:48:21.840 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions. 17-03-18 01:48:21.840 -07 000000610 INF: ReagentValve: Xmit -03\r 17-03-18 01:48:21.990 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:48:22.010 -07 000000610 INF: ReagentValve: Recv 00E1\r 17-03-18 01:48:22.010 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%) 17-03-18 01:48:22.060 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:22.080 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:48:22.080 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:48:22.180 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:22.180 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 01:48:22.180 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:22.210 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 01:48:22.210 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 01:48:22.210 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:48:22.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0 17-03-18 01:48:22.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1420, R2=1476, Total=2896. Warn if over 250 bubbles per interval. 17-03-18 01:48:22.340 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 01:48:22.380 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:23.250 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:23.280 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:23.280 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-18 01:48:23.280 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:23.410 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:23.440 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 01:48:23.440 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 01:48:23.570 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:23.600 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 01:48:23.600 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 01:48:23.600 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:48:23.730 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:48:23.760 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:24.190 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:24.220 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:24.220 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 01:48:24.220 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:24.220 -07 000000487 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 01:48:24.220 -07 000000462 INF: WaitCommand(10000) start 17-03-18 01:48:24.220 -07 000000487 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 01:48:25.440 -07 000000487 INF: AsyncDelayTimer waited 1214ms 17-03-18 01:48:25.440 -07 000000487 INF: LanePump: Xmit /1?\r 17-03-18 01:48:25.470 -07 000000487 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 01:48:25.470 -07 000000487 INF: LanePump: Current Position of Pump is: 1110 17-03-18 01:48:25.600 -07 000000487 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 01:48:25.640 -07 000000487 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:26.510 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.983999, 17-03-18 01:48:27.170 -07 000000487 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:27.200 -07 000000487 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:27.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:27.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1420, R2=1476, Total=2896. Warn if over 250 bubbles per interval. 17-03-18 01:48:27.620 -07 000000487 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:27.650 -07 000000487 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:27.650 -07 000000487 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-18 01:48:27.650 -07 000000487 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 01:48:27.650 -07 000000487 INF: =================== =================== 17-03-18 01:48:31.870 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.993549, 17-03-18 01:48:32.290 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:32.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1420, R2=1476, Total=2896. Warn if over 250 bubbles per interval. 17-03-18 01:48:34.230 -07 000000462 INF: WaitCommand(10000) end 17-03-18 01:48:34.230 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:34.230 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1 17-03-18 01:48:34.230 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:34.260 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 01:48:34.260 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 01:48:34.260 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:48:34.390 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r 17-03-18 01:48:34.430 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:37.230 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.986717, 17-03-18 01:48:37.290 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:37.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1420, R2=1476, Total=2896. Warn if over 250 bubbles per interval. 17-03-18 01:48:40.560 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:40.590 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:41.010 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:41.040 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:41.460 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:41.490 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:41.910 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:41.940 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:42.290 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1 17-03-18 01:48:42.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:48:42.360 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:42.390 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:42.390 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete 17-03-18 01:48:42.390 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:42.520 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:42.550 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 01:48:42.550 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 01:48:42.590 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.979922, 17-03-18 01:48:42.680 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:42.710 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 01:48:42.710 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 01:48:42.710 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:48:42.840 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:48:42.870 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:43.300 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:43.330 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:43.330 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 01:48:43.330 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:44.550 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-18 01:48:44.550 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start 17-03-18 01:48:44.550 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:44.570 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:48:44.570 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions. 17-03-18 01:48:44.570 -07 000000610 INF: ReagentValve: Xmit -01\r 17-03-18 01:48:44.780 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:48:44.800 -07 000000610 INF: ReagentValve: Recv 0198\r 17-03-18 01:48:44.800 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%) 17-03-18 01:48:44.850 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:44.870 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-18 01:48:44.870 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:48:44.970 -07 000000610 INF: =================== Cycle #92, Pumping Reagent IMT (1) =================== 17-03-18 01:48:44.970 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 01:48:44.970 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:45.000 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n 17-03-18 01:48:45.000 -07 000000610 INF: LanePump: Current Position of Pump is: 1500 17-03-18 01:48:45.000 -07 000000610 INF: =================== Cycle #92, Pumping Reagent IMT (1), Aspirating port InputPort =================== 17-03-18 01:48:45.130 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 01:48:45.170 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:46.610 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:46.640 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:47.060 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:47.090 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:47.090 -07 000000610 INF: LanePump: Waited 1920 ms for pump motion to complete 17-03-18 01:48:47.090 -07 000000610 INF: =================== Cycle #92, Pumping Reagent IMT (1) =================== 17-03-18 01:48:47.220 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:47.250 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 01:48:47.250 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 01:48:47.290 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:47.290 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:48:47.380 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:47.410 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 01:48:47.410 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 01:48:47.410 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:48:47.540 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:48:47.570 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:47.950 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.990831, 17-03-18 01:48:48.000 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:48.030 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:48.030 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 01:48:48.030 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:49.250 -07 000000610 INF: AsyncDelayTimer waited 1219ms 17-03-18 01:48:49.250 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 01:48:49.250 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:49.270 -07 000000610 INF: ReagentValve: Recv 01\r 17-03-18 01:48:49.270 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions. 17-03-18 01:48:49.270 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 01:48:49.500 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:48:49.520 -07 000000610 INF: ReagentValve: Recv 01AC\r 17-03-18 01:48:49.520 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%) 17-03-18 01:48:49.570 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:48:49.590 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:48:49.590 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:48:49.690 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:49.690 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 01:48:49.690 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:49.720 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n 17-03-18 01:48:49.720 -07 000000610 INF: LanePump: Current Position of Pump is: 1770 17-03-18 01:48:49.720 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:48:49.849 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 01:48:49.889 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:48:50.758 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:50.788 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:50.788 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete 17-03-18 01:48:50.788 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:48:50.917 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:50.947 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 01:48:50.947 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 01:48:51.077 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:48:51.107 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 01:48:51.107 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 01:48:51.107 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:48:51.237 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:48:51.267 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:51.696 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:48:51.726 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:48:51.726 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 01:48:51.726 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:51.726 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 65° =================== 17-03-18 01:48:51.726 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 65°, FC temperature to 65° =================== 17-03-18 01:48:51.726 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl] 17-03-18 01:48:51.726 -07 000000591 INF: FPGA: Recv TEC2TEMP 17-03-18 01:48:51.736 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:48:51.736 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 01:48:51.736 -07 000000447 INF: FPGA: Recv TEC2EN 17-03-18 01:48:51.746 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:48:51.746 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 65° =================== 17-03-18 01:48:51.746 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:48:51.746 -07 000000610 INF: WaitCommand(30000) start 17-03-18 01:48:52.943 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:52.943 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:48:53.303 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.994908, 17-03-18 01:48:57.275 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:48:57.285 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:48:58.653 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.012614, 17-03-18 01:49:02.266 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:02.276 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:04.003 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.031682, 17-03-18 01:49:07.257 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:07.267 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:09.353 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.030322, 17-03-18 01:49:12.257 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:12.257 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:14.703 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.014009, 17-03-18 01:49:17.248 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:17.248 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:20.053 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.030322, 17-03-18 01:49:21.700 -07 000000610 INF: WaitCommand(30000) end 17-03-18 01:49:21.700 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:49:21.700 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1 17-03-18 01:49:21.700 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:49:21.730 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n 17-03-18 01:49:21.730 -07 000000610 INF: LanePump: Current Position of Pump is: 1890 17-03-18 01:49:21.730 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:49:21.859 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r 17-03-18 01:49:21.899 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:49:22.239 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:22.239 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:22.438 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:22.468 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:22.468 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete 17-03-18 01:49:22.468 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:49:22.598 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:49:22.628 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 01:49:22.628 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-18 01:49:22.758 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:49:22.788 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 01:49:22.788 -07 000000610 INF: LanePump: Current Position of Pump is: 1920 17-03-18 01:49:22.788 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:49:22.917 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:49:22.947 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:23.376 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:23.406 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:23.406 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 01:49:23.406 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:49:23.406 -07 000000447 INF: WaitCommand(30000) start 17-03-18 01:49:23.406 -07 000000512 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 01:49:23.406 -07 000000512 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 01:49:24.624 -07 000000512 INF: AsyncDelayTimer waited 1215ms 17-03-18 01:49:24.624 -07 000000512 INF: LanePump: Xmit /1?\r 17-03-18 01:49:24.654 -07 000000512 INF: LanePump: Recv /0`1920(0x03)\r\n 17-03-18 01:49:24.654 -07 000000512 INF: LanePump: Current Position of Pump is: 1920 17-03-18 01:49:24.784 -07 000000512 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 01:49:24.824 -07 000000512 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:49:26.021 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.02213, 17-03-18 01:49:27.159 -07 000000512 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:27.189 -07 000000512 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:49:27.229 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:27.229 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:27.609 -07 000000512 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:27.638 -07 000000512 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:27.638 -07 000000512 INF: LanePump: Waited 2819 ms for pump motion to complete 17-03-18 01:49:27.638 -07 000000512 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 01:49:27.638 -07 000000512 INF: =================== =================== 17-03-18 01:49:31.371 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.009895, 17-03-18 01:49:32.220 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:32.220 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:36.721 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.994908, 17-03-18 01:49:37.211 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:37.211 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:42.071 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.966297, 17-03-18 01:49:42.201 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:42.201 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:47.192 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:47.192 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:47.471 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.971733, 17-03-18 01:49:52.182 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:52.182 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:52.821 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.989471, 17-03-18 01:49:53.360 -07 000000447 INF: WaitCommand(30000) end 17-03-18 01:49:53.360 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 22° =================== 17-03-18 01:49:53.360 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 22°, FC temperature to 22° =================== 17-03-18 01:49:53.360 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl] 17-03-18 01:49:53.360 -07 000000487 INF: FPGA: Recv TEC2TEMP 17-03-18 01:49:53.370 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:49:53.370 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl] 17-03-18 01:49:53.370 -07 000000592 INF: FPGA: Recv TEC2EN 17-03-18 01:49:53.380 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:49:53.380 -07 000000610 INF: =================== Cycle #92, Flow Cell Temp 22° =================== 17-03-18 01:49:53.380 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:49:53.380 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:49:53.380 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1 17-03-18 01:49:53.380 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:49:53.420 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n 17-03-18 01:49:53.420 -07 000000610 INF: LanePump: Current Position of Pump is: 0 17-03-18 01:49:53.420 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:49:53.550 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r 17-03-18 01:49:53.590 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:49:56.724 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:56.754 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:49:57.173 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:57.173 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:49:57.173 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1421, R2=1477, Total=2898. Warn if over 250 bubbles per interval. 17-03-18 01:49:57.203 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:49:57.622 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:57.652 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:57.652 -07 000000610 INF: LanePump: Waited 4069 ms for pump motion to complete 17-03-18 01:49:57.652 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:49:57.782 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:49:57.812 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 01:49:57.812 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 01:49:57.942 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:49:57.972 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 01:49:57.972 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 01:49:57.972 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:49:58.101 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:49:58.131 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:58.171 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.996267, 17-03-18 01:49:58.561 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:49:58.590 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:49:58.590 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 01:49:58.590 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:49:59.808 -07 000000610 INF: AsyncDelayTimer waited 1220ms 17-03-18 01:49:59.808 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start 17-03-18 01:49:59.808 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:49:59.828 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:49:59.828 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions. 17-03-18 01:49:59.828 -07 000000610 INF: ReagentValve: Xmit -02\r 17-03-18 01:49:59.978 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:49:59.998 -07 000000610 INF: ReagentValve: Recv 00E2\r 17-03-18 01:49:59.998 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 226 steps, expected 204. Error = 22 steps (10.8%) 17-03-18 01:50:00.048 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:50:00.068 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-18 01:50:00.068 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:50:00.168 -07 000000610 INF: =================== Cycle #92, Pumping Reagent USM (2) =================== 17-03-18 01:50:00.168 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1 17-03-18 01:50:00.168 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:50:00.197 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n 17-03-18 01:50:00.197 -07 000000610 INF: LanePump: Current Position of Pump is: 720 17-03-18 01:50:00.197 -07 000000610 INF: =================== Cycle #92, Pumping Reagent USM (2), Aspirating port InputPort =================== 17-03-18 01:50:00.327 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r 17-03-18 01:50:00.367 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:50:01.804 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:01.834 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:50:02.164 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1 17-03-18 01:50:02.164 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:02.254 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:02.284 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:02.284 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete 17-03-18 01:50:02.284 -07 000000610 INF: =================== Cycle #92, Pumping Reagent USM (2) =================== 17-03-18 01:50:02.413 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:50:02.443 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 01:50:02.443 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 01:50:02.573 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:50:02.603 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 01:50:02.603 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 01:50:02.603 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:50:02.733 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:50:02.763 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:03.192 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:03.222 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:03.222 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete 17-03-18 01:50:03.222 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:50:03.531 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.007176, 17-03-18 01:50:04.440 -07 000000610 INF: AsyncDelayTimer waited 1218ms 17-03-18 01:50:04.440 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start 17-03-18 01:50:04.440 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:50:04.459 -07 000000610 INF: ReagentValve: Recv 02\r 17-03-18 01:50:04.459 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions. 17-03-18 01:50:04.459 -07 000000610 INF: ReagentValve: Xmit +03\r 17-03-18 01:50:04.609 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:50:04.629 -07 000000610 INF: ReagentValve: Recv 00E2\r 17-03-18 01:50:04.629 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 226 steps, expected 204. Error = 22 steps (10.8%) 17-03-18 01:50:04.679 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:50:04.699 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:50:04.699 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating 17-03-18 01:50:04.799 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:50:04.799 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1 17-03-18 01:50:04.799 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:50:04.829 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n 17-03-18 01:50:04.829 -07 000000610 INF: LanePump: Current Position of Pump is: 990 17-03-18 01:50:04.829 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3), Aspirating port InputPort =================== 17-03-18 01:50:04.959 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r 17-03-18 01:50:04.998 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:50:05.867 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:05.897 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:05.897 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete 17-03-18 01:50:05.897 -07 000000610 INF: =================== Cycle #92, Pumping Reagent PR2 (3) =================== 17-03-18 01:50:06.027 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:50:06.056 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 01:50:06.056 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 01:50:06.186 -07 000000610 INF: LanePump: Xmit /1?\r 17-03-18 01:50:06.216 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 01:50:06.216 -07 000000610 INF: LanePump: Current Position of Pump is: 1110 17-03-18 01:50:06.216 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 17-03-18 01:50:06.346 -07 000000610 INF: LanePump: Xmit /1IR\r 17-03-18 01:50:06.376 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:06.805 -07 000000610 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:06.835 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:06.835 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete 17-03-18 01:50:06.835 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:50:06.835 -07 000000512 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 01:50:06.835 -07 000000579 INF: WaitCommand(10000) start 17-03-18 01:50:06.835 -07 000000512 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort =================== 17-03-18 01:50:07.154 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:07.154 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:08.053 -07 000000512 INF: AsyncDelayTimer waited 1216ms 17-03-18 01:50:08.053 -07 000000512 INF: LanePump: Xmit /1?\r 17-03-18 01:50:08.083 -07 000000512 INF: LanePump: Recv /0`1110(0x03)\r\n 17-03-18 01:50:08.083 -07 000000512 INF: LanePump: Current Position of Pump is: 1110 17-03-18 01:50:08.212 -07 000000512 INF: LanePump: Xmit /1V1500OA0R\r 17-03-18 01:50:08.252 -07 000000512 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:50:08.891 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.977204, 17-03-18 01:50:09.780 -07 000000512 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:09.809 -07 000000512 INF: LanePump: Recv /0@(0x03)\r\n 17-03-18 01:50:10.229 -07 000000512 INF: LanePump: Xmit /1Q\r 17-03-18 01:50:10.259 -07 000000512 INF: LanePump: Recv /0`(0x03)\r\n 17-03-18 01:50:10.259 -07 000000512 INF: LanePump: Waited 2009 ms for pump motion to complete 17-03-18 01:50:10.259 -07 000000512 INF: =================== Dispense to DispenseAndWait =================== 17-03-18 01:50:10.259 -07 000000512 INF: =================== =================== 17-03-18 01:50:12.145 -07 000000592 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:12.145 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:14.251 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.993549, 17-03-18 01:50:16.826 -07 000000579 INF: WaitCommand(10000) end 17-03-18 01:50:16.826 -07 000000610 INF: =================== Cycle #92, Imaging =================== 17-03-18 01:50:16.826 -07 000000610 INF: Imaging Cycle 92: ScanTilesCommand Cycle 92 time start. 17-03-18 01:50:16.836 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand 17-03-18 01:50:16.836 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:50:16.856 -07 000000610 INF: ReagentValve: Recv 03\r 17-03-18 01:50:16.856 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions. 17-03-18 01:50:16.856 -07 000000610 INF: ReagentValve: Xmit -18\r 17-03-18 01:50:17.136 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:17.136 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:17.156 -07 000000610 INF: ReagentValve: Xmit B\r 17-03-18 01:50:17.176 -07 000000610 INF: ReagentValve: Recv 0278\r 17-03-18 01:50:17.176 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%) 17-03-18 01:50:17.226 -07 000000610 INF: ReagentValve: Xmit S\r 17-03-18 01:50:17.246 -07 000000610 INF: ReagentValve: Recv 18\r 17-03-18 01:50:17.246 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:17.246 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:17.246 -07 000000487 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start. 17-03-18 01:50:17.246 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:17.246 -07 000000487 INF: FPGA: Xmit EXLED1ON\n [RedLED] 17-03-18 01:50:17.246 -07 000000592 INF: FPGA: Recv EXLED1ON 17-03-18 01:50:17.256 -07 000000487 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:50:17.256 -07 000000487 INF: FPGA: Xmit EXLED1ADCR\n [RedLED] 17-03-18 01:50:17.256 -07 000000480 INF: FPGA: Recv EXLED1ADCR 23236 17-03-18 01:50:17.265 -07 000000487 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:17.265 -07 000000487 INF: RedLED: Using Red data: Photodiode ADC 23236 --> 7.5 mW (old method), or 205.9 mW (new method). Difference = 198.4 mW 17-03-18 01:50:17.265 -07 000000487 INF: FPGA: Xmit EXLED1OFF\n [RedLED] 17-03-18 01:50:17.265 -07 000000447 INF: FPGA: Recv EXLED1OFF 17-03-18 01:50:17.275 -07 000000487 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:17.275 -07 000000487 INF: RedLED: LED was on for 20 ms 17-03-18 01:50:17.275 -07 000000487 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 24 ms. 17-03-18 01:50:17.275 -07 000000487 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start. 17-03-18 01:50:17.275 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:17.275 -07 000000487 INF: FPGA: Xmit EXLED2ON\n [GreenLED] 17-03-18 01:50:17.275 -07 000000592 INF: FPGA: Recv EXLED2ON 17-03-18 01:50:17.285 -07 000000487 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:17.285 -07 000000487 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-18 01:50:17.285 -07 000000480 INF: FPGA: Recv EXLED1ADCR 2094 17-03-18 01:50:17.295 -07 000000487 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:50:17.295 -07 000000487 INF: GreenLED: Using Green data: Photodiode ADC 2094 --> 0.9 mW (old method), or 182.0 mW (new method). Difference = 181.1 mW 17-03-18 01:50:17.295 -07 000000487 INF: FPGA: Xmit EXLED2OFF\n [GreenLED] 17-03-18 01:50:17.295 -07 000000512 INF: FPGA: Recv EXLED2OFF 17-03-18 01:50:17.305 -07 000000487 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:17.305 -07 000000487 INF: GreenLED: LED was on for 14 ms 17-03-18 01:50:17.305 -07 000000487 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms. 17-03-18 01:50:17.305 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-18 01:50:17.305 -07 000000447 INF: FPGA: Recv EMCUR 17-03-18 01:50:17.315 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:50:17.315 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator] 17-03-18 01:50:17.814 -07 000000487 INF: FPGA: Recv EMOUT 17-03-18 01:50:17.814 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 493 ms to get response, and 502 ms overall 17-03-18 01:50:17.814 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator] 17-03-18 01:50:17.814 -07 000000480 INF: FPGA: Recv EMCUR 17-03-18 01:50:17.824 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:50:17.824 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 01:50:17.824 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.38427734375, Z-Position -0.126625504122203. ------ 17-03-18 01:50:17.824 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:17.824 -07 000000592 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17890 mm 17-03-18 01:50:17.824 -07 000000592 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:17.824 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-18 01:50:17.824 -07 000000480 INF: Y Motor: Moving to 59.9126 mm, started at 75.3843 mm, delta = -15.4717 mm 17-03-18 01:50:17.824 -07 000000512 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:17.824 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 39082, sync = True, waitForSettling = False) 17-03-18 01:50:17.834 -07 000000579 INF: Z Motor: Moving to -0.178906 mm, started at -0.126626 mm, distance = -52.28 um 17-03-18 01:50:17.834 -07 000000579 INF: FPGA: Xmit ZDACW 39082\n [Z Motor] 17-03-18 01:50:17.834 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:50:17.834 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 01:50:17.844 -07 000000579 INF: FPGA: 'ZDACW 39082' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:17.844 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:50:17.854 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:17.854 -07 000000629 INF: FPGA: Recv YRDPOS 154387 17-03-18 01:50:17.864 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:17.864 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 30 ms overall 17-03-18 01:50:17.864 -07 000000480 INF: Y Motor: Encoder = 154387 = motor step 120614.8 = 75.3843 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:17.864 -07 000000480 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False 17-03-18 01:50:17.864 -07 000000480 INF: Y Motor: Moving to 122701 encoder counts 17-03-18 01:50:17.864 -07 000000591 INF: FPGA: Recv ZDACR 39082 17-03-18 01:50:17.874 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:50:17.874 -07 000000480 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-18 01:50:17.874 -07 000000579 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet)) 17-03-18 01:50:18.044 -07 000000561 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:50:18.044 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 210 ms overall 17-03-18 01:50:19.551 -07 000000626 INF: FPGA: Recv YMVTO 122703 24784 17-03-18 01:50:19.551 -07 000000480 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1676 ms to get response, and 1696 ms overall 17-03-18 01:50:19.551 -07 000000480 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm) 17-03-18 01:50:19.551 -07 000000480 INF: Y Motor: To move from 75.384 to 59.913 (-15.472 mm) should take 24755 steps, but required 24784 steps (15.490 mm). Slippage = 0.018 mm (0.00%). 17-03-18 01:50:19.551 -07 000000480 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1696 ms, distance = 15.472 mm, average velocity = 9.122 mm/sec 17-03-18 01:50:19.611 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.028963, 17-03-18 01:50:22.126 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:22.126 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:22.396 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:22.396 -07 000000606 INF: FPGA: Recv YRDPOS 122696 17-03-18 01:50:22.406 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.406 -07 000000480 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:22.426 -07 000000480 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:22.426 -07 000000480 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm) 17-03-18 01:50:22.426 -07 000000480 INF: Y Motor: Moved to 59.9102 after 4608 ms 17-03-18 01:50:22.436 -07 000000592 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178906 mm (DAC = 39082) 17-03-18 01:50:22.436 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.436 -07 000000501 INF: FPGA: Recv ZSGSRD 37144 17-03-18 01:50:22.446 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:22.446 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.446 -07 000000579 INF: FPGA: Recv ZSGSRD 37136 17-03-18 01:50:22.456 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.456 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.456 -07 000000618 INF: FPGA: Recv ZSGSRD 37142 17-03-18 01:50:22.466 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.466 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.466 -07 000000591 INF: FPGA: Recv ZSGSRD 37136 17-03-18 01:50:22.476 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.476 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.476 -07 000000501 INF: FPGA: Recv ZSGSRD 37140 17-03-18 01:50:22.486 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.486 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.486 -07 000000626 INF: FPGA: Recv ZSGSRD 37147 17-03-18 01:50:22.496 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.496 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.496 -07 000000487 INF: FPGA: Recv ZSGSRD 37139 17-03-18 01:50:22.506 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.506 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.506 -07 000000591 INF: FPGA: Recv ZSGSRD 37143 17-03-18 01:50:22.516 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.516 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.516 -07 000000501 INF: FPGA: Recv ZSGSRD 37142 17-03-18 01:50:22.526 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.526 -07 000000592 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:22.526 -07 000000579 INF: FPGA: Recv ZSGSRD 37138 17-03-18 01:50:22.536 -07 000000592 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.536 -07 000000592 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:22.536 -07 000000487 INF: FPGA: Recv ZPIEZORD 33432 17-03-18 01:50:22.546 -07 000000592 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:22.546 -07 000000592 INF: Z Motor: Piezo is near 51.4 V (nominally 0 to 100 V), expect near 59.6 V, since DAC is at 5.964 V. Piezo Error = -8.2 V. 17-03-18 01:50:22.546 -07 000000592 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.9 um, Read 10 ADC samples: Avg = 37141 (-178.0 uncal um), Error = 0.9 uncal um, Median = 37141 (-178.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 37136 (-178.0 uncal um), Max = 37147 (-178.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:50:22.546 -07 000000592 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37141, posNoise = 6, negNoise = 5 17-03-18 01:50:22.546 -07 000000592 INF: Z Motor: After move to -0.178906, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:22.546 -07 000000592 INF: Z Motor: Settle wait time = 4612 ms, measure time = 108 ms (allowed 150 ms), total time = 4720 ms 17-03-18 01:50:22.546 -07 000000592 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:22.596 -07 000000592 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4773 ms 17-03-18 01:50:22.596 -07 000000592 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:22.596 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:22.596 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:22.596 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:22.596 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:22.596 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:50:22.596 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:22.596 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:22.596 -07 000000629 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-18 01:50:22.625 -07 000000629 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 23 ms. 17-03-18 01:50:22.625 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:50:22.625 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-18 01:50:22.625 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:50:22.645 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-18 01:50:22.645 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 43 ms. 17-03-18 01:50:22.645 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:50:22.685 -07 000000576 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:50:22.985 -07 000000629 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:50:22.985 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:50:22.985 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:50:22.995 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start. 17-03-18 01:50:23.025 -07 000000487 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:50:23.025 -07 000000424 INF: FPGA: Recv CAMSNAP 17-03-18 01:50:23.025 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall 17-03-18 01:50:23.115 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 01:50:23.115 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:23.115 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:50:23.115 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 01:50:23.224 -07 000000444 INF: Image SNR check: start 17-03-18 01:50:23.224 -07 000000576 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:23.234 -07 000000579 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:23.234 -07 000000576 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:50:23.234 -07 000000576 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:50:23.244 -07 000000444 INF: Image SNR check: pass [peak (Max-Min)=130.29] 17-03-18 01:50:23.244 -07 000000444 INF: Autofocus start 17-03-18 01:50:23.244 -07 000000444 INF: MeasureProfile start 17-03-18 01:50:23.254 -07 000000444 INF: MeasureProfile done 17-03-18 01:50:23.254 -07 000000444 INF: X=32 Z correction [um]=0.09220707 17-03-18 01:50:23.254 -07 000000444 INF: Autofocus finished 17-03-18 01:50:23.434 -07 000000430 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:50:23.434 -07 000000576 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall 17-03-18 01:50:23.444 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178925015168279. ---------- 17-03-18 01:50:23.444 -07 000000610 INF: Cycle 92 Tile 1 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:23.444 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37614, sync = True, waitForSettling = True) 17-03-18 01:50:23.444 -07 000000610 INF: Z Motor: Moving to -0.172186 mm, started at -0.178925 mm, distance = 6.74 um 17-03-18 01:50:23.444 -07 000000610 INF: FPGA: Xmit ZDACW 37614\n [Z Motor] 17-03-18 01:50:23.444 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 01:50:23.454 -07 000000610 INF: FPGA: 'ZDACW 37614' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:23.454 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:23.454 -07 000000561 INF: FPGA: Recv ZDACR 37614 17-03-18 01:50:23.464 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.464 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:23.614 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.614 -07 000000606 INF: FPGA: Recv ZSGSRD 36102 17-03-18 01:50:23.624 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:23.624 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.624 -07 000000430 INF: FPGA: Recv ZSGSRD 36096 17-03-18 01:50:23.634 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.634 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.634 -07 000000629 INF: FPGA: Recv ZSGSRD 36098 17-03-18 01:50:23.644 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.644 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.644 -07 000000592 INF: FPGA: Recv ZSGSRD 36090 17-03-18 01:50:23.654 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.654 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.654 -07 000000447 INF: FPGA: Recv ZSGSRD 36093 17-03-18 01:50:23.664 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.664 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.664 -07 000000591 INF: FPGA: Recv ZSGSRD 36094 17-03-18 01:50:23.673 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.673 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.673 -07 000000576 INF: FPGA: Recv ZSGSRD 36093 17-03-18 01:50:23.683 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.683 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.683 -07 000000487 INF: FPGA: Recv ZSGSRD 36100 17-03-18 01:50:23.693 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.693 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.693 -07 000000591 INF: FPGA: Recv ZSGSRD 36091 17-03-18 01:50:23.703 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.703 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:23.703 -07 000000591 INF: FPGA: Recv ZSGSRD 36093 17-03-18 01:50:23.713 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.713 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:23.713 -07 000000501 INF: FPGA: Recv ZPIEZORD 32015 17-03-18 01:50:23.723 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:23.723 -07 000000610 INF: Z Motor: Piezo is near 48.4 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.740 V. Piezo Error = -9.0 V. 17-03-18 01:50:23.723 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36095 (-171.3 uncal um), Error = 0.9 uncal um, Median = 36094 (-171.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36090 (-171.3 uncal um), Max = 36102 (-171.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:50:23.723 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36095, posNoise = 7, negNoise = 5 17-03-18 01:50:23.723 -07 000000610 INF: Z Motor: After move to -0.172186, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:23.723 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 01:50:23.723 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:23.723 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:23.723 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:23.723 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:23.723 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:23.723 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:23.723 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:23.723 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:23.723 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:23.723 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:23.723 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:23.723 -07 000000501 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-18 01:50:23.733 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:23.733 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:23.743 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 01:50:23.743 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 01:50:23.753 -07 000000501 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms. 17-03-18 01:50:23.753 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:23.753 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:50:23.753 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:23.763 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-18 01:50:23.763 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 39 ms. 17-03-18 01:50:23.763 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37791 150\n [Camera] 17-03-18 01:50:23.963 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:24.362 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:24.362 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:24.362 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:24.362 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:24.362 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:50:24.362 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:24.362 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:24.362 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:24.362 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:24.362 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:50:24.552 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37791 777 17-03-18 01:50:24.702 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:24.751 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 01:50:24.751 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 01:50:24.751 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:24.761 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 397 ms. 17-03-18 01:50:24.761 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 01:50:24.761 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:24.761 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms. 17-03-18 01:50:24.761 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:50:24.771 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 01:50:24.771 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-18 01:50:24.891 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:24.891 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:24.891 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:25.001 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:25.001 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:25.001 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:25.001 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 01:50:25.001 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:25.011 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.019446, 17-03-18 01:50:25.011 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:25.011 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:50:25.081 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:50:25.081 -07 000000424 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:25.081 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37791 150' command took 4 ms to send, 1303 ms to get response, and 1314 ms overall 17-03-18 01:50:25.081 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.172220 17-03-18 01:50:25.081 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17222 mm 17-03-18 01:50:25.081 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:25.081 -07 000000430 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-18 01:50:25.081 -07 000000430 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm 17-03-18 01:50:25.081 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:25.081 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37621, sync = True, waitForSettling = False) 17-03-18 01:50:25.081 -07 000000618 INF: Z Motor: Moving to -0.172218 mm, started at -0.172205 mm, distance = -0.01 um 17-03-18 01:50:25.091 -07 000000618 INF: FPGA: Xmit ZDACW 37621\n [Z Motor] 17-03-18 01:50:25.091 -07 000000487 INF: FPGA: Recv YRDPOS 122696 17-03-18 01:50:25.091 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 01:50:25.091 -07 000000430 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:25.091 -07 000000430 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:25.091 -07 000000430 INF: Y Motor: Moving 1332 steps2 17-03-18 01:50:25.091 -07 000000579 INF: FPGA: Recv ZDACW 17-03-18 01:50:25.101 -07 000000618 INF: FPGA: 'ZDACW 37621' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 01:50:25.101 -07 000000430 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:25.111 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:25.111 -07 000000591 INF: FPGA: Recv ZDACR 37621 17-03-18 01:50:25.121 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:50:25.121 -07 000000618 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet)) 17-03-18 01:50:25.400 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 402 ms. 17-03-18 01:50:25.400 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 01:50:25.400 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:25.410 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:25.410 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms. 17-03-18 01:50:25.410 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 01:50:25.410 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:50:25.410 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:25.410 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:25.420 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms. 17-03-18 01:50:25.470 -07 000000501 INF: FPGA: Recv YMVTILE 17-03-18 01:50:25.470 -07 000000430 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall 17-03-18 01:50:25.510 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:25.510 -07 000000512 INF: FPGA: Recv YRDPOS 124378 17-03-18 01:50:25.520 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:50:25.520 -07 000000430 INF: Y Motor: Encoder = 124378 = motor step 97170.3 = 60.7314 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:25.520 -07 000000430 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm) 17-03-18 01:50:25.520 -07 000000430 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.832 mm, average velocity = 2.157 mm/sec 17-03-18 01:50:26.468 -07 000000430 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:26.468 -07 000000591 INF: FPGA: Recv YRDPOS 124379 17-03-18 01:50:26.478 -07 000000430 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:26.478 -07 000000430 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:26.498 -07 000000430 INF: Y Motor: After move to 60.742607, error = -0.010674, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:26.498 -07 000000430 INF: Y Motor: Position error after settling (table move) = -22 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:50:26.498 -07 000000430 INF: Y Motor: Moved to 60.7319 after 1420 ms (table move) 17-03-18 01:50:26.508 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.172218 mm (DAC = 37621) 17-03-18 01:50:26.508 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.508 -07 000000512 INF: FPGA: Recv ZSGSRD 36102 17-03-18 01:50:26.518 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:26.518 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.518 -07 000000591 INF: FPGA: Recv ZSGSRD 36103 17-03-18 01:50:26.528 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.528 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.528 -07 000000512 INF: FPGA: Recv ZSGSRD 36104 17-03-18 01:50:26.538 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.538 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.538 -07 000000579 INF: FPGA: Recv ZSGSRD 36096 17-03-18 01:50:26.548 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.548 -07 000000591 INF: FPGA: Recv ZSGSRD 36102 17-03-18 01:50:26.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.558 -07 000000430 INF: FPGA: Recv ZSGSRD 36096 17-03-18 01:50:26.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.568 -07 000000501 INF: FPGA: Recv ZSGSRD 36101 17-03-18 01:50:26.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.578 -07 000000430 INF: FPGA: Recv ZSGSRD 36098 17-03-18 01:50:26.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.588 -07 000000591 INF: FPGA: Recv ZSGSRD 36096 17-03-18 01:50:26.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.598 -07 000000430 INF: FPGA: Recv ZSGSRD 36104 17-03-18 01:50:26.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.608 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:26.608 -07 000000512 INF: FPGA: Recv ZPIEZORD 32058 17-03-18 01:50:26.618 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.618 -07 000000610 INF: Z Motor: Piezo is near 48.5 V (nominally 0 to 100 V), expect near 57.4 V, since DAC is at 5.741 V. Piezo Error = -8.9 V. 17-03-18 01:50:26.618 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -172.2 um, Read 10 ADC samples: Avg = 36100 (-171.4 uncal um), Error = 0.9 uncal um, Median = 36102 (-171.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 36096 (-171.3 uncal um), Max = 36104 (-171.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:50:26.618 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36100, posNoise = 4, negNoise = 4 17-03-18 01:50:26.618 -07 000000610 INF: Z Motor: After move to -0.172218, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:26.618 -07 000000610 INF: Z Motor: Settle wait time = 1423 ms, measure time = 109 ms (allowed 150 ms), total time = 1532 ms 17-03-18 01:50:26.618 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:26.668 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1584 ms 17-03-18 01:50:26.668 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:26.668 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73193359375, Z-position -0.172237410328706. ---------- 17-03-18 01:50:26.668 -07 000000610 INF: Cycle 92 Tile 2 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:26.668 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37445, sync = True, waitForSettling = True) 17-03-18 01:50:26.668 -07 000000610 INF: Z Motor: Moving to -0.171412 mm, started at -0.172237 mm, distance = 0.83 um 17-03-18 01:50:26.668 -07 000000610 INF: FPGA: Xmit ZDACW 37445\n [Z Motor] 17-03-18 01:50:26.668 -07 000000424 INF: FPGA: Recv ZDACW 17-03-18 01:50:26.678 -07 000000610 INF: FPGA: 'ZDACW 37445' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:50:26.678 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:26.678 -07 000000512 INF: FPGA: Recv ZDACR 37445 17-03-18 01:50:26.688 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.688 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:26.838 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.838 -07 000000579 INF: FPGA: Recv ZSGSRD 35973 17-03-18 01:50:26.848 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:26.848 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.848 -07 000000447 INF: FPGA: Recv ZSGSRD 35975 17-03-18 01:50:26.858 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.858 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.858 -07 000000501 INF: FPGA: Recv ZSGSRD 35980 17-03-18 01:50:26.867 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.867 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.867 -07 000000591 INF: FPGA: Recv ZSGSRD 35974 17-03-18 01:50:26.877 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.877 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.877 -07 000000424 INF: FPGA: Recv ZSGSRD 35975 17-03-18 01:50:26.887 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.887 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.887 -07 000000447 INF: FPGA: Recv ZSGSRD 35973 17-03-18 01:50:26.897 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.897 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.897 -07 000000501 INF: FPGA: Recv ZSGSRD 35973 17-03-18 01:50:26.907 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.907 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.907 -07 000000430 INF: FPGA: Recv ZSGSRD 35981 17-03-18 01:50:26.917 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.917 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.917 -07 000000424 INF: FPGA: Recv ZSGSRD 35967 17-03-18 01:50:26.927 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.927 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:26.927 -07 000000579 INF: FPGA: Recv ZSGSRD 35975 17-03-18 01:50:26.937 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.937 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:26.937 -07 000000591 INF: FPGA: Recv ZPIEZORD 31871 17-03-18 01:50:26.947 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:26.947 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.714 V. Piezo Error = -9.1 V. 17-03-18 01:50:26.947 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.4 um, Read 10 ADC samples: Avg = 35975 (-170.6 uncal um), Error = 0.9 uncal um, Median = 35974 (-170.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35967 (-170.5 uncal um), Max = 35981 (-170.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:50:26.947 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35975, posNoise = 6, negNoise = 8 17-03-18 01:50:26.947 -07 000000610 INF: Z Motor: After move to -0.171412, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:26.947 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 01:50:26.947 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:26.947 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:26.947 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:26.947 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:26.947 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:26.947 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:26.947 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:26.947 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:26.947 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:26.947 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:26.947 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:26.947 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:26.957 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:26.957 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:26.957 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:50:26.957 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:26.967 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:50:26.967 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:26.967 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:50:26.967 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:26.967 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37621 150\n [Camera] 17-03-18 01:50:27.117 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:27.117 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:27.167 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:27.566 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:27.566 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:27.566 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:27.566 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:27.566 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:27.566 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:27.566 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:27.566 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 01:50:27.566 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:27.566 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:50:27.756 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37621 777 17-03-18 01:50:27.906 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:27.965 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 396 ms. 17-03-18 01:50:27.965 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:50:27.965 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:27.965 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 399 ms. 17-03-18 01:50:27.965 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 01:50:27.965 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:27.975 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:27.975 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms. 17-03-18 01:50:27.975 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:27.975 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 01:50:28.095 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:28.095 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:28.095 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:28.095 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:28.095 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 01:50:28.095 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:28.095 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:28.095 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:28.095 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:28.095 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 01:50:28.484 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 383 ms. 17-03-18 01:50:28.484 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms. 17-03-18 01:50:28.484 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:28.484 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:28.484 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 391 ms. 17-03-18 01:50:28.484 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 01:50:28.484 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:28.484 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:28.484 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 01:50:28.494 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:50:28.494 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:50:28.494 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:28.494 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37621 150' command took 2 ms to send, 1519 ms to get response, and 1530 ms overall 17-03-18 01:50:28.504 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 01:50:28.504 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.73193359375, Z-Position -0.171434383810985. ------ 17-03-18 01:50:28.504 -07 000000487 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:28.504 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17800 mm 17-03-18 01:50:28.504 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:29.023 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-18 01:50:29.023 -07 000000480 INF: Y Motor: Moving to 61.5726 mm, started at 60.7319 mm, delta = 0.8407 mm 17-03-18 01:50:29.023 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:30.022 -07 000000444 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:30.022 -07 000000444 INF: FPGA: Recv YRDPOS 124379 17-03-18 01:50:30.022 -07 000000487 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1510 ms to get response, and 1516 ms overall 17-03-18 01:50:30.022 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 990 ms to get response, and 998 ms overall 17-03-18 01:50:30.022 -07 000000480 INF: Y Motor: Encoder = 124379 = motor step 97171.1 = 60.7319 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:30.022 -07 000000480 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:30.022 -07 000000480 INF: Y Motor: Moving 1345 steps-23 17-03-18 01:50:30.022 -07 000000487 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:50:30.022 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 38884, sync = True, waitForSettling = False) 17-03-18 01:50:30.022 -07 000000444 INF: Z Motor: Moving to -0.178000 mm, started at -0.171434 mm, distance = -6.57 um 17-03-18 01:50:30.032 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:30.042 -07 000000444 INF: FPGA: Xmit ZDACW 38884\n [Z Motor] 17-03-18 01:50:31.020 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 01:50:31.020 -07 000000561 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:50:31.020 -07 000000561 INF: FPGA: Recv YMVTILE 17-03-18 01:50:31.020 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 987 ms to get response, and 1005 ms overall 17-03-18 01:50:31.020 -07 000000487 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 997 ms to get response, and 1006 ms overall 17-03-18 01:50:31.020 -07 000000444 INF: FPGA: 'ZDACW 38884' command took 0 ms to send, 977 ms to get response, and 1004 ms overall 17-03-18 01:50:31.030 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:31.030 -07 000000561 INF: FPGA: Recv ZDACR 38884 17-03-18 01:50:31.040 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 01:50:31.040 -07 000000444 INF: Z Motor: MoveAbsStepped took 1017 ms (did NOT wait for settling yet)) 17-03-18 01:50:31.070 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:31.080 -07 000000626 INF: FPGA: Recv YRDPOS 126080 17-03-18 01:50:31.080 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:50:31.080 -07 000000480 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:31.080 -07 000000480 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 01:50:31.080 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 1006 ms, distance = 0.841 mm, average velocity = 0.836 mm/sec 17-03-18 01:50:31.329 -07 000000487 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.016692, 17-03-18 01:50:32.028 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:32.028 -07 000000629 INF: FPGA: Recv YRDPOS 126080 17-03-18 01:50:32.038 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.038 -07 000000480 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:32.058 -07 000000480 INF: Y Motor: After move to 61.572609, error = -0.010109, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:32.058 -07 000000480 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:32.058 -07 000000480 INF: Y Motor: Moved to 61.5625 after 3048 ms (table move) 17-03-18 01:50:32.068 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178000 mm (DAC = 38884) 17-03-18 01:50:32.068 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.068 -07 000000561 INF: FPGA: Recv ZSGSRD 37001 17-03-18 01:50:32.078 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:50:32.078 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.078 -07 000000592 INF: FPGA: Recv ZSGSRD 37001 17-03-18 01:50:32.088 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.088 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.088 -07 000000626 INF: FPGA: Recv ZSGSRD 36995 17-03-18 01:50:32.098 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.098 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.098 -07 000000561 INF: FPGA: Recv ZSGSRD 36999 17-03-18 01:50:32.108 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.108 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.108 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:32.108 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:32.108 -07 000000629 INF: FPGA: Recv ZSGSRD 37002 17-03-18 01:50:32.118 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.118 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.118 -07 000000592 INF: FPGA: Recv ZSGSRD 37006 17-03-18 01:50:32.128 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.128 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.128 -07 000000487 INF: FPGA: Recv ZSGSRD 37000 17-03-18 01:50:32.138 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.138 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.138 -07 000000561 INF: FPGA: Recv ZSGSRD 36994 17-03-18 01:50:32.148 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.148 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.148 -07 000000487 INF: FPGA: Recv ZSGSRD 37000 17-03-18 01:50:32.158 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.158 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:32.158 -07 000000592 INF: FPGA: Recv ZSGSRD 36997 17-03-18 01:50:32.168 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.168 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:32.168 -07 000000561 INF: FPGA: Recv ZPIEZORD 33279 17-03-18 01:50:32.178 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.178 -07 000000512 INF: Z Motor: Piezo is near 51.1 V (nominally 0 to 100 V), expect near 59.3 V, since DAC is at 5.933 V. Piezo Error = -8.2 V. 17-03-18 01:50:32.178 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.0 um, Read 10 ADC samples: Avg = 37000 (-177.1 uncal um), Error = 0.9 uncal um, Median = 37000 (-177.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36994 (-177.1 uncal um), Max = 37006 (-177.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:50:32.178 -07 000000512 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37000, posNoise = 6, negNoise = 6 17-03-18 01:50:32.178 -07 000000512 INF: Z Motor: After move to -0.178000, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:32.178 -07 000000512 INF: Z Motor: Settle wait time = 2050 ms, measure time = 107 ms (allowed 150 ms), total time = 2157 ms 17-03-18 01:50:32.178 -07 000000512 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:32.227 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 3725 ms 17-03-18 01:50:32.227 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:32.227 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:32.227 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:32.227 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:32.227 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:32.227 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:50:32.227 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:32.227 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:50:32.227 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:50:32.237 -07 000000629 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:50:32.237 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:50:32.247 -07 000000629 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms. 17-03-18 01:50:32.247 -07 000000629 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms. 17-03-18 01:50:32.247 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:50:32.297 -07 000000592 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:50:32.597 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:50:32.597 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:50:32.597 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:50:32.597 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start. 17-03-18 01:50:32.627 -07 000000480 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:50:32.637 -07 000000512 INF: FPGA: Recv CAMSNAP 17-03-18 01:50:32.637 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall 17-03-18 01:50:32.717 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 125 ms. 17-03-18 01:50:32.717 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:32.717 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:50:32.717 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms. 17-03-18 01:50:32.737 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:32.737 -07 000000626 INF: Autofocus start 17-03-18 01:50:32.737 -07 000000626 INF: MeasureProfile start 17-03-18 01:50:32.737 -07 000000487 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:32.746 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:50:32.746 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:50:32.746 -07 000000626 INF: MeasureProfile done 17-03-18 01:50:32.746 -07 000000626 INF: X=32 Z correction [um]=0.09220707 17-03-18 01:50:32.746 -07 000000626 INF: Autofocus finished 17-03-18 01:50:32.946 -07 000000592 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:50:32.946 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 82 ms to get response, and 202 ms overall 17-03-18 01:50:32.946 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5625, Z-position -0.17801920125629. ---------- 17-03-18 01:50:32.946 -07 000000610 INF: Cycle 92 Tile 3 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:32.956 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37417, sync = True, waitForSettling = True) 17-03-18 01:50:32.956 -07 000000610 INF: Z Motor: Moving to -0.171284 mm, started at -0.178019 mm, distance = 6.74 um 17-03-18 01:50:32.956 -07 000000610 INF: FPGA: Xmit ZDACW 37417\n [Z Motor] 17-03-18 01:50:32.956 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:50:32.966 -07 000000610 INF: FPGA: 'ZDACW 37417' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.966 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:32.966 -07 000000480 INF: FPGA: Recv ZDACR 37417 17-03-18 01:50:32.976 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:32.976 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:33.126 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.126 -07 000000561 INF: FPGA: Recv ZSGSRD 35956 17-03-18 01:50:33.136 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.136 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.136 -07 000000480 INF: FPGA: Recv ZSGSRD 35953 17-03-18 01:50:33.146 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.146 -07 000000629 INF: FPGA: Recv ZSGSRD 35958 17-03-18 01:50:33.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.156 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.156 -07 000000626 INF: FPGA: Recv ZSGSRD 35950 17-03-18 01:50:33.166 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.166 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.166 -07 000000444 INF: FPGA: Recv ZSGSRD 35957 17-03-18 01:50:33.176 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.176 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.176 -07 000000480 INF: FPGA: Recv ZSGSRD 35951 17-03-18 01:50:33.186 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.186 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.186 -07 000000561 INF: FPGA: Recv ZSGSRD 35953 17-03-18 01:50:33.196 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.196 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.196 -07 000000444 INF: FPGA: Recv ZSGSRD 35956 17-03-18 01:50:33.206 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.206 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.206 -07 000000561 INF: FPGA: Recv ZSGSRD 35959 17-03-18 01:50:33.216 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.216 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:33.216 -07 000000512 INF: FPGA: Recv ZSGSRD 35958 17-03-18 01:50:33.226 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.226 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:33.226 -07 000000561 INF: FPGA: Recv ZPIEZORD 31830 17-03-18 01:50:33.236 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:33.236 -07 000000610 INF: Z Motor: Piezo is near 48.0 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.709 V. Piezo Error = -9.1 V. 17-03-18 01:50:33.236 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35955 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35956 (-170.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35950 (-170.4 uncal um), Max = 35959 (-170.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:50:33.236 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35955, posNoise = 4, negNoise = 5 17-03-18 01:50:33.236 -07 000000610 INF: Z Motor: After move to -0.171284, error = -0.000022, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:33.236 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 01:50:33.236 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:33.236 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:33.236 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:33.236 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:33.236 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:33.236 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:33.236 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:33.236 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:33.236 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:33.236 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:33.236 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:33.236 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:33.236 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:33.246 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:33.246 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:50:33.246 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:33.256 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms. 17-03-18 01:50:33.256 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms. 17-03-18 01:50:33.256 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms. 17-03-18 01:50:33.256 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 01:50:33.256 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37593 150\n [Camera] 17-03-18 01:50:33.455 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 193 17-03-18 01:50:33.844 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:33.854 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:33.854 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:33.854 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:33.854 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:33.854 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:33.854 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:33.854 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:50:33.854 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:33.854 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:50:34.044 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37593 777 17-03-18 01:50:34.194 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:34.234 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 01:50:34.234 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:50:34.234 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:34.244 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:34.244 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 01:50:34.244 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 382 ms. 17-03-18 01:50:34.244 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-18 01:50:34.244 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:34.244 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:34.254 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 01:50:34.383 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:34.383 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:34.383 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:34.383 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:34.383 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:34.383 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:34.383 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:34.383 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:50:34.383 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:34.383 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:50:34.573 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:50:34.573 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:34.573 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37593 150' command took 2 ms to send, 1302 ms to get response, and 1314 ms overall 17-03-18 01:50:34.573 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171556 17-03-18 01:50:34.683 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17156 mm 17-03-18 01:50:34.683 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:34.683 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37476, sync = True, waitForSettling = False) 17-03-18 01:50:34.693 -07 000000512 INF: Z Motor: Moving to -0.171554 mm, started at -0.171306 mm, distance = -0.25 um 17-03-18 01:50:34.693 -07 000000512 INF: FPGA: Xmit ZDACW 37476\n [Z Motor] 17-03-18 01:50:34.693 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-18 01:50:34.693 -07 000000444 INF: Y Motor: Moving to 62.4026 mm, started at 61.5625 mm, delta = 0.8401 mm 17-03-18 01:50:34.703 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:34.763 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 01:50:34.763 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 01:50:34.763 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:34.773 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 01:50:34.773 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 01:50:34.773 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:34.773 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:34.773 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:34.773 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 01:50:34.783 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 01:50:34.783 -07 000000629 INF: FPGA: Recv ZDACW 17-03-18 01:50:34.783 -07 000000629 INF: FPGA: Recv YRDPOS 126080 17-03-18 01:50:34.783 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 77 ms to get response, and 95 ms overall 17-03-18 01:50:34.783 -07 000000444 INF: Y Motor: Encoder = 126080 = motor step 98500.0 = 61.5625 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:34.783 -07 000000444 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:34.783 -07 000000444 INF: Y Motor: Moving 1344 steps-21 17-03-18 01:50:34.783 -07 000000512 INF: FPGA: 'ZDACW 37476' command took 0 ms to send, 86 ms to get response, and 96 ms overall 17-03-18 01:50:34.783 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:34.793 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:34.793 -07 000000592 INF: FPGA: Recv ZDACR 37476 17-03-18 01:50:34.793 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 01:50:34.793 -07 000000512 INF: Z Motor: MoveAbsStepped took 100 ms (did NOT wait for settling yet)) 17-03-18 01:50:35.162 -07 000000592 INF: FPGA: Recv YMVTILE 17-03-18 01:50:35.162 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 380 ms overall 17-03-18 01:50:35.212 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:35.212 -07 000000592 INF: FPGA: Recv YRDPOS 127784 17-03-18 01:50:35.222 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:50:35.222 -07 000000444 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:35.222 -07 000000444 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-18 01:50:35.222 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.840 mm, average velocity = 2.205 mm/sec 17-03-18 01:50:36.170 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:36.170 -07 000000576 INF: FPGA: Recv YRDPOS 127784 17-03-18 01:50:36.180 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:36.180 -07 000000444 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:36.200 -07 000000444 INF: Y Motor: After move to 62.402607, error = -0.008076, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:36.200 -07 000000444 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:36.200 -07 000000444 INF: Y Motor: Moved to 62.3945 after 1515 ms (table move) 17-03-18 01:50:36.200 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171554 mm (DAC = 37476) 17-03-18 01:50:36.200 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.210 -07 000000512 INF: FPGA: Recv ZSGSRD 36001 17-03-18 01:50:36.210 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 01:50:36.210 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.210 -07 000000512 INF: FPGA: Recv ZSGSRD 35989 17-03-18 01:50:36.220 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:36.220 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.220 -07 000000592 INF: FPGA: Recv ZSGSRD 36000 17-03-18 01:50:36.230 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.230 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.230 -07 000000444 INF: FPGA: Recv ZSGSRD 35999 17-03-18 01:50:36.240 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.240 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.240 -07 000000629 INF: FPGA: Recv ZSGSRD 35992 17-03-18 01:50:36.250 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.250 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.250 -07 000000629 INF: FPGA: Recv ZSGSRD 35990 17-03-18 01:50:36.260 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.260 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.260 -07 000000512 INF: FPGA: Recv ZSGSRD 35994 17-03-18 01:50:36.270 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.270 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.270 -07 000000629 INF: FPGA: Recv ZSGSRD 35999 17-03-18 01:50:36.280 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.280 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.280 -07 000000592 INF: FPGA: Recv ZSGSRD 35997 17-03-18 01:50:36.290 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.290 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.290 -07 000000444 INF: FPGA: Recv ZSGSRD 35997 17-03-18 01:50:36.300 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.300 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:36.300 -07 000000592 INF: FPGA: Recv ZPIEZORD 31941 17-03-18 01:50:36.310 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.310 -07 000000610 INF: Z Motor: Piezo is near 48.2 V (nominally 0 to 100 V), expect near 57.2 V, since DAC is at 5.718 V. Piezo Error = -9.0 V. 17-03-18 01:50:36.310 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.6 um, Read 10 ADC samples: Avg = 35996 (-170.7 uncal um), Error = 0.9 uncal um, Median = 35997 (-170.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35989 (-170.6 uncal um), Max = 36001 (-170.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:50:36.310 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35996, posNoise = 5, negNoise = 7 17-03-18 01:50:36.310 -07 000000610 INF: Z Motor: After move to -0.171554, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:36.310 -07 000000610 INF: Z Motor: Settle wait time = 1519 ms, measure time = 101 ms (allowed 150 ms), total time = 1620 ms 17-03-18 01:50:36.310 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:36.360 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1672 ms 17-03-18 01:50:36.360 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:36.360 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39453125, Z-position -0.171569292265962. ---------- 17-03-18 01:50:36.360 -07 000000610 INF: Cycle 92 Tile 4 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:36.360 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37300, sync = True, waitForSettling = True) 17-03-18 01:50:36.360 -07 000000610 INF: Z Motor: Moving to -0.170748 mm, started at -0.171569 mm, distance = 0.82 um 17-03-18 01:50:36.380 -07 000000610 INF: FPGA: Xmit ZDACW 37300\n [Z Motor] 17-03-18 01:50:36.380 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 01:50:36.390 -07 000000610 INF: FPGA: 'ZDACW 37300' command took 0 ms to send, 0 ms to get response, and 23 ms overall 17-03-18 01:50:36.390 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:36.390 -07 000000606 INF: FPGA: Recv ZDACR 37300 17-03-18 01:50:36.400 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.400 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:36.549 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.549 -07 000000576 INF: FPGA: Recv ZSGSRD 35871 17-03-18 01:50:36.559 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:36.559 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.559 -07 000000592 INF: FPGA: Recv ZSGSRD 35868 17-03-18 01:50:36.569 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.569 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.569 -07 000000606 INF: FPGA: Recv ZSGSRD 35866 17-03-18 01:50:36.579 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.579 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.579 -07 000000444 INF: FPGA: Recv ZSGSRD 35868 17-03-18 01:50:36.589 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.589 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.589 -07 000000606 INF: FPGA: Recv ZSGSRD 35876 17-03-18 01:50:36.599 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.599 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.599 -07 000000592 INF: FPGA: Recv ZSGSRD 35867 17-03-18 01:50:36.609 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.609 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.609 -07 000000606 INF: FPGA: Recv ZSGSRD 35875 17-03-18 01:50:36.619 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.619 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.619 -07 000000592 INF: FPGA: Recv ZSGSRD 35870 17-03-18 01:50:36.629 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.629 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.629 -07 000000576 INF: FPGA: Recv ZSGSRD 35870 17-03-18 01:50:36.639 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.639 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:36.639 -07 000000629 INF: FPGA: Recv ZSGSRD 35871 17-03-18 01:50:36.649 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.649 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:36.649 -07 000000444 INF: FPGA: Recv ZPIEZORD 31751 17-03-18 01:50:36.659 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:36.659 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.692 V. Piezo Error = -9.1 V. 17-03-18 01:50:36.659 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.7 um, Read 10 ADC samples: Avg = 35870 (-169.9 uncal um), Error = 0.9 uncal um, Median = 35870 (-169.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35866 (-169.9 uncal um), Max = 35876 (-169.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:50:36.659 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35870, posNoise = 6, negNoise = 4 17-03-18 01:50:36.659 -07 000000610 INF: Z Motor: After move to -0.170748, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:36.659 -07 000000610 INF: Z Motor: MoveAbsStepped took 294 ms) 17-03-18 01:50:36.659 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:36.659 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:36.659 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:36.659 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:36.659 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:36.659 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:36.659 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:36.659 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:36.659 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:36.659 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:36.659 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:36.659 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:36.669 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:36.669 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:36.669 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:50:36.669 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:36.679 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:50:36.679 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:50:36.679 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:50:36.679 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:36.689 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37476 150\n [Camera] 17-03-18 01:50:36.689 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.000345, 17-03-18 01:50:36.889 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:37.098 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:37.098 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:37.278 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:37.278 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:37.278 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:37.278 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:37.278 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:37.278 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:37.278 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:37.278 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:50:37.288 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:37.288 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:50:37.468 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37476 777 17-03-18 01:50:37.617 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:37.677 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 397 ms. 17-03-18 01:50:37.677 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:50:37.677 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:37.677 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 397 ms. 17-03-18 01:50:37.677 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 01:50:37.677 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:37.677 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:37.677 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-18 01:50:37.687 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:37.687 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms. 17-03-18 01:50:37.807 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:37.807 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:37.807 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:37.807 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:37.807 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 01:50:37.807 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:37.807 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:37.807 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:37.807 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:37.807 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 01:50:37.997 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:50:37.997 -07 000000592 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:37.997 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37476 150' command took 2 ms to send, 1305 ms to get response, and 1315 ms overall 17-03-18 01:50:37.997 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.171335 17-03-18 01:50:37.997 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17134 mm 17-03-18 01:50:37.997 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:37.997 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-18 01:50:37.997 -07 000000606 INF: Y Motor: Moving to 63.2326 mm, started at 62.3945 mm, delta = 0.8381 mm 17-03-18 01:50:37.997 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:37.997 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 37428, sync = True, waitForSettling = False) 17-03-18 01:50:37.997 -07 000000591 INF: Z Motor: Moving to -0.171334 mm, started at -0.170760 mm, distance = -0.57 um 17-03-18 01:50:38.007 -07 000000591 INF: FPGA: Xmit ZDACW 37428\n [Z Motor] 17-03-18 01:50:38.007 -07 000000592 INF: FPGA: Recv YRDPOS 127784 17-03-18 01:50:38.007 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 01:50:38.007 -07 000000606 INF: Y Motor: Encoder = 127784 = motor step 99831.3 = 62.3945 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:38.007 -07 000000606 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:38.007 -07 000000606 INF: Y Motor: Moving 1341 steps-17 17-03-18 01:50:38.007 -07 000000430 INF: FPGA: Recv ZDACW 17-03-18 01:50:38.017 -07 000000591 INF: FPGA: 'ZDACW 37428' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:38.017 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:38.027 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:38.027 -07 000000430 INF: FPGA: Recv ZDACR 37428 17-03-18 01:50:38.037 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 01:50:38.037 -07 000000591 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet)) 17-03-18 01:50:38.206 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 404 ms. 17-03-18 01:50:38.206 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:50:38.206 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:38.216 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 404 ms. 17-03-18 01:50:38.216 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms. 17-03-18 01:50:38.216 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:38.216 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:38.216 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms. 17-03-18 01:50:38.216 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:38.226 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 415 ms. 17-03-18 01:50:38.386 -07 000000576 INF: FPGA: Recv YMVTILE 17-03-18 01:50:38.386 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 387 ms overall 17-03-18 01:50:38.436 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:38.436 -07 000000576 INF: FPGA: Recv YRDPOS 129480 17-03-18 01:50:38.446 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:38.446 -07 000000606 INF: Y Motor: Encoder = 129480 = motor step 101156.3 = 63.2227 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:38.446 -07 000000606 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 01:50:38.446 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.838 mm, average velocity = 2.166 mm/sec 17-03-18 01:50:39.394 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:39.394 -07 000000592 INF: FPGA: Recv YRDPOS 129480 17-03-18 01:50:39.404 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:39.404 -07 000000606 INF: Y Motor: Encoder = 129480 = motor step 101156.3 = 63.2227 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:39.424 -07 000000606 INF: Y Motor: After move to 63.232609, error = -0.009953, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:39.424 -07 000000606 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:39.424 -07 000000606 INF: Y Motor: Moved to 63.2227 after 1427 ms (table move) 17-03-18 01:50:39.424 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171334 mm (DAC = 37428) 17-03-18 01:50:39.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.434 -07 000000606 INF: FPGA: Recv ZSGSRD 35961 17-03-18 01:50:39.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 01:50:39.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.434 -07 000000606 INF: FPGA: Recv ZSGSRD 35953 17-03-18 01:50:39.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:39.444 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.444 -07 000000430 INF: FPGA: Recv ZSGSRD 35964 17-03-18 01:50:39.454 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.454 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.454 -07 000000592 INF: FPGA: Recv ZSGSRD 35970 17-03-18 01:50:39.464 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.464 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.464 -07 000000629 INF: FPGA: Recv ZSGSRD 35961 17-03-18 01:50:39.474 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.474 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.474 -07 000000592 INF: FPGA: Recv ZSGSRD 35957 17-03-18 01:50:39.484 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.484 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.484 -07 000000444 INF: FPGA: Recv ZSGSRD 35954 17-03-18 01:50:39.494 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.494 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.494 -07 000000501 INF: FPGA: Recv ZSGSRD 35964 17-03-18 01:50:39.504 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.504 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.504 -07 000000444 INF: FPGA: Recv ZSGSRD 35960 17-03-18 01:50:39.514 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.514 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.514 -07 000000430 INF: FPGA: Recv ZSGSRD 35960 17-03-18 01:50:39.524 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.524 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:39.524 -07 000000592 INF: FPGA: Recv ZPIEZORD 31899 17-03-18 01:50:39.534 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.534 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.711 V. Piezo Error = -9.0 V. 17-03-18 01:50:39.534 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35960 (-170.5 uncal um), Error = 0.9 uncal um, Median = 35960 (-170.5 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35953 (-170.4 uncal um), Max = 35970 (-170.5 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:50:39.534 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35960, posNoise = 10, negNoise = 7 17-03-18 01:50:39.534 -07 000000610 INF: Z Motor: After move to -0.171334, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:39.534 -07 000000610 INF: Z Motor: Settle wait time = 1429 ms, measure time = 101 ms (allowed 150 ms), total time = 1530 ms 17-03-18 01:50:39.534 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:39.584 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms 17-03-18 01:50:39.584 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:39.584 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22265625, Z-position -0.171338020628859. ---------- 17-03-18 01:50:39.584 -07 000000610 INF: Cycle 92 Tile 5 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:39.584 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37251, sync = True, waitForSettling = True) 17-03-18 01:50:39.584 -07 000000610 INF: Z Motor: Moving to -0.170524 mm, started at -0.171338 mm, distance = 0.81 um 17-03-18 01:50:39.584 -07 000000610 INF: FPGA: Xmit ZDACW 37251\n [Z Motor] 17-03-18 01:50:39.584 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:50:39.594 -07 000000610 INF: FPGA: 'ZDACW 37251' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:50:39.594 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:39.594 -07 000000501 INF: FPGA: Recv ZDACR 37251 17-03-18 01:50:39.604 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.604 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:39.753 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.753 -07 000000592 INF: FPGA: Recv ZSGSRD 35837 17-03-18 01:50:39.763 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:39.763 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.763 -07 000000501 INF: FPGA: Recv ZSGSRD 35838 17-03-18 01:50:39.773 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.773 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.773 -07 000000444 INF: FPGA: Recv ZSGSRD 35836 17-03-18 01:50:39.783 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.783 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.783 -07 000000430 INF: FPGA: Recv ZSGSRD 35835 17-03-18 01:50:39.793 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.793 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.793 -07 000000629 INF: FPGA: Recv ZSGSRD 35833 17-03-18 01:50:39.803 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.803 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.803 -07 000000501 INF: FPGA: Recv ZSGSRD 35833 17-03-18 01:50:39.813 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.813 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.813 -07 000000512 INF: FPGA: Recv ZSGSRD 35838 17-03-18 01:50:39.823 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.823 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.823 -07 000000501 INF: FPGA: Recv ZSGSRD 35837 17-03-18 01:50:39.833 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.833 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.833 -07 000000629 INF: FPGA: Recv ZSGSRD 35838 17-03-18 01:50:39.843 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:39.843 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:39.843 -07 000000512 INF: FPGA: Recv ZSGSRD 35833 17-03-18 01:50:39.853 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.853 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:39.853 -07 000000444 INF: FPGA: Recv ZPIEZORD 31735 17-03-18 01:50:39.863 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:39.863 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.684 V. Piezo Error = -9.0 V. 17-03-18 01:50:39.863 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35836 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35836 (-169.7 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 35833 (-169.6 uncal um), Max = 35838 (-169.7 uncal um), Pos Noise = 2 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 01:50:39.863 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35836, posNoise = 2, negNoise = 3 17-03-18 01:50:39.863 -07 000000610 INF: Z Motor: After move to -0.170524, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:39.863 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 01:50:39.863 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:39.863 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:39.863 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:39.863 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:39.863 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:39.863 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:39.863 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:39.863 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:39.863 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:39.863 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:39.863 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:39.863 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:39.873 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:39.873 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:39.873 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:50:39.873 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:39.883 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:50:39.883 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:39.883 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:50:39.883 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:39.893 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37428 150\n [Camera] 17-03-18 01:50:40.083 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:40.482 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:40.482 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:40.482 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:40.482 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:40.482 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 01:50:40.482 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:40.482 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:40.482 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:40.482 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:40.482 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 01:50:40.672 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37428 777 17-03-18 01:50:40.821 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:40.861 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 01:50:40.861 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 01:50:40.861 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:40.861 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 01:50:40.861 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 01:50:40.861 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:40.861 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:40.861 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:50:40.861 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:40.871 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 01:50:41.011 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:41.011 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:41.011 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:41.011 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:41.011 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 01:50:41.011 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:41.011 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:41.011 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:41.011 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:41.011 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 01:50:41.201 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:50:41.201 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:41.201 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37428 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:50:41.201 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.171036 17-03-18 01:50:41.201 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17104 mm 17-03-18 01:50:41.201 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:41.211 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-18 01:50:41.211 -07 000000512 INF: Y Motor: Moving to 64.0626 mm, started at 63.2227 mm, delta = 0.8400 mm 17-03-18 01:50:41.211 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:41.211 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 37363, sync = True, waitForSettling = False) 17-03-18 01:50:41.211 -07 000000430 INF: Z Motor: Moving to -0.171037 mm, started at -0.170541 mm, distance = -0.50 um 17-03-18 01:50:41.211 -07 000000447 INF: FPGA: Recv YRDPOS 129481 17-03-18 01:50:41.221 -07 000000430 INF: FPGA: Xmit ZDACW 37363\n [Z Motor] 17-03-18 01:50:41.221 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:41.221 -07 000000512 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:41.221 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 01:50:41.221 -07 000000512 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:41.221 -07 000000512 INF: Y Motor: Moving 1343 steps-20 17-03-18 01:50:41.231 -07 000000430 INF: FPGA: 'ZDACW 37363' command took 0 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 01:50:41.231 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:41.231 -07 000000424 INF: FPGA: Recv ZDACR 37363 17-03-18 01:50:41.241 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:41.241 -07 000000430 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet)) 17-03-18 01:50:41.241 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:41.390 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 01:50:41.390 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:50:41.390 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:41.390 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 01:50:41.390 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 01:50:41.390 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:41.390 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:41.390 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 01:50:41.400 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:41.400 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:50:41.610 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 01:50:41.610 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall 17-03-18 01:50:41.660 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:41.660 -07 000000629 INF: FPGA: Recv YRDPOS 131186 17-03-18 01:50:41.670 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:41.670 -07 000000512 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:41.670 -07 000000512 INF: Y Motor: Position error before settling (table move) = -14 encoder counts (-0.007 mm) 17-03-18 01:50:41.670 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.840 mm, average velocity = 2.126 mm/sec 17-03-18 01:50:42.059 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.983999, 17-03-18 01:50:42.089 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:42.089 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:42.618 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:42.618 -07 000000447 INF: FPGA: Recv YRDPOS 131186 17-03-18 01:50:42.628 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:42.628 -07 000000512 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:42.648 -07 000000512 INF: Y Motor: After move to 64.062607, error = -0.006943, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:42.648 -07 000000512 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:42.648 -07 000000512 INF: Y Motor: Moved to 64.0557 after 1445 ms (table move) 17-03-18 01:50:42.648 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171037 mm (DAC = 37363) 17-03-18 01:50:42.648 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.658 -07 000000424 INF: FPGA: Recv ZSGSRD 35913 17-03-18 01:50:42.658 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 01:50:42.658 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.658 -07 000000430 INF: FPGA: Recv ZSGSRD 35913 17-03-18 01:50:42.668 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:42.668 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.668 -07 000000501 INF: FPGA: Recv ZSGSRD 35925 17-03-18 01:50:42.678 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.678 -07 000000592 INF: FPGA: Recv ZSGSRD 35916 17-03-18 01:50:42.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.688 -07 000000424 INF: FPGA: Recv ZSGSRD 35913 17-03-18 01:50:42.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.698 -07 000000512 INF: FPGA: Recv ZSGSRD 35919 17-03-18 01:50:42.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.708 -07 000000444 INF: FPGA: Recv ZSGSRD 35910 17-03-18 01:50:42.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.718 -07 000000424 INF: FPGA: Recv ZSGSRD 35916 17-03-18 01:50:42.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.728 -07 000000447 INF: FPGA: Recv ZSGSRD 35912 17-03-18 01:50:42.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.738 -07 000000592 INF: FPGA: Recv ZSGSRD 35917 17-03-18 01:50:42.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.748 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:42.748 -07 000000629 INF: FPGA: Recv ZPIEZORD 31866 17-03-18 01:50:42.758 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.758 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.701 V. Piezo Error = -8.9 V. 17-03-18 01:50:42.758 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35915 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35914 (-170.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35910 (-170.1 uncal um), Max = 35925 (-170.2 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:50:42.758 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35915, posNoise = 10, negNoise = 5 17-03-18 01:50:42.758 -07 000000610 INF: Z Motor: After move to -0.171037, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:42.758 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 101 ms (allowed 150 ms), total time = 1548 ms 17-03-18 01:50:42.758 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:42.808 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms 17-03-18 01:50:42.808 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:42.808 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.0556640625, Z-position -0.17104893108248. ---------- 17-03-18 01:50:42.808 -07 000000610 INF: Cycle 92 Tile 6 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:42.808 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37186, sync = True, waitForSettling = True) 17-03-18 01:50:42.808 -07 000000610 INF: Z Motor: Moving to -0.170227 mm, started at -0.171049 mm, distance = 0.82 um 17-03-18 01:50:42.808 -07 000000610 INF: FPGA: Xmit ZDACW 37186\n [Z Motor] 17-03-18 01:50:42.808 -07 000000430 INF: FPGA: Recv ZDACW 17-03-18 01:50:42.818 -07 000000610 INF: FPGA: 'ZDACW 37186' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:50:42.818 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:42.818 -07 000000424 INF: FPGA: Recv ZDACR 37186 17-03-18 01:50:42.828 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.828 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:42.977 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.977 -07 000000579 INF: FPGA: Recv ZSGSRD 35791 17-03-18 01:50:42.987 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:42.987 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.987 -07 000000444 INF: FPGA: Recv ZSGSRD 35790 17-03-18 01:50:42.997 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:42.997 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:42.997 -07 000000579 INF: FPGA: Recv ZSGSRD 35795 17-03-18 01:50:43.007 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.007 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.007 -07 000000447 INF: FPGA: Recv ZSGSRD 35786 17-03-18 01:50:43.017 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.017 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.017 -07 000000512 INF: FPGA: Recv ZSGSRD 35786 17-03-18 01:50:43.027 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.027 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.027 -07 000000444 INF: FPGA: Recv ZSGSRD 35790 17-03-18 01:50:43.037 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.037 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.037 -07 000000424 INF: FPGA: Recv ZSGSRD 35789 17-03-18 01:50:43.047 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.047 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.047 -07 000000592 INF: FPGA: Recv ZSGSRD 35793 17-03-18 01:50:43.057 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.057 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.057 -07 000000512 INF: FPGA: Recv ZSGSRD 35787 17-03-18 01:50:43.067 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.067 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:43.067 -07 000000501 INF: FPGA: Recv ZSGSRD 35793 17-03-18 01:50:43.077 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.077 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:43.077 -07 000000579 INF: FPGA: Recv ZPIEZORD 31683 17-03-18 01:50:43.087 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:43.087 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.674 V. Piezo Error = -9.1 V. 17-03-18 01:50:43.087 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35790 (-169.4 uncal um), Error = 0.9 uncal um, Median = 35790 (-169.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35786 (-169.3 uncal um), Max = 35795 (-169.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:50:43.087 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35790, posNoise = 5, negNoise = 4 17-03-18 01:50:43.087 -07 000000610 INF: Z Motor: After move to -0.170227, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:43.087 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 01:50:43.087 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:43.087 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:43.087 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:43.087 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:43.087 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:43.087 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:43.087 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:50:43.087 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:43.087 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:43.087 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:43.087 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:43.087 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:43.097 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:43.097 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:43.097 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:50:43.097 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:43.107 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:50:43.107 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:43.107 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 01:50:43.107 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:50:43.117 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37363 150\n [Camera] 17-03-18 01:50:43.317 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:43.706 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:43.706 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:43.706 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:43.706 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:43.706 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 01:50:43.706 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:43.706 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:43.706 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:43.706 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:43.706 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 01:50:43.896 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37363 777 17-03-18 01:50:44.045 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:44.105 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 01:50:44.105 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 01:50:44.105 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:44.105 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 401 ms. 17-03-18 01:50:44.105 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:50:44.105 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:44.105 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:44.105 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:50:44.115 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:44.115 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-18 01:50:44.235 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:44.235 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:44.235 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:44.235 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:44.235 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 01:50:44.235 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:44.235 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:44.245 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:44.245 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:44.245 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 01:50:44.425 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:50:44.425 -07 000000430 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:44.425 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37363 150' command took 2 ms to send, 1306 ms to get response, and 1315 ms overall 17-03-18 01:50:44.425 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 01:50:44.425 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.0556640625, Z-Position -0.17024590456476. ------ 17-03-18 01:50:44.435 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:44.435 -07 000000430 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17679 mm 17-03-18 01:50:44.435 -07 000000430 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:44.435 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-18 01:50:44.435 -07 000000501 INF: Y Motor: Moving to 64.8926 mm, started at 64.0557 mm, delta = 0.8369 mm 17-03-18 01:50:44.435 -07 000000447 INF: Z Motor: Entering MoveAbsStepped (DAC = 38620, sync = True, waitForSettling = False) 17-03-18 01:50:44.435 -07 000000447 INF: Z Motor: Moving to -0.176791 mm, started at -0.170246 mm, distance = -6.55 um 17-03-18 01:50:44.445 -07 000000447 INF: FPGA: Xmit ZDACW 38620\n [Z Motor] 17-03-18 01:50:44.455 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:44.614 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 01:50:44.614 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 01:50:44.614 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:44.614 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 01:50:44.614 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 01:50:44.614 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:44.614 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:44.614 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:44.614 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 01:50:44.624 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 01:50:44.634 -07 000000592 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:44.634 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:50:44.634 -07 000000592 INF: FPGA: Recv YRDPOS 131186 17-03-18 01:50:44.634 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 170 ms to get response, and 196 ms overall 17-03-18 01:50:44.634 -07 000000501 INF: Y Motor: Encoder = 131186 = motor step 102489.1 = 64.0557 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:44.634 -07 000000501 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:44.634 -07 000000501 INF: Y Motor: Moving 1339 steps-14 17-03-18 01:50:44.634 -07 000000447 INF: FPGA: 'ZDACW 38620' command took 0 ms to send, 180 ms to get response, and 195 ms overall 17-03-18 01:50:44.634 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 190 ms to get response, and 199 ms overall 17-03-18 01:50:44.634 -07 000000447 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:44.634 -07 000000592 INF: FPGA: Recv ZDACR 38620 17-03-18 01:50:44.644 -07 000000447 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:44.644 -07 000000447 INF: Z Motor: MoveAbsStepped took 205 ms (did NOT wait for settling yet)) 17-03-18 01:50:44.644 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:50:44.654 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:44.844 -07 000000447 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:50:44.844 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 211 ms overall 17-03-18 01:50:45.023 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 01:50:45.023 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall 17-03-18 01:50:45.073 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:45.083 -07 000000424 INF: FPGA: Recv YRDPOS 132870 17-03-18 01:50:45.083 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:50:45.083 -07 000000501 INF: Y Motor: Encoder = 132870 = motor step 103804.7 = 64.8779 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:45.083 -07 000000501 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 01:50:45.083 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.837 mm, average velocity = 2.108 mm/sec 17-03-18 01:50:46.032 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:46.032 -07 000000447 INF: FPGA: Recv YRDPOS 132870 17-03-18 01:50:46.042 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.042 -07 000000501 INF: Y Motor: Encoder = 132870 = motor step 103804.7 = 64.8779 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:46.062 -07 000000501 INF: Y Motor: After move to 64.892609, error = -0.014679, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:46.062 -07 000000501 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:46.062 -07 000000501 INF: Y Motor: Moved to 64.8779 after 1632 ms (table move) 17-03-18 01:50:46.072 -07 000000430 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176791 mm (DAC = 38620) 17-03-18 01:50:46.072 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.072 -07 000000501 INF: FPGA: Recv ZSGSRD 36804 17-03-18 01:50:46.082 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.082 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.082 -07 000000501 INF: FPGA: Recv ZSGSRD 36816 17-03-18 01:50:46.091 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.091 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.091 -07 000000424 INF: FPGA: Recv ZSGSRD 36813 17-03-18 01:50:46.101 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.101 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.101 -07 000000424 INF: FPGA: Recv ZSGSRD 36811 17-03-18 01:50:46.111 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.111 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.111 -07 000000501 INF: FPGA: Recv ZSGSRD 36820 17-03-18 01:50:46.121 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.121 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.121 -07 000000592 INF: FPGA: Recv ZSGSRD 36805 17-03-18 01:50:46.131 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.131 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.131 -07 000000501 INF: FPGA: Recv ZSGSRD 36804 17-03-18 01:50:46.141 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.141 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.141 -07 000000592 INF: FPGA: Recv ZSGSRD 36807 17-03-18 01:50:46.151 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.151 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.151 -07 000000424 INF: FPGA: Recv ZSGSRD 36811 17-03-18 01:50:46.161 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.161 -07 000000430 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:46.161 -07 000000424 INF: FPGA: Recv ZSGSRD 36816 17-03-18 01:50:46.171 -07 000000430 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.171 -07 000000430 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:46.171 -07 000000447 INF: FPGA: Recv ZPIEZORD 33032 17-03-18 01:50:46.181 -07 000000430 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.181 -07 000000430 INF: Z Motor: Piezo is near 50.6 V (nominally 0 to 100 V), expect near 58.9 V, since DAC is at 5.893 V. Piezo Error = -8.4 V. 17-03-18 01:50:46.181 -07 000000430 INF: Z Motor: ReadAdcAverage: Commanded Z = -176.8 um, Read 10 ADC samples: Avg = 36811 (-175.9 uncal um), Error = 0.9 uncal um, Median = 36811 (-175.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 36804 (-175.9 uncal um), Max = 36820 (-176.0 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:50:46.181 -07 000000430 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36811, posNoise = 9, negNoise = 7 17-03-18 01:50:46.181 -07 000000430 INF: Z Motor: After move to -0.176791, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:46.181 -07 000000430 INF: Z Motor: Settle wait time = 1636 ms, measure time = 110 ms (allowed 150 ms), total time = 1746 ms 17-03-18 01:50:46.181 -07 000000430 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:46.221 -07 000000430 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1789 ms 17-03-18 01:50:46.221 -07 000000430 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:46.221 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:46.221 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:46.221 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:46.221 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:46.221 -07 000000430 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:50:46.221 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:46.221 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:46.221 -07 000000430 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:50:46.231 -07 000000430 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:50:46.231 -07 000000430 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:50:46.241 -07 000000430 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-18 01:50:46.241 -07 000000430 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms. 17-03-18 01:50:46.241 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:50:46.291 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:50:46.581 -07 000000501 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:50:46.581 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:50:46.591 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:50:46.591 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start. 17-03-18 01:50:46.620 -07 000000626 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:50:46.620 -07 000000430 INF: FPGA: Recv CAMSNAP 17-03-18 01:50:46.620 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 379 ms to get response, and 384 ms overall 17-03-18 01:50:46.710 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 01:50:46.710 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:46.720 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:50:46.720 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 01:50:46.730 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:46.730 -07 000000592 INF: Autofocus start 17-03-18 01:50:46.730 -07 000000592 INF: MeasureProfile start 17-03-18 01:50:46.740 -07 000000626 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:46.740 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:46.740 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:50:46.740 -07 000000592 INF: MeasureProfile done 17-03-18 01:50:46.740 -07 000000592 INF: X=0 Z correction [um]=-0.0713522 17-03-18 01:50:46.740 -07 000000592 INF: Autofocus finished 17-03-18 01:50:46.940 -07 000000579 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:50:46.940 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:50:46.940 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.8779296875, Z-position -0.176805025161498. ---------- 17-03-18 01:50:46.950 -07 000000610 INF: Cycle 92 Tile 7 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:46.950 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37117, sync = True, waitForSettling = True) 17-03-18 01:50:46.950 -07 000000610 INF: Z Motor: Moving to -0.169911 mm, started at -0.176805 mm, distance = 6.89 um 17-03-18 01:50:46.950 -07 000000610 INF: FPGA: Xmit ZDACW 37117\n [Z Motor] 17-03-18 01:50:46.950 -07 000000424 INF: FPGA: Recv ZDACW 17-03-18 01:50:46.960 -07 000000610 INF: FPGA: 'ZDACW 37117' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:46.960 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:46.960 -07 000000592 INF: FPGA: Recv ZDACR 37117 17-03-18 01:50:46.970 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:46.970 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:47.080 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:47.080 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:47.120 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.120 -07 000000424 INF: FPGA: Recv ZSGSRD 35742 17-03-18 01:50:47.130 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:47.149 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.149 -07 000000501 INF: FPGA: Recv ZSGSRD 35739 17-03-18 01:50:47.159 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:50:47.159 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.159 -07 000000447 INF: FPGA: Recv ZSGSRD 35739 17-03-18 01:50:47.169 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.179 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.179 -07 000000501 INF: FPGA: Recv ZSGSRD 35741 17-03-18 01:50:47.189 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:50:47.189 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.189 -07 000000424 INF: FPGA: Recv ZSGSRD 35743 17-03-18 01:50:47.199 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.199 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.199 -07 000000626 INF: FPGA: Recv ZSGSRD 35740 17-03-18 01:50:47.209 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.209 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.209 -07 000000561 INF: FPGA: Recv ZSGSRD 35740 17-03-18 01:50:47.219 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.219 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.219 -07 000000430 INF: FPGA: Recv ZSGSRD 35736 17-03-18 01:50:47.229 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.229 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.229 -07 000000592 INF: FPGA: Recv ZSGSRD 35741 17-03-18 01:50:47.239 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.239 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:47.239 -07 000000592 INF: FPGA: Recv ZSGSRD 35740 17-03-18 01:50:47.249 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.249 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:47.249 -07 000000561 INF: FPGA: Recv ZPIEZORD 31592 17-03-18 01:50:47.259 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:47.259 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.664 V. Piezo Error = -9.1 V. 17-03-18 01:50:47.259 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35740 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35740 (-169.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35736 (-169.0 uncal um), Max = 35743 (-169.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:50:47.259 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35740, posNoise = 3, negNoise = 4 17-03-18 01:50:47.259 -07 000000610 INF: Z Motor: After move to -0.169911, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:47.259 -07 000000610 INF: Z Motor: MoveAbsStepped took 309 ms) 17-03-18 01:50:47.259 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:47.259 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:47.259 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:47.259 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:47.259 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:47.259 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:47.259 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:47.259 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:47.259 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:47.259 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:47.259 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:47.259 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:47.269 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:47.269 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:47.269 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:50:47.269 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:47.279 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:50:47.279 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:47.279 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:50:47.279 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:47.279 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37294 150\n [Camera] 17-03-18 01:50:47.429 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.974486, 17-03-18 01:50:47.479 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:47.878 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:47.878 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:47.878 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:47.878 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:47.878 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 01:50:47.878 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:47.878 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:47.878 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:47.878 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:47.878 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 01:50:48.068 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37294 777 17-03-18 01:50:48.217 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:48.247 -07 000000592 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 01:50:48.247 -07 000000592 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms. 17-03-18 01:50:48.247 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:48.247 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 01:50:48.247 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 01:50:48.247 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:48.257 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:50:48.257 -07 000000592 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:50:48.257 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:50:48.267 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 01:50:48.407 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:48.407 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:48.407 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:48.407 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:48.407 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-18 01:50:48.407 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:48.407 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:48.407 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:48.407 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:48.407 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-18 01:50:48.597 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:50:48.597 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:48.597 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37294 150' command took 2 ms to send, 1303 ms to get response, and 1314 ms overall 17-03-18 01:50:48.597 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.170531 17-03-18 01:50:48.597 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.17053 mm 17-03-18 01:50:48.597 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:48.597 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-18 01:50:48.597 -07 000000501 INF: Y Motor: Moving to 65.7226 mm, started at 64.8779 mm, delta = 0.8447 mm 17-03-18 01:50:48.597 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:48.597 -07 000000487 INF: Z Motor: Entering MoveAbsStepped (DAC = 37252, sync = True, waitForSettling = False) 17-03-18 01:50:48.607 -07 000000487 INF: Z Motor: Moving to -0.170529 mm, started at -0.169925 mm, distance = -0.60 um 17-03-18 01:50:48.607 -07 000000606 INF: FPGA: Recv YRDPOS 132870 17-03-18 01:50:48.617 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:48.617 -07 000000487 INF: FPGA: Xmit ZDACW 37252\n [Z Motor] 17-03-18 01:50:48.617 -07 000000501 INF: Y Motor: Encoder = 132870 = motor step 103804.7 = 64.8779 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:48.617 -07 000000501 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:48.617 -07 000000501 INF: Y Motor: Moving 1351 steps-30 17-03-18 01:50:48.617 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 01:50:48.627 -07 000000487 INF: FPGA: 'ZDACW 37252' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:50:48.627 -07 000000487 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:48.627 -07 000000591 INF: FPGA: Recv ZDACR 37252 17-03-18 01:50:48.637 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:48.637 -07 000000487 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:48.637 -07 000000487 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet)) 17-03-18 01:50:48.806 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 399 ms. 17-03-18 01:50:48.806 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 01:50:48.806 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:48.806 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 397 ms. 17-03-18 01:50:48.806 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms. 17-03-18 01:50:48.806 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:48.806 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:50:48.806 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 01:50:48.816 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-18 01:50:48.816 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 408 ms. 17-03-18 01:50:49.006 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 01:50:49.006 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:50:49.056 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:49.056 -07 000000592 INF: FPGA: Recv YRDPOS 134580 17-03-18 01:50:49.066 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:49.066 -07 000000501 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:49.066 -07 000000501 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 01:50:49.066 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.845 mm, average velocity = 2.128 mm/sec 17-03-18 01:50:50.014 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:50.014 -07 000000430 INF: FPGA: Recv YRDPOS 134580 17-03-18 01:50:50.024 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:50.024 -07 000000501 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:50.054 -07 000000501 INF: Y Motor: After move to 65.722610, error = -0.009720, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:50.054 -07 000000501 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:50.054 -07 000000501 INF: Y Motor: Moved to 65.7129 after 1455 ms (table move) 17-03-18 01:50:50.054 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170529 mm (DAC = 37252) 17-03-18 01:50:50.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.064 -07 000000430 INF: FPGA: Recv ZSGSRD 35831 17-03-18 01:50:50.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 01:50:50.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.064 -07 000000501 INF: FPGA: Recv ZSGSRD 35843 17-03-18 01:50:50.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.074 -07 000000606 INF: FPGA: Recv ZSGSRD 35836 17-03-18 01:50:50.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.084 -07 000000447 INF: FPGA: Recv ZSGSRD 35837 17-03-18 01:50:50.094 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.094 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.094 -07 000000480 INF: FPGA: Recv ZSGSRD 35829 17-03-18 01:50:50.104 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.104 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.104 -07 000000592 INF: FPGA: Recv ZSGSRD 35835 17-03-18 01:50:50.114 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.114 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.114 -07 000000447 INF: FPGA: Recv ZSGSRD 35838 17-03-18 01:50:50.124 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.124 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.124 -07 000000430 INF: FPGA: Recv ZSGSRD 35832 17-03-18 01:50:50.134 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.134 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.134 -07 000000501 INF: FPGA: Recv ZSGSRD 35840 17-03-18 01:50:50.144 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.144 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.144 -07 000000592 INF: FPGA: Recv ZSGSRD 35843 17-03-18 01:50:50.154 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.154 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:50.154 -07 000000447 INF: FPGA: Recv ZPIEZORD 31751 17-03-18 01:50:50.164 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.164 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.684 V. Piezo Error = -9.0 V. 17-03-18 01:50:50.164 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35836 (-169.7 uncal um), Error = 0.9 uncal um, Median = 35836 (-169.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35829 (-169.6 uncal um), Max = 35843 (-169.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:50:50.164 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35836, posNoise = 7, negNoise = 7 17-03-18 01:50:50.164 -07 000000610 INF: Z Motor: After move to -0.170529, error = -0.000013, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:50.164 -07 000000610 INF: Z Motor: Settle wait time = 1457 ms, measure time = 103 ms (allowed 150 ms), total time = 1560 ms 17-03-18 01:50:50.164 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:50.214 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1614 ms 17-03-18 01:50:50.214 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:50.214 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.712890625, Z-position -0.170541418323281. ---------- 17-03-18 01:50:50.214 -07 000000610 INF: Cycle 92 Tile 8 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:50.214 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37076, sync = True, waitForSettling = True) 17-03-18 01:50:50.214 -07 000000610 INF: Z Motor: Moving to -0.169723 mm, started at -0.170541 mm, distance = 0.82 um 17-03-18 01:50:50.214 -07 000000610 INF: FPGA: Xmit ZDACW 37076\n [Z Motor] 17-03-18 01:50:50.214 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:50:50.224 -07 000000610 INF: FPGA: 'ZDACW 37076' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:50:50.224 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:50.224 -07 000000480 INF: FPGA: Recv ZDACR 37076 17-03-18 01:50:50.234 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.234 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:50.383 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.383 -07 000000447 INF: FPGA: Recv ZSGSRD 35713 17-03-18 01:50:50.393 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.393 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.393 -07 000000480 INF: FPGA: Recv ZSGSRD 35713 17-03-18 01:50:50.403 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.403 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.403 -07 000000447 INF: FPGA: Recv ZSGSRD 35711 17-03-18 01:50:50.413 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.413 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.413 -07 000000606 INF: FPGA: Recv ZSGSRD 35704 17-03-18 01:50:50.423 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.423 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.423 -07 000000501 INF: FPGA: Recv ZSGSRD 35705 17-03-18 01:50:50.433 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.433 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.433 -07 000000430 INF: FPGA: Recv ZSGSRD 35712 17-03-18 01:50:50.443 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.443 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.443 -07 000000501 INF: FPGA: Recv ZSGSRD 35712 17-03-18 01:50:50.453 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.453 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.453 -07 000000430 INF: FPGA: Recv ZSGSRD 35709 17-03-18 01:50:50.463 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.463 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.463 -07 000000447 INF: FPGA: Recv ZSGSRD 35713 17-03-18 01:50:50.473 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.473 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:50.473 -07 000000480 INF: FPGA: Recv ZSGSRD 35711 17-03-18 01:50:50.483 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.483 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:50.483 -07 000000447 INF: FPGA: Recv ZPIEZORD 31597 17-03-18 01:50:50.493 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:50.493 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.657 V. Piezo Error = -9.1 V. 17-03-18 01:50:50.493 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35710 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35712 (-168.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35704 (-168.8 uncal um), Max = 35713 (-168.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:50:50.493 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35710, posNoise = 3, negNoise = 6 17-03-18 01:50:50.493 -07 000000610 INF: Z Motor: After move to -0.169723, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:50.493 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 01:50:50.493 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:50.493 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:50.493 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:50.493 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:50.493 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:50.493 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:50.493 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:50.493 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:50.493 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:50.493 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:50.493 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:50.493 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:50.503 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:50.503 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:50.503 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:50:50.503 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:50.513 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 01:50:50.513 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:50:50.513 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 01:50:50.513 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:50:50.513 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37252 150\n [Camera] 17-03-18 01:50:50.713 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:51.102 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:51.102 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:51.102 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:51.102 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:51.102 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start. 17-03-18 01:50:51.102 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:51.102 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:51.102 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:51.102 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:51.102 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start. 17-03-18 01:50:51.292 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37252 777 17-03-18 01:50:51.441 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:51.481 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 01:50:51.481 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 01:50:51.481 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 01:50:51.481 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:51.481 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 01:50:51.481 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:51.491 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:50:51.491 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 01:50:51.491 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:50:51.491 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 01:50:51.631 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:51.631 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:51.631 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:51.631 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:51.631 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start. 17-03-18 01:50:51.631 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:51.631 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:51.631 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:51.631 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:51.641 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start. 17-03-18 01:50:51.821 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:50:51.821 -07 000000430 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:51.821 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37252 150' command took 2 ms to send, 1308 ms to get response, and 1315 ms overall 17-03-18 01:50:51.821 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.170083 17-03-18 01:50:51.831 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17008 mm 17-03-18 01:50:51.831 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:51.831 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-18 01:50:51.831 -07 000000444 INF: Y Motor: Moving to 66.5526 mm, started at 65.7129 mm, delta = 0.8397 mm 17-03-18 01:50:51.831 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:51.831 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 37155, sync = True, waitForSettling = False) 17-03-18 01:50:51.831 -07 000000501 INF: Z Motor: Moving to -0.170085 mm, started at -0.169732 mm, distance = -0.35 um 17-03-18 01:50:51.831 -07 000000447 INF: FPGA: Recv YRDPOS 134580 17-03-18 01:50:51.841 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:50:51.841 -07 000000444 INF: Y Motor: Encoder = 134580 = motor step 105140.6 = 65.7129 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:51.841 -07 000000444 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:51.841 -07 000000444 INF: Y Motor: Moving 1344 steps-20 17-03-18 01:50:51.841 -07 000000501 INF: FPGA: Xmit ZDACW 37155\n [Z Motor] 17-03-18 01:50:51.841 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:50:51.851 -07 000000501 INF: FPGA: 'ZDACW 37155' command took 2 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 01:50:51.851 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:51.851 -07 000000430 INF: FPGA: Recv ZDACR 37155 17-03-18 01:50:51.861 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:51.861 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:51.861 -07 000000501 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet)) 17-03-18 01:50:52.030 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 398 ms. 17-03-18 01:50:52.030 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 01:50:52.030 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:52.030 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 401 ms. 17-03-18 01:50:52.030 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 01:50:52.030 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:52.040 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:52.040 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:52.040 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-18 01:50:52.050 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms. 17-03-18 01:50:52.070 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:52.070 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:52.230 -07 000000606 INF: FPGA: Recv YMVTILE 17-03-18 01:50:52.230 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 367 ms to get response, and 395 ms overall 17-03-18 01:50:52.280 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:52.280 -07 000000480 INF: FPGA: Recv YRDPOS 136269 17-03-18 01:50:52.290 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:52.290 -07 000000444 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:52.290 -07 000000444 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 01:50:52.290 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.840 mm, average velocity = 2.115 mm/sec 17-03-18 01:50:52.799 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.999021, 17-03-18 01:50:53.238 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:53.238 -07 000000629 INF: FPGA: Recv YRDPOS 136269 17-03-18 01:50:53.248 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:53.248 -07 000000444 INF: Y Motor: Encoder = 136269 = motor step 106460.2 = 66.5376 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:53.268 -07 000000444 INF: Y Motor: After move to 66.552605, error = -0.015007, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:53.268 -07 000000444 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:53.268 -07 000000444 INF: Y Motor: Moved to 66.5376 after 1445 ms (table move) 17-03-18 01:50:53.278 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170085 mm (DAC = 37155) 17-03-18 01:50:53.278 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.278 -07 000000629 INF: FPGA: Recv ZSGSRD 35763 17-03-18 01:50:53.288 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:53.288 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.288 -07 000000501 INF: FPGA: Recv ZSGSRD 35773 17-03-18 01:50:53.298 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.298 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.298 -07 000000480 INF: FPGA: Recv ZSGSRD 35773 17-03-18 01:50:53.308 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.308 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.308 -07 000000444 INF: FPGA: Recv ZSGSRD 35763 17-03-18 01:50:53.318 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.318 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.318 -07 000000561 INF: FPGA: Recv ZSGSRD 35767 17-03-18 01:50:53.328 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.328 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.328 -07 000000591 INF: FPGA: Recv ZSGSRD 35759 17-03-18 01:50:53.338 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.338 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.338 -07 000000480 INF: FPGA: Recv ZSGSRD 35761 17-03-18 01:50:53.348 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.348 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.348 -07 000000561 INF: FPGA: Recv ZSGSRD 35762 17-03-18 01:50:53.358 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.358 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.358 -07 000000501 INF: FPGA: Recv ZSGSRD 35768 17-03-18 01:50:53.368 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.368 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.368 -07 000000591 INF: FPGA: Recv ZSGSRD 35774 17-03-18 01:50:53.378 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.378 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:53.378 -07 000000592 INF: FPGA: Recv ZPIEZORD 31690 17-03-18 01:50:53.388 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.388 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.669 V. Piezo Error = -9.0 V. 17-03-18 01:50:53.388 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35766 (-169.2 uncal um), Error = 0.9 uncal um, Median = 35765 (-169.2 uncal um), StdDev = 6 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35759 (-169.2 uncal um), Max = 35774 (-169.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:50:53.388 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35766, posNoise = 8, negNoise = 7 17-03-18 01:50:53.388 -07 000000610 INF: Z Motor: After move to -0.170085, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:53.388 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 109 ms (allowed 150 ms), total time = 1556 ms 17-03-18 01:50:53.388 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:53.438 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms 17-03-18 01:50:53.438 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:53.438 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.53759765625, Z-position -0.170091723473357. ---------- 17-03-18 01:50:53.438 -07 000000610 INF: Cycle 92 Tile 9 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:53.438 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36978, sync = True, waitForSettling = True) 17-03-18 01:50:53.438 -07 000000610 INF: Z Motor: Moving to -0.169274 mm, started at -0.170092 mm, distance = 0.82 um 17-03-18 01:50:53.438 -07 000000610 INF: FPGA: Xmit ZDACW 36978\n [Z Motor] 17-03-18 01:50:53.448 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 01:50:53.448 -07 000000610 INF: FPGA: 'ZDACW 36978' command took 0 ms to send, 3 ms to get response, and 6 ms overall 17-03-18 01:50:53.448 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:53.448 -07 000000480 INF: FPGA: Recv ZDACR 36978 17-03-18 01:50:53.458 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:50:53.458 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:53.607 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.607 -07 000000561 INF: FPGA: Recv ZSGSRD 35648 17-03-18 01:50:53.617 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:53.617 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.617 -07 000000579 INF: FPGA: Recv ZSGSRD 35640 17-03-18 01:50:53.627 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.627 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.627 -07 000000447 INF: FPGA: Recv ZSGSRD 35633 17-03-18 01:50:53.637 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.637 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.637 -07 000000444 INF: FPGA: Recv ZSGSRD 35638 17-03-18 01:50:53.647 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.647 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.647 -07 000000576 INF: FPGA: Recv ZSGSRD 35640 17-03-18 01:50:53.657 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.657 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.657 -07 000000579 INF: FPGA: Recv ZSGSRD 35643 17-03-18 01:50:53.667 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.667 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.667 -07 000000447 INF: FPGA: Recv ZSGSRD 35638 17-03-18 01:50:53.677 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.677 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.677 -07 000000430 INF: FPGA: Recv ZSGSRD 35637 17-03-18 01:50:53.687 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.687 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.687 -07 000000512 INF: FPGA: Recv ZSGSRD 35644 17-03-18 01:50:53.697 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.697 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:53.697 -07 000000447 INF: FPGA: Recv ZSGSRD 35634 17-03-18 01:50:53.707 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.707 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:53.707 -07 000000512 INF: FPGA: Recv ZPIEZORD 31486 17-03-18 01:50:53.717 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:53.717 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.642 V. Piezo Error = -9.2 V. 17-03-18 01:50:53.717 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35640 (-168.4 uncal um), Error = 0.9 uncal um, Median = 35639 (-168.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35633 (-168.4 uncal um), Max = 35648 (-168.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:50:53.717 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35640, posNoise = 8, negNoise = 7 17-03-18 01:50:53.717 -07 000000610 INF: Z Motor: After move to -0.169274, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:53.717 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms) 17-03-18 01:50:53.717 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:53.717 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:53.717 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:53.717 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:53.717 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:53.717 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:53.717 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:53.717 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:53.717 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:50:53.717 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:53.717 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 01:50:53.717 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:53.727 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:50:53.727 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:53.727 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:53.727 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:53.737 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:50:53.737 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:50:53.737 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:50:53.737 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:50:53.737 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37155 150\n [Camera] 17-03-18 01:50:53.937 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:54.336 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:54.336 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:54.336 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:54.336 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:54.336 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start. 17-03-18 01:50:54.336 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:54.336 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:54.336 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:54.336 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:54.336 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start. 17-03-18 01:50:54.526 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37155 778 17-03-18 01:50:54.675 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:54.715 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 01:50:54.715 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 01:50:54.715 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:54.715 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 01:50:54.715 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 01:50:54.715 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:54.715 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:54.725 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:54.725 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 01:50:54.725 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:50:54.865 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:54.865 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:54.865 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:54.865 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:54.865 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start. 17-03-18 01:50:54.865 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:54.865 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:54.865 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:54.865 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:54.865 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start. 17-03-18 01:50:55.055 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:50:55.055 -07 000000629 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:55.055 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37155 150' command took 2 ms to send, 1303 ms to get response, and 1314 ms overall 17-03-18 01:50:55.055 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.170146 17-03-18 01:50:55.055 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.17015 mm 17-03-18 01:50:55.055 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:55.055 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-18 01:50:55.055 -07 000000512 INF: Y Motor: Moving to 67.3826 mm, started at 66.5376 mm, delta = 0.8450 mm 17-03-18 01:50:55.055 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:55.055 -07 000000629 INF: Z Motor: Entering MoveAbsStepped (DAC = 37168, sync = True, waitForSettling = False) 17-03-18 01:50:55.055 -07 000000629 INF: Z Motor: Moving to -0.170144 mm, started at -0.169282 mm, distance = -0.86 um 17-03-18 01:50:55.065 -07 000000629 INF: FPGA: Xmit ZDACW 37168\n [Z Motor] 17-03-18 01:50:55.065 -07 000000626 INF: FPGA: Recv YRDPOS 136270 17-03-18 01:50:55.065 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 01:50:55.065 -07 000000512 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:55.065 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 01:50:55.065 -07 000000512 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:55.065 -07 000000512 INF: Y Motor: Moving 1351 steps-31 17-03-18 01:50:55.075 -07 000000629 INF: FPGA: 'ZDACW 37168' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:55.075 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:55.085 -07 000000629 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:55.085 -07 000000626 INF: FPGA: Recv ZDACR 37168 17-03-18 01:50:55.095 -07 000000629 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:50:55.095 -07 000000629 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet)) 17-03-18 01:50:55.244 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 383 ms. 17-03-18 01:50:55.244 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 01:50:55.244 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:55.244 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 01:50:55.244 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms. 17-03-18 01:50:55.244 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:55.254 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:50:55.254 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 01:50:55.254 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:50:55.264 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 01:50:55.444 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 01:50:55.444 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 382 ms overall 17-03-18 01:50:55.494 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:55.494 -07 000000447 INF: FPGA: Recv YRDPOS 137975 17-03-18 01:50:55.504 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:55.504 -07 000000512 INF: Y Motor: Encoder = 137975 = motor step 107793.0 = 67.3706 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:55.504 -07 000000512 INF: Y Motor: Position error before settling (table move) = -25 encoder counts (-0.012 mm) 17-03-18 01:50:55.504 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 382 ms, distance = 0.845 mm, average velocity = 2.212 mm/sec 17-03-18 01:50:56.452 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:56.452 -07 000000606 INF: FPGA: Recv YRDPOS 137976 17-03-18 01:50:56.462 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:56.462 -07 000000512 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:56.482 -07 000000512 INF: Y Motor: After move to 67.382607, error = -0.011513, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:56.482 -07 000000512 INF: Y Motor: Position error after settling (table move) = -24 encoder counts (-0.012 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:50:56.482 -07 000000512 INF: Y Motor: Moved to 67.3711 after 1428 ms (table move) 17-03-18 01:50:56.492 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170144 mm (DAC = 37168) 17-03-18 01:50:56.492 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.492 -07 000000629 INF: FPGA: Recv ZSGSRD 35779 17-03-18 01:50:56.502 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.502 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.502 -07 000000447 INF: FPGA: Recv ZSGSRD 35782 17-03-18 01:50:56.512 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.512 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.512 -07 000000606 INF: FPGA: Recv ZSGSRD 35784 17-03-18 01:50:56.522 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.522 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.522 -07 000000512 INF: FPGA: Recv ZSGSRD 35778 17-03-18 01:50:56.532 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.532 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.532 -07 000000606 INF: FPGA: Recv ZSGSRD 35774 17-03-18 01:50:56.542 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.542 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.542 -07 000000512 INF: FPGA: Recv ZSGSRD 35774 17-03-18 01:50:56.552 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.552 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.552 -07 000000606 INF: FPGA: Recv ZSGSRD 35777 17-03-18 01:50:56.562 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.562 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.562 -07 000000430 INF: FPGA: Recv ZSGSRD 35778 17-03-18 01:50:56.572 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.572 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.572 -07 000000606 INF: FPGA: Recv ZSGSRD 35775 17-03-18 01:50:56.582 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.582 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.582 -07 000000447 INF: FPGA: Recv ZSGSRD 35782 17-03-18 01:50:56.592 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.592 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:56.592 -07 000000606 INF: FPGA: Recv ZPIEZORD 31659 17-03-18 01:50:56.602 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.602 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.671 V. Piezo Error = -9.1 V. 17-03-18 01:50:56.602 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.1 um, Read 10 ADC samples: Avg = 35778 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35778 (-169.3 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35774 (-169.3 uncal um), Max = 35784 (-169.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:50:56.602 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35778, posNoise = 6, negNoise = 4 17-03-18 01:50:56.602 -07 000000610 INF: Z Motor: After move to -0.170144, error = -0.000025, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:56.602 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 110 ms (allowed 150 ms), total time = 1540 ms 17-03-18 01:50:56.602 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:56.642 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1582 ms 17-03-18 01:50:56.642 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:56.642 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37109375, Z-position -0.170168814019058. ---------- 17-03-18 01:50:56.642 -07 000000610 INF: Cycle 92 Tile 10 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:50:56.642 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36992, sync = True, waitForSettling = True) 17-03-18 01:50:56.642 -07 000000610 INF: Z Motor: Moving to -0.169339 mm, started at -0.170169 mm, distance = 0.83 um 17-03-18 01:50:56.642 -07 000000610 INF: FPGA: Xmit ZDACW 36992\n [Z Motor] 17-03-18 01:50:56.642 -07 000000606 INF: FPGA: Recv ZDACW 17-03-18 01:50:56.652 -07 000000610 INF: FPGA: 'ZDACW 36992' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:50:56.652 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:56.652 -07 000000626 INF: FPGA: Recv ZDACR 36992 17-03-18 01:50:56.662 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.662 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:50:56.811 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.811 -07 000000629 INF: FPGA: Recv ZSGSRD 35652 17-03-18 01:50:56.821 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:56.821 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.821 -07 000000626 INF: FPGA: Recv ZSGSRD 35655 17-03-18 01:50:56.831 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.831 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.831 -07 000000629 INF: FPGA: Recv ZSGSRD 35650 17-03-18 01:50:56.841 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.841 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.841 -07 000000626 INF: FPGA: Recv ZSGSRD 35645 17-03-18 01:50:56.851 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.851 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.851 -07 000000447 INF: FPGA: Recv ZSGSRD 35642 17-03-18 01:50:56.861 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.861 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.861 -07 000000430 INF: FPGA: Recv ZSGSRD 35652 17-03-18 01:50:56.871 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.871 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.871 -07 000000447 INF: FPGA: Recv ZSGSRD 35653 17-03-18 01:50:56.881 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.881 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.881 -07 000000626 INF: FPGA: Recv ZSGSRD 35650 17-03-18 01:50:56.891 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.891 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.891 -07 000000606 INF: FPGA: Recv ZSGSRD 35652 17-03-18 01:50:56.901 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.901 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:56.901 -07 000000629 INF: FPGA: Recv ZSGSRD 35648 17-03-18 01:50:56.911 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.911 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:56.911 -07 000000626 INF: FPGA: Recv ZPIEZORD 31487 17-03-18 01:50:56.921 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:56.921 -07 000000610 INF: Z Motor: Piezo is near 47.3 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.645 V. Piezo Error = -9.2 V. 17-03-18 01:50:56.921 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.3 um, Read 10 ADC samples: Avg = 35650 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35651 (-168.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35642 (-168.4 uncal um), Max = 35655 (-168.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:50:56.921 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35650, posNoise = 5, negNoise = 8 17-03-18 01:50:56.921 -07 000000610 INF: Z Motor: After move to -0.169339, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:56.921 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 01:50:56.921 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:56.921 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:56.921 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:56.921 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:50:56.921 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:50:56.921 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:50:56.921 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:56.921 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:56.921 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:50:56.921 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:50:56.921 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:50:56.921 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:50:56.931 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:50:56.931 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:56.931 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:50:56.931 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:50:56.941 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:50:56.941 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:50:56.941 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:50:56.941 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:50:56.951 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 37168 150\n [Camera] 17-03-18 01:50:57.061 -07 000000487 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:50:57.061 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:50:57.151 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:50:57.540 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:50:57.540 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:50:57.540 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:57.540 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:57.540 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start. 17-03-18 01:50:57.540 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:50:57.550 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:50:57.550 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:57.550 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:57.550 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) start. 17-03-18 01:50:57.730 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37168 777 17-03-18 01:50:57.879 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:50:57.919 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 01:50:57.919 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 01:50:57.919 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:57.919 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 01:50:57.919 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 01:50:57.919 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:57.919 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:57.919 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:50:57.919 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:57.929 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 01:50:58.069 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:50:58.069 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:50:58.069 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:50:58.069 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:50:58.069 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 3122434152, 0x0, 391868352) start. 17-03-18 01:50:58.069 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:50:58.069 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:50:58.069 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:50:58.069 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:50:58.069 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 3157856416, 0x0, 418435064) start. 17-03-18 01:50:58.169 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.003063, 17-03-18 01:50:58.259 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:50:58.259 -07 000000606 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:50:58.259 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 37168 150' command took 2 ms to send, 1305 ms to get response, and 1314 ms overall 17-03-18 01:50:58.259 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 01:50:58.259 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37109375, Z-Position -0.169346514864913. ------ 17-03-18 01:50:58.269 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.17560 mm 17-03-18 01:50:58.269 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:50:58.269 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:50:58.269 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-18 01:50:58.269 -07 000000606 INF: Y Motor: Moving to 68.2126 mm, started at 67.3711 mm, delta = 0.8415 mm 17-03-18 01:50:58.269 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 38359, sync = True, waitForSettling = False) 17-03-18 01:50:58.269 -07 000000626 INF: Z Motor: Moving to -0.175596 mm, started at -0.169347 mm, distance = -6.25 um 17-03-18 01:50:58.269 -07 000000512 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:50:58.279 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:58.279 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:50:58.279 -07 000000424 INF: FPGA: Recv YRDPOS 137976 17-03-18 01:50:58.289 -07 000000626 INF: FPGA: Xmit ZDACW 38359\n [Z Motor] 17-03-18 01:50:58.289 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 01:50:58.289 -07 000000606 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:58.289 -07 000000606 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:50:58.289 -07 000000606 INF: Y Motor: Moving 1346 steps-25 17-03-18 01:50:58.289 -07 000000424 INF: FPGA: Recv ZDACW 17-03-18 01:50:58.299 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:50:58.299 -07 000000626 INF: FPGA: 'ZDACW 38359' command took 0 ms to send, 0 ms to get response, and 23 ms overall 17-03-18 01:50:58.309 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:50:58.319 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:50:58.319 -07 000000512 INF: FPGA: Recv ZDACR 38359 17-03-18 01:50:58.329 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:50:58.329 -07 000000626 INF: Z Motor: MoveAbsStepped took 54 ms (did NOT wait for settling yet)) 17-03-18 01:50:58.448 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 3122434152, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 01:50:58.448 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:50:58.448 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:58.448 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 3157856416, 0x0, 418435064) end. Duration was 378 ms. 17-03-18 01:50:58.448 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-18 01:50:58.448 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:50:58.458 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:58.458 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 01:50:58.458 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:50:58.458 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 01:50:58.498 -07 000000591 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:50:58.498 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall 17-03-18 01:50:58.678 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 01:50:58.678 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:50:58.728 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:58.728 -07 000000576 INF: FPGA: Recv YRDPOS 139682 17-03-18 01:50:58.738 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:50:58.738 -07 000000606 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:58.738 -07 000000606 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-18 01:50:58.738 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.842 mm, average velocity = 2.120 mm/sec 17-03-18 01:50:59.686 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:50:59.686 -07 000000561 INF: FPGA: Recv YRDPOS 139682 17-03-18 01:50:59.696 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:50:59.696 -07 000000606 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:50:59.716 -07 000000606 INF: Y Motor: After move to 68.212608, error = -0.008507, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:50:59.716 -07 000000606 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:50:59.716 -07 000000606 INF: Y Motor: Moved to 68.2041 after 1452 ms (table move) 17-03-18 01:50:59.726 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175596 mm (DAC = 38359) 17-03-18 01:50:59.726 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.726 -07 000000629 INF: FPGA: Recv ZSGSRD 36628 17-03-18 01:50:59.736 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.736 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.736 -07 000000606 INF: FPGA: Recv ZSGSRD 36615 17-03-18 01:50:59.746 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.746 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.746 -07 000000447 INF: FPGA: Recv ZSGSRD 36625 17-03-18 01:50:59.756 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.756 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.756 -07 000000561 INF: FPGA: Recv ZSGSRD 36624 17-03-18 01:50:59.766 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.766 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.766 -07 000000591 INF: FPGA: Recv ZSGSRD 36617 17-03-18 01:50:59.776 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.776 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.776 -07 000000561 INF: FPGA: Recv ZSGSRD 36622 17-03-18 01:50:59.786 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.786 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.786 -07 000000447 INF: FPGA: Recv ZSGSRD 36627 17-03-18 01:50:59.796 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.796 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.796 -07 000000561 INF: FPGA: Recv ZSGSRD 36620 17-03-18 01:50:59.806 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.806 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.806 -07 000000591 INF: FPGA: Recv ZSGSRD 36627 17-03-18 01:50:59.816 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.816 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:50:59.816 -07 000000561 INF: FPGA: Recv ZSGSRD 36628 17-03-18 01:50:59.826 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.826 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:50:59.826 -07 000000447 INF: FPGA: Recv ZPIEZORD 32798 17-03-18 01:50:59.836 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:50:59.836 -07 000000618 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.5 V, since DAC is at 5.853 V. Piezo Error = -8.5 V. 17-03-18 01:50:59.836 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.6 um, Read 10 ADC samples: Avg = 36623 (-174.7 uncal um), Error = 0.9 uncal um, Median = 36624 (-174.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36615 (-174.7 uncal um), Max = 36628 (-174.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:50:59.836 -07 000000618 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36623, posNoise = 5, negNoise = 8 17-03-18 01:50:59.836 -07 000000618 INF: Z Motor: After move to -0.175596, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:50:59.836 -07 000000618 INF: Z Motor: Settle wait time = 1454 ms, measure time = 110 ms (allowed 150 ms), total time = 1564 ms 17-03-18 01:50:59.836 -07 000000618 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 01:50:59.876 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms 17-03-18 01:50:59.876 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:50:59.876 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:50:59.876 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:50:59.876 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:50:59.876 -07 000000606 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:50:59.876 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:50:59.876 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:50:59.876 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:50:59.876 -07 000000606 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:50:59.886 -07 000000606 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 01:50:59.886 -07 000000606 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:50:59.896 -07 000000606 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 01:50:59.896 -07 000000606 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms. 17-03-18 01:50:59.896 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:50:59.946 -07 000000430 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:51:00.245 -07 000000447 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:51:00.245 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:51:00.245 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:51:00.385 -07 000000591 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:51:00.385 -07 000000591 INF: FPGA: Recv CAMSNAP 17-03-18 01:51:00.385 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 489 ms to get response, and 491 ms overall 17-03-18 01:51:00.385 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1182469392, 0x0, 559484976) start. 17-03-18 01:51:00.514 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1182469392, 0x0, 559484976) end. Duration was 123 ms. 17-03-18 01:51:00.514 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:00.514 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:51:00.514 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 270 ms. 17-03-18 01:51:00.584 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:00.584 -07 000000629 INF: Autofocus start 17-03-18 01:51:00.584 -07 000000629 INF: MeasureProfile start 17-03-18 01:51:00.584 -07 000000561 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:00.594 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:00.594 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:51:00.594 -07 000000629 INF: MeasureProfile done 17-03-18 01:51:00.594 -07 000000629 INF: X=-32 Z correction [um]=-0.2344 17-03-18 01:51:00.594 -07 000000629 INF: Autofocus finished 17-03-18 01:51:00.794 -07 000000447 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:51:00.794 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:51:00.794 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.2041015625, Z-position -0.175597273278846. ---------- 17-03-18 01:51:00.804 -07 000000610 INF: Cycle 92 Tile 11 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:00.804 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36820, sync = True, waitForSettling = True) 17-03-18 01:51:00.804 -07 000000610 INF: Z Motor: Moving to -0.168551 mm, started at -0.175597 mm, distance = 7.05 um 17-03-18 01:51:00.804 -07 000000610 INF: FPGA: Xmit ZDACW 36820\n [Z Motor] 17-03-18 01:51:00.804 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 01:51:00.814 -07 000000610 INF: FPGA: 'ZDACW 36820' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:00.814 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:00.814 -07 000000618 INF: FPGA: Recv ZDACR 36820 17-03-18 01:51:00.824 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:00.824 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:00.974 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:00.974 -07 000000430 INF: FPGA: Recv ZSGSRD 35526 17-03-18 01:51:00.984 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:00.984 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:00.984 -07 000000447 INF: FPGA: Recv ZSGSRD 35526 17-03-18 01:51:00.994 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:00.994 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:00.994 -07 000000430 INF: FPGA: Recv ZSGSRD 35530 17-03-18 01:51:01.004 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.004 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.004 -07 000000447 INF: FPGA: Recv ZSGSRD 35529 17-03-18 01:51:01.014 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.014 -07 000000606 INF: FPGA: Recv ZSGSRD 35524 17-03-18 01:51:01.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.024 -07 000000629 INF: FPGA: Recv ZSGSRD 35529 17-03-18 01:51:01.033 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.033 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.033 -07 000000447 INF: FPGA: Recv ZSGSRD 35525 17-03-18 01:51:01.043 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.043 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.043 -07 000000561 INF: FPGA: Recv ZSGSRD 35523 17-03-18 01:51:01.053 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.053 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.053 -07 000000447 INF: FPGA: Recv ZSGSRD 35524 17-03-18 01:51:01.063 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.063 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:01.063 -07 000000430 INF: FPGA: Recv ZSGSRD 35535 17-03-18 01:51:01.073 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.073 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:01.073 -07 000000447 INF: FPGA: Recv ZPIEZORD 31363 17-03-18 01:51:01.083 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:01.083 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.2 V, since DAC is at 5.618 V. Piezo Error = -9.2 V. 17-03-18 01:51:01.083 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.6 um, Read 10 ADC samples: Avg = 35527 (-167.7 uncal um), Error = 0.9 uncal um, Median = 35526 (-167.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35523 (-167.7 uncal um), Max = 35535 (-167.7 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:01.083 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35527, posNoise = 8, negNoise = 4 17-03-18 01:51:01.083 -07 000000610 INF: Z Motor: After move to -0.168551, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:01.083 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 01:51:01.083 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:01.083 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:01.083 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:01.083 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:01.083 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:01.083 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:01.083 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:01.083 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:01.083 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:01.083 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:01.083 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:01.083 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:01.093 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:01.093 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:01.093 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:01.093 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:01.103 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 01:51:01.103 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:51:01.103 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 01:51:01.103 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:51:01.103 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36997 150\n [Camera] 17-03-18 01:51:01.303 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:01.692 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:01.692 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:01.692 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:01.692 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:01.692 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:01.692 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:01.702 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:01.702 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:01.702 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:01.702 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:51:01.882 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36997 777 17-03-18 01:51:02.032 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 928 17-03-18 01:51:02.052 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:02.052 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:02.082 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 01:51:02.082 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 01:51:02.082 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:02.082 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:02.092 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 385 ms. 17-03-18 01:51:02.092 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 01:51:02.092 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:02.092 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:51:02.092 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:02.092 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 01:51:02.221 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:02.221 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:02.221 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:02.221 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:02.221 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:02.221 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:02.221 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:02.221 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:51:02.341 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:02.341 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:02.411 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:02.411 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:02.411 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36997 150' command took 2 ms to send, 1307 ms to get response, and 1314 ms overall 17-03-18 01:51:02.411 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.169073 17-03-18 01:51:02.411 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16907 mm 17-03-18 01:51:02.411 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:02.421 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-18 01:51:02.421 -07 000000591 INF: Y Motor: Moving to 69.0426 mm, started at 68.2041 mm, delta = 0.8385 mm 17-03-18 01:51:02.421 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 36934, sync = True, waitForSettling = False) 17-03-18 01:51:02.421 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:02.421 -07 000000618 INF: Z Motor: Moving to -0.169073 mm, started at -0.168556 mm, distance = -0.52 um 17-03-18 01:51:02.421 -07 000000444 INF: FPGA: Recv YRDPOS 139682 17-03-18 01:51:02.431 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:02.431 -07 000000618 INF: FPGA: Xmit ZDACW 36934\n [Z Motor] 17-03-18 01:51:02.431 -07 000000591 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:02.431 -07 000000591 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:02.431 -07 000000591 INF: Y Motor: Moving 1342 steps-17 17-03-18 01:51:02.431 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 01:51:02.441 -07 000000618 INF: FPGA: 'ZDACW 36934' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 01:51:02.441 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:02.441 -07 000000447 INF: FPGA: Recv ZDACR 36934 17-03-18 01:51:02.451 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:02.451 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:02.451 -07 000000618 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet)) 17-03-18 01:51:02.621 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 01:51:02.621 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:51:02.621 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:02.621 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:02.630 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms. 17-03-18 01:51:02.740 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 396 ms. 17-03-18 01:51:02.740 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:51:02.740 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:02.740 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:02.740 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms. 17-03-18 01:51:02.820 -07 000000444 INF: FPGA: Recv YMVTILE 17-03-18 01:51:02.820 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 367 ms to get response, and 397 ms overall 17-03-18 01:51:02.870 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:02.870 -07 000000618 INF: FPGA: Recv YRDPOS 141365 17-03-18 01:51:02.880 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:02.880 -07 000000591 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:02.880 -07 000000591 INF: Y Motor: Position error before settling (table move) = -34 encoder counts (-0.017 mm) 17-03-18 01:51:02.880 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.112 mm/sec 17-03-18 01:51:03.519 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.996267, 17-03-18 01:51:03.828 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:03.828 -07 000000561 INF: FPGA: Recv YRDPOS 141365 17-03-18 01:51:03.838 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:03.838 -07 000000591 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:03.878 -07 000000591 INF: Y Motor: After move to 69.042610, error = -0.016731, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:03.878 -07 000000591 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:03.878 -07 000000591 INF: Y Motor: Moved to 69.0259 after 1466 ms (table move) 17-03-18 01:51:03.888 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169073 mm (DAC = 36934) 17-03-18 01:51:03.888 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.888 -07 000000447 INF: FPGA: Recv ZSGSRD 35610 17-03-18 01:51:03.898 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:03.898 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.898 -07 000000591 INF: FPGA: Recv ZSGSRD 35606 17-03-18 01:51:03.908 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.908 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.908 -07 000000606 INF: FPGA: Recv ZSGSRD 35608 17-03-18 01:51:03.918 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.918 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.918 -07 000000606 INF: FPGA: Recv ZSGSRD 35602 17-03-18 01:51:03.928 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.928 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.928 -07 000000629 INF: FPGA: Recv ZSGSRD 35610 17-03-18 01:51:03.938 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.938 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.938 -07 000000561 INF: FPGA: Recv ZSGSRD 35608 17-03-18 01:51:03.948 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.948 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.948 -07 000000618 INF: FPGA: Recv ZSGSRD 35610 17-03-18 01:51:03.958 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.958 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.958 -07 000000447 INF: FPGA: Recv ZSGSRD 35611 17-03-18 01:51:03.968 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.968 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.968 -07 000000430 INF: FPGA: Recv ZSGSRD 35611 17-03-18 01:51:03.978 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.978 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:03.978 -07 000000444 INF: FPGA: Recv ZSGSRD 35607 17-03-18 01:51:03.988 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.988 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:03.988 -07 000000629 INF: FPGA: Recv ZPIEZORD 31470 17-03-18 01:51:03.998 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:03.998 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.636 V. Piezo Error = -9.1 V. 17-03-18 01:51:03.998 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35608 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35609 (-168.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35602 (-168.2 uncal um), Max = 35611 (-168.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:51:03.998 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35608, posNoise = 3, negNoise = 6 17-03-18 01:51:03.998 -07 000000610 INF: Z Motor: After move to -0.169073, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:03.998 -07 000000610 INF: Z Motor: Settle wait time = 1470 ms, measure time = 107 ms (allowed 150 ms), total time = 1577 ms 17-03-18 01:51:03.998 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:04.048 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1630 ms 17-03-18 01:51:04.048 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:04.048 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02587890625, Z-position -0.169076697954959. ---------- 17-03-18 01:51:04.048 -07 000000610 INF: Cycle 92 Tile 12 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:04.048 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36757, sync = True, waitForSettling = True) 17-03-18 01:51:04.048 -07 000000610 INF: Z Motor: Moving to -0.168263 mm, started at -0.169077 mm, distance = 0.81 um 17-03-18 01:51:04.048 -07 000000610 INF: FPGA: Xmit ZDACW 36757\n [Z Motor] 17-03-18 01:51:04.048 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 01:51:04.058 -07 000000610 INF: FPGA: 'ZDACW 36757' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:51:04.058 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:04.058 -07 000000618 INF: FPGA: Recv ZDACR 36757 17-03-18 01:51:04.068 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.068 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:04.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.218 -07 000000447 INF: FPGA: Recv ZSGSRD 35486 17-03-18 01:51:04.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:04.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.228 -07 000000606 INF: FPGA: Recv ZSGSRD 35482 17-03-18 01:51:04.237 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.237 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.237 -07 000000444 INF: FPGA: Recv ZSGSRD 35484 17-03-18 01:51:04.247 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.247 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.247 -07 000000606 INF: FPGA: Recv ZSGSRD 35484 17-03-18 01:51:04.257 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.257 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.257 -07 000000561 INF: FPGA: Recv ZSGSRD 35484 17-03-18 01:51:04.267 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.267 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.267 -07 000000618 INF: FPGA: Recv ZSGSRD 35480 17-03-18 01:51:04.277 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.277 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.277 -07 000000447 INF: FPGA: Recv ZSGSRD 35481 17-03-18 01:51:04.287 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.287 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.287 -07 000000618 INF: FPGA: Recv ZSGSRD 35484 17-03-18 01:51:04.297 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.297 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.297 -07 000000629 INF: FPGA: Recv ZSGSRD 35483 17-03-18 01:51:04.307 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.307 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:04.307 -07 000000430 INF: FPGA: Recv ZSGSRD 35482 17-03-18 01:51:04.317 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.317 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:04.317 -07 000000447 INF: FPGA: Recv ZPIEZORD 31309 17-03-18 01:51:04.327 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:04.327 -07 000000610 INF: Z Motor: Piezo is near 46.9 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.609 V. Piezo Error = -9.2 V. 17-03-18 01:51:04.327 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.3 um, Read 10 ADC samples: Avg = 35483 (-167.4 uncal um), Error = 0.9 uncal um, Median = 35484 (-167.4 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35480 (-167.4 uncal um), Max = 35486 (-167.4 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 01:51:04.327 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35483, posNoise = 3, negNoise = 3 17-03-18 01:51:04.327 -07 000000610 INF: Z Motor: After move to -0.168263, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:04.327 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 01:51:04.327 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:04.327 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:04.327 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:04.327 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:04.327 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:04.327 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:04.327 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:04.327 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:04.327 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:51:04.327 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:04.327 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:04.327 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:04.337 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:04.337 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:04.337 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:51:04.337 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:04.347 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 01:51:04.347 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:51:04.347 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:51:04.347 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:51:04.357 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36934 150\n [Camera] 17-03-18 01:51:04.557 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:04.946 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:04.946 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:04.946 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:04.946 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:04.946 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:04.946 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:04.946 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:04.946 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 01:51:04.956 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:04.956 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:51:05.136 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36934 777 17-03-18 01:51:05.286 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:05.335 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 391 ms. 17-03-18 01:51:05.335 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:51:05.335 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:05.345 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 391 ms. 17-03-18 01:51:05.345 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 01:51:05.345 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:05.345 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:05.345 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:05.345 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 01:51:05.355 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:51:05.475 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:05.475 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:05.475 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:05.475 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:05.475 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 01:51:05.475 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:05.475 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:05.475 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:05.475 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:05.475 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 01:51:05.665 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:05.665 -07 000000447 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:05.665 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36934 150' command took 2 ms to send, 1306 ms to get response, and 1315 ms overall 17-03-18 01:51:05.665 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.168772 17-03-18 01:51:05.665 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.16877 mm 17-03-18 01:51:05.665 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:05.675 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-18 01:51:05.675 -07 000000629 INF: Y Motor: Moving to 69.8726 mm, started at 69.0259 mm, delta = 0.8467 mm 17-03-18 01:51:05.675 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:05.675 -07 000000447 INF: FPGA: Recv YRDPOS 141365 17-03-18 01:51:05.675 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 36868, sync = True, waitForSettling = False) 17-03-18 01:51:05.675 -07 000000606 INF: Z Motor: Moving to -0.168771 mm, started at -0.168274 mm, distance = -0.50 um 17-03-18 01:51:05.685 -07 000000629 INF: FPGA: 'YRDPOS' command took 2 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:05.685 -07 000000629 INF: Y Motor: Encoder = 141365 = motor step 110441.4 = 69.0259 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:05.685 -07 000000629 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:05.685 -07 000000629 INF: Y Motor: Moving 1355 steps-34 17-03-18 01:51:05.685 -07 000000606 INF: FPGA: Xmit ZDACW 36868\n [Z Motor] 17-03-18 01:51:05.685 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:51:05.695 -07 000000606 INF: FPGA: 'ZDACW 36868' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 01:51:05.695 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:05.695 -07 000000444 INF: FPGA: Recv ZDACR 36868 17-03-18 01:51:05.705 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:05.705 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:05.705 -07 000000606 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet)) 17-03-18 01:51:05.874 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 401 ms. 17-03-18 01:51:05.874 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 01:51:05.874 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:05.874 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 400 ms. 17-03-18 01:51:05.874 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:51:05.874 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:05.884 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:05.884 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 406 ms. 17-03-18 01:51:05.884 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:05.884 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 01:51:06.084 -07 000000444 INF: FPGA: Recv YMVTILE 17-03-18 01:51:06.084 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 400 ms overall 17-03-18 01:51:06.124 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:06.124 -07 000000444 INF: FPGA: Recv YRDPOS 143077 17-03-18 01:51:06.134 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:51:06.134 -07 000000629 INF: Y Motor: Encoder = 143077 = motor step 111778.9 = 69.8618 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:06.134 -07 000000629 INF: Y Motor: Position error before settling (table move) = -22 encoder counts (-0.011 mm) 17-03-18 01:51:06.134 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.847 mm, average velocity = 2.117 mm/sec 17-03-18 01:51:07.042 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:07.042 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:07.082 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:07.082 -07 000000606 INF: FPGA: Recv YRDPOS 143078 17-03-18 01:51:07.092 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:07.092 -07 000000629 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:07.112 -07 000000629 INF: Y Motor: After move to 69.872612, error = -0.010307, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:07.112 -07 000000629 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:51:07.112 -07 000000629 INF: Y Motor: Moved to 69.8623 after 1447 ms (table move) 17-03-18 01:51:07.122 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168771 mm (DAC = 36868) 17-03-18 01:51:07.122 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.122 -07 000000591 INF: FPGA: Recv ZSGSRD 35569 17-03-18 01:51:07.132 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.132 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.132 -07 000000606 INF: FPGA: Recv ZSGSRD 35559 17-03-18 01:51:07.142 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.142 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.142 -07 000000591 INF: FPGA: Recv ZSGSRD 35556 17-03-18 01:51:07.152 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.152 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.152 -07 000000629 INF: FPGA: Recv ZSGSRD 35562 17-03-18 01:51:07.162 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.162 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.162 -07 000000591 INF: FPGA: Recv ZSGSRD 35561 17-03-18 01:51:07.172 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.172 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.172 -07 000000629 INF: FPGA: Recv ZSGSRD 35567 17-03-18 01:51:07.182 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.182 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.182 -07 000000606 INF: FPGA: Recv ZSGSRD 35561 17-03-18 01:51:07.192 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.192 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.192 -07 000000447 INF: FPGA: Recv ZSGSRD 35563 17-03-18 01:51:07.202 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.202 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.202 -07 000000561 INF: FPGA: Recv ZSGSRD 35559 17-03-18 01:51:07.212 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.212 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.212 -07 000000591 INF: FPGA: Recv ZSGSRD 35556 17-03-18 01:51:07.222 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.222 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:07.222 -07 000000444 INF: FPGA: Recv ZPIEZORD 31383 17-03-18 01:51:07.232 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.232 -07 000000610 INF: Z Motor: Piezo is near 47.0 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.626 V. Piezo Error = -9.2 V. 17-03-18 01:51:07.232 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35561 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35561 (-167.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35556 (-167.9 uncal um), Max = 35569 (-168.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:51:07.232 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35561, posNoise = 8, negNoise = 5 17-03-18 01:51:07.232 -07 000000610 INF: Z Motor: After move to -0.168771, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:07.232 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 110 ms (allowed 150 ms), total time = 1555 ms 17-03-18 01:51:07.232 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:07.272 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms 17-03-18 01:51:07.272 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:07.272 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.8623046875, Z-position -0.168774759984296. ---------- 17-03-18 01:51:07.272 -07 000000610 INF: Cycle 92 Tile 13 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:07.272 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36691, sync = True, waitForSettling = True) 17-03-18 01:51:07.272 -07 000000610 INF: Z Motor: Moving to -0.167961 mm, started at -0.168775 mm, distance = 0.81 um 17-03-18 01:51:07.272 -07 000000610 INF: FPGA: Xmit ZDACW 36691\n [Z Motor] 17-03-18 01:51:07.272 -07 000000618 INF: FPGA: Recv ZDACW 17-03-18 01:51:07.282 -07 000000610 INF: FPGA: 'ZDACW 36691' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:07.282 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:07.282 -07 000000629 INF: FPGA: Recv ZDACR 36691 17-03-18 01:51:07.292 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.292 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:07.441 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.441 -07 000000618 INF: FPGA: Recv ZSGSRD 35435 17-03-18 01:51:07.451 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:07.451 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.451 -07 000000444 INF: FPGA: Recv ZSGSRD 35435 17-03-18 01:51:07.461 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.461 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.461 -07 000000561 INF: FPGA: Recv ZSGSRD 35431 17-03-18 01:51:07.471 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.471 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.471 -07 000000444 INF: FPGA: Recv ZSGSRD 35437 17-03-18 01:51:07.481 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.481 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.481 -07 000000606 INF: FPGA: Recv ZSGSRD 35440 17-03-18 01:51:07.491 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.491 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.491 -07 000000444 INF: FPGA: Recv ZSGSRD 35438 17-03-18 01:51:07.501 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.501 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.501 -07 000000591 INF: FPGA: Recv ZSGSRD 35428 17-03-18 01:51:07.511 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.511 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.511 -07 000000618 INF: FPGA: Recv ZSGSRD 35432 17-03-18 01:51:07.521 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.521 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.521 -07 000000591 INF: FPGA: Recv ZSGSRD 35439 17-03-18 01:51:07.531 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.531 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:07.531 -07 000000629 INF: FPGA: Recv ZSGSRD 35438 17-03-18 01:51:07.541 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.541 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:07.541 -07 000000591 INF: FPGA: Recv ZPIEZORD 31181 17-03-18 01:51:07.551 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:07.551 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.599 V. Piezo Error = -9.4 V. 17-03-18 01:51:07.551 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35435 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35436 (-167.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35428 (-167.1 uncal um), Max = 35440 (-167.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:51:07.551 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35435, posNoise = 5, negNoise = 7 17-03-18 01:51:07.551 -07 000000610 INF: Z Motor: After move to -0.167961, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:07.551 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 01:51:07.551 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:07.551 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:07.551 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:07.551 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:07.551 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:07.551 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:07.551 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:07.551 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:07.551 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:07.551 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:07.551 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 01:51:07.551 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:07.561 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:07.561 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:07.561 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:07.561 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:07.571 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:51:07.571 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:51:07.571 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:51:07.571 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 23 ms. 17-03-18 01:51:07.571 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36868 150\n [Camera] 17-03-18 01:51:07.771 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:08.170 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:08.170 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:08.170 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:08.170 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:08.170 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 01:51:08.170 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:08.170 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:08.170 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:08.170 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:08.170 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 01:51:08.360 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36868 777 17-03-18 01:51:08.509 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:08.569 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 399 ms. 17-03-18 01:51:08.569 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms. 17-03-18 01:51:08.569 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:08.569 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:08.569 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 01:51:08.569 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 401 ms. 17-03-18 01:51:08.569 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:51:08.569 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:08.579 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:08.579 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-18 01:51:08.699 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:08.699 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:08.699 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:08.699 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:08.699 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 01:51:08.699 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:08.699 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:08.699 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:08.699 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:08.699 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 01:51:08.879 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.030322, 17-03-18 01:51:08.889 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:08.889 -07 000000618 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:08.889 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36868 150' command took 2 ms to send, 1306 ms to get response, and 1316 ms overall 17-03-18 01:51:08.889 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167988 17-03-18 01:51:08.889 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16799 mm 17-03-18 01:51:08.889 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:08.899 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-18 01:51:08.899 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 36697, sync = True, waitForSettling = False) 17-03-18 01:51:08.899 -07 000000501 INF: Z Motor: Moving to -0.167988 mm, started at -0.167965 mm, distance = -0.02 um 17-03-18 01:51:08.899 -07 000000447 INF: Y Motor: Moving to 70.7026 mm, started at 69.8623 mm, delta = 0.8403 mm 17-03-18 01:51:08.919 -07 000000501 INF: FPGA: Xmit ZDACW 36697\n [Z Motor] 17-03-18 01:51:08.919 -07 000000629 INF: FPGA: Recv ZDACW 17-03-18 01:51:08.929 -07 000000501 INF: FPGA: 'ZDACW 36697' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:51:08.929 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:08.929 -07 000000618 INF: FPGA: Recv YRDPOS 143078 17-03-18 01:51:08.939 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 38 ms overall 17-03-18 01:51:08.939 -07 000000447 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:08.939 -07 000000447 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:08.939 -07 000000447 INF: Y Motor: Moving 1344 steps-22 17-03-18 01:51:08.939 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:08.939 -07 000000444 INF: FPGA: Recv ZDACR 36697 17-03-18 01:51:08.949 -07 000000501 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:51:08.949 -07 000000501 INF: Z Motor: MoveAbsStepped took 49 ms (did NOT wait for settling yet)) 17-03-18 01:51:08.949 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:09.078 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 01:51:09.078 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms. 17-03-18 01:51:09.078 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:09.078 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 382 ms. 17-03-18 01:51:09.078 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:51:09.078 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:09.088 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:09.088 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:09.088 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 01:51:09.088 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 01:51:09.318 -07 000000480 INF: FPGA: Recv YMVTILE 17-03-18 01:51:09.318 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 01:51:09.378 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:09.378 -07 000000561 INF: FPGA: Recv YRDPOS 144767 17-03-18 01:51:09.388 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:09.388 -07 000000447 INF: Y Motor: Encoder = 144767 = motor step 113099.2 = 70.6870 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:09.388 -07 000000447 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-18 01:51:09.388 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.840 mm, average velocity = 2.166 mm/sec 17-03-18 01:51:10.336 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:10.336 -07 000000501 INF: FPGA: Recv YRDPOS 144767 17-03-18 01:51:10.346 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.346 -07 000000447 INF: Y Motor: Encoder = 144767 = motor step 113099.2 = 70.6870 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:10.366 -07 000000447 INF: Y Motor: After move to 70.702606, error = -0.015594, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:10.366 -07 000000447 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:10.366 -07 000000447 INF: Y Motor: Moved to 70.6870 after 1476 ms (table move) 17-03-18 01:51:10.366 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167988 mm (DAC = 36697) 17-03-18 01:51:10.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.376 -07 000000629 INF: FPGA: Recv ZSGSRD 35442 17-03-18 01:51:10.386 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:10.386 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.386 -07 000000501 INF: FPGA: Recv ZSGSRD 35441 17-03-18 01:51:10.396 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.396 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.396 -07 000000618 INF: FPGA: Recv ZSGSRD 35442 17-03-18 01:51:10.406 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.406 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.406 -07 000000444 INF: FPGA: Recv ZSGSRD 35440 17-03-18 01:51:10.416 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.416 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.416 -07 000000501 INF: FPGA: Recv ZSGSRD 35434 17-03-18 01:51:10.426 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.426 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.426 -07 000000561 INF: FPGA: Recv ZSGSRD 35440 17-03-18 01:51:10.436 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.436 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.436 -07 000000444 INF: FPGA: Recv ZSGSRD 35442 17-03-18 01:51:10.446 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.446 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.446 -07 000000480 INF: FPGA: Recv ZSGSRD 35440 17-03-18 01:51:10.456 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.456 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.456 -07 000000591 INF: FPGA: Recv ZSGSRD 35443 17-03-18 01:51:10.466 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.466 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.466 -07 000000618 INF: FPGA: Recv ZSGSRD 35449 17-03-18 01:51:10.476 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.476 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:10.476 -07 000000447 INF: FPGA: Recv ZPIEZORD 31236 17-03-18 01:51:10.486 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.486 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.600 V. Piezo Error = -9.3 V. 17-03-18 01:51:10.486 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35441 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35442 (-167.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 35434 (-167.1 uncal um), Max = 35449 (-167.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:51:10.486 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35441, posNoise = 8, negNoise = 7 17-03-18 01:51:10.486 -07 000000610 INF: Z Motor: After move to -0.167988, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:10.486 -07 000000610 INF: Z Motor: Settle wait time = 1478 ms, measure time = 111 ms (allowed 150 ms), total time = 1589 ms 17-03-18 01:51:10.486 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:10.526 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1631 ms 17-03-18 01:51:10.526 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:10.526 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68701171875, Z-position -0.168003854527285. ---------- 17-03-18 01:51:10.526 -07 000000610 INF: Cycle 92 Tile 14 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:10.526 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36520, sync = True, waitForSettling = True) 17-03-18 01:51:10.526 -07 000000610 INF: Z Motor: Moving to -0.167178 mm, started at -0.168004 mm, distance = 0.83 um 17-03-18 01:51:10.526 -07 000000610 INF: FPGA: Xmit ZDACW 36520\n [Z Motor] 17-03-18 01:51:10.526 -07 000000501 INF: FPGA: Recv ZDACW 17-03-18 01:51:10.536 -07 000000610 INF: FPGA: 'ZDACW 36520' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:51:10.536 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:10.536 -07 000000629 INF: FPGA: Recv ZDACR 36520 17-03-18 01:51:10.546 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.546 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:10.695 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.695 -07 000000606 INF: FPGA: Recv ZSGSRD 35317 17-03-18 01:51:10.705 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:10.705 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.705 -07 000000618 INF: FPGA: Recv ZSGSRD 35316 17-03-18 01:51:10.715 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.715 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.715 -07 000000501 INF: FPGA: Recv ZSGSRD 35315 17-03-18 01:51:10.725 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.725 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.725 -07 000000629 INF: FPGA: Recv ZSGSRD 35316 17-03-18 01:51:10.735 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:10.735 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.735 -07 000000501 INF: FPGA: Recv ZSGSRD 35311 17-03-18 01:51:10.745 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.745 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.745 -07 000000444 INF: FPGA: Recv ZSGSRD 35315 17-03-18 01:51:10.755 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.755 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.755 -07 000000480 INF: FPGA: Recv ZSGSRD 35315 17-03-18 01:51:10.765 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.765 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.765 -07 000000629 INF: FPGA: Recv ZSGSRD 35315 17-03-18 01:51:10.775 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.775 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.775 -07 000000447 INF: FPGA: Recv ZSGSRD 35318 17-03-18 01:51:10.785 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.785 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:10.785 -07 000000444 INF: FPGA: Recv ZSGSRD 35313 17-03-18 01:51:10.795 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.795 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:10.795 -07 000000480 INF: FPGA: Recv ZPIEZORD 31057 17-03-18 01:51:10.805 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:10.805 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.573 V. Piezo Error = -9.4 V. 17-03-18 01:51:10.805 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.2 um, Read 10 ADC samples: Avg = 35315 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35315 (-166.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35311 (-166.3 uncal um), Max = 35318 (-166.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:10.805 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35315, posNoise = 3, negNoise = 4 17-03-18 01:51:10.805 -07 000000610 INF: Z Motor: After move to -0.167178, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:10.805 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms) 17-03-18 01:51:10.805 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:10.805 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:10.805 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:10.805 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:10.805 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:10.805 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:10.805 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:10.805 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:10.805 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:10.805 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:10.805 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:10.805 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:10.815 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:10.815 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:10.815 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:10.815 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:10.825 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:51:10.825 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:10.825 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:51:10.825 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:10.835 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36697 150\n [Camera] 17-03-18 01:51:11.035 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:11.424 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:11.424 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:11.424 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:11.424 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:11.424 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 01:51:11.424 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:11.424 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:11.424 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:11.424 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:11.424 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 01:51:11.614 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36697 777 17-03-18 01:51:11.763 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:11.813 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 391 ms. 17-03-18 01:51:11.813 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 01:51:11.813 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:11.813 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 391 ms. 17-03-18 01:51:11.813 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:51:11.813 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:11.823 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:11.823 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 01:51:11.823 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:11.823 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:51:11.953 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:11.953 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:11.953 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:11.953 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:11.953 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 01:51:11.953 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:11.953 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:11.953 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:11.953 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:11.953 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 01:51:12.033 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:12.033 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:12.143 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:12.143 -07 000000629 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:12.143 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36697 150' command took 2 ms to send, 1305 ms to get response, and 1314 ms overall 17-03-18 01:51:12.143 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 01:51:12.143 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68701171875, Z-Position -0.167194403797423. ------ 17-03-18 01:51:12.153 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:12.153 -07 000000618 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.17377 mm 17-03-18 01:51:12.153 -07 000000618 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:12.153 -07 000000629 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:12.153 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-18 01:51:12.153 -07 000000606 INF: Y Motor: Moving to 71.5326 mm, started at 70.6870 mm, delta = 0.8456 mm 17-03-18 01:51:12.153 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 37961, sync = True, waitForSettling = False) 17-03-18 01:51:12.153 -07 000000480 INF: Z Motor: Moving to -0.173774 mm, started at -0.167194 mm, distance = -6.58 um 17-03-18 01:51:12.163 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:12.163 -07 000000480 INF: FPGA: Xmit ZDACW 37961\n [Z Motor] 17-03-18 01:51:12.163 -07 000000629 INF: FPGA: Recv ZDACW 17-03-18 01:51:12.173 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:12.173 -07 000000480 INF: FPGA: 'ZDACW 37961' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 01:51:12.173 -07 000000576 INF: FPGA: Recv YRDPOS 144768 17-03-18 01:51:12.183 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:51:12.183 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 01:51:12.183 -07 000000606 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:12.183 -07 000000606 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:12.183 -07 000000606 INF: Y Motor: Moving 1352 steps-32 17-03-18 01:51:12.193 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:12.193 -07 000000629 INF: FPGA: Recv ZDACR 37961 17-03-18 01:51:12.203 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:12.203 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:51:12.203 -07 000000480 INF: Z Motor: MoveAbsStepped took 43 ms (did NOT wait for settling yet)) 17-03-18 01:51:12.332 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 01:51:12.332 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:51:12.332 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:12.332 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 01:51:12.332 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 01:51:12.332 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:12.342 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:12.342 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 01:51:12.342 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:12.342 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:51:12.382 -07 000000424 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:51:12.382 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 01:51:12.572 -07 000000424 INF: FPGA: Recv YMVTILE 17-03-18 01:51:12.572 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall 17-03-18 01:51:12.622 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:12.622 -07 000000447 INF: FPGA: Recv YRDPOS 146468 17-03-18 01:51:12.632 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:12.632 -07 000000606 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:12.632 -07 000000606 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm) 17-03-18 01:51:12.632 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.846 mm, average velocity = 2.146 mm/sec 17-03-18 01:51:13.580 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:13.580 -07 000000629 INF: FPGA: Recv YRDPOS 146468 17-03-18 01:51:13.590 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:13.590 -07 000000606 INF: Y Motor: Encoder = 146468 = motor step 114428.1 = 71.5176 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:13.610 -07 000000606 INF: Y Motor: After move to 71.532608, error = -0.015030, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:13.610 -07 000000606 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:13.610 -07 000000606 INF: Y Motor: Moved to 71.5176 after 1464 ms (table move) 17-03-18 01:51:13.620 -07 000000618 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173774 mm (DAC = 37961) 17-03-18 01:51:13.620 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.620 -07 000000606 INF: FPGA: Recv ZSGSRD 36346 17-03-18 01:51:13.630 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:13.630 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.630 -07 000000606 INF: FPGA: Recv ZSGSRD 36340 17-03-18 01:51:13.640 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.640 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.640 -07 000000480 INF: FPGA: Recv ZSGSRD 36346 17-03-18 01:51:13.650 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.650 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.650 -07 000000606 INF: FPGA: Recv ZSGSRD 36344 17-03-18 01:51:13.660 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.660 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.660 -07 000000480 INF: FPGA: Recv ZSGSRD 36339 17-03-18 01:51:13.670 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.670 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.670 -07 000000447 INF: FPGA: Recv ZSGSRD 36346 17-03-18 01:51:13.680 -07 000000618 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.680 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.680 -07 000000447 INF: FPGA: Recv ZSGSRD 36335 17-03-18 01:51:13.690 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.690 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.690 -07 000000447 INF: FPGA: Recv ZSGSRD 36342 17-03-18 01:51:13.700 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.700 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.700 -07 000000447 INF: FPGA: Recv ZSGSRD 36343 17-03-18 01:51:13.710 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.710 -07 000000618 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:13.710 -07 000000444 INF: FPGA: Recv ZSGSRD 36346 17-03-18 01:51:13.720 -07 000000618 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:13.720 -07 000000618 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:13.720 -07 000000576 INF: FPGA: Recv ZPIEZORD 32477 17-03-18 01:51:13.730 -07 000000618 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:13.730 -07 000000618 INF: Z Motor: Piezo is near 49.4 V (nominally 0 to 100 V), expect near 57.9 V, since DAC is at 5.792 V. Piezo Error = -8.5 V. 17-03-18 01:51:13.730 -07 000000618 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.8 um, Read 10 ADC samples: Avg = 36343 (-172.9 uncal um), Error = 0.9 uncal um, Median = 36344 (-172.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36335 (-172.9 uncal um), Max = 36346 (-172.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:51:13.730 -07 000000618 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36343, posNoise = 3, negNoise = 8 17-03-18 01:51:13.730 -07 000000618 INF: Z Motor: After move to -0.173774, error = -0.000024, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:13.730 -07 000000618 INF: Z Motor: Settle wait time = 1466 ms, measure time = 108 ms (allowed 150 ms), total time = 1574 ms 17-03-18 01:51:13.730 -07 000000618 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:13.780 -07 000000618 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1627 ms 17-03-18 01:51:13.780 -07 000000618 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:13.780 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:13.780 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:13.780 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:13.780 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:13.780 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:51:13.780 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:13.780 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:13.780 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:51:13.790 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms. 17-03-18 01:51:13.790 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:51:13.800 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 01:51:13.800 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms. 17-03-18 01:51:13.800 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:51:13.849 -07 000000480 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:51:14.149 -07 000000424 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:51:14.149 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:51:14.149 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:51:14.149 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 596199184, 0x0, 559484976) start. 17-03-18 01:51:14.189 -07 000000480 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:51:14.189 -07 000000424 INF: FPGA: Recv CAMSNAP 17-03-18 01:51:14.189 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall 17-03-18 01:51:14.239 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.02213, 17-03-18 01:51:14.279 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 596199184, 0x0, 559484976) end. Duration was 126 ms. 17-03-18 01:51:14.279 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:14.279 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:51:14.279 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 01:51:14.289 -07 000000480 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:14.289 -07 000000501 INF: Autofocus start 17-03-18 01:51:14.289 -07 000000501 INF: MeasureProfile start 17-03-18 01:51:14.289 -07 000000512 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:14.299 -07 000000480 INF: FPGA: 'FOCMRRCUR 80' command took 2 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:14.299 -07 000000480 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:51:14.309 -07 000000501 INF: MeasureProfile done 17-03-18 01:51:14.309 -07 000000501 INF: X=16 Z correction [um]=0.01042744 17-03-18 01:51:14.309 -07 000000501 INF: Autofocus finished 17-03-18 01:51:14.498 -07 000000512 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:51:14.498 -07 000000480 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:51:14.498 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.517578125, Z-position -0.173798493879153. ---------- 17-03-18 01:51:14.498 -07 000000610 INF: Cycle 92 Tile 15 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:14.508 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36476, sync = True, waitForSettling = True) 17-03-18 01:51:14.508 -07 000000610 INF: Z Motor: Moving to -0.166976 mm, started at -0.173798 mm, distance = 6.82 um 17-03-18 01:51:14.508 -07 000000610 INF: FPGA: Xmit ZDACW 36476\n [Z Motor] 17-03-18 01:51:14.508 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 01:51:14.518 -07 000000610 INF: FPGA: 'ZDACW 36476' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:14.518 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:14.518 -07 000000618 INF: FPGA: Recv ZDACR 36476 17-03-18 01:51:14.528 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.528 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:14.678 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.678 -07 000000618 INF: FPGA: Recv ZSGSRD 35281 17-03-18 01:51:14.688 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:14.688 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.688 -07 000000591 INF: FPGA: Recv ZSGSRD 35284 17-03-18 01:51:14.698 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.698 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.698 -07 000000480 INF: FPGA: Recv ZSGSRD 35284 17-03-18 01:51:14.708 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.708 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.708 -07 000000591 INF: FPGA: Recv ZSGSRD 35286 17-03-18 01:51:14.718 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.718 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.718 -07 000000480 INF: FPGA: Recv ZSGSRD 35280 17-03-18 01:51:14.728 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.728 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.728 -07 000000591 INF: FPGA: Recv ZSGSRD 35287 17-03-18 01:51:14.738 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.738 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.738 -07 000000480 INF: FPGA: Recv ZSGSRD 35289 17-03-18 01:51:14.748 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.748 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.748 -07 000000591 INF: FPGA: Recv ZSGSRD 35280 17-03-18 01:51:14.758 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.758 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.758 -07 000000480 INF: FPGA: Recv ZSGSRD 35283 17-03-18 01:51:14.768 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.768 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:14.768 -07 000000591 INF: FPGA: Recv ZSGSRD 35286 17-03-18 01:51:14.778 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.778 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:14.778 -07 000000480 INF: FPGA: Recv ZPIEZORD 31059 17-03-18 01:51:14.788 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:14.788 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.566 V. Piezo Error = -9.3 V. 17-03-18 01:51:14.788 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35284 (-166.1 uncal um), Error = 0.8 uncal um, Median = 35284 (-166.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35280 (-166.1 uncal um), Max = 35289 (-166.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:14.788 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35284, posNoise = 5, negNoise = 4 17-03-18 01:51:14.788 -07 000000610 INF: Z Motor: After move to -0.166976, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:14.788 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 01:51:14.788 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:14.788 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:14.788 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:14.788 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:14.788 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:14.788 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:14.788 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:14.788 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:14.788 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 01:51:14.788 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:14.788 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:51:14.788 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:14.798 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:14.798 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:14.798 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:14.798 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:14.808 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 01:51:14.808 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 01:51:14.808 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 01:51:14.808 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 01:51:14.808 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36653 150\n [Camera] 17-03-18 01:51:15.007 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:15.397 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:15.397 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:15.397 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:15.397 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:15.397 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 01:51:15.397 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:15.397 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:15.407 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:15.407 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:15.407 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 01:51:15.596 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36653 778 17-03-18 01:51:15.736 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:15.776 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 375 ms. 17-03-18 01:51:15.776 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms. 17-03-18 01:51:15.776 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:15.776 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 01:51:15.776 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 01:51:15.776 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:15.776 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:15.776 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 01:51:15.786 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:15.786 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 01:51:15.926 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:15.926 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:15.936 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:15.936 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:15.936 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-18 01:51:15.936 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:15.936 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:15.936 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:15.936 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:15.936 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-18 01:51:16.115 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:16.115 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:16.115 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36653 150' command took 2 ms to send, 1309 ms to get response, and 1316 ms overall 17-03-18 01:51:16.125 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167331 17-03-18 01:51:16.125 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16733 mm 17-03-18 01:51:16.125 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:16.125 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-18 01:51:16.125 -07 000000480 INF: Y Motor: Moving to 72.3626 mm, started at 71.5176 mm, delta = 0.8450 mm 17-03-18 01:51:16.125 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 36554, sync = True, waitForSettling = False) 17-03-18 01:51:16.125 -07 000000512 INF: Z Motor: Moving to -0.167333 mm, started at -0.166995 mm, distance = -0.34 um 17-03-18 01:51:16.125 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:16.125 -07 000000576 INF: FPGA: Recv YRDPOS 146469 17-03-18 01:51:16.135 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:51:16.135 -07 000000480 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:16.135 -07 000000512 INF: FPGA: Xmit ZDACW 36554\n [Z Motor] 17-03-18 01:51:16.135 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:51:16.135 -07 000000480 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:16.135 -07 000000480 INF: Y Motor: Moving 1351 steps-31 17-03-18 01:51:16.145 -07 000000512 INF: FPGA: 'ZDACW 36554' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 01:51:16.145 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:16.155 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:16.155 -07 000000444 INF: FPGA: Recv ZDACR 36554 17-03-18 01:51:16.165 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:51:16.165 -07 000000512 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet)) 17-03-18 01:51:16.335 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 401 ms. 17-03-18 01:51:16.335 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:51:16.335 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:16.335 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 404 ms. 17-03-18 01:51:16.335 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:51:16.335 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:16.335 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:16.345 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 01:51:16.345 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 413 ms. 17-03-18 01:51:16.345 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms. 17-03-18 01:51:16.514 -07 000000512 INF: FPGA: Recv YMVTILE 17-03-18 01:51:16.514 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-18 01:51:16.564 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:16.564 -07 000000576 INF: FPGA: Recv YRDPOS 148170 17-03-18 01:51:16.574 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:16.574 -07 000000480 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:16.574 -07 000000480 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm) 17-03-18 01:51:16.574 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.845 mm, average velocity = 2.195 mm/sec 17-03-18 01:51:17.024 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:17.024 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:17.523 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:17.523 -07 000000618 INF: FPGA: Recv YRDPOS 148170 17-03-18 01:51:17.533 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:17.533 -07 000000480 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:17.553 -07 000000480 INF: Y Motor: After move to 72.362610, error = -0.013977, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:17.553 -07 000000480 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:17.553 -07 000000480 INF: Y Motor: Moved to 72.3486 after 1433 ms (table move) 17-03-18 01:51:17.563 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167333 mm (DAC = 36554) 17-03-18 01:51:17.563 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.563 -07 000000424 INF: FPGA: Recv ZSGSRD 35344 17-03-18 01:51:17.573 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:17.573 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.573 -07 000000447 INF: FPGA: Recv ZSGSRD 35337 17-03-18 01:51:17.582 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.582 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.582 -07 000000591 INF: FPGA: Recv ZSGSRD 35338 17-03-18 01:51:17.592 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.592 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.592 -07 000000618 INF: FPGA: Recv ZSGSRD 35338 17-03-18 01:51:17.602 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.602 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.602 -07 000000591 INF: FPGA: Recv ZSGSRD 35339 17-03-18 01:51:17.612 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.612 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.612 -07 000000618 INF: FPGA: Recv ZSGSRD 35336 17-03-18 01:51:17.622 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.622 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.622 -07 000000512 INF: FPGA: Recv ZSGSRD 35333 17-03-18 01:51:17.632 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.632 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.632 -07 000000480 INF: FPGA: Recv ZSGSRD 35339 17-03-18 01:51:17.642 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.642 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.642 -07 000000576 INF: FPGA: Recv ZSGSRD 35342 17-03-18 01:51:17.652 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.652 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.652 -07 000000618 INF: FPGA: Recv ZSGSRD 35342 17-03-18 01:51:17.662 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.662 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:17.662 -07 000000591 INF: FPGA: Recv ZPIEZORD 31116 17-03-18 01:51:17.672 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.672 -07 000000610 INF: Z Motor: Piezo is near 46.5 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.578 V. Piezo Error = -9.3 V. 17-03-18 01:51:17.672 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.3 um, Read 10 ADC samples: Avg = 35339 (-166.5 uncal um), Error = 0.9 uncal um, Median = 35338 (-166.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35333 (-166.4 uncal um), Max = 35344 (-166.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:51:17.672 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35339, posNoise = 5, negNoise = 6 17-03-18 01:51:17.672 -07 000000610 INF: Z Motor: After move to -0.167333, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:17.672 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 111 ms (allowed 150 ms), total time = 1546 ms 17-03-18 01:51:17.672 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:17.712 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms 17-03-18 01:51:17.712 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:17.712 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.3486328125, Z-position -0.167348584888825. ---------- 17-03-18 01:51:17.712 -07 000000610 INF: Cycle 92 Tile 16 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:17.712 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36377, sync = True, waitForSettling = True) 17-03-18 01:51:17.712 -07 000000610 INF: Z Motor: Moving to -0.166523 mm, started at -0.167349 mm, distance = 0.83 um 17-03-18 01:51:17.712 -07 000000610 INF: FPGA: Xmit ZDACW 36377\n [Z Motor] 17-03-18 01:51:17.712 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:51:17.722 -07 000000610 INF: FPGA: 'ZDACW 36377' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:51:17.722 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:17.722 -07 000000591 INF: FPGA: Recv ZDACR 36377 17-03-18 01:51:17.732 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.732 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:17.882 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.882 -07 000000512 INF: FPGA: Recv ZSGSRD 35214 17-03-18 01:51:17.892 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.892 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.892 -07 000000576 INF: FPGA: Recv ZSGSRD 35213 17-03-18 01:51:17.902 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.902 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.902 -07 000000480 INF: FPGA: Recv ZSGSRD 35210 17-03-18 01:51:17.912 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.912 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.912 -07 000000576 INF: FPGA: Recv ZSGSRD 35209 17-03-18 01:51:17.922 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.922 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.922 -07 000000512 INF: FPGA: Recv ZSGSRD 35208 17-03-18 01:51:17.932 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.932 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.932 -07 000000618 INF: FPGA: Recv ZSGSRD 35216 17-03-18 01:51:17.942 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.942 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.942 -07 000000424 INF: FPGA: Recv ZSGSRD 35214 17-03-18 01:51:17.952 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.952 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.952 -07 000000618 INF: FPGA: Recv ZSGSRD 35211 17-03-18 01:51:17.962 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.962 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.962 -07 000000512 INF: FPGA: Recv ZSGSRD 35210 17-03-18 01:51:17.972 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.972 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:17.972 -07 000000447 INF: FPGA: Recv ZSGSRD 35212 17-03-18 01:51:17.982 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.982 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:17.982 -07 000000480 INF: FPGA: Recv ZPIEZORD 30988 17-03-18 01:51:17.992 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:17.992 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.551 V. Piezo Error = -9.3 V. 17-03-18 01:51:17.992 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.5 um, Read 10 ADC samples: Avg = 35212 (-165.7 uncal um), Error = 0.9 uncal um, Median = 35212 (-165.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35208 (-165.6 uncal um), Max = 35216 (-165.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:17.992 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35212, posNoise = 4, negNoise = 4 17-03-18 01:51:17.992 -07 000000610 INF: Z Motor: After move to -0.166523, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:17.992 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 01:51:17.992 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:17.992 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:17.992 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:17.992 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:17.992 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:17.992 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:17.992 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:17.992 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:17.992 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:51:17.992 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:17.992 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:17.992 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:18.002 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:18.002 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:18.002 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:18.002 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:18.002 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 01:51:18.002 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:51:18.012 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 01:51:18.012 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:51:18.012 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36554 150\n [Camera] 17-03-18 01:51:18.211 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 193 17-03-18 01:51:18.601 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:18.601 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:18.601 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:18.601 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:18.601 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start. 17-03-18 01:51:18.601 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:18.601 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:18.601 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:18.601 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:18.601 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start. 17-03-18 01:51:18.790 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36554 777 17-03-18 01:51:18.940 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:18.980 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 383 ms. 17-03-18 01:51:18.980 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 01:51:18.980 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:18.990 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 382 ms. 17-03-18 01:51:18.990 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 01:51:18.990 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:18.990 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:18.990 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 01:51:18.990 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:19.000 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:51:19.130 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:19.130 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:19.130 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:19.130 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:19.130 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start. 17-03-18 01:51:19.130 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:19.130 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:19.130 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:19.130 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:19.130 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start. 17-03-18 01:51:19.319 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:19.319 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:19.319 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36554 150' command took 2 ms to send, 1307 ms to get response, and 1314 ms overall 17-03-18 01:51:19.319 -07 000000610 INF: Skipping AutoFocus in Tile 17: adopting Best-Z from the cache: -0.166978 17-03-18 01:51:19.319 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.16698 mm 17-03-18 01:51:19.319 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:19.329 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-18 01:51:19.329 -07 000000512 INF: Y Motor: Moving to 73.1926 mm, started at 72.3486 mm, delta = 0.8440 mm 17-03-18 01:51:19.329 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:19.329 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 36476, sync = True, waitForSettling = False) 17-03-18 01:51:19.329 -07 000000618 INF: Z Motor: Moving to -0.166976 mm, started at -0.166533 mm, distance = -0.44 um 17-03-18 01:51:19.329 -07 000000576 INF: FPGA: Recv YRDPOS 148170 17-03-18 01:51:19.339 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:19.339 -07 000000512 INF: Y Motor: Encoder = 148170 = motor step 115757.8 = 72.3486 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:19.339 -07 000000512 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:19.339 -07 000000512 INF: Y Motor: Moving 1350 steps-29 17-03-18 01:51:19.339 -07 000000618 INF: FPGA: Xmit ZDACW 36476\n [Z Motor] 17-03-18 01:51:19.339 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 01:51:19.349 -07 000000618 INF: FPGA: 'ZDACW 36476' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 01:51:19.349 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:19.349 -07 000000430 INF: FPGA: Recv ZDACR 36476 17-03-18 01:51:19.359 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:19.359 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:19.359 -07 000000618 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet)) 17-03-18 01:51:19.529 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 400 ms. 17-03-18 01:51:19.529 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:51:19.529 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:19.539 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 401 ms. 17-03-18 01:51:19.539 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:51:19.539 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:19.539 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:19.539 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-18 01:51:19.539 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:19.549 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 01:51:19.599 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.011254, 17-03-18 01:51:19.728 -07 000000487 INF: FPGA: Recv YMVTILE 17-03-18 01:51:19.728 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:51:19.778 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:19.778 -07 000000626 INF: FPGA: Recv YRDPOS 149862 17-03-18 01:51:19.788 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:19.788 -07 000000512 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:19.788 -07 000000512 INF: Y Motor: Position error before settling (table move) = -36 encoder counts (-0.018 mm) 17-03-18 01:51:19.788 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.126 mm/sec 17-03-18 01:51:20.737 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:20.737 -07 000000487 INF: FPGA: Recv YRDPOS 149862 17-03-18 01:51:20.747 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:20.747 -07 000000512 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:20.767 -07 000000512 INF: Y Motor: After move to 73.192604, error = -0.017799, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:20.767 -07 000000512 INF: Y Motor: Position error after settling (table move) = -36 encoder counts (-0.018 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:20.767 -07 000000512 INF: Y Motor: Moved to 73.1748 after 1446 ms (table move) 17-03-18 01:51:20.767 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166976 mm (DAC = 36476) 17-03-18 01:51:20.776 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.776 -07 000000579 INF: FPGA: Recv ZSGSRD 35278 17-03-18 01:51:20.786 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:20.786 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.786 -07 000000430 INF: FPGA: Recv ZSGSRD 35282 17-03-18 01:51:20.796 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.796 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.796 -07 000000591 INF: FPGA: Recv ZSGSRD 35284 17-03-18 01:51:20.806 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.806 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.806 -07 000000618 INF: FPGA: Recv ZSGSRD 35285 17-03-18 01:51:20.816 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.816 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.816 -07 000000430 INF: FPGA: Recv ZSGSRD 35285 17-03-18 01:51:20.826 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.826 -07 000000579 INF: FPGA: Recv ZSGSRD 35287 17-03-18 01:51:20.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.836 -07 000000591 INF: FPGA: Recv ZSGSRD 35279 17-03-18 01:51:20.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.846 -07 000000579 INF: FPGA: Recv ZSGSRD 35274 17-03-18 01:51:20.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.856 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.856 -07 000000591 INF: FPGA: Recv ZSGSRD 35285 17-03-18 01:51:20.866 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.866 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:20.866 -07 000000430 INF: FPGA: Recv ZSGSRD 35286 17-03-18 01:51:20.876 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.876 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:20.876 -07 000000618 INF: FPGA: Recv ZPIEZORD 31093 17-03-18 01:51:20.886 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.886 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.566 V. Piezo Error = -9.2 V. 17-03-18 01:51:20.886 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.0 um, Read 10 ADC samples: Avg = 35282 (-166.1 uncal um), Error = 0.9 uncal um, Median = 35284 (-166.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35274 (-166.1 uncal um), Max = 35287 (-166.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:51:20.886 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35282, posNoise = 5, negNoise = 8 17-03-18 01:51:20.886 -07 000000610 INF: Z Motor: After move to -0.166976, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:20.886 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 110 ms (allowed 150 ms), total time = 1559 ms 17-03-18 01:51:20.886 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:20.926 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms 17-03-18 01:51:20.926 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:20.926 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.1748046875, Z-position -0.166982404796745. ---------- 17-03-18 01:51:20.926 -07 000000610 INF: Cycle 92 Tile 17 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:20.926 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36300, sync = True, waitForSettling = True) 17-03-18 01:51:20.926 -07 000000610 INF: Z Motor: Moving to -0.166171 mm, started at -0.166982 mm, distance = 0.81 um 17-03-18 01:51:20.926 -07 000000610 INF: FPGA: Xmit ZDACW 36300\n [Z Motor] 17-03-18 01:51:20.926 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:51:20.936 -07 000000610 INF: FPGA: 'ZDACW 36300' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:51:20.936 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:20.936 -07 000000480 INF: FPGA: Recv ZDACR 36300 17-03-18 01:51:20.946 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:20.946 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:21.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.096 -07 000000591 INF: FPGA: Recv ZSGSRD 35161 17-03-18 01:51:21.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:21.106 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.106 -07 000000487 INF: FPGA: Recv ZSGSRD 35160 17-03-18 01:51:21.116 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.116 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.116 -07 000000424 INF: FPGA: Recv ZSGSRD 35158 17-03-18 01:51:21.126 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.126 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.126 -07 000000618 INF: FPGA: Recv ZSGSRD 35160 17-03-18 01:51:21.136 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.136 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.136 -07 000000579 INF: FPGA: Recv ZSGSRD 35157 17-03-18 01:51:21.146 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.146 -07 000000430 INF: FPGA: Recv ZSGSRD 35158 17-03-18 01:51:21.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.156 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.156 -07 000000444 INF: FPGA: Recv ZSGSRD 35158 17-03-18 01:51:21.166 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.166 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.166 -07 000000487 INF: FPGA: Recv ZSGSRD 35154 17-03-18 01:51:21.176 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.176 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.176 -07 000000576 INF: FPGA: Recv ZSGSRD 35159 17-03-18 01:51:21.186 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.186 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:21.186 -07 000000424 INF: FPGA: Recv ZSGSRD 35158 17-03-18 01:51:21.196 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.196 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:21.196 -07 000000444 INF: FPGA: Recv ZPIEZORD 30898 17-03-18 01:51:21.206 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:21.206 -07 000000610 INF: Z Motor: Piezo is near 46.0 V (nominally 0 to 100 V), expect near 55.4 V, since DAC is at 5.539 V. Piezo Error = -9.4 V. 17-03-18 01:51:21.206 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.2 um, Read 10 ADC samples: Avg = 35158 (-165.3 uncal um), Error = 0.9 uncal um, Median = 35158 (-165.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35154 (-165.3 uncal um), Max = 35161 (-165.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:21.206 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35158, posNoise = 3, negNoise = 4 17-03-18 01:51:21.206 -07 000000610 INF: Z Motor: After move to -0.166171, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:21.206 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 01:51:21.206 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:21.206 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:21.206 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:21.206 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:21.206 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:21.206 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:21.206 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:21.206 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:21.206 -07 000000487 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:21.206 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:21.206 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:21.206 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:21.206 -07 000000487 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:21.206 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:21.206 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:21.206 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:21.226 -07 000000487 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:51:21.226 -07 000000487 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:21.226 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:51:21.226 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:21.226 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36476 150\n [Camera] 17-03-18 01:51:21.425 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:21.825 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:21.825 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:21.825 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:21.825 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:21.825 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start. 17-03-18 01:51:21.825 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:21.825 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:21.825 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:21.825 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:21.825 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start. 17-03-18 01:51:22.014 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:22.014 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:22.014 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36476 777 17-03-18 01:51:22.164 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:22.204 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 381 ms. 17-03-18 01:51:22.204 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:51:22.204 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:22.204 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 01:51:22.204 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 01:51:22.204 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:22.204 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:22.204 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 01:51:22.214 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:22.214 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 01:51:22.354 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:22.354 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:22.354 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:22.354 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:22.354 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start. 17-03-18 01:51:22.354 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:22.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:22.354 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:22.503 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:22.503 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:22.543 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:22.543 -07 000000430 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:22.543 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36476 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:51:22.543 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166623 17-03-18 01:51:22.543 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16662 mm 17-03-18 01:51:22.543 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:22.543 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-18 01:51:22.543 -07 000000444 INF: Y Motor: Moving to 74.0226 mm, started at 73.1748 mm, delta = 0.8478 mm 17-03-18 01:51:22.543 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 36399, sync = True, waitForSettling = False) 17-03-18 01:51:22.543 -07 000000424 INF: Z Motor: Moving to -0.166624 mm, started at -0.166186 mm, distance = -0.44 um 17-03-18 01:51:22.543 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:22.553 -07 000000424 INF: FPGA: Xmit ZDACW 36399\n [Z Motor] 17-03-18 01:51:22.553 -07 000000626 INF: FPGA: Recv YRDPOS 149862 17-03-18 01:51:22.553 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 01:51:22.553 -07 000000444 INF: Y Motor: Encoder = 149862 = motor step 117079.7 = 73.1748 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:22.553 -07 000000444 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:22.553 -07 000000444 INF: Y Motor: Moving 1356 steps-36 17-03-18 01:51:22.553 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:51:22.563 -07 000000424 INF: FPGA: 'ZDACW 36399' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:22.563 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:22.563 -07 000000576 INF: FPGA: Recv ZDACR 36399 17-03-18 01:51:22.573 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:22.573 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:22.573 -07 000000424 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-18 01:51:22.753 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 401 ms. 17-03-18 01:51:22.753 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:51:22.753 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:22.753 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:22.753 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 405 ms. 17-03-18 01:51:22.873 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 371 ms. 17-03-18 01:51:22.873 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms. 17-03-18 01:51:22.873 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:22.883 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:22.883 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 530 ms. 17-03-18 01:51:22.952 -07 000000591 INF: FPGA: Recv YMVTILE 17-03-18 01:51:22.952 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 397 ms overall 17-03-18 01:51:22.982 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:22.982 -07 000000487 INF: FPGA: Recv YRDPOS 151566 17-03-18 01:51:22.992 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:22.992 -07 000000444 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:22.992 -07 000000444 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm) 17-03-18 01:51:22.992 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.848 mm, average velocity = 2.136 mm/sec 17-03-18 01:51:23.941 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:23.941 -07 000000626 INF: FPGA: Recv YRDPOS 151566 17-03-18 01:51:23.951 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:23.951 -07 000000444 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:23.971 -07 000000444 INF: Y Motor: After move to 74.022606, error = -0.015770, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:23.971 -07 000000444 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:23.971 -07 000000444 INF: Y Motor: Moved to 74.0068 after 1421 ms (table move) 17-03-18 01:51:23.971 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166624 mm (DAC = 36399) 17-03-18 01:51:23.971 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:23.971 -07 000000512 INF: FPGA: Recv ZSGSRD 35230 17-03-18 01:51:23.980 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:23.980 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:23.980 -07 000000576 INF: FPGA: Recv ZSGSRD 35222 17-03-18 01:51:23.990 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:23.990 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:23.990 -07 000000626 INF: FPGA: Recv ZSGSRD 35233 17-03-18 01:51:24.000 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.000 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.000 -07 000000591 INF: FPGA: Recv ZSGSRD 35226 17-03-18 01:51:24.010 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.010 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.010 -07 000000430 INF: FPGA: Recv ZSGSRD 35227 17-03-18 01:51:24.020 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.020 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.020 -07 000000444 INF: FPGA: Recv ZSGSRD 35231 17-03-18 01:51:24.030 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.030 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.030 -07 000000487 INF: FPGA: Recv ZSGSRD 35220 17-03-18 01:51:24.040 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.040 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.040 -07 000000444 INF: FPGA: Recv ZSGSRD 35228 17-03-18 01:51:24.050 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.050 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.050 -07 000000487 INF: FPGA: Recv ZSGSRD 35222 17-03-18 01:51:24.060 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.060 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.060 -07 000000424 INF: FPGA: Recv ZSGSRD 35233 17-03-18 01:51:24.070 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.070 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:24.070 -07 000000576 INF: FPGA: Recv ZPIEZORD 31069 17-03-18 01:51:24.080 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.080 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.554 V. Piezo Error = -9.2 V. 17-03-18 01:51:24.080 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.6 um, Read 10 ADC samples: Avg = 35227 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35228 (-165.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35220 (-165.7 uncal um), Max = 35233 (-165.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:51:24.080 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35227, posNoise = 6, negNoise = 7 17-03-18 01:51:24.080 -07 000000610 INF: Z Motor: After move to -0.166624, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:24.080 -07 000000610 INF: Z Motor: Settle wait time = 1424 ms, measure time = 107 ms (allowed 150 ms), total time = 1531 ms 17-03-18 01:51:24.080 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:24.130 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms 17-03-18 01:51:24.130 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:24.130 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0068359375, Z-position -0.166629073128948. ---------- 17-03-18 01:51:24.130 -07 000000610 INF: Cycle 92 Tile 18 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:24.130 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36222, sync = True, waitForSettling = True) 17-03-18 01:51:24.130 -07 000000610 INF: Z Motor: Moving to -0.165814 mm, started at -0.166629 mm, distance = 0.82 um 17-03-18 01:51:24.130 -07 000000610 INF: FPGA: Xmit ZDACW 36222\n [Z Motor] 17-03-18 01:51:24.130 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 01:51:24.140 -07 000000610 INF: FPGA: 'ZDACW 36222' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:24.140 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:24.140 -07 000000444 INF: FPGA: Recv ZDACR 36222 17-03-18 01:51:24.150 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.150 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:24.300 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.300 -07 000000576 INF: FPGA: Recv ZSGSRD 35104 17-03-18 01:51:24.310 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:24.310 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.310 -07 000000424 INF: FPGA: Recv ZSGSRD 35102 17-03-18 01:51:24.320 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.330 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.330 -07 000000626 INF: FPGA: Recv ZSGSRD 35105 17-03-18 01:51:24.340 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:51:24.340 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.340 -07 000000487 INF: FPGA: Recv ZSGSRD 35099 17-03-18 01:51:24.350 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.350 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.350 -07 000000576 INF: FPGA: Recv ZSGSRD 35099 17-03-18 01:51:24.360 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.360 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.360 -07 000000591 INF: FPGA: Recv ZSGSRD 35099 17-03-18 01:51:24.370 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.370 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.370 -07 000000424 INF: FPGA: Recv ZSGSRD 35107 17-03-18 01:51:24.380 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.380 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.380 -07 000000444 INF: FPGA: Recv ZSGSRD 35106 17-03-18 01:51:24.390 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.390 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.390 -07 000000576 INF: FPGA: Recv ZSGSRD 35101 17-03-18 01:51:24.400 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.400 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:24.400 -07 000000444 INF: FPGA: Recv ZSGSRD 35106 17-03-18 01:51:24.410 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.410 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:24.410 -07 000000576 INF: FPGA: Recv ZPIEZORD 30850 17-03-18 01:51:24.420 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:24.420 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.527 V. Piezo Error = -9.4 V. 17-03-18 01:51:24.420 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.8 um, Read 10 ADC samples: Avg = 35103 (-165.0 uncal um), Error = 0.8 uncal um, Median = 35103 (-165.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35099 (-164.9 uncal um), Max = 35107 (-165.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:24.420 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35103, posNoise = 4, negNoise = 4 17-03-18 01:51:24.420 -07 000000610 INF: Z Motor: After move to -0.165814, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:24.420 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms) 17-03-18 01:51:24.420 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:24.420 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:24.420 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:24.420 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:24.420 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:24.420 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:24.420 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:51:24.420 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:24.420 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:24.420 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:24.420 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:24.420 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:24.430 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:24.430 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:24.430 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:24.430 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:24.440 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms. 17-03-18 01:51:24.440 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 01:51:24.440 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms. 17-03-18 01:51:24.440 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 01:51:24.440 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36399 150\n [Camera] 17-03-18 01:51:24.649 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:24.959 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.993549, 17-03-18 01:51:25.039 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:25.039 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:25.039 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:25.039 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:25.039 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:25.039 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:25.039 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:25.039 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 01:51:25.039 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:25.039 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:25.228 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36399 777 17-03-18 01:51:25.378 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:25.408 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 01:51:25.408 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-18 01:51:25.408 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:25.418 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 01:51:25.418 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 01:51:25.418 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:25.418 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:51:25.418 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms. 17-03-18 01:51:25.418 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:25.428 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 01:51:25.568 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:25.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:25.568 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:25.568 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:25.568 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) start. 17-03-18 01:51:25.568 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:25.568 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:25.568 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:25.687 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:25.687 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:25.757 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:25.757 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:25.757 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36399 150' command took 2 ms to send, 1303 ms to get response, and 1314 ms overall 17-03-18 01:51:25.757 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880 17-03-18 01:51:25.757 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0068359375, Z-Position -0.16583247082337. ------ 17-03-18 01:51:25.757 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:25.757 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.17178 mm 17-03-18 01:51:25.757 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:25.767 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-18 01:51:25.767 -07 000000424 INF: Y Motor: Moving to 74.8526 mm, started at 74.0068 mm, delta = 0.8458 mm 17-03-18 01:51:25.767 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:25.767 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 37524, sync = True, waitForSettling = False) 17-03-18 01:51:25.767 -07 000000444 INF: Z Motor: Moving to -0.171774 mm, started at -0.165832 mm, distance = -5.94 um 17-03-18 01:51:25.767 -07 000000430 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:25.767 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:51:25.767 -07 000000626 INF: FPGA: Recv YRDPOS 151566 17-03-18 01:51:25.777 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:25.777 -07 000000424 INF: Y Motor: Encoder = 151566 = motor step 118410.9 = 74.0068 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:25.777 -07 000000424 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:25.777 -07 000000424 INF: Y Motor: Moving 1353 steps-32 17-03-18 01:51:25.777 -07 000000444 INF: FPGA: Xmit ZDACW 37524\n [Z Motor] 17-03-18 01:51:25.777 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 01:51:25.787 -07 000000591 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:51:25.787 -07 000000444 INF: FPGA: 'ZDACW 37524' command took 1 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 01:51:25.797 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:25.807 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:25.807 -07 000000430 INF: FPGA: Recv ZDACR 37524 17-03-18 01:51:25.817 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:51:25.817 -07 000000444 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet)) 17-03-18 01:51:25.947 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2988216424, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 01:51:25.947 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 01:51:25.947 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:25.947 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-18 01:51:25.947 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:51:25.987 -07 000000629 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:51:25.987 -07 000000591 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 220 ms overall 17-03-18 01:51:26.067 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 01:51:26.067 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 01:51:26.067 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:26.067 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-18 01:51:26.077 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 509 ms. 17-03-18 01:51:26.176 -07 000000487 INF: FPGA: Recv YMVTILE 17-03-18 01:51:26.176 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall 17-03-18 01:51:26.196 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:26.206 -07 000000444 INF: FPGA: Recv YRDPOS 153253 17-03-18 01:51:26.206 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:26.206 -07 000000424 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:26.206 -07 000000424 INF: Y Motor: Position error before settling (table move) = -45 encoder counts (-0.022 mm) 17-03-18 01:51:26.206 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.846 mm, average velocity = 2.120 mm/sec 17-03-18 01:51:27.005 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:27.005 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:27.155 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:27.155 -07 000000579 INF: FPGA: Recv YRDPOS 153253 17-03-18 01:51:27.165 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:27.165 -07 000000424 INF: Y Motor: Encoder = 153253 = motor step 119728.9 = 74.8306 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:27.175 -07 000000424 INF: Y Motor: After move to 74.852608, error = -0.022041, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:27.175 -07 000000424 INF: Y Motor: Position error after settling (table move) = -45 encoder counts (-0.022 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:27.175 -07 000000424 INF: Y Motor: Moved to 74.8306 after 1417 ms (table move) 17-03-18 01:51:27.184 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171774 mm (DAC = 37524) 17-03-18 01:51:27.184 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.184 -07 000000424 INF: FPGA: Recv ZSGSRD 36035 17-03-18 01:51:27.194 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:27.194 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.194 -07 000000424 INF: FPGA: Recv ZSGSRD 36027 17-03-18 01:51:27.204 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.204 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.204 -07 000000512 INF: FPGA: Recv ZSGSRD 36025 17-03-18 01:51:27.214 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.214 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.214 -07 000000512 INF: FPGA: Recv ZSGSRD 36030 17-03-18 01:51:27.224 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.224 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.224 -07 000000430 INF: FPGA: Recv ZSGSRD 36028 17-03-18 01:51:27.234 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.234 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.234 -07 000000626 INF: FPGA: Recv ZSGSRD 36035 17-03-18 01:51:27.244 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.244 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.244 -07 000000579 INF: FPGA: Recv ZSGSRD 36037 17-03-18 01:51:27.254 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.254 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.254 -07 000000626 INF: FPGA: Recv ZSGSRD 36028 17-03-18 01:51:27.264 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.264 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.264 -07 000000629 INF: FPGA: Recv ZSGSRD 36020 17-03-18 01:51:27.274 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.274 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:27.274 -07 000000430 INF: FPGA: Recv ZSGSRD 36023 17-03-18 01:51:27.284 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.284 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:27.284 -07 000000444 INF: FPGA: Recv ZPIEZORD 32100 17-03-18 01:51:27.294 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:27.294 -07 000000501 INF: Z Motor: Piezo is near 48.6 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.726 V. Piezo Error = -8.7 V. 17-03-18 01:51:27.294 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36029 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36028 (-170.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 36020 (-170.8 uncal um), Max = 36037 (-171.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 01:51:27.294 -07 000000501 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36029, posNoise = 8, negNoise = 9 17-03-18 01:51:27.294 -07 000000501 INF: Z Motor: After move to -0.171774, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:27.294 -07 000000501 INF: Z Motor: Settle wait time = 1421 ms, measure time = 108 ms (allowed 150 ms), total time = 1529 ms 17-03-18 01:51:27.294 -07 000000501 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:27.344 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms 17-03-18 01:51:27.344 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:27.344 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:27.344 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:27.344 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:27.344 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:27.344 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:51:27.344 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:27.344 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:27.344 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:51:27.354 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:27.354 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:51:27.364 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-18 01:51:27.364 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms. 17-03-18 01:51:27.364 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:51:27.414 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:51:27.714 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:51:27.714 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:51:27.714 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:51:27.714 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start. 17-03-18 01:51:27.753 -07 000000629 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:51:27.753 -07 000000512 INF: FPGA: Recv CAMSNAP 17-03-18 01:51:27.753 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 388 ms overall 17-03-18 01:51:27.843 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 01:51:27.843 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:27.843 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:51:27.843 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 01:51:27.853 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:27.853 -07 000000444 INF: Autofocus start 17-03-18 01:51:27.853 -07 000000444 INF: MeasureProfile start 17-03-18 01:51:27.853 -07 000000430 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:27.863 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:27.863 -07 000000512 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:51:27.863 -07 000000444 INF: MeasureProfile done 17-03-18 01:51:27.863 -07 000000444 INF: X=16 Z correction [um]=0.01042744 17-03-18 01:51:27.863 -07 000000444 INF: Autofocus finished 17-03-18 01:51:28.063 -07 000000629 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:51:28.063 -07 000000512 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:51:28.063 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83056640625, Z-position -0.17178129126664. ---------- 17-03-18 01:51:28.063 -07 000000610 INF: Cycle 92 Tile 19 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:28.073 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36039, sync = True, waitForSettling = True) 17-03-18 01:51:28.073 -07 000000610 INF: Z Motor: Moving to -0.164976 mm, started at -0.171781 mm, distance = 6.81 um 17-03-18 01:51:28.073 -07 000000610 INF: FPGA: Xmit ZDACW 36039\n [Z Motor] 17-03-18 01:51:28.073 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:51:28.083 -07 000000610 INF: FPGA: 'ZDACW 36039' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:28.083 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:28.083 -07 000000512 INF: FPGA: Recv ZDACR 36039 17-03-18 01:51:28.093 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.093 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:28.243 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.243 -07 000000629 INF: FPGA: Recv ZSGSRD 34973 17-03-18 01:51:28.252 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.252 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.252 -07 000000501 INF: FPGA: Recv ZSGSRD 34973 17-03-18 01:51:28.262 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.262 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.262 -07 000000579 INF: FPGA: Recv ZSGSRD 34971 17-03-18 01:51:28.272 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.272 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.272 -07 000000626 INF: FPGA: Recv ZSGSRD 34969 17-03-18 01:51:28.282 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.282 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.282 -07 000000629 INF: FPGA: Recv ZSGSRD 34974 17-03-18 01:51:28.292 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.292 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.292 -07 000000501 INF: FPGA: Recv ZSGSRD 34968 17-03-18 01:51:28.302 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.302 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.302 -07 000000430 INF: FPGA: Recv ZSGSRD 34972 17-03-18 01:51:28.312 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.312 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.312 -07 000000626 INF: FPGA: Recv ZSGSRD 34971 17-03-18 01:51:28.322 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.322 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.322 -07 000000629 INF: FPGA: Recv ZSGSRD 34971 17-03-18 01:51:28.332 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.332 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:28.332 -07 000000501 INF: FPGA: Recv ZSGSRD 34978 17-03-18 01:51:28.342 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.342 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:28.342 -07 000000579 INF: FPGA: Recv ZPIEZORD 30705 17-03-18 01:51:28.352 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:28.352 -07 000000610 INF: Z Motor: Piezo is near 45.6 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.499 V. Piezo Error = -9.4 V. 17-03-18 01:51:28.352 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.0 um, Read 10 ADC samples: Avg = 34972 (-164.1 uncal um), Error = 0.8 uncal um, Median = 34972 (-164.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 34968 (-164.1 uncal um), Max = 34978 (-164.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:28.352 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34972, posNoise = 6, negNoise = 4 17-03-18 01:51:28.352 -07 000000610 INF: Z Motor: After move to -0.164976, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:28.352 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms) 17-03-18 01:51:28.352 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:28.352 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:28.352 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:28.352 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:28.352 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:28.352 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:28.352 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:28.352 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:28.362 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:28.362 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:28.362 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:28.362 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:28.362 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:28.362 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:28.362 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 01:51:28.362 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:28.372 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 01:51:28.372 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:51:28.372 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 01:51:28.372 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:51:28.372 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 36216 150\n [Camera] 17-03-18 01:51:28.572 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:28.961 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:28.961 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:28.961 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:28.971 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:28.971 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:28.971 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:28.971 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:28.971 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:28.981 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:28.981 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) start. 17-03-18 01:51:29.161 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36216 777 17-03-18 01:51:29.301 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:29.350 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 01:51:29.350 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:51:29.350 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:29.350 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2952794160, 0x0, 418435064) end. Duration was 372 ms. 17-03-18 01:51:29.350 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms. 17-03-18 01:51:29.350 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:29.350 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:29.350 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 01:51:29.360 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:29.360 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms. 17-03-18 01:51:29.490 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:29.490 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:29.490 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:29.490 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:29.490 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:51:29.500 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:29.500 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:29.500 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:29.500 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:29.500 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) start. 17-03-18 01:51:29.680 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:29.690 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:29.690 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 36216 150' command took 2 ms to send, 1313 ms to get response, and 1317 ms overall 17-03-18 01:51:29.899 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 405 ms. 17-03-18 01:51:29.899 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms. 17-03-18 01:51:29.899 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:29.899 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 3023638688, 0x0, 418435064) end. Duration was 404 ms. 17-03-18 01:51:29.899 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms. 17-03-18 01:51:29.899 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:29.909 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:29.909 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 01:51:29.909 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 414 ms. 17-03-18 01:51:29.909 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-18 01:51:29.909 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 416 ms. 17-03-18 01:51:29.949 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms. 17-03-18 01:51:29.949 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-18 01:51:29.989 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms. 17-03-18 01:51:29.999 -07 000000610 INF: Move compensator for Bottom-surface imaging. 17-03-18 01:51:30.019 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator] 17-03-18 01:51:30.019 -07 000000444 INF: FPGA: Recv EMCUR 17-03-18 01:51:30.029 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 27 ms overall 17-03-18 01:51:30.029 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator] 17-03-18 01:51:30.319 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.951279, 17-03-18 01:51:30.528 -07 000000444 INF: FPGA: Recv EMIN 17-03-18 01:51:30.528 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 492 ms to get response, and 502 ms overall 17-03-18 01:51:30.528 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator] 17-03-18 01:51:30.528 -07 000000430 INF: FPGA: Recv EMCUR 17-03-18 01:51:30.538 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:30.538 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:51:30.538 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.83056640625, Z-Position -0.164990899032799. ------ 17-03-18 01:51:30.538 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:30.538 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13987 mm 17-03-18 01:51:30.538 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:30.538 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True) 17-03-18 01:51:30.538 -07 000000629 INF: Y Motor: Moving to 59.9126 mm, started at 74.8306 mm, delta = -14.9180 mm 17-03-18 01:51:30.538 -07 000000579 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:30.548 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 30556, sync = True, waitForSettling = False) 17-03-18 01:51:30.548 -07 000000430 INF: Z Motor: Moving to -0.139876 mm, started at -0.164991 mm, distance = 25.11 um 17-03-18 01:51:30.548 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:51:30.548 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:30.548 -07 000000626 INF: FPGA: Recv YRDPOS 153254 17-03-18 01:51:30.558 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:51:30.558 -07 000000629 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 01:51:30.558 -07 000000629 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:30.558 -07 000000629 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False 17-03-18 01:51:30.558 -07 000000629 INF: Y Motor: Moving to 122701 encoder counts 17-03-18 01:51:30.568 -07 000000430 INF: FPGA: Xmit ZDACW 30556\n [Z Motor] 17-03-18 01:51:30.568 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:51:30.578 -07 000000629 INF: FPGA: Xmit YMVTO 122701\n [Y Motor] 17-03-18 01:51:30.578 -07 000000430 INF: FPGA: 'ZDACW 30556' command took 0 ms to send, 0 ms to get response, and 28 ms overall 17-03-18 01:51:30.588 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:30.588 -07 000000444 INF: FPGA: Recv ZDACR 30556 17-03-18 01:51:30.598 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:51:30.598 -07 000000430 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet)) 17-03-18 01:51:30.758 -07 000000561 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:51:30.758 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 210 ms overall 17-03-18 01:51:31.995 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:31.995 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:32.195 -07 000000626 INF: FPGA: Recv YMVTO 122703 23903 17-03-18 01:51:32.195 -07 000000629 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1619 ms to get response, and 1645 ms overall 17-03-18 01:51:32.195 -07 000000629 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm) 17-03-18 01:51:32.195 -07 000000629 INF: Y Motor: To move from 74.831 to 59.913 (-14.918 mm) should take 23870 steps, but required 23903 steps (14.939 mm). Slippage = 0.021 mm (0.00%). 17-03-18 01:51:32.195 -07 000000629 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1645 ms, distance = 14.918 mm, average velocity = 9.069 mm/sec 17-03-18 01:51:35.040 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:35.040 -07 000000576 INF: FPGA: Recv YRDPOS 122697 17-03-18 01:51:35.050 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:35.050 -07 000000629 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:35.080 -07 000000629 INF: Y Motor: After move to 59.912609, error = -0.001965, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:35.080 -07 000000629 INF: Y Motor: Position error after settling = -4 encoder counts (-0.002 mm), Delta during settling = -6 counts (-0.003 mm) 17-03-18 01:51:35.080 -07 000000629 INF: Y Motor: Moved to 59.9106 after 4549 ms 17-03-18 01:51:35.090 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139876 mm (DAC = 30556) 17-03-18 01:51:35.090 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.090 -07 000000629 INF: FPGA: Recv ZSGSRD 31065 17-03-18 01:51:35.100 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:35.100 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.100 -07 000000629 INF: FPGA: Recv ZSGSRD 31065 17-03-18 01:51:35.110 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.110 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.110 -07 000000629 INF: FPGA: Recv ZSGSRD 31059 17-03-18 01:51:35.120 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.120 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.120 -07 000000444 INF: FPGA: Recv ZSGSRD 31061 17-03-18 01:51:35.130 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.130 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.130 -07 000000444 INF: FPGA: Recv ZSGSRD 31059 17-03-18 01:51:35.140 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.140 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.140 -07 000000629 INF: FPGA: Recv ZSGSRD 31068 17-03-18 01:51:35.150 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.150 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.150 -07 000000629 INF: FPGA: Recv ZSGSRD 31066 17-03-18 01:51:35.160 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.160 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.160 -07 000000629 INF: FPGA: Recv ZSGSRD 31067 17-03-18 01:51:35.170 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.170 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.170 -07 000000561 INF: FPGA: Recv ZSGSRD 31067 17-03-18 01:51:35.180 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:35.180 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:35.180 -07 000000561 INF: FPGA: Recv ZSGSRD 31063 17-03-18 01:51:35.189 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.189 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:35.189 -07 000000561 INF: FPGA: Recv ZPIEZORD 26626 17-03-18 01:51:35.199 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:35.199 -07 000000512 INF: Z Motor: Piezo is near 36.9 V (nominally 0 to 100 V), expect near 46.6 V, since DAC is at 4.663 V. Piezo Error = -9.7 V. 17-03-18 01:51:35.199 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.9 um, Read 10 ADC samples: Avg = 31064 (-139.1 uncal um), Error = 0.8 uncal um, Median = 31065 (-139.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 31059 (-139.1 uncal um), Max = 31068 (-139.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:51:35.199 -07 000000512 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31064, posNoise = 4, negNoise = 5 17-03-18 01:51:35.199 -07 000000512 INF: Z Motor: After move to -0.139876, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:35.199 -07 000000512 INF: Z Motor: Settle wait time = 4549 ms, measure time = 109 ms (allowed 150 ms), total time = 4658 ms 17-03-18 01:51:35.199 -07 000000512 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:35.249 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4713 ms 17-03-18 01:51:35.249 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:35.249 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:35.249 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:35.249 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:35.249 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:35.249 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:51:35.249 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:35.249 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:51:35.249 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074288, 1) start. 17-03-18 01:51:35.269 -07 000000576 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 20 ms. 17-03-18 01:51:35.269 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:51:35.279 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:35.279 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:51:35.279 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms. 17-03-18 01:51:35.279 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 31 ms. 17-03-18 01:51:35.289 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:51:35.329 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:51:35.629 -07 000000618 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:51:35.629 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:51:35.629 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:51:35.629 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) start. 17-03-18 01:51:35.669 -07 000000579 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:51:35.669 -07 000000618 INF: FPGA: Recv CAMSNAP 17-03-18 01:51:35.669 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 376 ms to get response, and 384 ms overall 17-03-18 01:51:35.689 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.937621, 17-03-18 01:51:35.748 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) end. Duration was 115 ms. 17-03-18 01:51:35.748 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:35.748 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:51:35.748 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 117 ms. 17-03-18 01:51:35.768 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:35.768 -07 000000480 INF: Image SNR check: start 17-03-18 01:51:35.768 -07 000000444 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:35.778 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:35.778 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:51:35.788 -07 000000480 INF: Image SNR check: pass [peak (Max-Min)=123.72] 17-03-18 01:51:35.788 -07 000000480 INF: Autofocus start 17-03-18 01:51:35.788 -07 000000480 INF: MeasureProfile start 17-03-18 01:51:35.798 -07 000000480 INF: MeasureProfile done 17-03-18 01:51:35.798 -07 000000480 INF: X=32 Z correction [um]=0.1299841 17-03-18 01:51:35.798 -07 000000480 INF: Autofocus finished 17-03-18 01:51:35.978 -07 000000480 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:51:35.978 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 205 ms overall 17-03-18 01:51:35.978 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91064453125, Z-position -0.139885077982797. ---------- 17-03-18 01:51:35.988 -07 000000610 INF: Cycle 92 Tile 1 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:35.988 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29096, sync = True, waitForSettling = True) 17-03-18 01:51:35.988 -07 000000610 INF: Z Motor: Moving to -0.133193 mm, started at -0.139885 mm, distance = 6.69 um 17-03-18 01:51:35.988 -07 000000610 INF: FPGA: Xmit ZDACW 29096\n [Z Motor] 17-03-18 01:51:35.988 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:51:35.998 -07 000000610 INF: FPGA: 'ZDACW 29096' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:35.998 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:35.998 -07 000000579 INF: FPGA: Recv ZDACR 29096 17-03-18 01:51:36.008 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.008 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:36.158 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.158 -07 000000444 INF: FPGA: Recv ZSGSRD 30022 17-03-18 01:51:36.168 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:36.168 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.168 -07 000000629 INF: FPGA: Recv ZSGSRD 30018 17-03-18 01:51:36.178 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.178 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.178 -07 000000626 INF: FPGA: Recv ZSGSRD 30017 17-03-18 01:51:36.188 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.188 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.188 -07 000000579 INF: FPGA: Recv ZSGSRD 30022 17-03-18 01:51:36.198 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.198 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.198 -07 000000576 INF: FPGA: Recv ZSGSRD 30033 17-03-18 01:51:36.208 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.208 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.208 -07 000000579 INF: FPGA: Recv ZSGSRD 30021 17-03-18 01:51:36.218 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.218 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.218 -07 000000480 INF: FPGA: Recv ZSGSRD 30023 17-03-18 01:51:36.228 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.228 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.228 -07 000000629 INF: FPGA: Recv ZSGSRD 30023 17-03-18 01:51:36.238 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.238 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.238 -07 000000576 INF: FPGA: Recv ZSGSRD 30023 17-03-18 01:51:36.248 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.248 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:36.248 -07 000000618 INF: FPGA: Recv ZSGSRD 30021 17-03-18 01:51:36.257 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.257 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:36.257 -07 000000444 INF: FPGA: Recv ZPIEZORD 25511 17-03-18 01:51:36.267 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:36.267 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.440 V. Piezo Error = -9.9 V. 17-03-18 01:51:36.267 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.2 um, Read 10 ADC samples: Avg = 30022 (-132.4 uncal um), Error = 0.8 uncal um, Median = 30022 (-132.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30017 (-132.4 uncal um), Max = 30033 (-132.5 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:51:36.267 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30022, posNoise = 11, negNoise = 5 17-03-18 01:51:36.267 -07 000000610 INF: Z Motor: After move to -0.133193, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:36.267 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 01:51:36.267 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:36.267 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:36.267 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:36.267 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:36.267 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:36.267 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:36.267 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:36.267 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:36.267 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:36.267 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:36.267 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 01:51:36.267 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) start. 17-03-18 01:51:36.277 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:36.277 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:36.287 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms. 17-03-18 01:51:36.287 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms. 17-03-18 01:51:36.287 -07 000000444 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 21 ms. 17-03-18 01:51:36.287 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:36.297 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:36.297 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:36.307 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms. 17-03-18 01:51:36.307 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 37 ms. 17-03-18 01:51:36.307 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 29273 150\n [Camera] 17-03-18 01:51:36.507 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:36.896 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:36.896 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:36.896 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:36.896 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:36.896 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start. 17-03-18 01:51:36.906 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:36.906 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:36.906 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:36.906 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:36.906 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start. 17-03-18 01:51:36.986 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:36.986 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:37.096 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29273 777 17-03-18 01:51:37.236 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:37.296 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 390 ms. 17-03-18 01:51:37.296 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:51:37.296 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:37.296 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:37.296 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 397 ms. 17-03-18 01:51:37.296 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 01:51:37.296 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:37.306 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:37.306 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:51:37.306 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:51:37.425 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:37.425 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:37.425 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:37.545 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:37.545 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:37.545 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:37.545 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:37.545 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start. 17-03-18 01:51:37.555 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:37.555 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:37.615 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:37.625 -07 000000629 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:37.625 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 29273 150' command took 2 ms to send, 1310 ms to get response, and 1315 ms overall 17-03-18 01:51:37.625 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133458 17-03-18 01:51:37.625 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13346 mm 17-03-18 01:51:37.625 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:37.625 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True) 17-03-18 01:51:37.625 -07 000000561 INF: Y Motor: Moving to 60.7426 mm, started at 59.9106 mm, delta = 0.8320 mm 17-03-18 01:51:37.625 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:37.625 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 29154, sync = True, waitForSettling = False) 17-03-18 01:51:37.625 -07 000000576 INF: Z Motor: Moving to -0.133458 mm, started at -0.133191 mm, distance = -0.27 um 17-03-18 01:51:37.625 -07 000000629 INF: FPGA: Recv YRDPOS 122697 17-03-18 01:51:37.635 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:51:37.635 -07 000000561 INF: Y Motor: Encoder = 122697 = motor step 95857.0 = 59.9106 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:37.635 -07 000000561 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:37.635 -07 000000561 INF: Y Motor: Moving 1331 steps2 17-03-18 01:51:37.635 -07 000000576 INF: FPGA: Xmit ZDACW 29154\n [Z Motor] 17-03-18 01:51:37.635 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:51:37.645 -07 000000576 INF: FPGA: 'ZDACW 29154' command took 1 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 01:51:37.645 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:37.655 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:37.655 -07 000000444 INF: FPGA: Recv ZDACR 29154 17-03-18 01:51:37.665 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:51:37.665 -07 000000576 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet)) 17-03-18 01:51:37.944 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 397 ms. 17-03-18 01:51:37.944 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms. 17-03-18 01:51:37.944 -07 000000579 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:37.944 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 402 ms. 17-03-18 01:51:37.944 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 01:51:37.944 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:37.954 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:37.954 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:37.954 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 524 ms. 17-03-18 01:51:37.964 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms. 17-03-18 01:51:38.014 -07 000000576 INF: FPGA: Recv YMVTILE 17-03-18 01:51:38.014 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 01:51:38.054 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:38.054 -07 000000444 INF: FPGA: Recv YRDPOS 124380 17-03-18 01:51:38.064 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:38.064 -07 000000561 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:38.064 -07 000000561 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm) 17-03-18 01:51:38.064 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.832 mm, average velocity = 2.144 mm/sec 17-03-18 01:51:39.012 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:39.012 -07 000000576 INF: FPGA: Recv YRDPOS 124380 17-03-18 01:51:39.022 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:39.022 -07 000000561 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:39.042 -07 000000561 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:39.042 -07 000000561 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:39.042 -07 000000561 INF: Y Motor: Moved to 60.7324 after 1423 ms (table move) 17-03-18 01:51:39.052 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133458 mm (DAC = 29154) 17-03-18 01:51:39.052 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.052 -07 000000618 INF: FPGA: Recv ZSGSRD 30064 17-03-18 01:51:39.062 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:39.062 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.062 -07 000000447 INF: FPGA: Recv ZSGSRD 30068 17-03-18 01:51:39.072 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.072 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.072 -07 000000591 INF: FPGA: Recv ZSGSRD 30055 17-03-18 01:51:39.082 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.082 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.082 -07 000000444 INF: FPGA: Recv ZSGSRD 30065 17-03-18 01:51:39.092 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.092 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.092 -07 000000591 INF: FPGA: Recv ZSGSRD 30063 17-03-18 01:51:39.102 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.102 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.102 -07 000000444 INF: FPGA: Recv ZSGSRD 30066 17-03-18 01:51:39.112 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.112 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.112 -07 000000591 INF: FPGA: Recv ZSGSRD 30058 17-03-18 01:51:39.122 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.122 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.122 -07 000000592 INF: FPGA: Recv ZSGSRD 30059 17-03-18 01:51:39.132 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.132 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.132 -07 000000591 INF: FPGA: Recv ZSGSRD 30071 17-03-18 01:51:39.142 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.142 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.142 -07 000000592 INF: FPGA: Recv ZSGSRD 30070 17-03-18 01:51:39.152 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.152 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:39.152 -07 000000591 INF: FPGA: Recv ZPIEZORD 25580 17-03-18 01:51:39.162 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.162 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.5 V, since DAC is at 4.449 V. Piezo Error = -9.8 V. 17-03-18 01:51:39.162 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.5 um, Read 10 ADC samples: Avg = 30064 (-132.7 uncal um), Error = 0.8 uncal um, Median = 30064 (-132.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 30055 (-132.6 uncal um), Max = 30071 (-132.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 01:51:39.162 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30064, posNoise = 7, negNoise = 9 17-03-18 01:51:39.162 -07 000000610 INF: Z Motor: After move to -0.133458, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:39.162 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 109 ms (allowed 150 ms), total time = 1535 ms 17-03-18 01:51:39.162 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:39.212 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1587 ms 17-03-18 01:51:39.212 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:39.212 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.133460865841036. ---------- 17-03-18 01:51:39.212 -07 000000610 INF: Cycle 92 Tile 2 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:39.212 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28977, sync = True, waitForSettling = True) 17-03-18 01:51:39.212 -07 000000610 INF: Z Motor: Moving to -0.132648 mm, started at -0.133461 mm, distance = 0.81 um 17-03-18 01:51:39.212 -07 000000610 INF: FPGA: Xmit ZDACW 28977\n [Z Motor] 17-03-18 01:51:39.212 -07 000000629 INF: FPGA: Recv ZDACW 17-03-18 01:51:39.222 -07 000000610 INF: FPGA: 'ZDACW 28977' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:51:39.222 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:39.222 -07 000000626 INF: FPGA: Recv ZDACR 28977 17-03-18 01:51:39.232 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.232 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:39.382 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.382 -07 000000480 INF: FPGA: Recv ZSGSRD 29943 17-03-18 01:51:39.392 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:39.392 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.392 -07 000000579 INF: FPGA: Recv ZSGSRD 29943 17-03-18 01:51:39.402 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.402 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.402 -07 000000444 INF: FPGA: Recv ZSGSRD 29933 17-03-18 01:51:39.412 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.412 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.412 -07 000000579 INF: FPGA: Recv ZSGSRD 29939 17-03-18 01:51:39.422 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.422 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.422 -07 000000444 INF: FPGA: Recv ZSGSRD 29940 17-03-18 01:51:39.432 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.432 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.432 -07 000000591 INF: FPGA: Recv ZSGSRD 29937 17-03-18 01:51:39.442 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.442 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.442 -07 000000444 INF: FPGA: Recv ZSGSRD 29937 17-03-18 01:51:39.452 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.452 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.452 -07 000000591 INF: FPGA: Recv ZSGSRD 29939 17-03-18 01:51:39.461 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.461 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.461 -07 000000444 INF: FPGA: Recv ZSGSRD 29945 17-03-18 01:51:39.471 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.471 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:39.471 -07 000000591 INF: FPGA: Recv ZSGSRD 29932 17-03-18 01:51:39.481 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.481 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:39.481 -07 000000576 INF: FPGA: Recv ZPIEZORD 25391 17-03-18 01:51:39.491 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:39.491 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.422 V. Piezo Error = -10.0 V. 17-03-18 01:51:39.491 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.6 um, Read 10 ADC samples: Avg = 29939 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29939 (-131.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29932 (-131.8 uncal um), Max = 29945 (-131.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:51:39.491 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29939, posNoise = 6, negNoise = 7 17-03-18 01:51:39.491 -07 000000610 INF: Z Motor: After move to -0.132648, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:39.491 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 01:51:39.491 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:39.491 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:39.491 -07 000000487 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:39.491 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:39.491 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:39.491 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:39.491 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:39.491 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:39.491 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:39.491 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:39.491 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:39.491 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:39.491 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:39.491 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:39.501 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:51:39.501 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:39.511 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:51:39.511 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:51:39.511 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:51:39.511 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:51:39.511 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 29154 150\n [Camera] 17-03-18 01:51:39.711 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:40.110 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:40.110 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:40.110 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:40.110 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:40.110 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:40.110 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:40.110 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:40.110 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:40.120 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:40.120 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:51:40.300 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29154 777 17-03-18 01:51:40.450 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929 17-03-18 01:51:40.500 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 380 ms. 17-03-18 01:51:40.500 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 01:51:40.500 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:40.500 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 388 ms. 17-03-18 01:51:40.500 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 01:51:40.500 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:40.500 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:40.510 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:40.510 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:51:40.510 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 01:51:40.639 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:40.639 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:40.639 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:40.639 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:40.639 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:40.639 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:40.749 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:40.749 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 01:51:40.759 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:40.759 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:40.829 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:40.829 -07 000000592 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:40.829 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 29154 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:51:40.829 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:51:40.829 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 3 at Y-position 60.732421875, Z-Position -0.132657839323316. ------ 17-03-18 01:51:40.839 -07 000000618 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:40.839 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13933 mm 17-03-18 01:51:40.839 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:40.839 -07 000000591 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:40.839 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True) 17-03-18 01:51:40.839 -07 000000480 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm 17-03-18 01:51:40.839 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 30437, sync = True, waitForSettling = False) 17-03-18 01:51:40.839 -07 000000592 INF: Z Motor: Moving to -0.139332 mm, started at -0.132658 mm, distance = -6.67 um 17-03-18 01:51:40.849 -07 000000618 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:40.849 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:40.849 -07 000000579 INF: FPGA: Recv YRDPOS 124380 17-03-18 01:51:40.859 -07 000000592 INF: FPGA: Xmit ZDACW 30437\n [Z Motor] 17-03-18 01:51:40.859 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 01:51:40.859 -07 000000480 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:40.859 -07 000000480 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:40.859 -07 000000480 INF: Y Motor: Moving 1344 steps-21 17-03-18 01:51:40.859 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 01:51:40.869 -07 000000618 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:51:40.869 -07 000000592 INF: FPGA: 'ZDACW 30437' command took 0 ms to send, 0 ms to get response, and 25 ms overall 17-03-18 01:51:40.879 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:40.889 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:40.889 -07 000000629 INF: FPGA: Recv ZDACR 30437 17-03-18 01:51:40.899 -07 000000592 INF: FPGA: 'ZDACR' command took 1 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:51:40.899 -07 000000592 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet)) 17-03-18 01:51:41.068 -07 000000592 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:51:41.068 -07 000000618 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 199 ms to get response, and 229 ms overall 17-03-18 01:51:41.078 -07 000000447 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.014009, 17-03-18 01:51:41.148 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 01:51:41.148 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 01:51:41.148 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:41.148 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 392 ms. 17-03-18 01:51:41.148 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:51:41.148 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:41.148 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:41.148 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 514 ms. 17-03-18 01:51:41.148 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:41.158 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 519 ms. 17-03-18 01:51:41.248 -07 000000592 INF: FPGA: Recv YMVTILE 17-03-18 01:51:41.248 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall 17-03-18 01:51:41.298 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:41.298 -07 000000579 INF: FPGA: Recv YRDPOS 126081 17-03-18 01:51:41.308 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:41.308 -07 000000480 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:41.308 -07 000000480 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 01:51:41.308 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.840 mm, average velocity = 2.127 mm/sec 17-03-18 01:51:41.977 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:41.977 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:42.256 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:42.256 -07 000000618 INF: FPGA: Recv YRDPOS 126082 17-03-18 01:51:42.266 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:42.266 -07 000000480 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:42.286 -07 000000480 INF: Y Motor: After move to 61.572609, error = -0.009132, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:42.286 -07 000000480 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:51:42.286 -07 000000480 INF: Y Motor: Moved to 61.5635 after 1453 ms (table move) 17-03-18 01:51:42.296 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139332 mm (DAC = 30437) 17-03-18 01:51:42.296 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.296 -07 000000579 INF: FPGA: Recv ZSGSRD 30977 17-03-18 01:51:42.306 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.306 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.306 -07 000000480 INF: FPGA: Recv ZSGSRD 30980 17-03-18 01:51:42.316 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.316 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.316 -07 000000618 INF: FPGA: Recv ZSGSRD 30985 17-03-18 01:51:42.326 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.326 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.326 -07 000000447 INF: FPGA: Recv ZSGSRD 30983 17-03-18 01:51:42.336 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.336 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.336 -07 000000592 INF: FPGA: Recv ZSGSRD 30978 17-03-18 01:51:42.346 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.346 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.346 -07 000000576 INF: FPGA: Recv ZSGSRD 30986 17-03-18 01:51:42.356 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.356 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.356 -07 000000447 INF: FPGA: Recv ZSGSRD 30974 17-03-18 01:51:42.366 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.366 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.366 -07 000000480 INF: FPGA: Recv ZSGSRD 30977 17-03-18 01:51:42.376 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.376 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.376 -07 000000447 INF: FPGA: Recv ZSGSRD 30978 17-03-18 01:51:42.386 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.386 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:42.386 -07 000000480 INF: FPGA: Recv ZSGSRD 30981 17-03-18 01:51:42.396 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.396 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:42.396 -07 000000618 INF: FPGA: Recv ZPIEZORD 26792 17-03-18 01:51:42.406 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:42.406 -07 000000626 INF: Z Motor: Piezo is near 37.2 V (nominally 0 to 100 V), expect near 46.4 V, since DAC is at 4.644 V. Piezo Error = -9.2 V. 17-03-18 01:51:42.406 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.3 um, Read 10 ADC samples: Avg = 30980 (-138.5 uncal um), Error = 0.8 uncal um, Median = 30979 (-138.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30974 (-138.5 uncal um), Max = 30986 (-138.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:51:42.406 -07 000000626 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30980, posNoise = 6, negNoise = 6 17-03-18 01:51:42.406 -07 000000626 INF: Z Motor: After move to -0.139332, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:42.406 -07 000000626 INF: Z Motor: Settle wait time = 1456 ms, measure time = 110 ms (allowed 150 ms), total time = 1566 ms 17-03-18 01:51:42.406 -07 000000626 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:42.446 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1609 ms 17-03-18 01:51:42.446 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:42.446 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:42.446 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:42.446 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:42.446 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:51:42.446 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:42.446 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:42.446 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:42.446 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:51:42.456 -07 000000579 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:42.456 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:51:42.466 -07 000000579 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-18 01:51:42.466 -07 000000579 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms. 17-03-18 01:51:42.466 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:51:42.516 -07 000000447 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:51:42.805 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:51:42.815 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:51:42.815 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:51:42.815 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start. 17-03-18 01:51:42.845 -07 000000480 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:51:42.855 -07 000000576 INF: FPGA: Recv CAMSNAP 17-03-18 01:51:42.855 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 386 ms overall 17-03-18 01:51:42.935 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 124 ms. 17-03-18 01:51:42.935 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:42.935 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:51:42.935 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 126 ms. 17-03-18 01:51:42.955 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:42.955 -07 000000444 INF: Autofocus start 17-03-18 01:51:42.955 -07 000000444 INF: MeasureProfile start 17-03-18 01:51:42.955 -07 000000576 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:42.965 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:42.965 -07 000000447 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:51:42.965 -07 000000444 INF: MeasureProfile done 17-03-18 01:51:42.965 -07 000000444 INF: X=-48 Z correction [um]=-0.2370583 17-03-18 01:51:42.965 -07 000000444 INF: Autofocus finished 17-03-18 01:51:43.165 -07 000000579 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:51:43.165 -07 000000447 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:51:43.165 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.5634765625, Z-position -0.139345444162889. ---------- 17-03-18 01:51:43.165 -07 000000610 INF: Cycle 92 Tile 3 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:43.175 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28898, sync = True, waitForSettling = True) 17-03-18 01:51:43.175 -07 000000610 INF: Z Motor: Moving to -0.132287 mm, started at -0.139345 mm, distance = 7.06 um 17-03-18 01:51:43.175 -07 000000610 INF: FPGA: Xmit ZDACW 28898\n [Z Motor] 17-03-18 01:51:43.175 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 01:51:43.185 -07 000000610 INF: FPGA: 'ZDACW 28898' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:43.185 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:43.185 -07 000000576 INF: FPGA: Recv ZDACR 28898 17-03-18 01:51:43.194 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.194 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:43.344 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.344 -07 000000447 INF: FPGA: Recv ZSGSRD 29881 17-03-18 01:51:43.354 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:43.354 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.354 -07 000000592 INF: FPGA: Recv ZSGSRD 29883 17-03-18 01:51:43.364 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.364 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.364 -07 000000480 INF: FPGA: Recv ZSGSRD 29880 17-03-18 01:51:43.374 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.374 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.374 -07 000000618 INF: FPGA: Recv ZSGSRD 29884 17-03-18 01:51:43.384 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.384 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.384 -07 000000447 INF: FPGA: Recv ZSGSRD 29877 17-03-18 01:51:43.394 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.394 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.394 -07 000000592 INF: FPGA: Recv ZSGSRD 29884 17-03-18 01:51:43.404 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.404 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.404 -07 000000480 INF: FPGA: Recv ZSGSRD 29887 17-03-18 01:51:43.414 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.414 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.414 -07 000000576 INF: FPGA: Recv ZSGSRD 29879 17-03-18 01:51:43.424 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.424 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.424 -07 000000579 INF: FPGA: Recv ZSGSRD 29882 17-03-18 01:51:43.434 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.434 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:43.434 -07 000000444 INF: FPGA: Recv ZSGSRD 29878 17-03-18 01:51:43.444 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.444 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:43.444 -07 000000576 INF: FPGA: Recv ZPIEZORD 25366 17-03-18 01:51:43.454 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:43.454 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.410 V. Piezo Error = -9.9 V. 17-03-18 01:51:43.454 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29882 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29882 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29877 (-131.5 uncal um), Max = 29887 (-131.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:51:43.454 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29882, posNoise = 5, negNoise = 5 17-03-18 01:51:43.454 -07 000000610 INF: Z Motor: After move to -0.132287, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:43.454 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 01:51:43.454 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:43.454 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:43.454 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:43.454 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:43.454 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:43.454 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:43.454 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:43.454 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:43.454 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:43.454 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:43.454 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:43.454 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:43.464 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:43.464 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:43.464 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:43.464 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:43.474 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 01:51:43.474 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:51:43.474 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms. 17-03-18 01:51:43.474 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:51:43.474 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 29075 150\n [Camera] 17-03-18 01:51:43.674 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:44.063 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:44.063 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:44.073 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:44.073 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:44.073 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:44.073 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:44.073 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:44.073 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:44.073 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:44.073 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:51:44.253 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29075 777 17-03-18 01:51:44.402 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:44.472 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 01:51:44.472 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 01:51:44.472 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:44.472 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 392 ms. 17-03-18 01:51:44.472 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:51:44.472 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:44.472 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:44.472 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:51:44.472 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:44.482 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms. 17-03-18 01:51:44.592 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:44.592 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:44.592 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:44.592 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:44.592 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:51:44.592 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:44.592 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:44.602 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:44.602 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:44.602 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 01:51:44.782 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:44.782 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:44.782 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 29075 150' command took 2 ms to send, 1308 ms to get response, and 1314 ms overall 17-03-18 01:51:44.792 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132655 17-03-18 01:51:44.792 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13266 mm 17-03-18 01:51:44.792 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:44.792 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True) 17-03-18 01:51:44.792 -07 000000626 INF: Y Motor: Moving to 62.4026 mm, started at 61.5635 mm, delta = 0.8391 mm 17-03-18 01:51:44.792 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:44.792 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28979, sync = True, waitForSettling = False) 17-03-18 01:51:44.792 -07 000000591 INF: Z Motor: Moving to -0.132657 mm, started at -0.132292 mm, distance = -0.37 um 17-03-18 01:51:44.792 -07 000000487 INF: FPGA: Recv YRDPOS 126082 17-03-18 01:51:44.801 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:44.801 -07 000000626 INF: Y Motor: Encoder = 126082 = motor step 98501.6 = 61.5635 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:44.801 -07 000000626 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:44.801 -07 000000626 INF: Y Motor: Moving 1343 steps-20 17-03-18 01:51:44.801 -07 000000591 INF: FPGA: Xmit ZDACW 28979\n [Z Motor] 17-03-18 01:51:44.801 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 01:51:44.811 -07 000000591 INF: FPGA: 'ZDACW 28979' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 01:51:44.811 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:44.821 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:44.821 -07 000000480 INF: FPGA: Recv ZDACR 28979 17-03-18 01:51:44.831 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:51:44.831 -07 000000591 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet)) 17-03-18 01:51:44.981 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 388 ms. 17-03-18 01:51:44.981 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms. 17-03-18 01:51:44.981 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:44.991 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 393 ms. 17-03-18 01:51:44.991 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-18 01:51:44.991 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:44.991 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:44.991 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 01:51:44.991 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:51:45.001 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 399 ms. 17-03-18 01:51:45.181 -07 000000629 INF: FPGA: Recv YMVTILE 17-03-18 01:51:45.181 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 01:51:45.231 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:45.231 -07 000000444 INF: FPGA: Recv YRDPOS 127785 17-03-18 01:51:45.241 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:45.241 -07 000000626 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:45.241 -07 000000626 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm) 17-03-18 01:51:45.241 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.839 mm, average velocity = 2.163 mm/sec 17-03-18 01:51:46.189 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:46.189 -07 000000487 INF: FPGA: Recv YRDPOS 127785 17-03-18 01:51:46.199 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:46.199 -07 000000626 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:46.219 -07 000000626 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:46.219 -07 000000626 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:46.219 -07 000000626 INF: Y Motor: Moved to 62.3950 after 1432 ms (table move) 17-03-18 01:51:46.219 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132657 mm (DAC = 28979) 17-03-18 01:51:46.229 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.229 -07 000000447 INF: FPGA: Recv ZSGSRD 29953 17-03-18 01:51:46.239 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:46.239 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.239 -07 000000592 INF: FPGA: Recv ZSGSRD 29926 17-03-18 01:51:46.249 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.249 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.249 -07 000000501 INF: FPGA: Recv ZSGSRD 29936 17-03-18 01:51:46.259 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.259 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.259 -07 000000512 INF: FPGA: Recv ZSGSRD 29937 17-03-18 01:51:46.269 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.269 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.269 -07 000000606 INF: FPGA: Recv ZSGSRD 29943 17-03-18 01:51:46.279 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.279 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.279 -07 000000591 INF: FPGA: Recv ZSGSRD 29938 17-03-18 01:51:46.289 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.289 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.289 -07 000000467 INF: FPGA: Recv ZSGSRD 29939 17-03-18 01:51:46.299 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.299 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.299 -07 000000501 INF: FPGA: Recv ZSGSRD 29940 17-03-18 01:51:46.309 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.309 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.309 -07 000000480 INF: FPGA: Recv ZSGSRD 29947 17-03-18 01:51:46.319 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.319 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.319 -07 000000618 INF: FPGA: Recv ZSGSRD 29946 17-03-18 01:51:46.329 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.329 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:46.329 -07 000000447 INF: FPGA: Recv ZPIEZORD 25482 17-03-18 01:51:46.339 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.339 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.422 V. Piezo Error = -9.8 V. 17-03-18 01:51:46.339 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29940 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29940 (-131.9 uncal um), StdDev = 7 (0.0 uncal um), Range = 27 (0.2 uncal um), Min = 29926 (-131.8 uncal um), Max = 29953 (-132.0 uncal um), Pos Noise = 13 (0.1 uncal um), Neg Noise = 14 (0.1 uncal um) 17-03-18 01:51:46.339 -07 000000610 INF: Z Motor: ADC noise = 14, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29940, posNoise = 13, negNoise = 14 17-03-18 01:51:46.339 -07 000000610 INF: Z Motor: After move to -0.132657, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:46.339 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 111 ms (allowed 150 ms), total time = 1544 ms 17-03-18 01:51:46.339 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:46.379 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1588 ms 17-03-18 01:51:46.379 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:46.379 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.132664263535458. ---------- 17-03-18 01:51:46.379 -07 000000610 INF: Cycle 92 Tile 4 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:46.379 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28802, sync = True, waitForSettling = True) 17-03-18 01:51:46.379 -07 000000610 INF: Z Motor: Moving to -0.131847 mm, started at -0.132664 mm, distance = 0.82 um 17-03-18 01:51:46.379 -07 000000610 INF: FPGA: Xmit ZDACW 28802\n [Z Motor] 17-03-18 01:51:46.379 -07 000000424 INF: FPGA: Recv ZDACW 17-03-18 01:51:46.389 -07 000000610 INF: FPGA: 'ZDACW 28802' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:46.389 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:46.389 -07 000000579 INF: FPGA: Recv ZDACR 28802 17-03-18 01:51:46.398 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.398 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:46.438 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.996267, 17-03-18 01:51:46.548 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.548 -07 000000606 INF: FPGA: Recv ZSGSRD 29822 17-03-18 01:51:46.558 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:46.558 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.558 -07 000000444 INF: FPGA: Recv ZSGSRD 29817 17-03-18 01:51:46.568 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.568 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.568 -07 000000447 INF: FPGA: Recv ZSGSRD 29814 17-03-18 01:51:46.578 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.578 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.578 -07 000000501 INF: FPGA: Recv ZSGSRD 29810 17-03-18 01:51:46.588 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.588 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.588 -07 000000606 INF: FPGA: Recv ZSGSRD 29806 17-03-18 01:51:46.598 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.598 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.598 -07 000000480 INF: FPGA: Recv ZSGSRD 29819 17-03-18 01:51:46.608 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.608 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.608 -07 000000576 INF: FPGA: Recv ZSGSRD 29810 17-03-18 01:51:46.618 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.618 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.618 -07 000000591 INF: FPGA: Recv ZSGSRD 29815 17-03-18 01:51:46.628 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.628 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.628 -07 000000606 INF: FPGA: Recv ZSGSRD 29817 17-03-18 01:51:46.638 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.638 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:46.638 -07 000000444 INF: FPGA: Recv ZSGSRD 29815 17-03-18 01:51:46.648 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.648 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:46.648 -07 000000576 INF: FPGA: Recv ZPIEZORD 25342 17-03-18 01:51:46.658 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:46.658 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.395 V. Piezo Error = -9.8 V. 17-03-18 01:51:46.658 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29814 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29815 (-131.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29806 (-131.0 uncal um), Max = 29822 (-131.1 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:51:46.658 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29814, posNoise = 8, negNoise = 8 17-03-18 01:51:46.658 -07 000000610 INF: Z Motor: After move to -0.131847, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:46.658 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 01:51:46.658 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:46.658 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:46.658 -07 000000444 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:46.658 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:46.658 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:46.658 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:46.658 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:46.658 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:51:46.658 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:46.658 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:46.658 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:46.658 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:46.668 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:46.668 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:46.668 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 01:51:46.668 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:46.678 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 01:51:46.678 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 01:51:46.678 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 01:51:46.678 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 01:51:46.678 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28979 150\n [Camera] 17-03-18 01:51:46.888 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:46.967 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:46.967 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:47.277 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:47.277 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:47.277 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:47.277 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:47.277 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 01:51:47.277 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:47.277 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:47.277 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:47.277 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:47.277 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 01:51:47.466 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28979 777 17-03-18 01:51:47.616 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:47.666 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 387 ms. 17-03-18 01:51:47.666 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 01:51:47.666 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:47.666 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 391 ms. 17-03-18 01:51:47.666 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 01:51:47.666 -07 000000430 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:47.676 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:47.676 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:47.676 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:51:47.676 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 01:51:47.806 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:47.806 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:47.806 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:47.806 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:47.806 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 01:51:47.806 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:47.806 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:47.806 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:47.806 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:47.806 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 01:51:47.996 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:47.996 -07 000000591 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:47.996 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28979 150' command took 9 ms to send, 1306 ms to get response, and 1321 ms overall 17-03-18 01:51:47.996 -07 000000610 INF: Skipping AutoFocus in Tile 5: adopting Best-Z from the cache: -0.132546 17-03-18 01:51:47.996 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13255 mm 17-03-18 01:51:47.996 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:48.005 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True) 17-03-18 01:51:48.005 -07 000000480 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm 17-03-18 01:51:48.005 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:48.005 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28955, sync = True, waitForSettling = False) 17-03-18 01:51:48.005 -07 000000576 INF: Z Motor: Moving to -0.132547 mm, started at -0.131855 mm, distance = -0.69 um 17-03-18 01:51:48.005 -07 000000430 INF: FPGA: Recv YRDPOS 127785 17-03-18 01:51:48.015 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:48.015 -07 000000480 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:48.015 -07 000000480 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:48.015 -07 000000480 INF: Y Motor: Moving 1340 steps-16 17-03-18 01:51:48.015 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:48.025 -07 000000576 INF: FPGA: Xmit ZDACW 28955\n [Z Motor] 17-03-18 01:51:48.025 -07 000000591 INF: FPGA: Recv ZDACW 17-03-18 01:51:48.035 -07 000000576 INF: FPGA: 'ZDACW 28955' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:51:48.035 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:48.035 -07 000000591 INF: FPGA: Recv ZDACR 28955 17-03-18 01:51:48.045 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:48.045 -07 000000576 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet)) 17-03-18 01:51:48.205 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 403 ms. 17-03-18 01:51:48.205 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 01:51:48.205 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:48.215 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 402 ms. 17-03-18 01:51:48.215 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 403 ms. 17-03-18 01:51:48.215 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:48.215 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:48.215 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms. 17-03-18 01:51:48.215 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:48.225 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms. 17-03-18 01:51:48.385 -07 000000606 INF: FPGA: Recv YMVTILE 17-03-18 01:51:48.385 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall 17-03-18 01:51:48.435 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:48.435 -07 000000591 INF: FPGA: Recv YRDPOS 129481 17-03-18 01:51:48.445 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:48.445 -07 000000480 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:48.445 -07 000000480 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm) 17-03-18 01:51:48.445 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.216 mm/sec 17-03-18 01:51:49.393 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:49.393 -07 000000447 INF: FPGA: Recv YRDPOS 129482 17-03-18 01:51:49.403 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:49.403 -07 000000480 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:49.423 -07 000000480 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:49.423 -07 000000480 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:51:49.423 -07 000000480 INF: Y Motor: Moved to 63.2236 after 1426 ms (table move) 17-03-18 01:51:49.423 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132547 mm (DAC = 28955) 17-03-18 01:51:49.423 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.433 -07 000000430 INF: FPGA: Recv ZSGSRD 29932 17-03-18 01:51:49.433 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall 17-03-18 01:51:49.433 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.433 -07 000000447 INF: FPGA: Recv ZSGSRD 29927 17-03-18 01:51:49.443 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:49.443 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.443 -07 000000606 INF: FPGA: Recv ZSGSRD 29920 17-03-18 01:51:49.453 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.453 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.453 -07 000000480 INF: FPGA: Recv ZSGSRD 29927 17-03-18 01:51:49.463 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.463 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.463 -07 000000501 INF: FPGA: Recv ZSGSRD 29926 17-03-18 01:51:49.473 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.473 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.473 -07 000000480 INF: FPGA: Recv ZSGSRD 29927 17-03-18 01:51:49.483 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.483 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.483 -07 000000430 INF: FPGA: Recv ZSGSRD 29921 17-03-18 01:51:49.493 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.493 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.493 -07 000000606 INF: FPGA: Recv ZSGSRD 29916 17-03-18 01:51:49.503 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.503 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.503 -07 000000430 INF: FPGA: Recv ZSGSRD 29923 17-03-18 01:51:49.513 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.513 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.513 -07 000000591 INF: FPGA: Recv ZSGSRD 29925 17-03-18 01:51:49.523 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.523 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:49.523 -07 000000447 INF: FPGA: Recv ZPIEZORD 25503 17-03-18 01:51:49.533 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.533 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.418 V. Piezo Error = -9.7 V. 17-03-18 01:51:49.533 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.5 um, Read 10 ADC samples: Avg = 29924 (-131.8 uncal um), Error = 0.8 uncal um, Median = 29926 (-131.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29916 (-131.7 uncal um), Max = 29932 (-131.8 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:51:49.533 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29924, posNoise = 8, negNoise = 8 17-03-18 01:51:49.533 -07 000000610 INF: Z Motor: After move to -0.132547, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:49.533 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 101 ms (allowed 150 ms), total time = 1529 ms 17-03-18 01:51:49.533 -07 000000610 INF: Z Motor: Waiting extra 49 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:49.583 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1581 ms 17-03-18 01:51:49.583 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:49.583 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.13256147614119. ---------- 17-03-18 01:51:49.583 -07 000000610 INF: Cycle 92 Tile 5 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:49.583 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28778, sync = True, waitForSettling = True) 17-03-18 01:51:49.583 -07 000000610 INF: Z Motor: Moving to -0.131737 mm, started at -0.132561 mm, distance = 0.82 um 17-03-18 01:51:49.583 -07 000000610 INF: FPGA: Xmit ZDACW 28778\n [Z Motor] 17-03-18 01:51:49.583 -07 000000430 INF: FPGA: Recv ZDACW 17-03-18 01:51:49.593 -07 000000610 INF: FPGA: 'ZDACW 28778' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:51:49.593 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:49.593 -07 000000591 INF: FPGA: Recv ZDACR 28778 17-03-18 01:51:49.602 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.602 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:49.752 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.752 -07 000000576 INF: FPGA: Recv ZSGSRD 29805 17-03-18 01:51:49.762 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:49.762 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.762 -07 000000501 INF: FPGA: Recv ZSGSRD 29801 17-03-18 01:51:49.772 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.772 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.772 -07 000000606 INF: FPGA: Recv ZSGSRD 29795 17-03-18 01:51:49.782 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.782 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.782 -07 000000444 INF: FPGA: Recv ZSGSRD 29794 17-03-18 01:51:49.792 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.792 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.792 -07 000000430 INF: FPGA: Recv ZSGSRD 29792 17-03-18 01:51:49.802 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.802 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.802 -07 000000480 INF: FPGA: Recv ZSGSRD 29795 17-03-18 01:51:49.812 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.812 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.812 -07 000000606 INF: FPGA: Recv ZSGSRD 29795 17-03-18 01:51:49.822 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.822 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.822 -07 000000444 INF: FPGA: Recv ZSGSRD 29802 17-03-18 01:51:49.832 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.832 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.832 -07 000000447 INF: FPGA: Recv ZSGSRD 29806 17-03-18 01:51:49.842 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.842 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:49.842 -07 000000591 INF: FPGA: Recv ZSGSRD 29791 17-03-18 01:51:49.852 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.852 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:49.852 -07 000000430 INF: FPGA: Recv ZPIEZORD 25314 17-03-18 01:51:49.862 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:49.862 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.391 V. Piezo Error = -9.8 V. 17-03-18 01:51:49.862 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29798 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29795 (-130.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29791 (-130.9 uncal um), Max = 29806 (-131.0 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:51:49.862 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29798, posNoise = 8, negNoise = 7 17-03-18 01:51:49.862 -07 000000610 INF: Z Motor: After move to -0.131737, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:49.862 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms) 17-03-18 01:51:49.862 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:49.862 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:49.862 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:49.862 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:49.862 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:49.862 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:49.862 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:49.862 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:49.862 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:51:49.862 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:49.862 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:49.862 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:49.872 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:49.872 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:49.872 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:49.872 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:49.882 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:51:49.882 -07 000000480 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:51:49.882 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:51:49.882 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:49.892 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28955 150\n [Camera] 17-03-18 01:51:50.092 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:50.481 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:50.481 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:50.481 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:50.481 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:50.481 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:50.481 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:50.491 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:50.491 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:50.491 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:50.491 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:51:50.670 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28955 777 17-03-18 01:51:50.820 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:50.860 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 373 ms. 17-03-18 01:51:50.860 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 01:51:50.860 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:50.860 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 373 ms. 17-03-18 01:51:50.860 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms. 17-03-18 01:51:50.860 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:50.870 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:51:50.870 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 01:51:50.870 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:51:50.880 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms. 17-03-18 01:51:51.010 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:51.010 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:51.010 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:51.010 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:51.010 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:51.010 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:51.010 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:51.010 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:51.020 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:51.020 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start. 17-03-18 01:51:51.200 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:51:51.200 -07 000000444 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:51.200 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28955 150' command took 3 ms to send, 1305 ms to get response, and 1315 ms overall 17-03-18 01:51:51.200 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.132217 17-03-18 01:51:51.200 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13222 mm 17-03-18 01:51:51.200 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:51.209 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True) 17-03-18 01:51:51.209 -07 000000606 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm 17-03-18 01:51:51.209 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:51.209 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 28883, sync = True, waitForSettling = False) 17-03-18 01:51:51.209 -07 000000430 INF: Z Motor: Moving to -0.132218 mm, started at -0.131752 mm, distance = -0.47 um 17-03-18 01:51:51.209 -07 000000576 INF: FPGA: Recv YRDPOS 129482 17-03-18 01:51:51.219 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:51.219 -07 000000606 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:51.219 -07 000000430 INF: FPGA: Xmit ZDACW 28883\n [Z Motor] 17-03-18 01:51:51.219 -07 000000606 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:51.219 -07 000000606 INF: Y Motor: Moving 1342 steps-19 17-03-18 01:51:51.219 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:51:51.229 -07 000000430 INF: FPGA: 'ZDACW 28883' command took 0 ms to send, 0 ms to get response, and 16 ms overall 17-03-18 01:51:51.229 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:51.229 -07 000000591 INF: FPGA: Recv ZDACR 28883 17-03-18 01:51:51.239 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:51.239 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:51.239 -07 000000430 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet)) 17-03-18 01:51:51.399 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 386 ms. 17-03-18 01:51:51.399 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 01:51:51.399 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:51.399 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 382 ms. 17-03-18 01:51:51.399 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms. 17-03-18 01:51:51.399 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:51.409 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:51.409 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 01:51:51.409 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:51.409 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:51:51.609 -07 000000576 INF: FPGA: Recv YMVTILE 17-03-18 01:51:51.609 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:51:51.659 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:51.659 -07 000000501 INF: FPGA: Recv YRDPOS 131187 17-03-18 01:51:51.669 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:51.669 -07 000000606 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:51.669 -07 000000606 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm) 17-03-18 01:51:51.669 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.839 mm, average velocity = 2.113 mm/sec 17-03-18 01:51:51.798 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.988112, 17-03-18 01:51:51.958 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:51.958 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:52.617 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:52.617 -07 000000480 INF: FPGA: Recv YRDPOS 131187 17-03-18 01:51:52.627 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.627 -07 000000606 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:52.647 -07 000000606 INF: Y Motor: After move to 64.062607, error = -0.006454, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:52.647 -07 000000606 INF: Y Motor: Position error after settling (table move) = -13 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:52.647 -07 000000606 INF: Y Motor: Moved to 64.0562 after 1443 ms (table move) 17-03-18 01:51:52.647 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132218 mm (DAC = 28883) 17-03-18 01:51:52.647 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.657 -07 000000576 INF: FPGA: Recv ZSGSRD 29876 17-03-18 01:51:52.657 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 01:51:52.657 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.657 -07 000000447 INF: FPGA: Recv ZSGSRD 29868 17-03-18 01:51:52.667 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:52.667 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.667 -07 000000561 INF: FPGA: Recv ZSGSRD 29878 17-03-18 01:51:52.677 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.677 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.677 -07 000000576 INF: FPGA: Recv ZSGSRD 29868 17-03-18 01:51:52.687 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.687 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.687 -07 000000444 INF: FPGA: Recv ZSGSRD 29872 17-03-18 01:51:52.697 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.697 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.697 -07 000000447 INF: FPGA: Recv ZSGSRD 29876 17-03-18 01:51:52.707 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.707 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.707 -07 000000561 INF: FPGA: Recv ZSGSRD 29860 17-03-18 01:51:52.717 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.717 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.717 -07 000000576 INF: FPGA: Recv ZSGSRD 29868 17-03-18 01:51:52.727 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.727 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.727 -07 000000606 INF: FPGA: Recv ZSGSRD 29875 17-03-18 01:51:52.737 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.737 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.737 -07 000000444 INF: FPGA: Recv ZSGSRD 29876 17-03-18 01:51:52.747 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.747 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:52.747 -07 000000592 INF: FPGA: Recv ZPIEZORD 25476 17-03-18 01:51:52.757 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.757 -07 000000610 INF: Z Motor: Piezo is near 34.4 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.407 V. Piezo Error = -9.6 V. 17-03-18 01:51:52.757 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29872 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29874 (-131.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29860 (-131.4 uncal um), Max = 29878 (-131.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 12 (0.1 uncal um) 17-03-18 01:51:52.757 -07 000000610 INF: Z Motor: ADC noise = 12, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29872, posNoise = 6, negNoise = 12 17-03-18 01:51:52.757 -07 000000610 INF: Z Motor: After move to -0.132218, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:52.757 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 102 ms (allowed 150 ms), total time = 1547 ms 17-03-18 01:51:52.757 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:52.806 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms 17-03-18 01:51:52.806 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:52.806 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05615234375, Z-position -0.132227417109818. ---------- 17-03-18 01:51:52.806 -07 000000610 INF: Cycle 92 Tile 6 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:52.806 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28706, sync = True, waitForSettling = True) 17-03-18 01:51:52.806 -07 000000610 INF: Z Motor: Moving to -0.131408 mm, started at -0.132227 mm, distance = 0.82 um 17-03-18 01:51:52.806 -07 000000610 INF: FPGA: Xmit ZDACW 28706\n [Z Motor] 17-03-18 01:51:52.806 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 01:51:52.816 -07 000000610 INF: FPGA: 'ZDACW 28706' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 01:51:52.816 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:52.816 -07 000000561 INF: FPGA: Recv ZDACR 28706 17-03-18 01:51:52.826 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.826 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:52.976 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.976 -07 000000592 INF: FPGA: Recv ZSGSRD 29746 17-03-18 01:51:52.986 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:52.986 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.986 -07 000000444 INF: FPGA: Recv ZSGSRD 29748 17-03-18 01:51:52.996 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:52.996 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:52.996 -07 000000480 INF: FPGA: Recv ZSGSRD 29744 17-03-18 01:51:53.006 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.006 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.006 -07 000000444 INF: FPGA: Recv ZSGSRD 29741 17-03-18 01:51:53.016 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.016 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.016 -07 000000592 INF: FPGA: Recv ZSGSRD 29746 17-03-18 01:51:53.026 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.026 -07 000000444 INF: FPGA: Recv ZSGSRD 29743 17-03-18 01:51:53.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.036 -07 000000592 INF: FPGA: Recv ZSGSRD 29742 17-03-18 01:51:53.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.046 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.046 -07 000000480 INF: FPGA: Recv ZSGSRD 29747 17-03-18 01:51:53.056 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.056 -07 000000444 INF: FPGA: Recv ZSGSRD 29744 17-03-18 01:51:53.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:53.066 -07 000000447 INF: FPGA: Recv ZSGSRD 29749 17-03-18 01:51:53.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.076 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:53.076 -07 000000444 INF: FPGA: Recv ZPIEZORD 25267 17-03-18 01:51:53.086 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:53.086 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.380 V. Piezo Error = -9.8 V. 17-03-18 01:51:53.086 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29745 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29745 (-130.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29741 (-130.6 uncal um), Max = 29749 (-130.7 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:53.086 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29745, posNoise = 4, negNoise = 4 17-03-18 01:51:53.086 -07 000000610 INF: Z Motor: After move to -0.131408, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:53.086 -07 000000610 INF: Z Motor: MoveAbsStepped took 273 ms) 17-03-18 01:51:53.086 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:53.086 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:53.086 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:53.086 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:53.086 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:53.086 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:53.086 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:53.086 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:53.086 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:53.086 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:53.086 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 01:51:53.086 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:53.096 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:53.096 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:53.096 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:51:53.096 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:53.106 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms. 17-03-18 01:51:53.106 -07 000000592 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 01:51:53.106 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms. 17-03-18 01:51:53.106 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:53.106 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28883 150\n [Camera] 17-03-18 01:51:53.306 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:53.705 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:53.705 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:53.705 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:53.705 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:53.705 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:53.705 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:53.705 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:53.705 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) start. 17-03-18 01:51:53.705 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:53.705 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start. 17-03-18 01:51:53.894 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28883 777 17-03-18 01:51:54.044 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:54.074 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2317127784, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 01:51:54.074 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 01:51:54.084 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:54.084 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 01:51:54.084 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms. 17-03-18 01:51:54.084 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:54.084 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:51:54.084 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:51:54.084 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 01:51:54.094 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 01:51:54.234 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:54.234 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:54.354 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:54.354 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:54.354 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:54.354 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:54.354 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:54.354 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:51:54.364 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:54.364 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:51:54.423 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:54.423 -07 000000592 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:54.423 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28883 150' command took 2 ms to send, 1302 ms to get response, and 1314 ms overall 17-03-18 01:51:54.423 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:51:54.423 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 7 at Y-position 64.05615234375, Z-Position -0.131411542167815. ------ 17-03-18 01:51:54.423 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:54.423 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13803 mm 17-03-18 01:51:54.423 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:54.433 -07 000000447 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:54.433 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True) 17-03-18 01:51:54.433 -07 000000606 INF: Y Motor: Moving to 64.8926 mm, started at 64.0562 mm, delta = 0.8365 mm 17-03-18 01:51:54.433 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:51:54.433 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:54.433 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 30153, sync = True, waitForSettling = False) 17-03-18 01:51:54.433 -07 000000576 INF: Z Motor: Moving to -0.138032 mm, started at -0.131412 mm, distance = -6.62 um 17-03-18 01:51:54.433 -07 000000447 INF: FPGA: Recv YRDPOS 131187 17-03-18 01:51:54.443 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:54.443 -07 000000606 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:54.443 -07 000000606 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:54.443 -07 000000606 INF: Y Motor: Moving 1338 steps-13 17-03-18 01:51:54.443 -07 000000576 INF: FPGA: Xmit ZDACW 30153\n [Z Motor] 17-03-18 01:51:54.443 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:51:54.453 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:51:54.453 -07 000000576 INF: FPGA: 'ZDACW 30153' command took 1 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 01:51:54.463 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:54.473 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:54.473 -07 000000626 INF: FPGA: Recv ZDACR 30153 17-03-18 01:51:54.483 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 27 ms overall 17-03-18 01:51:54.483 -07 000000576 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet)) 17-03-18 01:51:54.653 -07 000000576 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:51:54.653 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 2 ms to send, 195 ms to get response, and 223 ms overall 17-03-18 01:51:54.743 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 390 ms. 17-03-18 01:51:54.743 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 390 ms. 17-03-18 01:51:54.743 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:54.753 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 389 ms. 17-03-18 01:51:54.753 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 01:51:54.753 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:54.753 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:54.753 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:51:54.753 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:54.763 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms. 17-03-18 01:51:54.833 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 01:51:54.833 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:51:54.883 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:54.883 -07 000000480 INF: FPGA: Recv YRDPOS 132871 17-03-18 01:51:54.893 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:54.893 -07 000000606 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:54.893 -07 000000606 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm) 17-03-18 01:51:54.893 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.836 mm, average velocity = 2.107 mm/sec 17-03-18 01:51:55.841 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:55.841 -07 000000592 INF: FPGA: Recv YRDPOS 132871 17-03-18 01:51:55.851 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:55.851 -07 000000606 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:55.871 -07 000000606 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:55.871 -07 000000606 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:55.871 -07 000000606 INF: Y Motor: Moved to 64.8784 after 1446 ms (table move) 17-03-18 01:51:55.881 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138032 mm (DAC = 30153) 17-03-18 01:51:55.881 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.881 -07 000000579 INF: FPGA: Recv ZSGSRD 30783 17-03-18 01:51:55.891 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:51:55.891 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.891 -07 000000579 INF: FPGA: Recv ZSGSRD 30779 17-03-18 01:51:55.901 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.901 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.901 -07 000000579 INF: FPGA: Recv ZSGSRD 30779 17-03-18 01:51:55.911 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.911 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.911 -07 000000579 INF: FPGA: Recv ZSGSRD 30781 17-03-18 01:51:55.921 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.921 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.921 -07 000000579 INF: FPGA: Recv ZSGSRD 30778 17-03-18 01:51:55.931 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.931 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.931 -07 000000579 INF: FPGA: Recv ZSGSRD 30775 17-03-18 01:51:55.941 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.941 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.941 -07 000000579 INF: FPGA: Recv ZSGSRD 30778 17-03-18 01:51:55.951 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.951 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.951 -07 000000579 INF: FPGA: Recv ZSGSRD 30775 17-03-18 01:51:55.961 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.961 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.961 -07 000000579 INF: FPGA: Recv ZSGSRD 30780 17-03-18 01:51:55.971 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.971 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:55.971 -07 000000579 INF: FPGA: Recv ZSGSRD 30776 17-03-18 01:51:55.981 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.981 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:55.981 -07 000000579 INF: FPGA: Recv ZPIEZORD 26620 17-03-18 01:51:55.991 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:55.991 -07 000000444 INF: Z Motor: Piezo is near 36.9 V (nominally 0 to 100 V), expect near 46.0 V, since DAC is at 4.601 V. Piezo Error = -9.1 V. 17-03-18 01:51:55.991 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.0 um, Read 10 ADC samples: Avg = 30778 (-137.2 uncal um), Error = 0.8 uncal um, Median = 30778 (-137.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30775 (-137.2 uncal um), Max = 30783 (-137.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 01:51:55.991 -07 000000444 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30778, posNoise = 5, negNoise = 3 17-03-18 01:51:55.991 -07 000000444 INF: Z Motor: After move to -0.138032, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:55.991 -07 000000444 INF: Z Motor: Settle wait time = 1451 ms, measure time = 107 ms (allowed 150 ms), total time = 1558 ms 17-03-18 01:51:55.991 -07 000000444 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:56.040 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1612 ms 17-03-18 01:51:56.040 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:56.040 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:56.040 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:56.040 -07 000000480 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:56.040 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:51:56.040 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:56.040 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:56.040 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:51:56.040 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:51:56.050 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:51:56.050 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:51:56.060 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-18 01:51:56.060 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms. 17-03-18 01:51:56.060 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:51:56.100 -07 000000561 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:51:56.400 -07 000000447 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:51:56.400 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:51:56.400 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:51:56.410 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start. 17-03-18 01:51:56.440 -07 000000424 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:51:56.450 -07 000000576 INF: FPGA: Recv CAMSNAP 17-03-18 01:51:56.450 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 387 ms overall 17-03-18 01:51:56.530 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 125 ms. 17-03-18 01:51:56.530 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:56.530 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:51:56.530 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 127 ms. 17-03-18 01:51:56.549 -07 000000592 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:51:56.549 -07 000000576 INF: Autofocus start 17-03-18 01:51:56.549 -07 000000576 INF: MeasureProfile start 17-03-18 01:51:56.549 -07 000000579 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:51:56.559 -07 000000592 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:51:56.559 -07 000000592 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:51:56.559 -07 000000576 INF: MeasureProfile done 17-03-18 01:51:56.559 -07 000000576 INF: X=-80 Z correction [um]=-0.3928285 17-03-18 01:51:56.559 -07 000000576 INF: Autofocus finished 17-03-18 01:51:56.759 -07 000000576 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:51:56.759 -07 000000592 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:51:56.759 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.138047753310254. ---------- 17-03-18 01:51:56.759 -07 000000610 INF: Cycle 92 Tile 7 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:56.769 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28580, sync = True, waitForSettling = True) 17-03-18 01:51:56.769 -07 000000610 INF: Z Motor: Moving to -0.130831 mm, started at -0.138048 mm, distance = 7.22 um 17-03-18 01:51:56.769 -07 000000610 INF: FPGA: Xmit ZDACW 28580\n [Z Motor] 17-03-18 01:51:56.769 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 01:51:56.779 -07 000000610 INF: FPGA: 'ZDACW 28580' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:56.779 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:56.779 -07 000000444 INF: FPGA: Recv ZDACR 28580 17-03-18 01:51:56.789 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:56.789 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:51:56.939 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.939 -07 000000561 INF: FPGA: Recv ZSGSRD 29653 17-03-18 01:51:56.949 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:56.949 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.949 -07 000000444 INF: FPGA: Recv ZSGSRD 29655 17-03-18 01:51:56.949 -07 000000480 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:51:56.949 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:51:56.959 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:56.959 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.959 -07 000000626 INF: FPGA: Recv ZSGSRD 29651 17-03-18 01:51:56.969 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:56.969 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.969 -07 000000480 INF: FPGA: Recv ZSGSRD 29654 17-03-18 01:51:56.979 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:56.979 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.979 -07 000000606 INF: FPGA: Recv ZSGSRD 29654 17-03-18 01:51:56.989 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:56.989 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.989 -07 000000424 INF: FPGA: Recv ZSGSRD 29651 17-03-18 01:51:56.999 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:56.999 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:56.999 -07 000000592 INF: FPGA: Recv ZSGSRD 29658 17-03-18 01:51:57.009 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:57.009 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:57.009 -07 000000424 INF: FPGA: Recv ZSGSRD 29655 17-03-18 01:51:57.019 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:57.019 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:57.019 -07 000000576 INF: FPGA: Recv ZSGSRD 29659 17-03-18 01:51:57.029 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:57.029 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:57.029 -07 000000424 INF: FPGA: Recv ZSGSRD 29657 17-03-18 01:51:57.039 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:57.039 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:57.039 -07 000000629 INF: FPGA: Recv ZPIEZORD 25149 17-03-18 01:51:57.049 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:57.049 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.361 V. Piezo Error = -9.9 V. 17-03-18 01:51:57.049 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.8 um, Read 10 ADC samples: Avg = 29655 (-130.1 uncal um), Error = 0.8 uncal um, Median = 29654 (-130.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29651 (-130.0 uncal um), Max = 29659 (-130.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:51:57.049 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29655, posNoise = 4, negNoise = 4 17-03-18 01:51:57.049 -07 000000610 INF: Z Motor: After move to -0.130831, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:57.049 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 01:51:57.049 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:51:57.049 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:51:57.049 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:51:57.049 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:51:57.049 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:51:57.049 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:51:57.049 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:51:57.049 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:51:57.049 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:51:57.049 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:51:57.049 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:51:57.049 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:51:57.059 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:51:57.059 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:51:57.059 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:51:57.059 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:51:57.069 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:51:57.069 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:57.069 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:51:57.069 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:51:57.069 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28757 150\n [Camera] 17-03-18 01:51:57.158 -07 000000592 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.019446, 17-03-18 01:51:57.268 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:51:57.667 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:51:57.667 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:51:57.667 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:57.667 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:51:57.667 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:51:57.667 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:57.667 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:57.667 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:51:57.667 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:57.667 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:51:57.857 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28757 777 17-03-18 01:51:58.007 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:51:58.037 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 372 ms. 17-03-18 01:51:58.037 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms. 17-03-18 01:51:58.037 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:58.047 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 376 ms. 17-03-18 01:51:58.047 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 01:51:58.047 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:58.047 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:58.047 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms. 17-03-18 01:51:58.047 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:51:58.057 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 01:51:58.196 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:51:58.196 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:51:58.196 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:51:58.306 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:51:58.306 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:51:58.306 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:51:58.316 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:51:58.316 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:51:58.316 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:51:58.316 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:51:58.386 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:51:58.386 -07 000000606 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:51:58.386 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28757 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:51:58.386 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131433 17-03-18 01:51:58.386 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13143 mm 17-03-18 01:51:58.386 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:51:58.386 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 28712, sync = True, waitForSettling = False) 17-03-18 01:51:58.386 -07 000000424 INF: Z Motor: Moving to -0.131435 mm, started at -0.130833 mm, distance = -0.60 um 17-03-18 01:51:58.386 -07 000000424 INF: FPGA: Xmit ZDACW 28712\n [Z Motor] 17-03-18 01:51:58.386 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True) 17-03-18 01:51:58.386 -07 000000480 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm 17-03-18 01:51:58.396 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:58.396 -07 000000606 INF: FPGA: Recv ZDACW 17-03-18 01:51:58.396 -07 000000424 INF: FPGA: 'ZDACW 28712' command took 0 ms to send, 1 ms to get response, and 2 ms overall 17-03-18 01:51:58.396 -07 000000576 INF: FPGA: Recv YRDPOS 132871 17-03-18 01:51:58.406 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:58.406 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:51:58.406 -07 000000480 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:58.406 -07 000000480 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:51:58.406 -07 000000480 INF: Y Motor: Moving 1351 steps-29 17-03-18 01:51:58.406 -07 000000592 INF: FPGA: Recv ZDACR 28712 17-03-18 01:51:58.416 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 01:51:58.416 -07 000000424 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-18 01:51:58.416 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:51:58.705 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 389 ms. 17-03-18 01:51:58.705 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 01:51:58.705 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:58.705 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 391 ms. 17-03-18 01:51:58.705 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms. 17-03-18 01:51:58.705 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:51:58.715 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:58.715 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:51:58.715 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms. 17-03-18 01:51:58.715 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms. 17-03-18 01:51:58.785 -07 000000626 INF: FPGA: Recv YMVTILE 17-03-18 01:51:58.785 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 387 ms overall 17-03-18 01:51:58.835 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:58.835 -07 000000576 INF: FPGA: Recv YRDPOS 134581 17-03-18 01:51:58.845 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:58.845 -07 000000480 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:58.845 -07 000000480 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm) 17-03-18 01:51:58.845 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.176 mm/sec 17-03-18 01:51:59.793 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:51:59.793 -07 000000592 INF: FPGA: Recv YRDPOS 134581 17-03-18 01:51:59.803 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:51:59.803 -07 000000480 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:51:59.833 -07 000000480 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:51:59.833 -07 000000480 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:51:59.833 -07 000000480 INF: Y Motor: Moved to 65.7134 after 1442 ms (table move) 17-03-18 01:51:59.833 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131435 mm (DAC = 28712) 17-03-18 01:51:59.833 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.833 -07 000000424 INF: FPGA: Recv ZSGSRD 29749 17-03-18 01:51:59.843 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:51:59.843 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.843 -07 000000626 INF: FPGA: Recv ZSGSRD 29747 17-03-18 01:51:59.853 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:51:59.853 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.853 -07 000000629 INF: FPGA: Recv ZSGSRD 29754 17-03-18 01:51:59.863 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.863 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.863 -07 000000424 INF: FPGA: Recv ZSGSRD 29752 17-03-18 01:51:59.873 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.873 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.873 -07 000000480 INF: FPGA: Recv ZSGSRD 29744 17-03-18 01:51:59.883 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.883 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.883 -07 000000629 INF: FPGA: Recv ZSGSRD 29750 17-03-18 01:51:59.893 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.893 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.893 -07 000000576 INF: FPGA: Recv ZSGSRD 29744 17-03-18 01:51:59.903 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.903 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.903 -07 000000626 INF: FPGA: Recv ZSGSRD 29747 17-03-18 01:51:59.913 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.913 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.913 -07 000000606 INF: FPGA: Recv ZSGSRD 29755 17-03-18 01:51:59.923 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.923 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:51:59.923 -07 000000592 INF: FPGA: Recv ZSGSRD 29749 17-03-18 01:51:59.933 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.933 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:51:59.933 -07 000000512 INF: FPGA: Recv ZPIEZORD 25307 17-03-18 01:51:59.943 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:51:59.943 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.381 V. Piezo Error = -9.7 V. 17-03-18 01:51:59.943 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.4 um, Read 10 ADC samples: Avg = 29749 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29749 (-130.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29744 (-130.6 uncal um), Max = 29755 (-130.7 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:51:59.943 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29749, posNoise = 6, negNoise = 5 17-03-18 01:51:59.943 -07 000000610 INF: Z Motor: After move to -0.131435, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:51:59.943 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 105 ms (allowed 150 ms), total time = 1551 ms 17-03-18 01:51:59.943 -07 000000610 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms 17-03-18 01:51:59.993 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1603 ms 17-03-18 01:51:59.993 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:51:59.993 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.131437239016382. ---------- 17-03-18 01:51:59.993 -07 000000610 INF: Cycle 92 Tile 8 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:51:59.993 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28535, sync = True, waitForSettling = True) 17-03-18 01:51:59.993 -07 000000610 INF: Z Motor: Moving to -0.130625 mm, started at -0.131437 mm, distance = 0.81 um 17-03-18 01:51:59.993 -07 000000610 INF: FPGA: Xmit ZDACW 28535\n [Z Motor] 17-03-18 01:51:59.993 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:52:00.003 -07 000000610 INF: FPGA: 'ZDACW 28535' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:52:00.003 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:00.003 -07 000000592 INF: FPGA: Recv ZDACR 28535 17-03-18 01:52:00.013 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.013 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:00.163 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.163 -07 000000626 INF: FPGA: Recv ZSGSRD 29626 17-03-18 01:52:00.173 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:00.173 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.173 -07 000000592 INF: FPGA: Recv ZSGSRD 29623 17-03-18 01:52:00.183 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.183 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.183 -07 000000576 INF: FPGA: Recv ZSGSRD 29630 17-03-18 01:52:00.193 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.193 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.193 -07 000000629 INF: FPGA: Recv ZSGSRD 29622 17-03-18 01:52:00.203 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.203 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.203 -07 000000592 INF: FPGA: Recv ZSGSRD 29619 17-03-18 01:52:00.213 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.213 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.213 -07 000000512 INF: FPGA: Recv ZSGSRD 29618 17-03-18 01:52:00.223 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.223 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.223 -07 000000606 INF: FPGA: Recv ZSGSRD 29629 17-03-18 01:52:00.233 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.233 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.233 -07 000000424 INF: FPGA: Recv ZSGSRD 29632 17-03-18 01:52:00.243 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.243 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.243 -07 000000576 INF: FPGA: Recv ZSGSRD 29621 17-03-18 01:52:00.253 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.253 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:00.253 -07 000000592 INF: FPGA: Recv ZSGSRD 29622 17-03-18 01:52:00.263 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.263 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:00.263 -07 000000606 INF: FPGA: Recv ZPIEZORD 25130 17-03-18 01:52:00.273 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:00.273 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -9.9 V. 17-03-18 01:52:00.273 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29624 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29622 (-129.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29618 (-129.8 uncal um), Max = 29632 (-129.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:52:00.273 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29624, posNoise = 8, negNoise = 6 17-03-18 01:52:00.273 -07 000000610 INF: Z Motor: After move to -0.130625, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:00.273 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 01:52:00.273 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:00.273 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:00.273 -07 000000592 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:00.273 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:00.273 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:00.273 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:00.273 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:00.273 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:00.273 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:00.273 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:00.273 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:52:00.273 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:00.273 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:00.282 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:00.282 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:00.282 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:00.292 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:52:00.292 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:52:00.292 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:52:00.292 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:52:00.292 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28712 150\n [Camera] 17-03-18 01:52:00.492 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:00.891 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:00.891 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:00.891 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:00.891 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:00.891 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:52:00.891 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:00.891 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:00.891 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:00.891 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:00.891 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:52:01.081 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28712 777 17-03-18 01:52:01.231 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:01.261 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 01:52:01.261 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 01:52:01.261 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:01.271 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 375 ms. 17-03-18 01:52:01.271 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 01:52:01.271 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:01.271 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:01.271 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:52:01.271 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:01.281 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 01:52:01.420 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1116 17-03-18 01:52:01.420 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1116 17-03-18 01:52:01.420 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:01.420 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:01.420 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 01:52:01.420 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1116 17-03-18 01:52:01.420 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1116 17-03-18 01:52:01.420 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:01.540 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:01.540 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:52:01.610 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:52:01.610 -07 000000592 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:01.610 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28712 150' command took 2 ms to send, 1303 ms to get response, and 1314 ms overall 17-03-18 01:52:01.610 -07 000000610 INF: Skipping AutoFocus in Tile 9: adopting Best-Z from the cache: -0.131006 17-03-18 01:52:01.610 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13101 mm 17-03-18 01:52:01.610 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:01.610 -07 000000480 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True) 17-03-18 01:52:01.610 -07 000000480 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm 17-03-18 01:52:01.610 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 28618, sync = True, waitForSettling = False) 17-03-18 01:52:01.610 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:01.610 -07 000000626 INF: Z Motor: Moving to -0.131005 mm, started at -0.130634 mm, distance = -0.37 um 17-03-18 01:52:01.620 -07 000000626 INF: FPGA: Xmit ZDACW 28618\n [Z Motor] 17-03-18 01:52:01.620 -07 000000576 INF: FPGA: Recv YRDPOS 134581 17-03-18 01:52:01.620 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:52:01.620 -07 000000480 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:01.620 -07 000000480 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:01.620 -07 000000480 INF: Y Motor: Moving 1343 steps-19 17-03-18 01:52:01.620 -07 000000430 INF: FPGA: Recv ZDACW 17-03-18 01:52:01.630 -07 000000626 INF: FPGA: 'ZDACW 28618' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 01:52:01.630 -07 000000480 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:01.640 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:01.640 -07 000000467 INF: FPGA: Recv ZDACR 28618 17-03-18 01:52:01.650 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:01.650 -07 000000626 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet)) 17-03-18 01:52:01.810 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 395 ms. 17-03-18 01:52:01.810 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 01:52:01.820 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:01.820 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms. 17-03-18 01:52:01.820 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 01:52:01.929 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 01:52:01.939 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:52:01.939 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:01.939 -07 000000576 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:01.939 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:52:01.939 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:01.949 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 524 ms. 17-03-18 01:52:01.999 -07 000000512 INF: FPGA: Recv YMVTILE 17-03-18 01:52:01.999 -07 000000480 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall 17-03-18 01:52:02.049 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:02.049 -07 000000576 INF: FPGA: Recv YRDPOS 136270 17-03-18 01:52:02.059 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:02.059 -07 000000480 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:02.059 -07 000000480 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 01:52:02.059 -07 000000480 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.839 mm, average velocity = 2.180 mm/sec 17-03-18 01:52:02.528 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.033041, 17-03-18 01:52:03.007 -07 000000480 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:03.007 -07 000000629 INF: FPGA: Recv YRDPOS 136270 17-03-18 01:52:03.017 -07 000000480 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:03.017 -07 000000480 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:03.037 -07 000000480 INF: Y Motor: After move to 66.552605, error = -0.014519, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:03.037 -07 000000480 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:52:03.037 -07 000000480 INF: Y Motor: Moved to 66.5381 after 1430 ms (table move) 17-03-18 01:52:03.047 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131005 mm (DAC = 28618) 17-03-18 01:52:03.047 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.047 -07 000000467 INF: FPGA: Recv ZSGSRD 29681 17-03-18 01:52:03.057 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:03.057 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.057 -07 000000487 INF: FPGA: Recv ZSGSRD 29684 17-03-18 01:52:03.067 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.067 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.067 -07 000000487 INF: FPGA: Recv ZSGSRD 29685 17-03-18 01:52:03.077 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:03.077 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.077 -07 000000629 INF: FPGA: Recv ZSGSRD 29682 17-03-18 01:52:03.087 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.087 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.087 -07 000000424 INF: FPGA: Recv ZSGSRD 29685 17-03-18 01:52:03.097 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.097 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.097 -07 000000487 INF: FPGA: Recv ZSGSRD 29683 17-03-18 01:52:03.107 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.107 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.107 -07 000000487 INF: FPGA: Recv ZSGSRD 29682 17-03-18 01:52:03.117 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.117 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.117 -07 000000430 INF: FPGA: Recv ZSGSRD 29682 17-03-18 01:52:03.127 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.127 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.127 -07 000000487 INF: FPGA: Recv ZSGSRD 29686 17-03-18 01:52:03.137 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.137 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.137 -07 000000487 INF: FPGA: Recv ZSGSRD 29683 17-03-18 01:52:03.147 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.147 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:03.147 -07 000000467 INF: FPGA: Recv ZPIEZORD 25256 17-03-18 01:52:03.157 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.157 -07 000000610 INF: Z Motor: Piezo is near 34.0 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.367 V. Piezo Error = -9.7 V. 17-03-18 01:52:03.157 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29683 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29683 (-130.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 5 (0.0 uncal um), Min = 29681 (-130.2 uncal um), Max = 29686 (-130.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 2 (0.0 uncal um) 17-03-18 01:52:03.157 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29683, posNoise = 3, negNoise = 2 17-03-18 01:52:03.157 -07 000000610 INF: Z Motor: After move to -0.131005, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:03.157 -07 000000610 INF: Z Motor: Settle wait time = 1432 ms, measure time = 109 ms (allowed 150 ms), total time = 1541 ms 17-03-18 01:52:03.157 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:03.207 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms 17-03-18 01:52:03.207 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:03.207 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5380859375, Z-position -0.131013241015025. ---------- 17-03-18 01:52:03.207 -07 000000610 INF: Cycle 92 Tile 9 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:03.207 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28441, sync = True, waitForSettling = True) 17-03-18 01:52:03.207 -07 000000610 INF: Z Motor: Moving to -0.130195 mm, started at -0.131013 mm, distance = 0.82 um 17-03-18 01:52:03.207 -07 000000610 INF: FPGA: Xmit ZDACW 28441\n [Z Motor] 17-03-18 01:52:03.217 -07 000000629 INF: FPGA: Recv ZDACW 17-03-18 01:52:03.217 -07 000000610 INF: FPGA: 'ZDACW 28441' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:52:03.217 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:03.217 -07 000000487 INF: FPGA: Recv ZDACR 28441 17-03-18 01:52:03.227 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.227 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:03.377 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.377 -07 000000467 INF: FPGA: Recv ZSGSRD 29566 17-03-18 01:52:03.387 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:03.387 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.387 -07 000000629 INF: FPGA: Recv ZSGSRD 29560 17-03-18 01:52:03.397 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.397 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.397 -07 000000487 INF: FPGA: Recv ZSGSRD 29558 17-03-18 01:52:03.407 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.407 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.407 -07 000000467 INF: FPGA: Recv ZSGSRD 29552 17-03-18 01:52:03.417 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.417 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.417 -07 000000487 INF: FPGA: Recv ZSGSRD 29555 17-03-18 01:52:03.427 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.427 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.427 -07 000000629 INF: FPGA: Recv ZSGSRD 29556 17-03-18 01:52:03.437 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.437 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.437 -07 000000424 INF: FPGA: Recv ZSGSRD 29558 17-03-18 01:52:03.447 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.447 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.447 -07 000000424 INF: FPGA: Recv ZSGSRD 29561 17-03-18 01:52:03.457 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.457 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.457 -07 000000424 INF: FPGA: Recv ZSGSRD 29557 17-03-18 01:52:03.467 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.467 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:03.467 -07 000000424 INF: FPGA: Recv ZSGSRD 29560 17-03-18 01:52:03.477 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.477 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:03.477 -07 000000424 INF: FPGA: Recv ZPIEZORD 25049 17-03-18 01:52:03.486 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:03.486 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.340 V. Piezo Error = -9.9 V. 17-03-18 01:52:03.486 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29558 (-129.4 uncal um), Error = 0.8 uncal um, Median = 29558 (-129.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29552 (-129.4 uncal um), Max = 29566 (-129.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:52:03.486 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29558, posNoise = 8, negNoise = 6 17-03-18 01:52:03.486 -07 000000610 INF: Z Motor: After move to -0.130195, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:03.486 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms) 17-03-18 01:52:03.486 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:03.486 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:03.486 -07 000000579 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:03.486 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:03.486 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:03.486 -07 000000487 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:03.486 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:03.486 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:03.486 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:03.486 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:03.486 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:03.486 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:03.496 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:03.496 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:03.496 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms. 17-03-18 01:52:03.496 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:03.506 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms. 17-03-18 01:52:03.506 -07 000000447 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms. 17-03-18 01:52:03.506 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms. 17-03-18 01:52:03.506 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 01:52:03.506 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28618 150\n [Camera] 17-03-18 01:52:03.716 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:04.105 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:04.105 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:04.105 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:04.105 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:04.105 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:04.105 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:04.105 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:04.105 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:52:04.115 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:04.115 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:52:04.295 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28618 777 17-03-18 01:52:04.445 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:04.495 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 387 ms. 17-03-18 01:52:04.495 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 01:52:04.495 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:04.495 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:04.495 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 01:52:04.495 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 386 ms. 17-03-18 01:52:04.495 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms. 17-03-18 01:52:04.495 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:04.505 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:04.505 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms. 17-03-18 01:52:04.634 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:04.634 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:04.634 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:04.634 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:04.634 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:52:04.634 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:04.634 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:04.634 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:04.634 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:04.634 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 01:52:04.824 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:04.824 -07 000000579 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:04.824 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28618 150' command took 2 ms to send, 1303 ms to get response, and 1314 ms overall 17-03-18 01:52:04.824 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131060 17-03-18 01:52:04.824 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13106 mm 17-03-18 01:52:04.824 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:04.834 -07 000000487 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True) 17-03-18 01:52:04.834 -07 000000487 INF: Y Motor: Moving to 67.3826 mm, started at 66.5381 mm, delta = 0.8445 mm 17-03-18 01:52:04.834 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:04.834 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28630, sync = True, waitForSettling = False) 17-03-18 01:52:04.834 -07 000000579 INF: Z Motor: Moving to -0.131060 mm, started at -0.130210 mm, distance = -0.85 um 17-03-18 01:52:04.834 -07 000000424 INF: FPGA: Recv YRDPOS 136271 17-03-18 01:52:04.844 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:04.844 -07 000000487 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:04.844 -07 000000579 INF: FPGA: Xmit ZDACW 28630\n [Z Motor] 17-03-18 01:52:04.844 -07 000000424 INF: FPGA: Recv ZDACW 17-03-18 01:52:04.844 -07 000000487 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:04.844 -07 000000487 INF: Y Motor: Moving 1350 steps-30 17-03-18 01:52:04.854 -07 000000579 INF: FPGA: 'ZDACW 28630' command took 0 ms to send, 0 ms to get response, and 18 ms overall 17-03-18 01:52:04.854 -07 000000487 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:04.864 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:04.864 -07 000000424 INF: FPGA: Recv ZDACR 28630 17-03-18 01:52:04.874 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:04.874 -07 000000579 INF: Z Motor: MoveAbsStepped took 38 ms (did NOT wait for settling yet)) 17-03-18 01:52:05.014 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 01:52:05.014 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:52:05.014 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:05.014 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 01:52:05.014 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms. 17-03-18 01:52:05.014 -07 000000467 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:05.024 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:05.024 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms. 17-03-18 01:52:05.024 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:05.034 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:52:05.223 -07 000000629 INF: FPGA: Recv YMVTILE 17-03-18 01:52:05.223 -07 000000487 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall 17-03-18 01:52:05.273 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:05.273 -07 000000430 INF: FPGA: Recv YRDPOS 137976 17-03-18 01:52:05.283 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall 17-03-18 01:52:05.283 -07 000000487 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:05.283 -07 000000487 INF: Y Motor: Position error before settling (table move) = -24 encoder counts (-0.012 mm) 17-03-18 01:52:05.283 -07 000000487 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.199 mm/sec 17-03-18 01:52:06.231 -07 000000487 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:06.231 -07 000000424 INF: FPGA: Recv YRDPOS 137977 17-03-18 01:52:06.241 -07 000000487 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:06.241 -07 000000487 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:06.261 -07 000000487 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:06.261 -07 000000487 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:52:06.261 -07 000000487 INF: Y Motor: Moved to 67.3716 after 1438 ms (table move) 17-03-18 01:52:06.271 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131060 mm (DAC = 28630) 17-03-18 01:52:06.271 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.271 -07 000000430 INF: FPGA: Recv ZSGSRD 29689 17-03-18 01:52:06.281 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:06.281 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.281 -07 000000430 INF: FPGA: Recv ZSGSRD 29697 17-03-18 01:52:06.291 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.291 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.291 -07 000000487 INF: FPGA: Recv ZSGSRD 29691 17-03-18 01:52:06.301 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.301 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.301 -07 000000430 INF: FPGA: Recv ZSGSRD 29693 17-03-18 01:52:06.311 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.311 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.311 -07 000000430 INF: FPGA: Recv ZSGSRD 29689 17-03-18 01:52:06.321 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.321 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.321 -07 000000430 INF: FPGA: Recv ZSGSRD 29690 17-03-18 01:52:06.331 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.331 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.331 -07 000000447 INF: FPGA: Recv ZSGSRD 29689 17-03-18 01:52:06.341 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.341 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.341 -07 000000447 INF: FPGA: Recv ZSGSRD 29687 17-03-18 01:52:06.351 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.351 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.351 -07 000000430 INF: FPGA: Recv ZSGSRD 29695 17-03-18 01:52:06.361 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.361 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.361 -07 000000430 INF: FPGA: Recv ZSGSRD 29697 17-03-18 01:52:06.371 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.371 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:06.371 -07 000000447 INF: FPGA: Recv ZPIEZORD 25309 17-03-18 01:52:06.381 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:06.381 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.369 V. Piezo Error = -9.6 V. 17-03-18 01:52:06.381 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.1 um, Read 10 ADC samples: Avg = 29692 (-130.3 uncal um), Error = 0.8 uncal um, Median = 29690 (-130.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29687 (-130.3 uncal um), Max = 29697 (-130.3 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:52:06.381 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29692, posNoise = 5, negNoise = 5 17-03-18 01:52:06.381 -07 000000610 INF: Z Motor: After move to -0.131060, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:06.381 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 109 ms (allowed 150 ms), total time = 1548 ms 17-03-18 01:52:06.381 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:06.431 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1604 ms 17-03-18 01:52:06.431 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:06.431 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.131071058924301. ---------- 17-03-18 01:52:06.431 -07 000000610 INF: Cycle 92 Tile 10 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:06.431 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28453, sync = True, waitForSettling = True) 17-03-18 01:52:06.431 -07 000000610 INF: Z Motor: Moving to -0.130249 mm, started at -0.131071 mm, distance = 0.82 um 17-03-18 01:52:06.431 -07 000000610 INF: FPGA: Xmit ZDACW 28453\n [Z Motor] 17-03-18 01:52:06.431 -07 000000618 INF: FPGA: Recv ZDACW 17-03-18 01:52:06.441 -07 000000610 INF: FPGA: 'ZDACW 28453' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:52:06.441 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:06.441 -07 000000579 INF: FPGA: Recv ZDACR 28453 17-03-18 01:52:06.451 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.451 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:06.601 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.601 -07 000000579 INF: FPGA: Recv ZSGSRD 29570 17-03-18 01:52:06.611 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:06.611 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.611 -07 000000430 INF: FPGA: Recv ZSGSRD 29570 17-03-18 01:52:06.621 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.621 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.621 -07 000000579 INF: FPGA: Recv ZSGSRD 29563 17-03-18 01:52:06.631 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.631 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.631 -07 000000430 INF: FPGA: Recv ZSGSRD 29566 17-03-18 01:52:06.641 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.641 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.641 -07 000000579 INF: FPGA: Recv ZSGSRD 29566 17-03-18 01:52:06.651 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.651 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.651 -07 000000467 INF: FPGA: Recv ZSGSRD 29565 17-03-18 01:52:06.661 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.661 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.661 -07 000000447 INF: FPGA: Recv ZSGSRD 29563 17-03-18 01:52:06.671 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.671 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.671 -07 000000618 INF: FPGA: Recv ZSGSRD 29566 17-03-18 01:52:06.680 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.680 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.680 -07 000000629 INF: FPGA: Recv ZSGSRD 29571 17-03-18 01:52:06.690 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.690 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:06.690 -07 000000629 INF: FPGA: Recv ZSGSRD 29566 17-03-18 01:52:06.700 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.700 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:06.700 -07 000000467 INF: FPGA: Recv ZPIEZORD 25096 17-03-18 01:52:06.710 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:06.710 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.342 V. Piezo Error = -9.8 V. 17-03-18 01:52:06.710 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.2 um, Read 10 ADC samples: Avg = 29567 (-129.5 uncal um), Error = 0.8 uncal um, Median = 29566 (-129.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29563 (-129.5 uncal um), Max = 29571 (-129.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:52:06.710 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29567, posNoise = 4, negNoise = 4 17-03-18 01:52:06.710 -07 000000610 INF: Z Motor: After move to -0.130249, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:06.710 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 01:52:06.710 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:06.710 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:06.710 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:06.710 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:06.710 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:06.710 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:06.710 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:06.710 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:06.710 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 01:52:06.710 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:06.710 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:06.710 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:06.720 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:06.720 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:06.720 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:06.720 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:06.730 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms. 17-03-18 01:52:06.730 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:52:06.730 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:52:06.730 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:52:06.740 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28630 150\n [Camera] 17-03-18 01:52:06.930 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:06.930 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:06.940 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:07.329 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:07.329 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:07.329 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:07.329 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:07.329 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 01:52:07.329 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:07.329 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:07.329 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:07.329 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:07.329 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 01:52:07.519 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28630 777 17-03-18 01:52:07.669 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:07.719 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 384 ms. 17-03-18 01:52:07.719 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms. 17-03-18 01:52:07.719 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:07.719 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 384 ms. 17-03-18 01:52:07.719 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 01:52:07.719 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:07.719 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 01:52:07.719 -07 000000467 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:07.719 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:07.729 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:52:07.858 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:07.858 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:07.858 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:07.858 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:07.858 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 01:52:07.858 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:07.858 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:07.858 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:07.858 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:07.858 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 01:52:07.878 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.03576, 17-03-18 01:52:08.048 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:08.048 -07 000000447 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:08.048 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28630 150' command took 2 ms to send, 1305 ms to get response, and 1314 ms overall 17-03-18 01:52:08.048 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:52:08.048 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 11 at Y-position 67.37158203125, Z-Position -0.130268032406581. ------ 17-03-18 01:52:08.058 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:08.058 -07 000000447 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13661 mm 17-03-18 01:52:08.058 -07 000000447 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:08.058 -07 000000512 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:08.058 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True) 17-03-18 01:52:08.058 -07 000000629 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm 17-03-18 01:52:08.058 -07 000000592 INF: Z Motor: Entering MoveAbsStepped (DAC = 29843, sync = True, waitForSettling = False) 17-03-18 01:52:08.058 -07 000000592 INF: Z Motor: Moving to -0.136612 mm, started at -0.130268 mm, distance = -6.34 um 17-03-18 01:52:08.068 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:08.068 -07 000000592 INF: FPGA: Xmit ZDACW 29843\n [Z Motor] 17-03-18 01:52:08.068 -07 000000512 INF: FPGA: Recv ZDACW 17-03-18 01:52:08.078 -07 000000592 INF: FPGA: 'ZDACW 29843' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 01:52:08.078 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:08.078 -07 000000444 INF: FPGA: Recv YRDPOS 137977 17-03-18 01:52:08.088 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:52:08.088 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 01:52:08.088 -07 000000629 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:08.088 -07 000000629 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:08.088 -07 000000629 INF: Y Motor: Moving 1346 steps-24 17-03-18 01:52:08.098 -07 000000592 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:08.098 -07 000000576 INF: FPGA: Recv ZDACR 29843 17-03-18 01:52:08.108 -07 000000592 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:08.108 -07 000000592 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet)) 17-03-18 01:52:08.108 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:08.238 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 380 ms. 17-03-18 01:52:08.238 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms. 17-03-18 01:52:08.238 -07 000000618 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:08.238 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 379 ms. 17-03-18 01:52:08.238 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms. 17-03-18 01:52:08.238 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:08.248 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:52:08.248 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 01:52:08.248 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:52:08.248 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:52:08.287 -07 000000444 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:52:08.287 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 01:52:08.477 -07 000000467 INF: FPGA: Recv YMVTILE 17-03-18 01:52:08.477 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:52:08.527 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:08.527 -07 000000561 INF: FPGA: Recv YRDPOS 139682 17-03-18 01:52:08.537 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:08.537 -07 000000629 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:08.537 -07 000000629 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm) 17-03-18 01:52:08.537 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.841 mm, average velocity = 2.118 mm/sec 17-03-18 01:52:09.485 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:09.485 -07 000000480 INF: FPGA: Recv YRDPOS 139683 17-03-18 01:52:09.495 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:09.495 -07 000000629 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:09.515 -07 000000629 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:09.515 -07 000000629 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:52:09.515 -07 000000629 INF: Y Motor: Moved to 68.2046 after 1462 ms (table move) 17-03-18 01:52:09.525 -07 000000447 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136612 mm (DAC = 29843) 17-03-18 01:52:09.525 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.525 -07 000000606 INF: FPGA: Recv ZSGSRD 30548 17-03-18 01:52:09.535 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.535 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.535 -07 000000629 INF: FPGA: Recv ZSGSRD 30559 17-03-18 01:52:09.545 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.545 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.545 -07 000000606 INF: FPGA: Recv ZSGSRD 30551 17-03-18 01:52:09.555 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.555 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.555 -07 000000561 INF: FPGA: Recv ZSGSRD 30557 17-03-18 01:52:09.565 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.565 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.565 -07 000000606 INF: FPGA: Recv ZSGSRD 30553 17-03-18 01:52:09.575 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.575 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.575 -07 000000561 INF: FPGA: Recv ZSGSRD 30547 17-03-18 01:52:09.585 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.585 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.585 -07 000000592 INF: FPGA: Recv ZSGSRD 30559 17-03-18 01:52:09.595 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.595 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.595 -07 000000629 INF: FPGA: Recv ZSGSRD 30556 17-03-18 01:52:09.605 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.605 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.605 -07 000000592 INF: FPGA: Recv ZSGSRD 30561 17-03-18 01:52:09.615 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.615 -07 000000447 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:09.615 -07 000000618 INF: FPGA: Recv ZSGSRD 30559 17-03-18 01:52:09.625 -07 000000447 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:09.625 -07 000000447 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:09.625 -07 000000629 INF: FPGA: Recv ZPIEZORD 26376 17-03-18 01:52:09.635 -07 000000447 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:09.635 -07 000000447 INF: Z Motor: Piezo is near 36.3 V (nominally 0 to 100 V), expect near 45.5 V, since DAC is at 4.554 V. Piezo Error = -9.2 V. 17-03-18 01:52:09.635 -07 000000447 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.6 um, Read 10 ADC samples: Avg = 30555 (-135.8 uncal um), Error = 0.8 uncal um, Median = 30556 (-135.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30547 (-135.8 uncal um), Max = 30561 (-135.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:52:09.635 -07 000000447 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30555, posNoise = 6, negNoise = 8 17-03-18 01:52:09.635 -07 000000447 INF: Z Motor: After move to -0.136612, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:09.635 -07 000000447 INF: Z Motor: Settle wait time = 1464 ms, measure time = 112 ms (allowed 150 ms), total time = 1576 ms 17-03-18 01:52:09.635 -07 000000447 INF: Z Motor: Waiting extra 38 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:09.675 -07 000000447 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms 17-03-18 01:52:09.675 -07 000000447 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:09.675 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:09.675 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:09.675 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:09.675 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:09.675 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:52:09.675 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:09.675 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:09.675 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:52:09.685 -07 000000618 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:09.685 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:52:09.695 -07 000000618 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms. 17-03-18 01:52:09.695 -07 000000618 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 18 ms. 17-03-18 01:52:09.695 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:52:09.745 -07 000000629 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:52:10.044 -07 000000447 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:52:10.044 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:52:10.044 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:52:10.164 -07 000000629 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:52:10.164 -07 000000629 INF: FPGA: Recv CAMSNAP 17-03-18 01:52:10.164 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 466 ms to get response, and 468 ms overall 17-03-18 01:52:10.164 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start. 17-03-18 01:52:10.294 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 01:52:10.294 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:10.294 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:52:10.294 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 250 ms. 17-03-18 01:52:10.364 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:10.364 -07 000000606 INF: Autofocus start 17-03-18 01:52:10.364 -07 000000606 INF: MeasureProfile start 17-03-18 01:52:10.364 -07 000000480 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:10.374 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:10.374 -07 000000447 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:52:10.374 -07 000000606 INF: MeasureProfile done 17-03-18 01:52:10.374 -07 000000606 INF: X=48 Z correction [um]=0.2069503 17-03-18 01:52:10.374 -07 000000606 INF: Autofocus finished 17-03-18 01:52:10.573 -07 000000626 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:52:10.573 -07 000000447 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 204 ms overall 17-03-18 01:52:10.573 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.136615154002641. ---------- 17-03-18 01:52:10.573 -07 000000610 INF: Cycle 92 Tile 11 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:10.583 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28401, sync = True, waitForSettling = True) 17-03-18 01:52:10.583 -07 000000610 INF: Z Motor: Moving to -0.130011 mm, started at -0.136615 mm, distance = 6.60 um 17-03-18 01:52:10.583 -07 000000610 INF: FPGA: Xmit ZDACW 28401\n [Z Motor] 17-03-18 01:52:10.583 -07 000000606 INF: FPGA: Recv ZDACW 17-03-18 01:52:10.593 -07 000000610 INF: FPGA: 'ZDACW 28401' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:10.593 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:10.593 -07 000000576 INF: FPGA: Recv ZDACR 28401 17-03-18 01:52:10.603 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.603 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:10.753 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.753 -07 000000447 INF: FPGA: Recv ZSGSRD 29526 17-03-18 01:52:10.763 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:10.763 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.763 -07 000000576 INF: FPGA: Recv ZSGSRD 29530 17-03-18 01:52:10.773 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.773 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.773 -07 000000447 INF: FPGA: Recv ZSGSRD 29520 17-03-18 01:52:10.783 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.783 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.783 -07 000000576 INF: FPGA: Recv ZSGSRD 29528 17-03-18 01:52:10.793 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.793 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.793 -07 000000447 INF: FPGA: Recv ZSGSRD 29538 17-03-18 01:52:10.803 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.803 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.803 -07 000000576 INF: FPGA: Recv ZSGSRD 29526 17-03-18 01:52:10.813 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.813 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.813 -07 000000447 INF: FPGA: Recv ZSGSRD 29533 17-03-18 01:52:10.823 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.823 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.823 -07 000000447 INF: FPGA: Recv ZSGSRD 29530 17-03-18 01:52:10.833 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.833 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.833 -07 000000447 INF: FPGA: Recv ZSGSRD 29528 17-03-18 01:52:10.843 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.843 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:10.843 -07 000000447 INF: FPGA: Recv ZSGSRD 29531 17-03-18 01:52:10.853 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.853 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:10.853 -07 000000447 INF: FPGA: Recv ZPIEZORD 25069 17-03-18 01:52:10.863 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:10.863 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.334 V. Piezo Error = -9.8 V. 17-03-18 01:52:10.863 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.0 um, Read 10 ADC samples: Avg = 29529 (-129.2 uncal um), Error = 0.8 uncal um, Median = 29529 (-129.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29520 (-129.2 uncal um), Max = 29538 (-129.3 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 01:52:10.863 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29529, posNoise = 9, negNoise = 9 17-03-18 01:52:10.863 -07 000000610 INF: Z Motor: After move to -0.130011, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:10.863 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 01:52:10.863 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:10.863 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:10.863 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:10.863 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:10.863 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:10.863 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:10.863 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:10.863 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:10.863 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:10.863 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:10.863 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:10.863 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:10.873 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:10.873 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:10.873 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:10.873 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:10.873 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 01:52:10.873 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 12 ms. 17-03-18 01:52:10.883 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 01:52:10.883 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:52:10.883 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28577 150\n [Camera] 17-03-18 01:52:11.082 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:11.472 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:11.472 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:11.472 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:11.472 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:11.472 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:11.472 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:11.482 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:11.482 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:52:11.482 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:11.482 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:52:11.871 -07 000000447 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 388 ms. 17-03-18 01:52:11.871 -07 000000447 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms. 17-03-18 01:52:11.871 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:11.871 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 386 ms. 17-03-18 01:52:11.871 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 01:52:11.871 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:11.871 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:11.871 -07 000000447 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 01:52:11.871 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:11.881 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms. 17-03-18 01:52:11.881 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28577 777 17-03-18 01:52:11.881 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:11.921 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:11.921 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:12.001 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:12.001 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:12.001 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:12.001 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:12.001 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start. 17-03-18 01:52:12.001 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:12.001 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:12.001 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:12.001 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:12.001 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:52:12.190 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:12.190 -07 000000501 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:12.190 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28577 150' command took 2 ms to send, 1307 ms to get response, and 1314 ms overall 17-03-18 01:52:12.190 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130631 17-03-18 01:52:12.190 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13063 mm 17-03-18 01:52:12.190 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:12.310 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28536, sync = True, waitForSettling = False) 17-03-18 01:52:12.310 -07 000000501 INF: Z Motor: Moving to -0.130629 mm, started at -0.130024 mm, distance = -0.61 um 17-03-18 01:52:12.310 -07 000000501 INF: FPGA: Xmit ZDACW 28536\n [Z Motor] 17-03-18 01:52:12.310 -07 000000447 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True) 17-03-18 01:52:12.310 -07 000000447 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm 17-03-18 01:52:12.310 -07 000000430 INF: FPGA: Recv ZDACW 17-03-18 01:52:12.320 -07 000000501 INF: FPGA: 'ZDACW 28536' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:12.320 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:12.320 -07 000000626 INF: FPGA: Recv ZDACR 28536 17-03-18 01:52:12.330 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:12.330 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:12.330 -07 000000501 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet)) 17-03-18 01:52:12.330 -07 000000467 INF: FPGA: Recv YRDPOS 139683 17-03-18 01:52:12.340 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 01:52:12.340 -07 000000447 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:12.340 -07 000000447 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:12.340 -07 000000447 INF: Y Motor: Moving 1341 steps-17 17-03-18 01:52:12.340 -07 000000447 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:12.400 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 390 ms. 17-03-18 01:52:12.400 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms. 17-03-18 01:52:12.400 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:12.400 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 394 ms. 17-03-18 01:52:12.400 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-18 01:52:12.400 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:12.400 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:12.400 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms. 17-03-18 01:52:12.400 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:52:12.410 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms. 17-03-18 01:52:12.709 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 01:52:12.709 -07 000000447 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall 17-03-18 01:52:12.759 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:12.759 -07 000000501 INF: FPGA: Recv YRDPOS 141366 17-03-18 01:52:12.769 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:12.769 -07 000000447 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:12.769 -07 000000447 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm) 17-03-18 01:52:12.769 -07 000000447 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.217 mm/sec 17-03-18 01:52:13.238 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.024884, 17-03-18 01:52:13.717 -07 000000447 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:13.717 -07 000000467 INF: FPGA: Recv YRDPOS 141367 17-03-18 01:52:13.727 -07 000000447 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:13.727 -07 000000447 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:13.747 -07 000000447 INF: Y Motor: After move to 69.042610, error = -0.015755, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:13.747 -07 000000447 INF: Y Motor: Position error after settling (table move) = -32 encoder counts (-0.016 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:52:13.747 -07 000000447 INF: Y Motor: Moved to 69.0269 after 1445 ms (table move) 17-03-18 01:52:13.757 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130629 mm (DAC = 28536) 17-03-18 01:52:13.757 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:13.757 -07 000000430 INF: FPGA: Recv ZSGSRD 29618 17-03-18 01:52:13.767 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:13.767 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:13.767 -07 000000447 INF: FPGA: Recv ZSGSRD 29629 17-03-18 01:52:13.777 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:13.777 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:13.777 -07 000000626 INF: FPGA: Recv ZSGSRD 29627 17-03-18 01:52:13.787 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:13.787 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.326 -07 000000501 INF: FPGA: Recv ZSGSRD 29621 17-03-18 01:52:14.326 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 530 ms to get response, and 540 ms overall 17-03-18 01:52:14.326 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.326 -07 000000579 INF: FPGA: Recv ZSGSRD 29630 17-03-18 01:52:14.336 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.336 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.336 -07 000000424 INF: FPGA: Recv ZSGSRD 29629 17-03-18 01:52:14.346 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.346 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.346 -07 000000579 INF: FPGA: Recv ZSGSRD 29629 17-03-18 01:52:14.356 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.356 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.356 -07 000000629 INF: FPGA: Recv ZSGSRD 29620 17-03-18 01:52:14.366 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.366 -07 000000579 INF: FPGA: Recv ZSGSRD 29628 17-03-18 01:52:14.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.376 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.376 -07 000000424 INF: FPGA: Recv ZSGSRD 29629 17-03-18 01:52:14.386 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.386 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:14.386 -07 000000626 INF: FPGA: Recv ZPIEZORD 25237 17-03-18 01:52:14.396 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -9.6 V. 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29626 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29628 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29618 (-129.8 uncal um), Max = 29630 (-129.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29626, posNoise = 4, negNoise = 8 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: After move to -0.130629, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 639 ms (allowed 150 ms), total time = 2087 ms 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: Warning: Actual position measuring time = 639 ms, longer than max expected time of 150 ms 17-03-18 01:52:14.396 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2201 ms 17-03-18 01:52:14.396 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:14.396 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02685546875, Z-position -0.130647060922945. ---------- 17-03-18 01:52:14.396 -07 000000610 INF: Cycle 92 Tile 12 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28360, sync = True, waitForSettling = True) 17-03-18 01:52:14.396 -07 000000610 INF: Z Motor: Moving to -0.129824 mm, started at -0.130647 mm, distance = 0.82 um 17-03-18 01:52:14.396 -07 000000610 INF: FPGA: Xmit ZDACW 28360\n [Z Motor] 17-03-18 01:52:14.396 -07 000000467 INF: FPGA: Recv ZDACW 17-03-18 01:52:14.406 -07 000000610 INF: FPGA: 'ZDACW 28360' command took 0 ms to send, 0 ms to get response, and 2 ms overall 17-03-18 01:52:14.406 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:14.406 -07 000000501 INF: FPGA: Recv ZDACR 28360 17-03-18 01:52:14.416 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.416 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:14.566 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.566 -07 000000629 INF: FPGA: Recv ZSGSRD 29502 17-03-18 01:52:14.576 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.576 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.576 -07 000000626 INF: FPGA: Recv ZSGSRD 29495 17-03-18 01:52:14.586 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.586 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.586 -07 000000629 INF: FPGA: Recv ZSGSRD 29502 17-03-18 01:52:14.596 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.596 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.596 -07 000000626 INF: FPGA: Recv ZSGSRD 29496 17-03-18 01:52:14.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.606 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.606 -07 000000576 INF: FPGA: Recv ZSGSRD 29500 17-03-18 01:52:14.616 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.616 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.616 -07 000000629 INF: FPGA: Recv ZSGSRD 29495 17-03-18 01:52:14.626 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.626 -07 000000576 INF: FPGA: Recv ZSGSRD 29501 17-03-18 01:52:14.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.636 -07 000000501 INF: FPGA: Recv ZSGSRD 29504 17-03-18 01:52:14.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.646 -07 000000626 INF: FPGA: Recv ZSGSRD 29498 17-03-18 01:52:14.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:14.656 -07 000000579 INF: FPGA: Recv ZSGSRD 29496 17-03-18 01:52:14.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.666 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:14.666 -07 000000467 INF: FPGA: Recv ZPIEZORD 25072 17-03-18 01:52:14.676 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:14.676 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.327 V. Piezo Error = -9.7 V. 17-03-18 01:52:14.676 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.8 um, Read 10 ADC samples: Avg = 29499 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29499 (-129.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29495 (-129.0 uncal um), Max = 29504 (-129.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:52:14.676 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29499, posNoise = 5, negNoise = 4 17-03-18 01:52:14.676 -07 000000610 INF: Z Motor: After move to -0.129824, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:14.676 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms) 17-03-18 01:52:14.676 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:14.676 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:14.676 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:14.676 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:14.676 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:14.676 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:14.676 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:14.676 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:14.676 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:14.676 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:14.676 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:14.676 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:14.686 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:14.686 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:14.686 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:14.686 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:14.686 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 01:52:14.695 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:52:14.695 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 01:52:14.695 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:52:14.695 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28536 150\n [Camera] 17-03-18 01:52:14.895 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:15.284 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:15.284 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:15.284 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:15.284 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:15.284 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:15.284 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:15.284 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:15.284 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:52:15.294 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:15.294 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:52:15.474 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28536 777 17-03-18 01:52:15.624 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:15.684 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 394 ms. 17-03-18 01:52:15.684 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms. 17-03-18 01:52:15.684 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:15.684 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:15.684 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 01:52:15.684 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 394 ms. 17-03-18 01:52:15.684 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:52:15.684 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:15.694 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:15.694 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms. 17-03-18 01:52:15.813 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:15.813 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:15.813 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:15.813 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:15.813 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start. 17-03-18 01:52:15.823 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:15.823 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:15.823 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:15.823 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:15.823 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start. 17-03-18 01:52:16.003 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:16.003 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:16.003 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28536 150' command took 2 ms to send, 1306 ms to get response, and 1314 ms overall 17-03-18 01:52:16.003 -07 000000610 INF: Skipping AutoFocus in Tile 13: adopting Best-Z from the cache: -0.130271 17-03-18 01:52:16.003 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13027 mm 17-03-18 01:52:16.003 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:16.013 -07 000000576 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True) 17-03-18 01:52:16.013 -07 000000576 INF: Y Motor: Moving to 69.8726 mm, started at 69.0269 mm, delta = 0.8458 mm 17-03-18 01:52:16.013 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:16.013 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 28458, sync = True, waitForSettling = False) 17-03-18 01:52:16.013 -07 000000579 INF: Z Motor: Moving to -0.130272 mm, started at -0.129831 mm, distance = -0.44 um 17-03-18 01:52:16.013 -07 000000480 INF: FPGA: Recv YRDPOS 141367 17-03-18 01:52:16.023 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:16.023 -07 000000576 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:16.023 -07 000000576 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:16.023 -07 000000576 INF: Y Motor: Moving 1353 steps-33 17-03-18 01:52:16.023 -07 000000579 INF: FPGA: Xmit ZDACW 28458\n [Z Motor] 17-03-18 01:52:16.023 -07 000000480 INF: FPGA: Recv ZDACW 17-03-18 01:52:16.033 -07 000000579 INF: FPGA: 'ZDACW 28458' command took 1 ms to send, 0 ms to get response, and 17 ms overall 17-03-18 01:52:16.033 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:16.033 -07 000000467 INF: FPGA: Recv ZDACR 28458 17-03-18 01:52:16.043 -07 000000576 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:16.043 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:16.043 -07 000000579 INF: Z Motor: MoveAbsStepped took 28 ms (did NOT wait for settling yet)) 17-03-18 01:52:16.213 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 397 ms. 17-03-18 01:52:16.213 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:52:16.213 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:16.213 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 01:52:16.213 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 01:52:16.213 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:16.223 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:16.223 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms. 17-03-18 01:52:16.223 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:52:16.233 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 409 ms. 17-03-18 01:52:16.412 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 01:52:16.412 -07 000000576 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:52:16.462 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:16.462 -07 000000467 INF: FPGA: Recv YRDPOS 143079 17-03-18 01:52:16.472 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:16.472 -07 000000576 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:16.472 -07 000000576 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm) 17-03-18 01:52:16.472 -07 000000576 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.130 mm/sec 17-03-18 01:52:16.911 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:16.911 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:17.420 -07 000000576 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:17.420 -07 000000579 INF: FPGA: Recv YRDPOS 143079 17-03-18 01:52:17.430 -07 000000576 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:17.430 -07 000000576 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:17.450 -07 000000576 INF: Y Motor: After move to 69.872612, error = -0.009819, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:17.450 -07 000000576 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:52:17.450 -07 000000576 INF: Y Motor: Moved to 69.8628 after 1447 ms (table move) 17-03-18 01:52:17.460 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130272 mm (DAC = 28458) 17-03-18 01:52:17.460 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.460 -07 000000424 INF: FPGA: Recv ZSGSRD 29569 17-03-18 01:52:17.470 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.470 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.470 -07 000000626 INF: FPGA: Recv ZSGSRD 29569 17-03-18 01:52:17.480 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.480 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.480 -07 000000579 INF: FPGA: Recv ZSGSRD 29576 17-03-18 01:52:17.490 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.490 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.490 -07 000000576 INF: FPGA: Recv ZSGSRD 29575 17-03-18 01:52:17.500 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.500 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.500 -07 000000501 INF: FPGA: Recv ZSGSRD 29566 17-03-18 01:52:17.510 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.510 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.510 -07 000000480 INF: FPGA: Recv ZSGSRD 29564 17-03-18 01:52:17.520 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.520 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.520 -07 000000629 INF: FPGA: Recv ZSGSRD 29568 17-03-18 01:52:17.530 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.530 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.530 -07 000000576 INF: FPGA: Recv ZSGSRD 29574 17-03-18 01:52:17.540 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.540 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.540 -07 000000579 INF: FPGA: Recv ZSGSRD 29569 17-03-18 01:52:17.550 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.550 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.550 -07 000000618 INF: FPGA: Recv ZSGSRD 29575 17-03-18 01:52:17.560 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:17.560 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:17.560 -07 000000629 INF: FPGA: Recv ZPIEZORD 25225 17-03-18 01:52:17.570 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.570 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.4 V, since DAC is at 4.342 V. Piezo Error = -9.5 V. 17-03-18 01:52:17.570 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.3 um, Read 10 ADC samples: Avg = 29570 (-129.5 uncal um), Error = 0.8 uncal um, Median = 29569 (-129.5 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29564 (-129.5 uncal um), Max = 29576 (-129.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:52:17.570 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29570, posNoise = 6, negNoise = 6 17-03-18 01:52:17.570 -07 000000610 INF: Z Motor: After move to -0.130272, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:17.570 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 111 ms (allowed 150 ms), total time = 1559 ms 17-03-18 01:52:17.570 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:17.610 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms 17-03-18 01:52:17.610 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:17.610 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86279296875, Z-position -0.130287305043007. ---------- 17-03-18 01:52:17.610 -07 000000610 INF: Cycle 92 Tile 13 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:17.610 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28281, sync = True, waitForSettling = True) 17-03-18 01:52:17.620 -07 000000610 INF: Z Motor: Moving to -0.129462 mm, started at -0.130287 mm, distance = 0.83 um 17-03-18 01:52:17.620 -07 000000610 INF: FPGA: Xmit ZDACW 28281\n [Z Motor] 17-03-18 01:52:17.620 -07 000000501 INF: FPGA: Recv ZDACW 17-03-18 01:52:17.630 -07 000000610 INF: FPGA: 'ZDACW 28281' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.630 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:17.630 -07 000000501 INF: FPGA: Recv ZDACR 28281 17-03-18 01:52:17.640 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.640 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:17.790 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.790 -07 000000629 INF: FPGA: Recv ZSGSRD 29437 17-03-18 01:52:17.800 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:17.800 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.800 -07 000000501 INF: FPGA: Recv ZSGSRD 29442 17-03-18 01:52:17.810 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.810 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.810 -07 000000480 INF: FPGA: Recv ZSGSRD 29444 17-03-18 01:52:17.820 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.820 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.820 -07 000000618 INF: FPGA: Recv ZSGSRD 29438 17-03-18 01:52:17.830 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.830 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.830 -07 000000626 INF: FPGA: Recv ZSGSRD 29441 17-03-18 01:52:17.840 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.840 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.840 -07 000000629 INF: FPGA: Recv ZSGSRD 29443 17-03-18 01:52:17.850 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.850 -07 000000626 INF: FPGA: Recv ZSGSRD 29442 17-03-18 01:52:17.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.860 -07 000000618 INF: FPGA: Recv ZSGSRD 29446 17-03-18 01:52:17.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.870 -07 000000579 INF: FPGA: Recv ZSGSRD 29449 17-03-18 01:52:17.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:17.880 -07 000000629 INF: FPGA: Recv ZSGSRD 29440 17-03-18 01:52:17.889 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.889 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:17.889 -07 000000480 INF: FPGA: Recv ZPIEZORD 25026 17-03-18 01:52:17.899 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:17.899 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.315 V. Piezo Error = -9.7 V. 17-03-18 01:52:17.899 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.5 um, Read 10 ADC samples: Avg = 29442 (-128.7 uncal um), Error = 0.8 uncal um, Median = 29442 (-128.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29437 (-128.7 uncal um), Max = 29449 (-128.7 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:52:17.899 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29442, posNoise = 7, negNoise = 5 17-03-18 01:52:17.899 -07 000000610 INF: Z Motor: After move to -0.129462, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:17.899 -07 000000610 INF: Z Motor: MoveAbsStepped took 283 ms) 17-03-18 01:52:17.899 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:17.899 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:17.899 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:17.899 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:17.899 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:17.899 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:17.899 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:17.899 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:17.899 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:52:17.899 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:17.899 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:17.899 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:17.909 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:17.909 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:17.909 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:17.909 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:17.919 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms. 17-03-18 01:52:17.919 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms. 17-03-18 01:52:17.919 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-18 01:52:17.919 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 01:52:17.919 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28458 150\n [Camera] 17-03-18 01:52:18.119 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:18.508 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:18.508 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:18.518 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:18.518 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:18.518 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start. 17-03-18 01:52:18.518 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:18.518 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:18.518 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:18.518 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:18.518 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start. 17-03-18 01:52:18.598 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.997626, 17-03-18 01:52:18.708 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28458 777 17-03-18 01:52:18.858 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:18.898 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 384 ms. 17-03-18 01:52:18.898 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms. 17-03-18 01:52:18.898 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:18.898 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 388 ms. 17-03-18 01:52:18.898 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms. 17-03-18 01:52:18.898 -07 000000424 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:18.908 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:18.908 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:18.908 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 393 ms. 17-03-18 01:52:18.908 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 01:52:19.037 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:19.047 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:19.047 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:19.047 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:19.047 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start. 17-03-18 01:52:19.047 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:19.047 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:19.047 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:19.047 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:19.047 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start. 17-03-18 01:52:19.237 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:52:19.237 -07 000000480 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:19.237 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28458 150' command took 2 ms to send, 1302 ms to get response, and 1314 ms overall 17-03-18 01:52:19.237 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129355 17-03-18 01:52:19.237 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12936 mm 17-03-18 01:52:19.237 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:19.237 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True) 17-03-18 01:52:19.237 -07 000000626 INF: Y Motor: Moving to 70.7026 mm, started at 69.8628 mm, delta = 0.8398 mm 17-03-18 01:52:19.237 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:19.237 -07 000000480 INF: Z Motor: Entering MoveAbsStepped (DAC = 28258, sync = True, waitForSettling = False) 17-03-18 01:52:19.237 -07 000000480 INF: Z Motor: Moving to -0.129357 mm, started at -0.129465 mm, distance = 0.11 um 17-03-18 01:52:19.247 -07 000000480 INF: FPGA: Xmit ZDACW 28258\n [Z Motor] 17-03-18 01:52:19.247 -07 000000424 INF: FPGA: Recv YRDPOS 143079 17-03-18 01:52:19.247 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:52:19.247 -07 000000626 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:19.247 -07 000000626 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:19.247 -07 000000626 INF: Y Motor: Moving 1344 steps-20 17-03-18 01:52:19.247 -07 000000579 INF: FPGA: Recv ZDACW 17-03-18 01:52:19.257 -07 000000480 INF: FPGA: 'ZDACW 28258' command took 0 ms to send, 0 ms to get response, and 11 ms overall 17-03-18 01:52:19.257 -07 000000480 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:19.257 -07 000000579 INF: FPGA: Recv ZDACR 28258 17-03-18 01:52:19.267 -07 000000480 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:19.267 -07 000000480 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet)) 17-03-18 01:52:19.267 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:19.447 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 403 ms. 17-03-18 01:52:19.447 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:52:19.447 -07 000000467 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:19.447 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 402 ms. 17-03-18 01:52:19.447 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:52:19.447 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:19.447 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:19.447 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 408 ms. 17-03-18 01:52:19.457 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:19.457 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms. 17-03-18 01:52:19.636 -07 000000579 INF: FPGA: Recv YMVTILE 17-03-18 01:52:19.636 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 396 ms overall 17-03-18 01:52:19.686 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:19.686 -07 000000501 INF: FPGA: Recv YRDPOS 144769 17-03-18 01:52:19.696 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:19.696 -07 000000626 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:19.696 -07 000000626 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 01:52:19.696 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.840 mm, average velocity = 2.121 mm/sec 17-03-18 01:52:20.644 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:20.644 -07 000000501 INF: FPGA: Recv YRDPOS 144769 17-03-18 01:52:20.654 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:20.654 -07 000000626 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:20.674 -07 000000626 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:20.674 -07 000000626 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:52:20.674 -07 000000626 INF: Y Motor: Moved to 70.6880 after 1440 ms (table move) 17-03-18 01:52:20.684 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129357 mm (DAC = 28258) 17-03-18 01:52:20.684 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.684 -07 000000579 INF: FPGA: Recv ZSGSRD 29421 17-03-18 01:52:20.694 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:20.694 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.694 -07 000000501 INF: FPGA: Recv ZSGSRD 29425 17-03-18 01:52:20.704 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.704 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.704 -07 000000467 INF: FPGA: Recv ZSGSRD 29431 17-03-18 01:52:20.714 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.714 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.714 -07 000000467 INF: FPGA: Recv ZSGSRD 29427 17-03-18 01:52:20.724 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.724 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.724 -07 000000480 INF: FPGA: Recv ZSGSRD 29421 17-03-18 01:52:20.734 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.734 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.734 -07 000000501 INF: FPGA: Recv ZSGSRD 29426 17-03-18 01:52:20.744 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.744 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.744 -07 000000467 INF: FPGA: Recv ZSGSRD 29427 17-03-18 01:52:20.754 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.754 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.754 -07 000000501 INF: FPGA: Recv ZSGSRD 29426 17-03-18 01:52:20.764 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.764 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.764 -07 000000579 INF: FPGA: Recv ZSGSRD 29426 17-03-18 01:52:20.774 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.774 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:20.774 -07 000000467 INF: FPGA: Recv ZSGSRD 29430 17-03-18 01:52:20.784 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.784 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:20.784 -07 000000626 INF: FPGA: Recv ZPIEZORD 24994 17-03-18 01:52:20.794 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.794 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.312 V. Piezo Error = -9.7 V. 17-03-18 01:52:20.794 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.4 um, Read 10 ADC samples: Avg = 29426 (-128.6 uncal um), Error = 0.8 uncal um, Median = 29426 (-128.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29421 (-128.6 uncal um), Max = 29431 (-128.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um) 17-03-18 01:52:20.794 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29426, posNoise = 5, negNoise = 5 17-03-18 01:52:20.794 -07 000000610 INF: Z Motor: After move to -0.129357, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:20.794 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 109 ms (allowed 150 ms), total time = 1551 ms 17-03-18 01:52:20.794 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:20.844 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1605 ms 17-03-18 01:52:20.844 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:20.844 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.129362218494593. ---------- 17-03-18 01:52:20.844 -07 000000610 INF: Cycle 92 Tile 14 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:20.844 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28081, sync = True, waitForSettling = True) 17-03-18 01:52:20.844 -07 000000610 INF: Z Motor: Moving to -0.128547 mm, started at -0.129362 mm, distance = 0.82 um 17-03-18 01:52:20.844 -07 000000610 INF: FPGA: Xmit ZDACW 28081\n [Z Motor] 17-03-18 01:52:20.844 -07 000000626 INF: FPGA: Recv ZDACW 17-03-18 01:52:20.854 -07 000000610 INF: FPGA: 'ZDACW 28081' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:52:20.854 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:20.854 -07 000000579 INF: FPGA: Recv ZDACR 28081 17-03-18 01:52:20.864 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:20.864 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:21.014 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.014 -07 000000591 INF: FPGA: Recv ZSGSRD 29299 17-03-18 01:52:21.024 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:21.024 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.024 -07 000000480 INF: FPGA: Recv ZSGSRD 29305 17-03-18 01:52:21.034 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.034 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.034 -07 000000591 INF: FPGA: Recv ZSGSRD 29298 17-03-18 01:52:21.044 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.044 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.044 -07 000000501 INF: FPGA: Recv ZSGSRD 29298 17-03-18 01:52:21.054 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.054 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.054 -07 000000591 INF: FPGA: Recv ZSGSRD 29300 17-03-18 01:52:21.064 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.064 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.064 -07 000000480 INF: FPGA: Recv ZSGSRD 29297 17-03-18 01:52:21.074 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.074 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.074 -07 000000626 INF: FPGA: Recv ZSGSRD 29302 17-03-18 01:52:21.084 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.084 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.084 -07 000000501 INF: FPGA: Recv ZSGSRD 29297 17-03-18 01:52:21.093 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.093 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.093 -07 000000591 INF: FPGA: Recv ZSGSRD 29301 17-03-18 01:52:21.103 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.103 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:21.103 -07 000000480 INF: FPGA: Recv ZSGSRD 29300 17-03-18 01:52:21.113 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.113 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:21.113 -07 000000626 INF: FPGA: Recv ZPIEZORD 24817 17-03-18 01:52:21.123 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:21.123 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.285 V. Piezo Error = -9.8 V. 17-03-18 01:52:21.123 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29300 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29300 (-127.8 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29297 (-127.8 uncal um), Max = 29305 (-127.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 01:52:21.123 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29300, posNoise = 5, negNoise = 3 17-03-18 01:52:21.123 -07 000000610 INF: Z Motor: After move to -0.128547, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:21.123 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms) 17-03-18 01:52:21.123 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:21.123 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:21.123 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:21.123 -07 000000579 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:21.123 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:21.123 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:21.123 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:21.123 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:21.123 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms. 17-03-18 01:52:21.123 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:21.123 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms. 17-03-18 01:52:21.123 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:21.133 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:21.133 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:21.133 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:21.133 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:21.143 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:52:21.143 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:52:21.143 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:52:21.143 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:52:21.153 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28258 150\n [Camera] 17-03-18 01:52:21.343 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:21.742 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:21.742 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:21.742 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:21.742 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:21.742 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start. 17-03-18 01:52:21.742 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:21.742 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:21.742 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:21.742 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:21.742 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start. 17-03-18 01:52:21.902 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:21.902 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:21.932 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28258 777 17-03-18 01:52:22.082 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning grn on 930 17-03-18 01:52:22.122 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 376 ms. 17-03-18 01:52:22.122 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms. 17-03-18 01:52:22.122 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:22.122 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 374 ms. 17-03-18 01:52:22.122 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms. 17-03-18 01:52:22.122 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:22.122 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:22.122 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms. 17-03-18 01:52:22.122 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:22.132 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms. 17-03-18 01:52:22.271 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:22.271 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:22.271 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:22.271 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:22.271 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start. 17-03-18 01:52:22.271 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:22.271 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:22.271 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:22.271 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:22.271 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start. 17-03-18 01:52:22.461 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:22.461 -07 000000512 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:22.461 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28258 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:52:22.461 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:52:22.461 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 15 at Y-position 70.68798828125, Z-Position -0.128552767764731. ------ 17-03-18 01:52:22.461 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:22.461 -07 000000591 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.13525 mm 17-03-18 01:52:22.461 -07 000000591 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:22.471 -07 000000467 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:22.471 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 01:52:22.471 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 29545, sync = True, waitForSettling = False) 17-03-18 01:52:22.471 -07 000000579 INF: Z Motor: Moving to -0.135248 mm, started at -0.128553 mm, distance = -6.70 um 17-03-18 01:52:22.471 -07 000000579 INF: FPGA: Xmit ZDACW 29545\n [Z Motor] 17-03-18 01:52:22.471 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True) 17-03-18 01:52:22.471 -07 000000501 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm 17-03-18 01:52:22.471 -07 000000444 INF: FPGA: Recv ZDACW 17-03-18 01:52:22.481 -07 000000579 INF: FPGA: 'ZDACW 29545' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:22.481 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:22.481 -07 000000444 INF: FPGA: Recv ZDACR 29545 17-03-18 01:52:22.491 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:22.491 -07 000000579 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet)) 17-03-18 01:52:22.491 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:22.491 -07 000000606 INF: FPGA: Recv YRDPOS 144769 17-03-18 01:52:22.501 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 01:52:22.501 -07 000000501 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:22.501 -07 000000501 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:22.501 -07 000000501 INF: Y Motor: Moving 1351 steps-30 17-03-18 01:52:22.501 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:52:22.511 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:22.651 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 379 ms. 17-03-18 01:52:22.651 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms. 17-03-18 01:52:22.651 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:22.651 -07 000000487 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 378 ms. 17-03-18 01:52:22.651 -07 000000487 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms. 17-03-18 01:52:22.651 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:22.661 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:22.661 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms. 17-03-18 01:52:22.661 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:22.661 -07 000000487 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:52:22.700 -07 000000576 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:52:22.700 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 230 ms overall 17-03-18 01:52:22.880 -07 000000480 INF: FPGA: Recv YMVTILE 17-03-18 01:52:22.880 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 388 ms overall 17-03-18 01:52:22.930 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:22.930 -07 000000606 INF: FPGA: Recv YRDPOS 146469 17-03-18 01:52:22.940 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:22.940 -07 000000501 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:22.940 -07 000000501 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 01:52:22.940 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.845 mm, average velocity = 2.177 mm/sec 17-03-18 01:52:23.888 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:23.888 -07 000000430 INF: FPGA: Recv YRDPOS 146470 17-03-18 01:52:23.898 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:23.898 -07 000000501 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:23.918 -07 000000501 INF: Y Motor: After move to 71.532608, error = -0.014053, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:23.918 -07 000000501 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:52:23.918 -07 000000501 INF: Y Motor: Moved to 71.5186 after 1454 ms (table move) 17-03-18 01:52:23.928 -07 000000591 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135248 mm (DAC = 29545) 17-03-18 01:52:23.928 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:23.928 -07 000000430 INF: FPGA: Recv ZSGSRD 30334 17-03-18 01:52:23.938 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:23.938 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:23.938 -07 000000430 INF: FPGA: Recv ZSGSRD 30349 17-03-18 01:52:23.948 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:23.958 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:23.958 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.004458, 17-03-18 01:52:23.958 -07 000000430 INF: FPGA: Recv ZSGSRD 30352 17-03-18 01:52:23.968 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:23.988 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:23.988 -07 000000576 INF: FPGA: Recv ZSGSRD 30341 17-03-18 01:52:23.998 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:23.998 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:23.998 -07 000000430 INF: FPGA: Recv ZSGSRD 30347 17-03-18 01:52:24.008 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.028 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.028 -07 000000501 INF: FPGA: Recv ZSGSRD 30349 17-03-18 01:52:24.038 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:24.038 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.038 -07 000000501 INF: FPGA: Recv ZSGSRD 30346 17-03-18 01:52:24.048 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.048 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.048 -07 000000430 INF: FPGA: Recv ZSGSRD 30338 17-03-18 01:52:24.058 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.058 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.058 -07 000000501 INF: FPGA: Recv ZSGSRD 30339 17-03-18 01:52:24.068 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.068 -07 000000591 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.068 -07 000000576 INF: FPGA: Recv ZSGSRD 30342 17-03-18 01:52:24.078 -07 000000591 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.078 -07 000000591 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:24.078 -07 000000501 INF: FPGA: Recv ZPIEZORD 26194 17-03-18 01:52:24.088 -07 000000591 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.088 -07 000000591 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 45.1 V, since DAC is at 4.508 V. Piezo Error = -9.1 V. 17-03-18 01:52:24.088 -07 000000591 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.2 um, Read 10 ADC samples: Avg = 30344 (-134.5 uncal um), Error = 0.8 uncal um, Median = 30344 (-134.5 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 30334 (-134.4 uncal um), Max = 30352 (-134.5 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 10 (0.1 uncal um) 17-03-18 01:52:24.088 -07 000000591 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30344, posNoise = 8, negNoise = 10 17-03-18 01:52:24.088 -07 000000591 INF: Z Motor: After move to -0.135248, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:24.088 -07 000000591 INF: Z Motor: Settle wait time = 1458 ms, measure time = 159 ms (allowed 150 ms), total time = 1617 ms 17-03-18 01:52:24.088 -07 000000591 INF: Z Motor: Warning: Actual position measuring time = 159 ms, longer than max expected time of 150 ms 17-03-18 01:52:24.088 -07 000000591 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1621 ms 17-03-18 01:52:24.088 -07 000000591 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:24.088 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:24.088 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:24.088 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:24.088 -07 000000430 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:52:24.088 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:24.088 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:24.088 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:24.088 -07 000000430 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:52:24.098 -07 000000430 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:24.098 -07 000000430 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:52:24.108 -07 000000430 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms. 17-03-18 01:52:24.108 -07 000000430 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-18 01:52:24.108 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:52:24.158 -07 000000576 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:52:24.457 -07 000000430 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:52:24.457 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:52:24.457 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:52:24.457 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) start. 17-03-18 01:52:24.497 -07 000000501 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:52:24.497 -07 000000591 INF: FPGA: Recv CAMSNAP 17-03-18 01:52:24.497 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 385 ms overall 17-03-18 01:52:24.587 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 574918816, 0x0, 559484976) end. Duration was 128 ms. 17-03-18 01:52:24.587 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:24.587 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:52:24.587 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms. 17-03-18 01:52:24.597 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:24.597 -07 000000591 INF: Autofocus start 17-03-18 01:52:24.597 -07 000000591 INF: MeasureProfile start 17-03-18 01:52:24.597 -07 000000576 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:24.607 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:24.607 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:52:24.607 -07 000000591 INF: MeasureProfile done 17-03-18 01:52:24.607 -07 000000591 INF: X=128 Z correction [um]=0.5917814 17-03-18 01:52:24.607 -07 000000591 INF: Autofocus finished 17-03-18 01:52:24.807 -07 000000501 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:52:24.807 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:52:24.807 -07 000000610 INF: Suspending Skipping AutoFocus for the next 6 cycles. 17-03-18 01:52:24.807 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.5185546875, Z-position -0.13525964524073. ---------- 17-03-18 01:52:24.807 -07 000000610 INF: Cycle 92 Tile 15 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:24.817 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28187, sync = True, waitForSettling = True) 17-03-18 01:52:24.817 -07 000000610 INF: Z Motor: Moving to -0.129032 mm, started at -0.135260 mm, distance = 6.23 um 17-03-18 01:52:24.817 -07 000000610 INF: FPGA: Xmit ZDACW 28187\n [Z Motor] 17-03-18 01:52:24.817 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:52:24.827 -07 000000610 INF: FPGA: 'ZDACW 28187' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:24.827 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:24.827 -07 000000576 INF: FPGA: Recv ZDACR 28187 17-03-18 01:52:24.836 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.836 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:24.986 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.986 -07 000000591 INF: FPGA: Recv ZSGSRD 29379 17-03-18 01:52:24.996 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:24.996 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:24.996 -07 000000430 INF: FPGA: Recv ZSGSRD 29373 17-03-18 01:52:25.006 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.006 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.006 -07 000000501 INF: FPGA: Recv ZSGSRD 29377 17-03-18 01:52:25.016 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.016 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.016 -07 000000576 INF: FPGA: Recv ZSGSRD 29374 17-03-18 01:52:25.026 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.026 -07 000000501 INF: FPGA: Recv ZSGSRD 29377 17-03-18 01:52:25.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.036 -07 000000430 INF: FPGA: Recv ZSGSRD 29373 17-03-18 01:52:25.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.046 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.046 -07 000000430 INF: FPGA: Recv ZSGSRD 29379 17-03-18 01:52:25.056 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.056 -07 000000501 INF: FPGA: Recv ZSGSRD 29377 17-03-18 01:52:25.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.066 -07 000000576 INF: FPGA: Recv ZSGSRD 29377 17-03-18 01:52:25.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.076 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:25.076 -07 000000629 INF: FPGA: Recv ZSGSRD 29374 17-03-18 01:52:25.086 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.086 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:25.086 -07 000000576 INF: FPGA: Recv ZPIEZORD 24983 17-03-18 01:52:25.096 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:25.096 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.301 V. Piezo Error = -9.6 V. 17-03-18 01:52:25.096 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.0 um, Read 10 ADC samples: Avg = 29376 (-128.3 uncal um), Error = 0.8 uncal um, Median = 29377 (-128.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 29373 (-128.2 uncal um), Max = 29379 (-128.3 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um) 17-03-18 01:52:25.096 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29376, posNoise = 3, negNoise = 3 17-03-18 01:52:25.096 -07 000000610 INF: Z Motor: After move to -0.129032, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:25.096 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 01:52:25.096 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:25.096 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:25.096 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:25.106 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:25.106 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:25.106 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:25.106 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:25.106 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:25.106 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:52:25.106 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:25.106 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:25.106 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:25.106 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:25.106 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:25.106 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:25.106 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:25.116 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms. 17-03-18 01:52:25.116 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms. 17-03-18 01:52:25.116 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms. 17-03-18 01:52:25.116 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:52:25.116 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28364 150\n [Camera] 17-03-18 01:52:25.316 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:25.705 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:25.715 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:25.715 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:25.715 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:25.715 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start. 17-03-18 01:52:25.715 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:25.715 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:25.715 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:25.715 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:25.715 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start. 17-03-18 01:52:25.904 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28364 777 17-03-18 01:52:26.054 -07 000000487 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:26.104 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 01:52:26.104 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 01:52:26.104 -07 000000591 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:26.104 -07 000000447 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 390 ms. 17-03-18 01:52:26.104 -07 000000447 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms. 17-03-18 01:52:26.104 -07 000000447 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:26.104 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:26.104 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms. 17-03-18 01:52:26.104 -07 000000447 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:26.114 -07 000000447 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:52:26.244 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:26.244 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:26.244 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:26.244 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:26.244 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start. 17-03-18 01:52:26.244 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:26.244 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:26.244 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:26.244 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:26.244 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start. 17-03-18 01:52:26.433 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:26.433 -07 000000629 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:26.433 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28364 150' command took 4 ms to send, 1302 ms to get response, and 1315 ms overall 17-03-18 01:52:26.433 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:52:26.433 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 16 at Y-position 71.5185546875, Z-Position -0.129041007887505. ------ 17-03-18 01:52:26.443 -07 000000501 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:26.443 -07 000000629 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.13540 mm 17-03-18 01:52:26.443 -07 000000629 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:26.443 -07 000000424 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:26.443 -07 000000444 INF: Z Motor: Entering MoveAbsStepped (DAC = 29578, sync = True, waitForSettling = False) 17-03-18 01:52:26.443 -07 000000444 INF: Z Motor: Moving to -0.135399 mm, started at -0.129041 mm, distance = -6.36 um 17-03-18 01:52:26.443 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True) 17-03-18 01:52:26.443 -07 000000591 INF: Y Motor: Moving to 72.3626 mm, started at 71.5186 mm, delta = 0.8441 mm 17-03-18 01:52:26.453 -07 000000501 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:26.453 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:26.453 -07 000000447 INF: FPGA: Recv YRDPOS 146470 17-03-18 01:52:26.463 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 15 ms overall 17-03-18 01:52:26.463 -07 000000591 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:26.463 -07 000000591 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:26.463 -07 000000591 INF: Y Motor: Moving 1350 steps-30 17-03-18 01:52:26.463 -07 000000444 INF: FPGA: Xmit ZDACW 29578\n [Z Motor] 17-03-18 01:52:26.463 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:52:26.473 -07 000000501 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:52:26.473 -07 000000444 INF: FPGA: 'ZDACW 29578' command took 1 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 01:52:26.483 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:26.493 -07 000000444 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:26.493 -07 000000447 INF: FPGA: Recv ZDACR 29578 17-03-18 01:52:26.503 -07 000000444 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:26.503 -07 000000444 INF: Z Motor: MoveAbsStepped took 56 ms (did NOT wait for settling yet)) 17-03-18 01:52:26.633 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 392 ms. 17-03-18 01:52:26.633 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:52:26.633 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:26.633 -07 000000487 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 396 ms. 17-03-18 01:52:26.633 -07 000000487 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 01:52:26.633 -07 000000487 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:26.643 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:26.643 -07 000000487 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms. 17-03-18 01:52:26.643 -07 000000487 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms. 17-03-18 01:52:26.643 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:52:26.673 -07 000000444 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:52:26.673 -07 000000501 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 01:52:26.853 -07 000000618 INF: FPGA: Recv YMVTILE 17-03-18 01:52:26.853 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall 17-03-18 01:52:26.893 -07 000000447 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:26.893 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:26.903 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:26.903 -07 000000501 INF: FPGA: Recv YRDPOS 148171 17-03-18 01:52:26.913 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:26.913 -07 000000591 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:26.913 -07 000000591 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm) 17-03-18 01:52:26.913 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.126 mm/sec 17-03-18 01:52:27.861 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:27.861 -07 000000430 INF: FPGA: Recv YRDPOS 148171 17-03-18 01:52:27.871 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:27.871 -07 000000591 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:27.891 -07 000000591 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:27.891 -07 000000591 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:52:27.891 -07 000000591 INF: Y Motor: Moved to 72.3491 after 1454 ms (table move) 17-03-18 01:52:27.901 -07 000000629 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135399 mm (DAC = 29578) 17-03-18 01:52:27.901 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.901 -07 000000447 INF: FPGA: Recv ZSGSRD 30367 17-03-18 01:52:27.911 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:27.911 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.911 -07 000000618 INF: FPGA: Recv ZSGSRD 30365 17-03-18 01:52:27.921 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.921 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.921 -07 000000618 INF: FPGA: Recv ZSGSRD 30369 17-03-18 01:52:27.931 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.931 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.931 -07 000000618 INF: FPGA: Recv ZSGSRD 30370 17-03-18 01:52:27.941 -07 000000629 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.941 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.941 -07 000000618 INF: FPGA: Recv ZSGSRD 30364 17-03-18 01:52:27.951 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.951 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.951 -07 000000618 INF: FPGA: Recv ZSGSRD 30367 17-03-18 01:52:27.961 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.961 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.961 -07 000000618 INF: FPGA: Recv ZSGSRD 30362 17-03-18 01:52:27.971 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.971 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.971 -07 000000592 INF: FPGA: Recv ZSGSRD 30367 17-03-18 01:52:27.981 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.981 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.981 -07 000000592 INF: FPGA: Recv ZSGSRD 30363 17-03-18 01:52:27.991 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:27.991 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:27.991 -07 000000592 INF: FPGA: Recv ZSGSRD 30366 17-03-18 01:52:28.001 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:28.001 -07 000000629 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:28.001 -07 000000592 INF: FPGA: Recv ZPIEZORD 26302 17-03-18 01:52:28.011 -07 000000629 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:28.011 -07 000000629 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.1 V, since DAC is at 4.513 V. Piezo Error = -8.9 V. 17-03-18 01:52:28.011 -07 000000629 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.4 um, Read 10 ADC samples: Avg = 30366 (-134.6 uncal um), Error = 0.8 uncal um, Median = 30366 (-134.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30362 (-134.6 uncal um), Max = 30370 (-134.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:52:28.011 -07 000000629 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30366, posNoise = 4, negNoise = 4 17-03-18 01:52:28.011 -07 000000629 INF: Z Motor: After move to -0.135399, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:28.011 -07 000000629 INF: Z Motor: Settle wait time = 1458 ms, measure time = 108 ms (allowed 150 ms), total time = 1566 ms 17-03-18 01:52:28.011 -07 000000629 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:28.060 -07 000000629 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1619 ms 17-03-18 01:52:28.060 -07 000000629 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:28.060 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:28.060 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:28.060 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:28.060 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:28.070 -07 000000592 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:52:28.070 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:28.070 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:28.070 -07 000000592 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:52:28.070 -07 000000592 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:28.070 -07 000000592 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:52:28.080 -07 000000592 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms. 17-03-18 01:52:28.080 -07 000000592 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 10 ms. 17-03-18 01:52:28.080 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:52:28.130 -07 000000592 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:52:28.420 -07 000000629 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:52:28.430 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:52:28.430 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:52:28.430 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) start. 17-03-18 01:52:28.460 -07 000000629 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:52:28.470 -07 000000629 INF: FPGA: Recv CAMSNAP 17-03-18 01:52:28.470 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall 17-03-18 01:52:28.540 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 594000200, 0x0, 559484976) end. Duration was 116 ms. 17-03-18 01:52:28.540 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:28.540 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-18 01:52:28.550 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 119 ms. 17-03-18 01:52:28.569 -07 000000629 INF: Autofocus start 17-03-18 01:52:28.569 -07 000000629 INF: MeasureProfile start 17-03-18 01:52:28.569 -07 000000592 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:28.579 -07 000000629 INF: MeasureProfile done 17-03-18 01:52:28.579 -07 000000629 INF: X=0 Z correction [um]=-0.02394831 17-03-18 01:52:28.579 -07 000000629 INF: Autofocus finished 17-03-18 01:52:28.589 -07 000000629 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:28.589 -07 000000592 INF: FPGA: 'FOCMRRCUR 80' command took 3 ms to send, 11 ms to get response, and 17 ms overall 17-03-18 01:52:28.589 -07 000000592 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:52:28.789 -07 000000629 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:52:28.789 -07 000000592 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 194 ms to get response, and 202 ms overall 17-03-18 01:52:28.789 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.135400977907848. ---------- 17-03-18 01:52:28.789 -07 000000610 INF: Cycle 92 Tile 16 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:28.799 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28085, sync = True, waitForSettling = True) 17-03-18 01:52:28.799 -07 000000610 INF: Z Motor: Moving to -0.128565 mm, started at -0.135401 mm, distance = 6.84 um 17-03-18 01:52:28.799 -07 000000610 INF: FPGA: Xmit ZDACW 28085\n [Z Motor] 17-03-18 01:52:28.799 -07 000000629 INF: FPGA: Recv ZDACW 17-03-18 01:52:28.809 -07 000000610 INF: FPGA: 'ZDACW 28085' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:52:28.809 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:28.809 -07 000000629 INF: FPGA: Recv ZDACR 28085 17-03-18 01:52:28.819 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:28.819 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:28.969 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:28.969 -07 000000629 INF: FPGA: Recv ZSGSRD 29301 17-03-18 01:52:28.979 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:28.979 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:28.979 -07 000000629 INF: FPGA: Recv ZSGSRD 29303 17-03-18 01:52:28.989 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:28.999 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:28.999 -07 000000592 INF: FPGA: Recv ZSGSRD 29305 17-03-18 01:52:29.009 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:29.009 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.009 -07 000000592 INF: FPGA: Recv ZSGSRD 29301 17-03-18 01:52:29.019 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:29.029 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.029 -07 000000629 INF: FPGA: Recv ZSGSRD 29302 17-03-18 01:52:29.039 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:29.059 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.059 -07 000000629 INF: FPGA: Recv ZSGSRD 29296 17-03-18 01:52:29.069 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:29.079 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.079 -07 000000626 INF: FPGA: Recv ZSGSRD 29304 17-03-18 01:52:29.089 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:29.089 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.089 -07 000000592 INF: FPGA: Recv ZSGSRD 29305 17-03-18 01:52:29.098 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:29.108 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.108 -07 000000629 INF: FPGA: Recv ZSGSRD 29303 17-03-18 01:52:29.118 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:29.118 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:29.118 -07 000000626 INF: FPGA: Recv ZSGSRD 29299 17-03-18 01:52:29.128 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:29.128 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:29.128 -07 000000592 INF: FPGA: Recv ZPIEZORD 24838 17-03-18 01:52:29.138 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:29.138 -07 000000610 INF: Z Motor: Piezo is near 33.1 V (nominally 0 to 100 V), expect near 42.9 V, since DAC is at 4.285 V. Piezo Error = -9.8 V. 17-03-18 01:52:29.138 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.6 um, Read 10 ADC samples: Avg = 29302 (-127.8 uncal um), Error = 0.8 uncal um, Median = 29302 (-127.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29296 (-127.8 uncal um), Max = 29305 (-127.8 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:52:29.138 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29302, posNoise = 3, negNoise = 6 17-03-18 01:52:29.138 -07 000000610 INF: Z Motor: After move to -0.128565, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:29.138 -07 000000610 INF: Z Motor: MoveAbsStepped took 336 ms) 17-03-18 01:52:29.138 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:29.138 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:29.138 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:29.138 -07 000000592 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:29.138 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:29.138 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:29.138 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:29.138 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:29.138 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:29.138 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:29.138 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:29.138 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:29.148 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms. 17-03-18 01:52:29.148 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:29.148 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:29.148 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:29.158 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms. 17-03-18 01:52:29.158 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms. 17-03-18 01:52:29.158 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:52:29.158 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms. 17-03-18 01:52:29.158 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28262 150\n [Camera] 17-03-18 01:52:29.358 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.994908, 17-03-18 01:52:29.368 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:29.757 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:29.757 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:29.757 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:29.757 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:29.757 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start. 17-03-18 01:52:29.757 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:29.757 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:29.757 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:29.757 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:29.757 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start. 17-03-18 01:52:29.947 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28262 777 17-03-18 01:52:30.097 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:30.157 -07 000000480 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 399 ms. 17-03-18 01:52:30.157 -07 000000480 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 01:52:30.157 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:30.157 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 399 ms. 17-03-18 01:52:30.157 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 01:52:30.157 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:30.157 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:30.157 -07 000000480 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 01:52:30.166 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms. 17-03-18 01:52:30.176 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-18 01:52:30.286 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:30.286 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:30.286 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:30.286 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:30.286 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start. 17-03-18 01:52:30.296 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:30.296 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:30.296 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:30.296 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:30.296 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start. 17-03-18 01:52:30.476 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:52:30.476 -07 000000561 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:30.476 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28262 150' command took 2 ms to send, 1307 ms to get response, and 1318 ms overall 17-03-18 01:52:30.476 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:52:30.476 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.34912109375, Z-Position -0.128565616189015. ------ 17-03-18 01:52:30.486 -07 000000626 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:30.486 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13514 mm 17-03-18 01:52:30.486 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:30.486 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True) 17-03-18 01:52:30.486 -07 000000467 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm 17-03-18 01:52:30.486 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 29522, sync = True, waitForSettling = False) 17-03-18 01:52:30.486 -07 000000579 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:30.486 -07 000000561 INF: Z Motor: Moving to -0.135143 mm, started at -0.128566 mm, distance = -6.58 um 17-03-18 01:52:30.496 -07 000000626 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:30.496 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:30.496 -07 000000579 INF: FPGA: Recv YRDPOS 148172 17-03-18 01:52:30.506 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall 17-03-18 01:52:30.506 -07 000000561 INF: FPGA: Xmit ZDACW 29522\n [Z Motor] 17-03-18 01:52:30.506 -07 000000467 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:30.506 -07 000000592 INF: FPGA: Recv ZDACW 17-03-18 01:52:30.506 -07 000000467 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:30.506 -07 000000467 INF: Y Motor: Moving 1349 steps-28 17-03-18 01:52:30.516 -07 000000626 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:52:30.516 -07 000000561 INF: FPGA: 'ZDACW 29522' command took 0 ms to send, 0 ms to get response, and 20 ms overall 17-03-18 01:52:30.526 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:30.536 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:30.536 -07 000000579 INF: FPGA: Recv ZDACR 29522 17-03-18 01:52:30.546 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:30.546 -07 000000561 INF: Z Motor: MoveAbsStepped took 51 ms (did NOT wait for settling yet)) 17-03-18 01:52:30.686 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 401 ms. 17-03-18 01:52:30.686 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:52:30.686 -07 000000606 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:30.696 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 400 ms. 17-03-18 01:52:30.696 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 400 ms. 17-03-18 01:52:30.696 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:30.696 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms. 17-03-18 01:52:30.696 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms. 17-03-18 01:52:30.696 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:30.705 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms. 17-03-18 01:52:30.715 -07 000000606 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:52:30.715 -07 000000626 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall 17-03-18 01:52:30.895 -07 000000480 INF: FPGA: Recv YMVTILE 17-03-18 01:52:30.895 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall 17-03-18 01:52:30.945 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:31.793 -07 000000626 INF: FPGA: Recv YRDPOS 149863 17-03-18 01:52:31.793 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 840 ms to get response, and 847 ms overall 17-03-18 01:52:31.793 -07 000000467 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:31.793 -07 000000467 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm) 17-03-18 01:52:31.793 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 395 ms, distance = 0.843 mm, average velocity = 2.135 mm/sec 17-03-18 01:52:31.883 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:31.883 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:32.742 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:32.742 -07 000000592 INF: FPGA: Recv YRDPOS 149864 17-03-18 01:52:32.752 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:32.752 -07 000000467 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:32.772 -07 000000467 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:32.772 -07 000000467 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm) 17-03-18 01:52:32.772 -07 000000467 INF: Y Motor: Moved to 73.1758 after 2293 ms (table move) 17-03-18 01:52:32.782 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.135143 mm (DAC = 29522) 17-03-18 01:52:32.782 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.782 -07 000000592 INF: FPGA: Recv ZSGSRD 30331 17-03-18 01:52:32.792 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:32.792 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.792 -07 000000467 INF: FPGA: Recv ZSGSRD 30324 17-03-18 01:52:32.802 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.802 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.802 -07 000000561 INF: FPGA: Recv ZSGSRD 30325 17-03-18 01:52:32.812 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.812 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.812 -07 000000467 INF: FPGA: Recv ZSGSRD 30323 17-03-18 01:52:32.822 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.822 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.822 -07 000000579 INF: FPGA: Recv ZSGSRD 30326 17-03-18 01:52:32.832 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.832 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.832 -07 000000592 INF: FPGA: Recv ZSGSRD 30331 17-03-18 01:52:32.841 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.841 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.841 -07 000000561 INF: FPGA: Recv ZSGSRD 30326 17-03-18 01:52:32.851 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.851 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.851 -07 000000467 INF: FPGA: Recv ZSGSRD 30325 17-03-18 01:52:32.861 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.861 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.861 -07 000000629 INF: FPGA: Recv ZSGSRD 30325 17-03-18 01:52:32.871 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.871 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:32.871 -07 000000512 INF: FPGA: Recv ZSGSRD 30330 17-03-18 01:52:32.881 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.881 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:32.881 -07 000000561 INF: FPGA: Recv ZPIEZORD 26224 17-03-18 01:52:32.891 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:32.891 -07 000000501 INF: Z Motor: Piezo is near 36.0 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.505 V. Piezo Error = -9.0 V. 17-03-18 01:52:32.891 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.1 um, Read 10 ADC samples: Avg = 30327 (-134.4 uncal um), Error = 0.8 uncal um, Median = 30326 (-134.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 30323 (-134.3 uncal um), Max = 30331 (-134.4 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:52:32.891 -07 000000501 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30327, posNoise = 4, negNoise = 4 17-03-18 01:52:32.891 -07 000000501 INF: Z Motor: After move to -0.135143, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:32.891 -07 000000501 INF: Z Motor: Settle wait time = 2293 ms, measure time = 108 ms (allowed 150 ms), total time = 2401 ms 17-03-18 01:52:32.891 -07 000000501 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:32.941 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 2456 ms 17-03-18 01:52:32.941 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:32.941 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:32.941 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:32.941 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:32.941 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:52:32.941 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:32.941 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:32.941 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:32.941 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:52:32.951 -07 000000467 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:32.951 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:52:32.961 -07 000000467 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms. 17-03-18 01:52:32.961 -07 000000467 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms. 17-03-18 01:52:32.961 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:52:33.011 -07 000000592 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:52:33.311 -07 000000629 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:52:33.311 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:52:33.311 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:52:33.311 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) start. 17-03-18 01:52:33.351 -07 000000626 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:52:33.351 -07 000000579 INF: FPGA: Recv CAMSNAP 17-03-18 01:52:33.351 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall 17-03-18 01:52:33.440 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1512312592, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 01:52:33.440 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:33.440 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms. 17-03-18 01:52:33.440 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 01:52:33.450 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:33.450 -07 000000626 INF: Autofocus start 17-03-18 01:52:33.450 -07 000000626 INF: MeasureProfile start 17-03-18 01:52:33.450 -07 000000592 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:33.460 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:33.460 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:52:33.460 -07 000000626 INF: MeasureProfile done 17-03-18 01:52:33.460 -07 000000626 INF: X=0 Z correction [um]=-0.02394831 17-03-18 01:52:33.460 -07 000000626 INF: Autofocus finished 17-03-18 01:52:33.660 -07 000000579 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:52:33.660 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:52:33.660 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.13515043363432. ---------- 17-03-18 01:52:33.660 -07 000000610 INF: Cycle 92 Tile 17 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:33.670 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28029, sync = True, waitForSettling = True) 17-03-18 01:52:33.670 -07 000000610 INF: Z Motor: Moving to -0.128309 mm, started at -0.135150 mm, distance = 6.84 um 17-03-18 01:52:33.670 -07 000000610 INF: FPGA: Xmit ZDACW 28029\n [Z Motor] 17-03-18 01:52:33.670 -07 000000561 INF: FPGA: Recv ZDACW 17-03-18 01:52:33.680 -07 000000610 INF: FPGA: 'ZDACW 28029' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.680 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:33.680 -07 000000592 INF: FPGA: Recv ZDACR 28029 17-03-18 01:52:33.690 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.690 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:33.840 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.840 -07 000000501 INF: FPGA: Recv ZSGSRD 29264 17-03-18 01:52:33.850 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:33.850 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.850 -07 000000592 INF: FPGA: Recv ZSGSRD 29264 17-03-18 01:52:33.860 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.860 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.860 -07 000000629 INF: FPGA: Recv ZSGSRD 29265 17-03-18 01:52:33.870 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.870 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.870 -07 000000579 INF: FPGA: Recv ZSGSRD 29263 17-03-18 01:52:33.880 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.880 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.880 -07 000000629 INF: FPGA: Recv ZSGSRD 29265 17-03-18 01:52:33.890 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:33.890 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.890 -07 000000579 INF: FPGA: Recv ZSGSRD 29270 17-03-18 01:52:33.900 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.900 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.900 -07 000000629 INF: FPGA: Recv ZSGSRD 29266 17-03-18 01:52:33.909 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.909 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.909 -07 000000561 INF: FPGA: Recv ZSGSRD 29259 17-03-18 01:52:33.919 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.919 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.919 -07 000000501 INF: FPGA: Recv ZSGSRD 29265 17-03-18 01:52:33.929 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.929 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:33.929 -07 000000592 INF: FPGA: Recv ZSGSRD 29266 17-03-18 01:52:33.939 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.939 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:33.939 -07 000000626 INF: FPGA: Recv ZPIEZORD 24817 17-03-18 01:52:33.949 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:33.949 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.277 V. Piezo Error = -9.8 V. 17-03-18 01:52:33.949 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.3 um, Read 10 ADC samples: Avg = 29265 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29265 (-127.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29259 (-127.5 uncal um), Max = 29270 (-127.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um) 17-03-18 01:52:33.949 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29265, posNoise = 5, negNoise = 6 17-03-18 01:52:33.949 -07 000000610 INF: Z Motor: After move to -0.128309, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:33.949 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms) 17-03-18 01:52:33.949 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:33.949 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:33.949 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:33.949 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:33.949 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:33.949 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:33.949 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:33.949 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:33.949 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms. 17-03-18 01:52:33.949 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:33.949 -07 000000447 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:33.949 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:33.949 -07 000000447 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:33.959 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:33.959 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:33.959 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:33.969 -07 000000447 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms. 17-03-18 01:52:33.969 -07 000000447 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:52:33.969 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms. 17-03-18 01:52:33.969 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms. 17-03-18 01:52:33.979 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28206 150\n [Camera] 17-03-18 01:52:34.169 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:34.568 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:34.568 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:34.568 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:34.568 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:34.568 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start. 17-03-18 01:52:34.568 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:34.568 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:34.568 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:34.568 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:34.568 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start. 17-03-18 01:52:34.728 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 3.996267, 17-03-18 01:52:34.758 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28206 777 17-03-18 01:52:34.908 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:34.958 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 385 ms. 17-03-18 01:52:34.958 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms. 17-03-18 01:52:34.958 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:34.958 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:34.958 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 392 ms. 17-03-18 01:52:34.958 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 392 ms. 17-03-18 01:52:34.958 -07 000000561 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:34.958 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:34.958 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 396 ms. 17-03-18 01:52:34.968 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms. 17-03-18 01:52:35.097 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:35.097 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:35.097 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:35.237 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:35.237 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:35.237 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:35.237 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start. 17-03-18 01:52:35.237 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:35.247 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:35.247 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start. 17-03-18 01:52:35.287 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:52:35.287 -07 000000561 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:35.287 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28206 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:52:35.287 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:52:35.287 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 18 at Y-position 73.17578125, Z-Position -0.128327920339769. ------ 17-03-18 01:52:35.297 -07 000000447 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:35.297 -07 000000444 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.13465 mm 17-03-18 01:52:35.297 -07 000000444 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:35.297 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True) 17-03-18 01:52:35.297 -07 000000629 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm 17-03-18 01:52:35.297 -07 000000592 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:35.297 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 29414, sync = True, waitForSettling = False) 17-03-18 01:52:35.297 -07 000000626 INF: Z Motor: Moving to -0.134649 mm, started at -0.128328 mm, distance = -6.32 um 17-03-18 01:52:35.307 -07 000000626 INF: FPGA: Xmit ZDACW 29414\n [Z Motor] 17-03-18 01:52:35.307 -07 000000447 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall 17-03-18 01:52:35.307 -07 000000487 INF: FPGA: Recv ZDACW 17-03-18 01:52:35.317 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:35.317 -07 000000626 INF: FPGA: 'ZDACW 29414' command took 0 ms to send, 0 ms to get response, and 13 ms overall 17-03-18 01:52:35.317 -07 000000561 INF: FPGA: Recv YRDPOS 149864 17-03-18 01:52:35.327 -07 000000447 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:52:35.327 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 24 ms overall 17-03-18 01:52:35.327 -07 000000629 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:35.327 -07 000000629 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:35.327 -07 000000629 INF: Y Motor: Moving 1355 steps-35 17-03-18 01:52:35.337 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:35.337 -07 000000591 INF: FPGA: Recv ZDACR 29414 17-03-18 01:52:35.347 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:35.347 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall 17-03-18 01:52:35.347 -07 000000626 INF: Z Motor: MoveAbsStepped took 44 ms (did NOT wait for settling yet)) 17-03-18 01:52:35.526 -07 000000579 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:52:35.526 -07 000000447 INF: FPGA: 'FOCMRRFOC' command took 3 ms to send, 195 ms to get response, and 225 ms overall 17-03-18 01:52:35.636 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 392 ms. 17-03-18 01:52:35.636 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms. 17-03-18 01:52:35.636 -07 000000501 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:35.636 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 399 ms. 17-03-18 01:52:35.636 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms. 17-03-18 01:52:35.636 -07 000000512 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:35.646 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:35.646 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:35.646 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 547 ms. 17-03-18 01:52:35.646 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms. 17-03-18 01:52:35.716 -07 000000591 INF: FPGA: Recv YMVTILE 17-03-18 01:52:35.716 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 394 ms overall 17-03-18 01:52:35.756 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:35.756 -07 000000512 INF: FPGA: Recv YRDPOS 151568 17-03-18 01:52:35.766 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall 17-03-18 01:52:35.766 -07 000000629 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:35.766 -07 000000629 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm) 17-03-18 01:52:35.766 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.847 mm, average velocity = 2.149 mm/sec 17-03-18 01:52:36.714 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:36.714 -07 000000512 INF: FPGA: Recv YRDPOS 151568 17-03-18 01:52:36.724 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:36.724 -07 000000629 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:36.744 -07 000000629 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:36.744 -07 000000629 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:52:36.744 -07 000000629 INF: Y Motor: Moved to 74.0078 after 1446 ms (table move) 17-03-18 01:52:36.744 -07 000000444 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134649 mm (DAC = 29414) 17-03-18 01:52:36.744 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.744 -07 000000487 INF: FPGA: Recv ZSGSRD 30252 17-03-18 01:52:36.754 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:52:36.754 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.754 -07 000000626 INF: FPGA: Recv ZSGSRD 30255 17-03-18 01:52:36.764 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.764 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.764 -07 000000501 INF: FPGA: Recv ZSGSRD 30255 17-03-18 01:52:36.774 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.774 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.774 -07 000000447 INF: FPGA: Recv ZSGSRD 30251 17-03-18 01:52:36.784 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.784 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.784 -07 000000447 INF: FPGA: Recv ZSGSRD 30251 17-03-18 01:52:36.794 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.794 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.794 -07 000000447 INF: FPGA: Recv ZSGSRD 30244 17-03-18 01:52:36.804 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.804 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.804 -07 000000591 INF: FPGA: Recv ZSGSRD 30251 17-03-18 01:52:36.814 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.814 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.814 -07 000000447 INF: FPGA: Recv ZSGSRD 30247 17-03-18 01:52:36.824 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.824 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.824 -07 000000576 INF: FPGA: Recv ZSGSRD 30251 17-03-18 01:52:36.834 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.834 -07 000000444 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:36.834 -07 000000591 INF: FPGA: Recv ZSGSRD 30259 17-03-18 01:52:36.844 -07 000000444 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.844 -07 000000444 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:36.844 -07 000000591 INF: FPGA: Recv ZPIEZORD 26157 17-03-18 01:52:36.854 -07 000000444 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:36.854 -07 000000444 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 44.9 V, since DAC is at 4.488 V. Piezo Error = -9.0 V. 17-03-18 01:52:36.854 -07 000000444 INF: Z Motor: ReadAdcAverage: Commanded Z = -134.6 um, Read 10 ADC samples: Avg = 30252 (-133.9 uncal um), Error = 0.8 uncal um, Median = 30251 (-133.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 30244 (-133.8 uncal um), Max = 30259 (-133.9 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um) 17-03-18 01:52:36.854 -07 000000444 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30252, posNoise = 7, negNoise = 8 17-03-18 01:52:36.854 -07 000000444 INF: Z Motor: After move to -0.134649, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:36.854 -07 000000444 INF: Z Motor: Settle wait time = 1450 ms, measure time = 104 ms (allowed 150 ms), total time = 1554 ms 17-03-18 01:52:36.854 -07 000000444 INF: Z Motor: Waiting extra 46 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:36.874 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:36.874 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:36.904 -07 000000444 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1607 ms 17-03-18 01:52:36.904 -07 000000444 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:36.904 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:36.904 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:36.904 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:36.904 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:36.904 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:52:36.904 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:36.904 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms. 17-03-18 01:52:36.904 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:52:36.914 -07 000000444 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:36.914 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:52:36.914 -07 000000444 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 7 ms. 17-03-18 01:52:36.914 -07 000000444 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms. 17-03-18 01:52:36.924 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:52:36.974 -07 000000626 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:52:37.273 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:52:37.273 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:52:37.273 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:52:37.273 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start. 17-03-18 01:52:37.313 -07 000000592 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:52:37.313 -07 000000576 INF: FPGA: Recv CAMSNAP 17-03-18 01:52:37.313 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 385 ms overall 17-03-18 01:52:37.403 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 127 ms. 17-03-18 01:52:37.403 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:37.403 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:52:37.403 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms. 17-03-18 01:52:37.413 -07 000000592 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:37.413 -07 000000626 INF: Autofocus start 17-03-18 01:52:37.413 -07 000000626 INF: MeasureProfile start 17-03-18 01:52:37.413 -07 000000444 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:37.423 -07 000000592 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:37.423 -07 000000592 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:52:37.423 -07 000000626 INF: MeasureProfile done 17-03-18 01:52:37.423 -07 000000626 INF: X=16 Z correction [um]=0.0530179 17-03-18 01:52:37.423 -07 000000626 INF: Autofocus finished 17-03-18 01:52:37.623 -07 000000626 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:52:37.623 -07 000000592 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:52:37.623 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.134668617723687. ---------- 17-03-18 01:52:37.633 -07 000000610 INF: Cycle 92 Tile 18 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:37.633 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27938, sync = True, waitForSettling = True) 17-03-18 01:52:37.633 -07 000000610 INF: Z Motor: Moving to -0.127892 mm, started at -0.134669 mm, distance = 6.78 um 17-03-18 01:52:37.633 -07 000000610 INF: FPGA: Xmit ZDACW 27938\n [Z Motor] 17-03-18 01:52:37.633 -07 000000576 INF: FPGA: Recv ZDACW 17-03-18 01:52:37.642 -07 000000610 INF: FPGA: 'ZDACW 27938' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:37.642 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:37.642 -07 000000629 INF: FPGA: Recv ZDACR 27938 17-03-18 01:52:37.652 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.652 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:37.802 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.802 -07 000000626 INF: FPGA: Recv ZSGSRD 29201 17-03-18 01:52:37.812 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:37.812 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.812 -07 000000592 INF: FPGA: Recv ZSGSRD 29203 17-03-18 01:52:37.822 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.822 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.822 -07 000000629 INF: FPGA: Recv ZSGSRD 29201 17-03-18 01:52:37.832 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.832 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.832 -07 000000576 INF: FPGA: Recv ZSGSRD 29198 17-03-18 01:52:37.842 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.842 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.842 -07 000000447 INF: FPGA: Recv ZSGSRD 29198 17-03-18 01:52:37.852 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.852 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.852 -07 000000592 INF: FPGA: Recv ZSGSRD 29203 17-03-18 01:52:37.862 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.862 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.862 -07 000000447 INF: FPGA: Recv ZSGSRD 29200 17-03-18 01:52:37.872 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.872 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.872 -07 000000444 INF: FPGA: Recv ZSGSRD 29193 17-03-18 01:52:37.882 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.882 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.882 -07 000000576 INF: FPGA: Recv ZSGSRD 29201 17-03-18 01:52:37.892 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.892 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:37.892 -07 000000591 INF: FPGA: Recv ZSGSRD 29199 17-03-18 01:52:37.902 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.902 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:37.902 -07 000000629 INF: FPGA: Recv ZPIEZORD 24724 17-03-18 01:52:37.912 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:37.912 -07 000000610 INF: Z Motor: Piezo is near 32.8 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.263 V. Piezo Error = -9.8 V. 17-03-18 01:52:37.912 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.9 um, Read 10 ADC samples: Avg = 29200 (-127.1 uncal um), Error = 0.8 uncal um, Median = 29200 (-127.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 29193 (-127.1 uncal um), Max = 29203 (-127.2 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um) 17-03-18 01:52:37.912 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29200, posNoise = 3, negNoise = 7 17-03-18 01:52:37.912 -07 000000610 INF: Z Motor: After move to -0.127892, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:37.912 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 01:52:37.912 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:37.912 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:37.912 -07 000000447 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:37.912 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:37.912 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:37.912 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:37.912 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:37.912 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:37.912 -07 000000592 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 01:52:37.912 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:37.912 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:37.912 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:37.922 -07 000000592 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:37.922 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:37.922 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms. 17-03-18 01:52:37.922 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:37.932 -07 000000592 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms. 17-03-18 01:52:37.932 -07 000000592 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:52:37.932 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms. 17-03-18 01:52:37.932 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms. 17-03-18 01:52:37.932 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 28115 150\n [Camera] 17-03-18 01:52:38.132 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:38.531 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:38.531 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:38.531 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:38.531 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:38.531 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:38.531 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:38.531 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:38.531 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start. 17-03-18 01:52:38.531 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:38.531 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) start. 17-03-18 01:52:38.720 -07 000000447 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28115 777 17-03-18 01:52:38.870 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:38.910 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 377 ms. 17-03-18 01:52:38.910 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms. 17-03-18 01:52:38.910 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:38.910 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:38.920 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1130172064, 0x0, 391868352) end. Duration was 387 ms. 17-03-18 01:52:38.920 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms. 17-03-18 01:52:38.920 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms. 17-03-18 01:52:38.920 -07 000000626 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:38.920 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms. 17-03-18 01:52:38.920 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms. 17-03-18 01:52:39.060 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:39.060 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:39.060 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:39.170 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:39.170 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:39.170 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:39.180 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:39.180 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:52:39.180 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:39.180 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:52:39.249 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1307 17-03-18 01:52:39.249 -07 000000591 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:39.249 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 28115 150' command took 2 ms to send, 1304 ms to get response, and 1314 ms overall 17-03-18 01:52:39.249 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503 17-03-18 01:52:39.249 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 19 at Y-position 74.0078125, Z-Position -0.127910346550555. ------ 17-03-18 01:52:39.249 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:39.249 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.13385 mm 17-03-18 01:52:39.249 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move 17-03-18 01:52:39.259 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True) 17-03-18 01:52:39.259 -07 000000444 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm 17-03-18 01:52:39.259 -07 000000447 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:39.259 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 2 ms to get response, and 3 ms overall 17-03-18 01:52:39.259 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:39.259 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 29239, sync = True, waitForSettling = False) 17-03-18 01:52:39.259 -07 000000591 INF: Z Motor: Moving to -0.133848 mm, started at -0.127910 mm, distance = -5.94 um 17-03-18 01:52:39.259 -07 000000447 INF: FPGA: Recv YRDPOS 151568 17-03-18 01:52:39.269 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:39.269 -07 000000444 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:39.269 -07 000000444 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True 17-03-18 01:52:39.269 -07 000000444 INF: Y Motor: Moving 1352 steps-30 17-03-18 01:52:39.269 -07 000000629 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror] 17-03-18 01:52:39.279 -07 000000591 INF: FPGA: Xmit ZDACW 29239\n [Z Motor] 17-03-18 01:52:39.279 -07 000000447 INF: FPGA: Recv ZDACW 17-03-18 01:52:39.289 -07 000000591 INF: FPGA: 'ZDACW 29239' command took 0 ms to send, 0 ms to get response, and 26 ms overall 17-03-18 01:52:39.289 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor] 17-03-18 01:52:39.299 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:39.299 -07 000000424 INF: FPGA: Recv ZDACR 29239 17-03-18 01:52:39.309 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall 17-03-18 01:52:39.309 -07 000000591 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet)) 17-03-18 01:52:39.469 -07 000000606 INF: FPGA: Recv FOCMRRFOC 17-03-18 01:52:39.469 -07 000000629 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 193 ms to get response, and 210 ms overall 17-03-18 01:52:39.579 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 401 ms. 17-03-18 01:52:39.579 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 401 ms. 17-03-18 01:52:39.579 -07 000000576 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:39.579 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 401 ms. 17-03-18 01:52:39.579 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms. 17-03-18 01:52:39.579 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:39.579 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:39.579 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 525 ms. 17-03-18 01:52:39.579 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:39.589 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 420 ms. 17-03-18 01:52:39.669 -07 000000447 INF: FPGA: Recv YMVTILE 17-03-18 01:52:39.669 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 3 ms to send, 371 ms to get response, and 400 ms overall 17-03-18 01:52:39.689 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:39.699 -07 000000606 INF: FPGA: Recv YRDPOS 153254 17-03-18 01:52:39.699 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall 17-03-18 01:52:39.699 -07 000000444 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:39.699 -07 000000444 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm) 17-03-18 01:52:39.699 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 401 ms, distance = 0.845 mm, average velocity = 2.107 mm/sec 17-03-18 01:52:40.098 -07 000000480 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.004458, 17-03-18 01:52:40.647 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor] 17-03-18 01:52:40.647 -07 000000576 INF: FPGA: Recv YRDPOS 153254 17-03-18 01:52:40.657 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.657 -07 000000444 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um) 17-03-18 01:52:40.667 -07 000000444 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm 17-03-18 01:52:40.667 -07 000000444 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm) 17-03-18 01:52:40.667 -07 000000444 INF: Y Motor: Moved to 74.8311 after 1416 ms (table move) 17-03-18 01:52:40.677 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133848 mm (DAC = 29239) 17-03-18 01:52:40.677 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.677 -07 000000444 INF: FPGA: Recv ZSGSRD 30125 17-03-18 01:52:40.687 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall 17-03-18 01:52:40.687 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.687 -07 000000430 INF: FPGA: Recv ZSGSRD 30131 17-03-18 01:52:40.697 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.697 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.697 -07 000000444 INF: FPGA: Recv ZSGSRD 30126 17-03-18 01:52:40.707 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.707 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.707 -07 000000591 INF: FPGA: Recv ZSGSRD 30127 17-03-18 01:52:40.717 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.717 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.717 -07 000000591 INF: FPGA: Recv ZSGSRD 30127 17-03-18 01:52:40.727 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.727 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.727 -07 000000444 INF: FPGA: Recv ZSGSRD 30122 17-03-18 01:52:40.737 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.737 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.737 -07 000000444 INF: FPGA: Recv ZSGSRD 30117 17-03-18 01:52:40.747 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.747 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.747 -07 000000618 INF: FPGA: Recv ZSGSRD 30129 17-03-18 01:52:40.757 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.757 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.757 -07 000000447 INF: FPGA: Recv ZSGSRD 30129 17-03-18 01:52:40.767 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.767 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:40.767 -07 000000444 INF: FPGA: Recv ZSGSRD 30130 17-03-18 01:52:40.777 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.777 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:40.777 -07 000000444 INF: FPGA: Recv ZPIEZORD 25970 17-03-18 01:52:40.787 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:40.787 -07 000000626 INF: Z Motor: Piezo is near 35.5 V (nominally 0 to 100 V), expect near 44.6 V, since DAC is at 4.462 V. Piezo Error = -9.1 V. 17-03-18 01:52:40.787 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.8 um, Read 10 ADC samples: Avg = 30126 (-133.1 uncal um), Error = 0.8 uncal um, Median = 30127 (-133.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30117 (-133.0 uncal um), Max = 30131 (-133.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um) 17-03-18 01:52:40.787 -07 000000626 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30126, posNoise = 5, negNoise = 9 17-03-18 01:52:40.787 -07 000000626 INF: Z Motor: After move to -0.133848, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:40.787 -07 000000626 INF: Z Motor: Settle wait time = 1419 ms, measure time = 108 ms (allowed 150 ms), total time = 1527 ms 17-03-18 01:52:40.787 -07 000000626 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms 17-03-18 01:52:40.837 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1580 ms 17-03-18 01:52:40.837 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms 17-03-18 01:52:40.837 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:40.837 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:40.837 -07 000000480 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:40.837 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:40.837 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger start. 17-03-18 01:52:40.837 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:40.837 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:40.837 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start. 17-03-18 01:52:40.846 -07 000000626 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms. 17-03-18 01:52:40.846 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start. 17-03-18 01:52:40.856 -07 000000626 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 10 ms. 17-03-18 01:52:40.856 -07 000000626 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 14 ms. 17-03-18 01:52:40.856 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera] 17-03-18 01:52:40.896 -07 000000447 INF: FPGA: Recv @CAMSNAP turning led on 40 17-03-18 01:52:41.196 -07 000000444 INF: FPGA: Recv @CAMSNAP img rdy 340 17-03-18 01:52:41.206 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340 17-03-18 01:52:41.206 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start. 17-03-18 01:52:41.206 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start. 17-03-18 01:52:41.236 -07 000000626 INF: FPGA: Recv @CAMSNAP 380 17-03-18 01:52:41.236 -07 000000606 INF: FPGA: Recv CAMSNAP 17-03-18 01:52:41.236 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 384 ms overall 17-03-18 01:52:41.326 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 117 ms. 17-03-18 01:52:41.326 -07 000000005 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:41.326 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms. 17-03-18 01:52:41.326 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 121 ms. 17-03-18 01:52:41.336 -07 000000592 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror] 17-03-18 01:52:41.336 -07 000000576 INF: Autofocus start 17-03-18 01:52:41.336 -07 000000576 INF: MeasureProfile start 17-03-18 01:52:41.336 -07 000000430 INF: FPGA: Recv FOCMRRCUR 17-03-18 01:52:41.346 -07 000000592 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall 17-03-18 01:52:41.346 -07 000000592 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror] 17-03-18 01:52:41.346 -07 000000576 INF: MeasureProfile done 17-03-18 01:52:41.346 -07 000000576 INF: X=-23 Z correction [um]=-0.1153628 17-03-18 01:52:41.346 -07 000000576 INF: Autofocus finished 17-03-18 01:52:41.545 -07 000000576 INF: FPGA: Recv FOCMRRIMG 17-03-18 01:52:41.545 -07 000000592 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall 17-03-18 01:52:41.545 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.133859166993826. ---------- 17-03-18 01:52:41.545 -07 000000610 INF: Cycle 92 Tile 19 Exposure Settings A 392 G 188 T 188 C 392 17-03-18 01:52:41.555 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27726, sync = True, waitForSettling = True) 17-03-18 01:52:41.555 -07 000000610 INF: Z Motor: Moving to -0.126921 mm, started at -0.133859 mm, distance = 6.94 um 17-03-18 01:52:41.555 -07 000000610 INF: FPGA: Xmit ZDACW 27726\n [Z Motor] 17-03-18 01:52:41.555 -07 000000606 INF: FPGA: Recv ZDACW 17-03-18 01:52:41.565 -07 000000610 INF: FPGA: 'ZDACW 27726' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.565 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor] 17-03-18 01:52:41.565 -07 000000618 INF: FPGA: Recv ZDACR 27726 17-03-18 01:52:41.575 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.575 -07 000000610 INF: Z Motor: Waiting 150 ms for short move 17-03-18 01:52:41.725 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.725 -07 000000606 INF: FPGA: Recv ZSGSRD 29044 17-03-18 01:52:41.735 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall 17-03-18 01:52:41.735 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.735 -07 000000424 INF: FPGA: Recv ZSGSRD 29052 17-03-18 01:52:41.745 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.745 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.745 -07 000000606 INF: FPGA: Recv ZSGSRD 29047 17-03-18 01:52:41.755 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.755 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.755 -07 000000424 INF: FPGA: Recv ZSGSRD 29046 17-03-18 01:52:41.765 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.765 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.765 -07 000000444 INF: FPGA: Recv ZSGSRD 29049 17-03-18 01:52:41.775 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.775 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.775 -07 000000618 INF: FPGA: Recv ZSGSRD 29048 17-03-18 01:52:41.785 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.785 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.785 -07 000000606 INF: FPGA: Recv ZSGSRD 29050 17-03-18 01:52:41.795 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.795 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.795 -07 000000444 INF: FPGA: Recv ZSGSRD 29048 17-03-18 01:52:41.805 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.805 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.805 -07 000000606 INF: FPGA: Recv ZSGSRD 29045 17-03-18 01:52:41.815 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.815 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor] 17-03-18 01:52:41.815 -07 000000424 INF: FPGA: Recv ZSGSRD 29048 17-03-18 01:52:41.825 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.825 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor] 17-03-18 01:52:41.825 -07 000000592 INF: FPGA: Recv ZPIEZORD 24586 17-03-18 01:52:41.835 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall 17-03-18 01:52:41.835 -07 000000610 INF: Z Motor: Piezo is near 32.5 V (nominally 0 to 100 V), expect near 42.3 V, since DAC is at 4.231 V. Piezo Error = -9.8 V. 17-03-18 01:52:41.835 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.9 um, Read 10 ADC samples: Avg = 29048 (-126.2 uncal um), Error = 0.8 uncal um, Median = 29048 (-126.2 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29044 (-126.1 uncal um), Max = 29052 (-126.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um) 17-03-18 01:52:41.835 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29048, posNoise = 4, negNoise = 4 17-03-18 01:52:41.835 -07 000000610 INF: Z Motor: After move to -0.126921, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm 17-03-18 01:52:41.835 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms) 17-03-18 01:52:41.835 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current 17-03-18 01:52:41.835 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current 17-03-18 01:52:41.835 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC). 17-03-18 01:52:41.835 -07 000000447 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC). 17-03-18 01:52:41.835 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start. 17-03-18 01:52:41.835 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start. 17-03-18 01:52:41.835 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) start. 17-03-18 01:52:41.835 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start. 17-03-18 01:52:41.835 -07 000000480 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms. 17-03-18 01:52:41.835 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start. 17-03-18 01:52:41.835 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms. 17-03-18 01:52:41.835 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start. 17-03-18 01:52:41.835 -07 000000480 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms. 17-03-18 01:52:41.835 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start. 17-03-18 01:52:41.835 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms. 17-03-18 01:52:41.845 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start. 17-03-18 01:52:41.845 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms. 17-03-18 01:52:41.845 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms. 17-03-18 01:52:41.855 -07 000000480 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms. 17-03-18 01:52:41.855 -07 000000480 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms. 17-03-18 01:52:41.855 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 392 392 188 188 27903 150\n [Camera] 17-03-18 01:52:41.865 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0 17-03-18 01:52:41.865 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 91. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1422, R2=1478, Total=2900. Warn if over 250 bubbles per interval. 17-03-18 01:52:42.054 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning red on 192 17-03-18 01:52:42.453 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 584 17-03-18 01:52:42.453 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 584 17-03-18 01:52:42.453 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:42.453 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:42.453 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 644204472, 0x0, 391868352) start. 17-03-18 01:52:42.453 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 584 17-03-18 01:52:42.453 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 584 17-03-18 01:52:42.453 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:42.453 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:42.453 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start. 17-03-18 01:52:42.643 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27903 777 17-03-18 01:52:42.783 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP turning grn on 927 17-03-18 01:52:42.843 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 644204472, 0x0, 391868352) end. Duration was 397 ms. 17-03-18 01:52:42.843 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms. 17-03-18 01:52:42.843 -07 000000444 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:42.853 -07 000000480 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 395 ms. 17-03-18 01:52:42.853 -07 000000480 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms. 17-03-18 01:52:42.853 -07 000000480 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:42.853 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:42.853 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 01:52:42.853 -07 000000480 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:42.863 -07 000000480 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms. 17-03-18 01:52:42.973 -07 000000592 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1115 17-03-18 01:52:42.973 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1115 17-03-18 01:52:42.973 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start. 17-03-18 01:52:43.082 -07 000000480 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1115 17-03-18 01:52:43.082 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1115 17-03-18 01:52:43.082 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start. 17-03-18 01:52:43.092 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start. 17-03-18 01:52:43.092 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start. 17-03-18 01:52:43.092 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) start. 17-03-18 01:52:43.092 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start. 17-03-18 01:52:43.172 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP 1308 17-03-18 01:52:43.172 -07 000000606 INF: FPGA: Recv CAMDBLSNAP 17-03-18 01:52:43.172 -07 000000610 INF: FPGA: 'CAMDBLSNAP 392 392 188 188 27903 150' command took 2 ms to send, 1313 ms to get response, and 1317 ms overall 17-03-18 01:52:43.492 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 403 ms. 17-03-18 01:52:43.492 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms. 17-03-18 01:52:43.492 -07 000000629 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:43.502 -07 000000592 INF: Camera: sBCa_ReadImage(785074704, 1130172064, 0x0, 418435064) end. Duration was 403 ms. 17-03-18 01:52:43.502 -07 000000592 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 404 ms. 17-03-18 01:52:43.502 -07 000000592 INF: Camera: CopyActivePixFullImage start. 17-03-18 01:52:43.502 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:43.502 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 525 ms. 17-03-18 01:52:43.502 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start. 17-03-18 01:52:43.502 -07 000000592 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms. 17-03-18 01:52:43.511 -07 000000592 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 422 ms. 17-03-18 01:52:43.541 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms. 17-03-18 01:52:43.541 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start. 17-03-18 01:52:43.591 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 42 ms. 17-03-18 01:52:43.601 -07 000000610 INF: Enabling Skipping AutoFocus in the next 5 cycles. 17-03-18 01:52:43.601 -07 000000610 INF: Imaging Cycle 92: ScanTilesCommand Cycle 92 time end. Duration was 147044 ms. 17-03-18 01:52:43.601 -07 000000610 INF: =================== Cycle #92 =================== 17-03-18 01:52:43.601 -07 000000610 INF: =================== =================== 17-03-18 01:52:43.601 -07 000000444 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED] 17-03-18 01:52:43.611 -07 000000626 INF: FPGA: Recv EXLED1ADCR 26 17-03-18 01:52:43.611 -07 000000444 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 3 ms overall 17-03-18 01:52:43.611 -07 000000444 INF: GreenLED: Using Green data: Photodiode ADC 26 --> 0.0 mW (old method), or 1.9 mW (new method). Difference = 1.9 mW 17-03-18 01:52:43.611 -07 000000444 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 92, FrontChillerTemperature: 4.004458, FrontChillerHeatSinkTemperature: 0.404063, AmbientTemperature: 18.93495, FlowCellCompartmentTemperature: 21.98817, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 19.02468, GreenLEDSensorTemperature: 25.50177, PhotodiodePowerAdcGreen: 26, PhotodiodePowerMwGreen: 1.927049 17-03-18 01:52:43.681 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.