17-03-18 02:17:13.028 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:13.028 -07 000000610 INF: Y Motor: Entering MoveAbsStepped (target = 120609 steps, sync = True, waitForSettling = True)
17-03-18 02:17:13.028 -07 000000610 INF: Y Motor: Moving to 75.3806 mm, started at 74.8320 mm, delta = 0.5485 mm
17-03-18 02:17:13.028 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:17:13.028 -07 000000606 INF: FPGA: Recv YRDPOS 153256
17-03-18 02:17:13.038 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:17:13.038 -07 000000610 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:17:13.038 -07 000000610 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = 0.5280 mm (844.8 steps). UsingTableMove = False
17-03-18 02:17:13.038 -07 000000610 INF: Y Motor: Moving to 154379 encoder counts
17-03-18 02:17:13.038 -07 000000610 INF: FPGA: Xmit YMVTO 154379\n [Y Motor]
17-03-18 02:17:13.148 -07 000000626 INF: FPGA: Recv YMVTO 154377 872
17-03-18 02:17:13.148 -07 000000610 INF: FPGA: 'YMVTO 154379' command took 0 ms to send, 106 ms to get response, and 115 ms overall
17-03-18 02:17:13.148 -07 000000610 INF: Y Motor: Position error before settling = -2 encoder counts (-0.001 mm)
17-03-18 02:17:13.148 -07 000000610 INF: Y Motor: To move from 74.832 to 75.381 (0.549 mm) should take 877 steps, but required 872 steps (0.545 mm). Slippage = -0.003 mm (-0.01%).
17-03-18 02:17:13.148 -07 000000610 INF: Y Motor: FPGA move command 'YMVTO 154379' took 116 ms, distance = 0.549 mm, average velocity = 4.729 mm/sec
17-03-18 02:17:14.258 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.018051,
17-03-18 02:17:16.148 -07 000000610 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:17:16.148 -07 000000455 INF: FPGA: Recv YRDPOS 154380
17-03-18 02:17:16.158 -07 000000610 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:17:16.158 -07 000000610 INF: Y Motor: Encoder = 154380 = motor step 120609.4 = 75.3809 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:17:16.178 -07 000000610 INF: Y Motor: After move to 75.380580, error = 0.000279, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:17:16.178 -07 000000610 INF: Y Motor: Position error after settling = 1 encoder counts (0.000 mm), Delta during settling = 3 counts (0.001 mm)
17-03-18 02:17:16.178 -07 000000610 INF: Y Motor: Moved to 75.3809 after 3150 ms
17-03-18 02:17:16.188 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 60° ===================
17-03-18 02:17:16.188 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 60°, FC temperature to 60° ===================
17-03-18 02:17:16.188 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 60000000\n [FlowCellTempControl]
17-03-18 02:17:16.188 -07 000000455 INF: FPGA: Recv TEC2TEMP 
17-03-18 02:17:16.198 -07 000000610 INF: FPGA: 'TEC2TEMP 0 60000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:17:16.198 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 02:17:16.198 -07 000000626 INF: FPGA: Recv TEC2EN 
17-03-18 02:17:16.208 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:17:16.208 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 60° ===================
17-03-18 02:17:16.208 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:16.208 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 02:17:16.208 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:16.228 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 02:17:16.228 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 24 to 3. Moving 3 positions.
17-03-18 02:17:16.228 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 02:17:16.468 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:17:16.468 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1468, R2=1526, Total=2994. Warn if over 250 bubbles per interval.
17-03-18 02:17:16.528 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:17:16.548 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 02:17:16.548 -07 000000610 INF: ReagentValve: Move+ from 24 to 3 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 02:17:16.598 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:16.618 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:17:16.618 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:17:16.718 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:16.718 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 02:17:16.718 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:16.748 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 02:17:16.748 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 02:17:16.748 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:17:16.878 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 02:17:16.918 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:19.618 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.983999,
17-03-18 02:17:20.048 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:20.078 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:20.498 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:20.528 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:20.948 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:20.978 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:20.978 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 02:17:20.978 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:21.108 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:21.138 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:17:21.138 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 02:17:21.268 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:21.298 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:17:21.298 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 02:17:21.298 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:17:21.428 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:17:21.458 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:21.468 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 4 R1 4
17-03-18 02:17:21.468 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=4, R2=4, Total=8. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1472, R2=1530, Total=3002. Warn if over 250 bubbles per interval.
17-03-18 02:17:21.888 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:21.918 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:21.918 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 02:17:21.918 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:23.138 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 02:17:23.138 -07 000000610 INF: ReagentValve: Go to position 4 - PumpToFlowcell start
17-03-18 02:17:23.138 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:23.158 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:17:23.158 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 3 to 4. Moving 1 positions.
17-03-18 02:17:23.158 -07 000000610 INF: ReagentValve: Xmit +04\r
17-03-18 02:17:23.288 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:17:23.308 -07 000000610 INF: ReagentValve: Recv 00CD\r
17-03-18 02:17:23.308 -07 000000610 INF: ReagentValve: Move+ from 3 to 4 took 205 steps, expected 204. Error = 1 steps (0.5%)
17-03-18 02:17:23.358 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:23.378 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 02:17:23.378 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:17:23.478 -07 000000610 INF: =================== Cycle #98, Pumping Reagent CMS (4) ===================
17-03-18 02:17:23.478 -07 000000610 INF: LanePump: Pumping from 4, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 02:17:23.478 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:23.508 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:17:23.508 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 02:17:23.508 -07 000000610 INF: =================== Cycle #98, Pumping Reagent CMS (4), Aspirating port InputPort ===================
17-03-18 02:17:23.638 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 02:17:23.678 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:24.978 -07 000000502 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.975845,
17-03-18 02:17:25.118 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:25.148 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:25.568 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:25.598 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:25.598 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 02:17:25.598 -07 000000610 INF: =================== Cycle #98, Pumping Reagent CMS (4) ===================
17-03-18 02:17:25.728 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:25.758 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 02:17:25.758 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 02:17:25.888 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:25.918 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 02:17:25.918 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 02:17:25.918 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:17:26.048 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:17:26.078 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:26.468 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:17:26.468 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1472, R2=1530, Total=3002. Warn if over 250 bubbles per interval.
17-03-18 02:17:26.508 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:26.538 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:26.538 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 02:17:26.538 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:27.758 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 02:17:27.758 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 02:17:27.758 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:27.778 -07 000000610 INF: ReagentValve: Recv 04\r
17-03-18 02:17:27.778 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 4 to 3. Moving 1 positions.
17-03-18 02:17:27.778 -07 000000610 INF: ReagentValve: Xmit -03\r
17-03-18 02:17:27.928 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:17:27.948 -07 000000610 INF: ReagentValve: Recv 00E1\r
17-03-18 02:17:27.948 -07 000000610 INF: ReagentValve: Move- from 4 to 3 took 225 steps, expected 204. Error = 21 steps (10.3%)
17-03-18 02:17:27.998 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:28.018 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:17:28.018 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:17:28.118 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:28.118 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 02:17:28.118 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:28.148 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 02:17:28.148 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 02:17:28.148 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:17:28.278 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 02:17:28.318 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:29.188 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:29.218 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:29.218 -07 000000610 INF: LanePump: Waited 900 ms for pump motion to complete
17-03-18 02:17:29.218 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:29.348 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:29.378 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 02:17:29.378 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 02:17:29.508 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:29.538 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 02:17:29.538 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 02:17:29.538 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:17:29.668 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:17:29.698 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:30.128 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:30.158 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:30.158 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 02:17:30.158 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:30.158 -07 000000618 INF: WaitCommand(10000) start
17-03-18 02:17:30.158 -07 000000629 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 02:17:30.158 -07 000000629 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 02:17:30.338 -07 000000569 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.996267,
17-03-18 02:17:31.378 -07 000000629 INF: AsyncDelayTimer waited 1215ms
17-03-18 02:17:31.378 -07 000000629 INF: LanePump: Xmit /1?\r
17-03-18 02:17:31.408 -07 000000629 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 02:17:31.408 -07 000000629 INF: LanePump: Current Position of Pump is: 1110
17-03-18 02:17:31.468 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:17:31.468 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1472, R2=1530, Total=3002. Warn if over 250 bubbles per interval.
17-03-18 02:17:31.538 -07 000000629 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 02:17:31.578 -07 000000629 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:33.108 -07 000000629 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:33.138 -07 000000629 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:33.557 -07 000000629 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:33.587 -07 000000629 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:33.587 -07 000000629 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 02:17:33.587 -07 000000629 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 02:17:33.587 -07 000000629 INF: ===================  ===================
17-03-18 02:17:35.697 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.997626,
17-03-18 02:17:36.467 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:17:36.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1472, R2=1530, Total=3002. Warn if over 250 bubbles per interval.
17-03-18 02:17:40.167 -07 000000618 INF: WaitCommand(10000) end
17-03-18 02:17:40.167 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:40.167 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 250 µL, calling command Pumping to Flow Cell #1
17-03-18 02:17:40.167 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:40.197 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 02:17:40.197 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 02:17:40.197 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:17:40.327 -07 000000610 INF: LanePump: Xmit /1V400IP1500R\r
17-03-18 02:17:40.367 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:41.057 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.985358,
17-03-18 02:17:41.467 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:17:41.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1472, R2=1530, Total=3002. Warn if over 250 bubbles per interval.
17-03-18 02:17:46.417 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.997626,
17-03-18 02:17:46.467 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 02:17:46.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1473, R2=1531, Total=3004. Warn if over 250 bubbles per interval.
17-03-18 02:17:46.497 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:46.527 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:46.947 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:46.977 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:47.397 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:47.427 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:47.847 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:47.877 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:48.297 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:48.327 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:48.327 -07 000000610 INF: LanePump: Waited 7959 ms for pump motion to complete
17-03-18 02:17:48.327 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:48.457 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:48.487 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 02:17:48.487 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 02:17:48.617 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:48.647 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 02:17:48.647 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 02:17:48.647 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:17:48.777 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:17:48.807 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:49.237 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:49.267 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:49.267 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 02:17:49.267 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:50.487 -07 000000610 INF: AsyncDelayTimer waited 1218ms
17-03-18 02:17:50.487 -07 000000610 INF: ReagentValve: Go to position 1 - PumpToFlowcell start
17-03-18 02:17:50.487 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:50.507 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:17:50.507 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 1. Moving 2 positions.
17-03-18 02:17:50.507 -07 000000610 INF: ReagentValve: Xmit -01\r
17-03-18 02:17:50.717 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:17:50.737 -07 000000610 INF: ReagentValve: Recv 0198\r
17-03-18 02:17:50.737 -07 000000610 INF: ReagentValve: Move- from 3 to 1 took 408 steps, expected 408. Error = 0 steps (0.0%)
17-03-18 02:17:50.787 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:50.807 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 02:17:50.807 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:17:50.907 -07 000000610 INF: =================== Cycle #98, Pumping Reagent IMT (1) ===================
17-03-18 02:17:50.907 -07 000000610 INF: LanePump: Pumping from 1, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 02:17:50.907 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:50.937 -07 000000610 INF: LanePump: Recv /0`1500(0x03)\r\n
17-03-18 02:17:50.937 -07 000000610 INF: LanePump: Current Position of Pump is: 1500
17-03-18 02:17:50.937 -07 000000610 INF: =================== Cycle #98, Pumping Reagent IMT (1), Aspirating port InputPort ===================
17-03-18 02:17:51.067 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 02:17:51.107 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:51.467 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 4 R1 4
17-03-18 02:17:51.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=4, R2=4, Total=8. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1477, R2=1535, Total=3012. Warn if over 250 bubbles per interval.
17-03-18 02:17:51.777 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.981281,
17-03-18 02:17:52.547 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:52.577 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:52.997 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:53.027 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:53.027 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 02:17:53.027 -07 000000610 INF: =================== Cycle #98, Pumping Reagent IMT (1) ===================
17-03-18 02:17:53.157 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:53.187 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 02:17:53.187 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 02:17:53.317 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:53.347 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 02:17:53.347 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 02:17:53.347 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:17:53.477 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:17:53.507 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:53.937 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:53.967 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:53.967 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 02:17:53.967 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:55.187 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 02:17:55.187 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 02:17:55.187 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:55.207 -07 000000610 INF: ReagentValve: Recv 01\r
17-03-18 02:17:55.207 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 1 to 3. Moving 2 positions.
17-03-18 02:17:55.207 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 02:17:55.437 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:17:55.457 -07 000000610 INF: ReagentValve: Recv 01AC\r
17-03-18 02:17:55.457 -07 000000610 INF: ReagentValve: Move+ from 1 to 3 took 428 steps, expected 408. Error = 20 steps (4.9%)
17-03-18 02:17:55.507 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:17:55.527 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:17:55.527 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:17:55.627 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:55.627 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 02:17:55.627 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:55.657 -07 000000610 INF: LanePump: Recv /0`1770(0x03)\r\n
17-03-18 02:17:55.657 -07 000000610 INF: LanePump: Current Position of Pump is: 1770
17-03-18 02:17:55.657 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:17:55.787 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 02:17:55.827 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:17:56.467 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 4 R1 2
17-03-18 02:17:56.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=2, R2=4, Total=6. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:17:56.697 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:56.727 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:56.727 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 02:17:56.727 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:17:56.857 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:56.887 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 02:17:56.887 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 02:17:57.017 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:17:57.047 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 02:17:57.047 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 02:17:57.047 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:17:57.137 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.001704,
17-03-18 02:17:57.177 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:17:57.207 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:57.637 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:17:57.667 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:17:57.667 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 02:17:57.667 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:57.667 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 65° ===================
17-03-18 02:17:57.667 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 65°, FC temperature to 65° ===================
17-03-18 02:17:57.667 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 65000000\n [FlowCellTempControl]
17-03-18 02:17:57.667 -07 000000462 INF: FPGA: Recv TEC2TEMP 
17-03-18 02:17:57.677 -07 000000610 INF: FPGA: 'TEC2TEMP 0 65000000' command took 1 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:17:57.677 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 02:17:57.677 -07 000000618 INF: FPGA: Recv TEC2EN 
17-03-18 02:17:57.687 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:17:57.687 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 65° ===================
17-03-18 02:17:57.687 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:17:57.687 -07 000000610 INF: WaitCommand(30000) start
17-03-18 02:18:01.467 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:01.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:02.497 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.031682,
17-03-18 02:18:06.467 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:06.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:07.857 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.994908,
17-03-18 02:18:11.467 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:11.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:13.217 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.997626,
17-03-18 02:18:16.467 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:16.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:18.577 -07 000000590 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.023489,
17-03-18 02:18:21.467 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:21.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:23.937 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.996267,
17-03-18 02:18:26.467 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:26.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:27.697 -07 000000610 INF: WaitCommand(30000) end
17-03-18 02:18:27.697 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:18:27.697 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 5 µL, calling command Pumping to Flow Cell #1
17-03-18 02:18:27.797 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:18:27.827 -07 000000610 INF: LanePump: Recv /0`1890(0x03)\r\n
17-03-18 02:18:27.827 -07 000000610 INF: LanePump: Current Position of Pump is: 1890
17-03-18 02:18:27.827 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:18:27.957 -07 000000610 INF: LanePump: Xmit /1V400IP30R\r
17-03-18 02:18:27.997 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:18:28.537 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:18:28.567 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:18:28.567 -07 000000610 INF: LanePump: Waited 569 ms for pump motion to complete
17-03-18 02:18:28.567 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:18:28.697 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:18:28.727 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 02:18:28.727 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 02:18:28.857 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:18:28.887 -07 000000610 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 02:18:28.887 -07 000000610 INF: LanePump: Current Position of Pump is: 1920
17-03-18 02:18:28.887 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:18:29.017 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:18:29.047 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:18:29.297 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.973092,
17-03-18 02:18:29.477 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:18:29.507 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:18:29.507 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 02:18:29.507 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:18:29.507 -07 000000626 INF: WaitCommand(30000) start
17-03-18 02:18:29.507 -07 000000501 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 02:18:29.507 -07 000000501 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 02:18:30.727 -07 000000501 INF: AsyncDelayTimer waited 1214ms
17-03-18 02:18:30.727 -07 000000501 INF: LanePump: Xmit /1?\r
17-03-18 02:18:30.757 -07 000000501 INF: LanePump: Recv /0`1920(0x03)\r\n
17-03-18 02:18:30.757 -07 000000501 INF: LanePump: Current Position of Pump is: 1920
17-03-18 02:18:30.887 -07 000000501 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 02:18:30.927 -07 000000501 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:18:31.467 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:31.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:33.267 -07 000000501 INF: LanePump: Xmit /1Q\r
17-03-18 02:18:33.297 -07 000000501 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:18:33.717 -07 000000501 INF: LanePump: Xmit /1Q\r
17-03-18 02:18:33.747 -07 000000501 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:18:33.747 -07 000000501 INF: LanePump: Waited 2819 ms for pump motion to complete
17-03-18 02:18:33.747 -07 000000501 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 02:18:33.747 -07 000000501 INF: ===================  ===================
17-03-18 02:18:34.657 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.993549,
17-03-18 02:18:36.467 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:36.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:40.017 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.004458,
17-03-18 02:18:41.467 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:41.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:45.377 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.963579,
17-03-18 02:18:46.467 -07 000000501 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:46.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:50.737 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.99219,
17-03-18 02:18:51.467 -07 000000579 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:51.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:56.097 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.007176,
17-03-18 02:18:56.467 -07 000000455 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:18:56.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:18:59.517 -07 000000626 INF: WaitCommand(30000) end
17-03-18 02:18:59.517 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 22° ===================
17-03-18 02:18:59.517 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 22°, FC temperature to 22° ===================
17-03-18 02:18:59.517 -07 000000610 INF: FPGA: Xmit TEC2TEMP 0 22000000\n [FlowCellTempControl]
17-03-18 02:18:59.527 -07 000000606 INF: FPGA: Recv TEC2TEMP 
17-03-18 02:18:59.527 -07 000000610 INF: FPGA: 'TEC2TEMP 0 22000000' command took 1 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:18:59.527 -07 000000610 INF: FPGA: Xmit TEC2EN 0 1\n [FlowCellTempControl]
17-03-18 02:18:59.527 -07 000000461 INF: FPGA: Recv TEC2EN 
17-03-18 02:18:59.537 -07 000000610 INF: FPGA: 'TEC2EN 0 1' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:18:59.537 -07 000000610 INF: =================== Cycle #98, Flow Cell Temp 22° ===================
17-03-18 02:18:59.537 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:18:59.537 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:18:59.537 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 120 µL, calling command Pumping to Flow Cell #1
17-03-18 02:18:59.537 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:18:59.577 -07 000000610 INF: LanePump: Recv /0`0(0x03)\r\n
17-03-18 02:18:59.577 -07 000000610 INF: LanePump: Current Position of Pump is: 0
17-03-18 02:18:59.577 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:18:59.707 -07 000000610 INF: LanePump: Xmit /1V400IP720R\r
17-03-18 02:18:59.747 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:01.457 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.009895,
17-03-18 02:19:01.467 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:01.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1479, R2=1539, Total=3018. Warn if over 250 bubbles per interval.
17-03-18 02:19:02.877 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:02.907 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:03.327 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:03.357 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:03.777 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:03.807 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:03.807 -07 000000610 INF: LanePump: Waited 4059 ms for pump motion to complete
17-03-18 02:19:03.807 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:19:03.937 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:03.967 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:19:03.967 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 02:19:04.097 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:04.127 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:19:04.127 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 02:19:04.127 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:19:04.257 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:19:04.287 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:04.717 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:04.747 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:04.747 -07 000000610 INF: LanePump: Waited 459 ms for pump motion to complete
17-03-18 02:19:04.747 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:19:05.967 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 02:19:05.967 -07 000000610 INF: ReagentValve: Go to position 2 - PumpToFlowcell start
17-03-18 02:19:05.967 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:19:05.987 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:19:05.987 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 2. Moving 1 positions.
17-03-18 02:19:05.987 -07 000000610 INF: ReagentValve: Xmit -02\r
17-03-18 02:19:06.137 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:19:06.157 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 02:19:06.157 -07 000000610 INF: ReagentValve: Move- from 3 to 2 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 02:19:06.207 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:19:06.227 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 02:19:06.227 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:19:06.327 -07 000000610 INF: =================== Cycle #98, Pumping Reagent USM (2) ===================
17-03-18 02:19:06.327 -07 000000610 INF: LanePump: Pumping from 2, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 45 µL, calling command Pumping to Flow Cell #1
17-03-18 02:19:06.327 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:06.357 -07 000000610 INF: LanePump: Recv /0`720(0x03)\r\n
17-03-18 02:19:06.357 -07 000000610 INF: LanePump: Current Position of Pump is: 720
17-03-18 02:19:06.357 -07 000000610 INF: =================== Cycle #98, Pumping Reagent USM (2), Aspirating port InputPort ===================
17-03-18 02:19:06.467 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 1
17-03-18 02:19:06.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=1, R2=1, Total=2. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1540, Total=3020. Warn if over 250 bubbles per interval.
17-03-18 02:19:06.487 -07 000000610 INF: LanePump: Xmit /1V400IP270R\r
17-03-18 02:19:06.527 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:06.817 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.985358,
17-03-18 02:19:07.967 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:07.997 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:08.417 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:08.447 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:08.447 -07 000000610 INF: LanePump: Waited 1919 ms for pump motion to complete
17-03-18 02:19:08.447 -07 000000610 INF: =================== Cycle #98, Pumping Reagent USM (2) ===================
17-03-18 02:19:08.577 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:08.607 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 02:19:08.607 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 02:19:08.737 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:08.767 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 02:19:08.767 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 02:19:08.767 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:19:08.897 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:19:08.927 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:09.357 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:09.387 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:09.387 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 02:19:09.387 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:19:10.607 -07 000000610 INF: AsyncDelayTimer waited 1219ms
17-03-18 02:19:10.607 -07 000000610 INF: ReagentValve: Go to position 3 - PumpToFlowcell start
17-03-18 02:19:10.607 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:19:10.627 -07 000000610 INF: ReagentValve: Recv 02\r
17-03-18 02:19:10.627 -07 000000610 INF: ReagentValve: Taking shortest path '+' from 2 to 3. Moving 1 positions.
17-03-18 02:19:10.627 -07 000000610 INF: ReagentValve: Xmit +03\r
17-03-18 02:19:10.777 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:19:10.797 -07 000000610 INF: ReagentValve: Recv 00E3\r
17-03-18 02:19:10.797 -07 000000610 INF: ReagentValve: Move+ from 2 to 3 took 227 steps, expected 204. Error = 23 steps (11.3%)
17-03-18 02:19:10.847 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:19:10.867 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:19:10.867 -07 000000610 INF: LanePump: Waiting 100 ms after setting reagent valve before aspirating
17-03-18 02:19:10.967 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:19:10.967 -07 000000610 INF: LanePump: Pumping from 3, aspirate port InputPort, aspiration rate 2000 µL/min, dispense rate 7500 µL/min, volume 20 µL, calling command Pumping to Flow Cell #1
17-03-18 02:19:10.967 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:10.997 -07 000000610 INF: LanePump: Recv /0`990(0x03)\r\n
17-03-18 02:19:10.997 -07 000000610 INF: LanePump: Current Position of Pump is: 990
17-03-18 02:19:10.997 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3), Aspirating port InputPort ===================
17-03-18 02:19:11.127 -07 000000610 INF: LanePump: Xmit /1V400IP120R\r
17-03-18 02:19:11.167 -07 000000610 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:11.467 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 1 R1 0
17-03-18 02:19:11.467 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=1, Total=1. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:12.037 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:12.067 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:12.067 -07 000000610 INF: LanePump: Waited 899 ms for pump motion to complete
17-03-18 02:19:12.067 -07 000000610 INF: =================== Cycle #98, Pumping Reagent PR2 (3) ===================
17-03-18 02:19:12.177 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.975845,
17-03-18 02:19:12.197 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:12.227 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 02:19:12.227 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 02:19:12.357 -07 000000610 INF: LanePump: Xmit /1?\r
17-03-18 02:19:12.387 -07 000000610 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 02:19:12.387 -07 000000610 INF: LanePump: Current Position of Pump is: 1110
17-03-18 02:19:12.387 -07 000000610 INF: LanePump: Waiting 2 ms before setting solenoid valve back to 'aspirate' position after PumpSolution
17-03-18 02:19:12.517 -07 000000610 INF: LanePump: Xmit /1IR\r
17-03-18 02:19:12.547 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:12.977 -07 000000610 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:13.007 -07 000000610 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:13.007 -07 000000610 INF: LanePump: Waited 460 ms for pump motion to complete
17-03-18 02:19:13.007 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:19:13.007 -07 000000561 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 02:19:13.007 -07 000000444 INF: WaitCommand(10000) start
17-03-18 02:19:13.007 -07 000000561 INF: =================== Dispense to DispenseAndWait, Dispensing port OutputPort ===================
17-03-18 02:19:14.226 -07 000000561 INF: AsyncDelayTimer waited 1214ms
17-03-18 02:19:14.226 -07 000000561 INF: LanePump: Xmit /1?\r
17-03-18 02:19:14.256 -07 000000561 INF: LanePump: Recv /0`1110(0x03)\r\n
17-03-18 02:19:14.256 -07 000000561 INF: LanePump: Current Position of Pump is: 1110
17-03-18 02:19:14.386 -07 000000561 INF: LanePump: Xmit /1V1500OA0R\r
17-03-18 02:19:14.426 -07 000000561 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:15.956 -07 000000561 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:15.986 -07 000000561 INF: LanePump: Recv /0@(0x03)\r\n
17-03-18 02:19:16.406 -07 000000561 INF: LanePump: Xmit /1Q\r
17-03-18 02:19:16.436 -07 000000561 INF: LanePump: Recv /0`(0x03)\r\n
17-03-18 02:19:16.436 -07 000000561 INF: LanePump: Waited 2009 ms for pump motion to complete
17-03-18 02:19:16.436 -07 000000561 INF: =================== Dispense to DispenseAndWait ===================
17-03-18 02:19:16.436 -07 000000561 INF: ===================  ===================
17-03-18 02:19:16.466 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:16.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:17.536 -07 000000424 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.99219,
17-03-18 02:19:21.466 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:21.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:22.896 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.001704,
17-03-18 02:19:23.016 -07 000000444 INF: WaitCommand(10000) end
17-03-18 02:19:23.016 -07 000000610 INF: =================== Cycle #98, Imaging ===================
17-03-18 02:19:23.016 -07 000000610 INF: Imaging Cycle 98: ScanTilesCommand Cycle 98 time start.
17-03-18 02:19:23.026 -07 000000610 INF: ReagentValve: Go to position 24 (Plug) - Start of ScanTilesCommand
17-03-18 02:19:23.026 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:19:23.046 -07 000000610 INF: ReagentValve: Recv 03\r
17-03-18 02:19:23.046 -07 000000610 INF: ReagentValve: Taking shortest path '-' from 3 to 24. Moving 3 positions.
17-03-18 02:19:23.046 -07 000000610 INF: ReagentValve: Xmit -18\r
17-03-18 02:19:23.346 -07 000000610 INF: ReagentValve: Xmit B\r
17-03-18 02:19:23.366 -07 000000610 INF: ReagentValve: Recv 0278\r
17-03-18 02:19:23.366 -07 000000610 INF: ReagentValve: Move- from 3 to 24 took 632 steps, expected 612. Error = 20 steps (3.3%)
17-03-18 02:19:23.416 -07 000000610 INF: ReagentValve: Xmit S\r
17-03-18 02:19:23.436 -07 000000610 INF: ReagentValve: Recv 18\r
17-03-18 02:19:23.436 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:23.436 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:23.436 -07 000000606 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms start.
17-03-18 02:19:23.436 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:23.436 -07 000000606 INF: FPGA: Xmit EXLED1ON\n [RedLED]
17-03-18 02:19:23.446 -07 000000618 INF: FPGA: Recv EXLED1ON 
17-03-18 02:19:23.446 -07 000000606 INF: FPGA: 'EXLED1ON' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 02:19:23.446 -07 000000606 INF: FPGA: Xmit EXLED1ADCR\n [RedLED]
17-03-18 02:19:23.446 -07 000000444 INF: FPGA: Recv EXLED1ADCR 23129
17-03-18 02:19:23.456 -07 000000606 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:23.456 -07 000000606 INF: RedLED: Using Red data: Photodiode ADC 23129 --> 7.4 mW (old method), or 205.0 mW (new method). Difference = 197.6 mW
17-03-18 02:19:23.456 -07 000000606 INF: FPGA: Xmit EXLED1OFF\n [RedLED]
17-03-18 02:19:23.456 -07 000000424 INF: FPGA: Recv EXLED1OFF 
17-03-18 02:19:23.466 -07 000000606 INF: FPGA: 'EXLED1OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:23.466 -07 000000606 INF: RedLED: LED was on for 19 ms
17-03-18 02:19:23.466 -07 000000606 INF: RedLED: Snapping RedLED at power = 1930.000 mW, snap mode for ~0 ms end. Duration was 23 ms.
17-03-18 02:19:23.466 -07 000000606 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms start.
17-03-18 02:19:23.466 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:23.466 -07 000000606 INF: FPGA: Xmit EXLED2ON\n [GreenLED]
17-03-18 02:19:23.466 -07 000000618 INF: FPGA: Recv EXLED2ON 
17-03-18 02:19:23.476 -07 000000606 INF: FPGA: 'EXLED2ON' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:19:23.476 -07 000000606 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 02:19:23.476 -07 000000591 INF: FPGA: Recv EXLED1ADCR 2097
17-03-18 02:19:23.486 -07 000000606 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:23.486 -07 000000606 INF: GreenLED: Using Green data: Photodiode ADC 2097 --> 0.9 mW (old method), or 182.2 mW (new method). Difference = 181.3 mW
17-03-18 02:19:23.486 -07 000000606 INF: FPGA: Xmit EXLED2OFF\n [GreenLED]
17-03-18 02:19:23.486 -07 000000626 INF: FPGA: Recv EXLED2OFF 
17-03-18 02:19:23.496 -07 000000606 INF: FPGA: 'EXLED2OFF' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:23.496 -07 000000606 INF: GreenLED: LED was on for 19 ms
17-03-18 02:19:23.496 -07 000000606 INF: GreenLED: Snapping GreenLED at power = 5964.000 mW, snap mode for ~0 ms end. Duration was 28 ms.
17-03-18 02:19:23.496 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 02:19:23.496 -07 000000591 INF: FPGA: Recv EMCUR 
17-03-18 02:19:23.506 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:19:23.506 -07 000000610 INF: FPGA: Xmit EMOUT 20 70\n [Compensator]
17-03-18 02:19:24.006 -07 000000561 INF: FPGA: Recv EMOUT
17-03-18 02:19:24.006 -07 000000610 INF: FPGA: 'EMOUT 20 70' command took 0 ms to send, 497 ms to get response, and 506 ms overall
17-03-18 02:19:24.006 -07 000000610 INF: FPGA: Xmit EMCUR 75\n [Compensator]
17-03-18 02:19:24.016 -07 000000444 INF: FPGA: Recv EMCUR 
17-03-18 02:19:24.016 -07 000000610 INF: FPGA: 'EMCUR 75' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 02:19:24.016 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 02:19:24.016 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 75.380859375, Z-Position -0.126818230486456. ------
17-03-18 02:19:24.016 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:19:24.016 -07 000000626 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.17894 mm
17-03-18 02:19:24.016 -07 000000626 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:24.026 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 02:19:24.026 -07 000000561 INF: Y Motor: Moving to 59.9126 mm, started at 75.3809 mm, delta = -15.4683 mm
17-03-18 02:19:24.026 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:19:24.026 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 02:19:24.026 -07 000000569 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:19:24.026 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 39089, sync = True, waitForSettling = False)
17-03-18 02:19:24.026 -07 000000606 INF: Z Motor: Moving to -0.178938 mm, started at -0.126818 mm, distance = -52.12 um
17-03-18 02:19:24.036 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:24.036 -07 000000579 INF: FPGA: Recv YRDPOS 154381
17-03-18 02:19:24.046 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:24.046 -07 000000561 INF: Y Motor: Encoder = 154381 = motor step 120610.2 = 75.3813 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:24.046 -07 000000606 INF: FPGA: Xmit ZDACW 39089\n [Z Motor]
17-03-18 02:19:24.046 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 02:19:24.046 -07 000000561 INF: Y Motor: Last commanded position = 75.3806 mm (120608.9 steps), delta from last commanded position = -15.4680 mm (-24748.8 steps). UsingTableMove = False
17-03-18 02:19:24.046 -07 000000561 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 02:19:24.056 -07 000000606 INF: FPGA: 'ZDACW 39089' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 02:19:24.056 -07 000000561 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 02:19:24.066 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:24.066 -07 000000591 INF: FPGA: Recv ZDACR 39089
17-03-18 02:19:24.076 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 02:19:24.076 -07 000000606 INF: Z Motor: MoveAbsStepped took 48 ms (did NOT wait for settling yet))
17-03-18 02:19:24.226 -07 000000467 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:19:24.226 -07 000000569 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:19:25.736 -07 000000455 INF: FPGA: Recv YMVTO 122703 24777
17-03-18 02:19:25.736 -07 000000561 INF: FPGA: 'YMVTO 122701' command took 3 ms to send, 1678 ms to get response, and 1695 ms overall
17-03-18 02:19:25.736 -07 000000561 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 02:19:25.736 -07 000000561 INF: Y Motor: To move from 75.381 to 59.913 (-15.468 mm) should take 24750 steps, but required 24777 steps (15.486 mm). Slippage = 0.017 mm (0.00%).
17-03-18 02:19:25.736 -07 000000561 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1695 ms, distance = 15.468 mm, average velocity = 9.126 mm/sec
17-03-18 02:19:26.466 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:26.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:28.256 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.02213,
17-03-18 02:19:28.586 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:28.586 -07 000000424 INF: FPGA: Recv YRDPOS 122696
17-03-18 02:19:28.596 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:28.596 -07 000000561 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:28.616 -07 000000561 INF: Y Motor: After move to 59.912609, error = -0.002453, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:28.616 -07 000000561 INF: Y Motor: Position error after settling = -5 encoder counts (-0.002 mm), Delta during settling = -7 counts (-0.003 mm)
17-03-18 02:19:28.616 -07 000000561 INF: Y Motor: Moved to 59.9102 after 4597 ms
17-03-18 02:19:28.626 -07 000000626 INF: Z Motor: EndOfMoveAbsStepped: target = -0.178938 mm (DAC = 39089)
17-03-18 02:19:28.626 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.626 -07 000000462 INF: FPGA: Recv ZSGSRD 37147
17-03-18 02:19:28.636 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:19:28.636 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.636 -07 000000461 INF: FPGA: Recv ZSGSRD 37140
17-03-18 02:19:28.646 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.646 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.646 -07 000000561 INF: FPGA: Recv ZSGSRD 37143
17-03-18 02:19:28.656 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.656 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.656 -07 000000444 INF: FPGA: Recv ZSGSRD 37141
17-03-18 02:19:28.666 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.666 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.666 -07 000000502 INF: FPGA: Recv ZSGSRD 37146
17-03-18 02:19:28.676 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.676 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.676 -07 000000618 INF: FPGA: Recv ZSGSRD 37147
17-03-18 02:19:28.686 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.686 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.686 -07 000000629 INF: FPGA: Recv ZSGSRD 37144
17-03-18 02:19:28.696 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.696 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.696 -07 000000606 INF: FPGA: Recv ZSGSRD 37149
17-03-18 02:19:28.706 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.706 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.706 -07 000000444 INF: FPGA: Recv ZSGSRD 37135
17-03-18 02:19:28.716 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.716 -07 000000626 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:28.716 -07 000000430 INF: FPGA: Recv ZSGSRD 37141
17-03-18 02:19:28.726 -07 000000626 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.726 -07 000000626 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:28.726 -07 000000618 INF: FPGA: Recv ZPIEZORD 33418
17-03-18 02:19:28.736 -07 000000626 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:28.736 -07 000000626 INF: Z Motor: Piezo is near 51.4 V (nominally 0 to 100 V), expect near 59.6 V, since DAC is at 5.965 V. Piezo Error = -8.3 V.
17-03-18 02:19:28.736 -07 000000626 INF: Z Motor: ReadAdcAverage: Commanded Z = -178.9 um, Read 10 ADC samples: Avg = 37143 (-178.0 uncal um), Error = 0.9 uncal um, Median = 37144 (-178.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 37135 (-178.0 uncal um), Max = 37149 (-178.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:19:28.736 -07 000000626 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 37143, posNoise = 6, negNoise = 8
17-03-18 02:19:28.736 -07 000000626 INF: Z Motor: After move to -0.178938, error = 0.000000, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:28.736 -07 000000626 INF: Z Motor: Settle wait time = 4601 ms, measure time = 107 ms (allowed 150 ms), total time = 4708 ms
17-03-18 02:19:28.736 -07 000000626 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:28.786 -07 000000626 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4762 ms
17-03-18 02:19:28.786 -07 000000626 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:28.786 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:28.786 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:28.786 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:19:28.786 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:28.786 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:28.786 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:28.786 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:28.786 -07 000000561 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 02:19:28.816 -07 000000561 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 22 ms.
17-03-18 02:19:28.816 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:19:28.816 -07 000000561 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 4 ms.
17-03-18 02:19:28.816 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:19:28.836 -07 000000561 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 13 ms.
17-03-18 02:19:28.836 -07 000000561 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 42 ms.
17-03-18 02:19:28.836 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:19:28.876 -07 000000501 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:19:29.176 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:19:29.176 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:19:29.176 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:19:29.176 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1147047128, 0x0, 559484976) start.
17-03-18 02:19:29.226 -07 000000561 INF: FPGA: Recv @CAMSNAP 383
17-03-18 02:19:29.226 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 02:19:29.226 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 388 ms overall
17-03-18 02:19:29.306 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1147047128, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 02:19:29.306 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:29.306 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:19:29.306 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 02:19:29.326 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:19:29.326 -07 000000467 INF: Image SNR check: start
17-03-18 02:19:29.326 -07 000000502 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:19:29.336 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:19:29.336 -07 000000455 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:19:29.336 -07 000000467 INF: Image SNR check: pass  [peak (Max-Min)=154.58]
17-03-18 02:19:29.336 -07 000000467 INF: Autofocus start
17-03-18 02:19:29.336 -07 000000467 INF: MeasureProfile start
17-03-18 02:19:29.346 -07 000000467 INF: MeasureProfile done
17-03-18 02:19:29.346 -07 000000467 INF: X=-32  Z correction [um]=-0.2344
17-03-18 02:19:29.346 -07 000000467 INF: Autofocus finished
17-03-18 02:19:29.536 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:19:29.536 -07 000000455 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:19:29.536 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.91015625, Z-position -0.178937863592562. ----------
17-03-18 02:19:29.546 -07 000000610 INF: Cycle	98	Tile	1	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:29.546 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37551, sync = True, waitForSettling = True)
17-03-18 02:19:29.546 -07 000000610 INF: Z Motor: Moving to -0.171897 mm, started at -0.178938 mm, distance = 7.04 um
17-03-18 02:19:29.546 -07 000000610 INF: FPGA: Xmit ZDACW 37551\n [Z Motor]
17-03-18 02:19:29.546 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 02:19:29.556 -07 000000610 INF: FPGA: 'ZDACW 37551' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:29.556 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:29.556 -07 000000501 INF: FPGA: Recv ZDACR 37551
17-03-18 02:19:29.566 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.566 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:29.716 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.716 -07 000000629 INF: FPGA: Recv ZSGSRD 36057
17-03-18 02:19:29.726 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:29.726 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.726 -07 000000576 INF: FPGA: Recv ZSGSRD 36048
17-03-18 02:19:29.736 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.736 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.736 -07 000000461 INF: FPGA: Recv ZSGSRD 36049
17-03-18 02:19:29.746 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.746 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.746 -07 000000424 INF: FPGA: Recv ZSGSRD 36049
17-03-18 02:19:29.756 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.756 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.756 -07 000000569 INF: FPGA: Recv ZSGSRD 36051
17-03-18 02:19:29.766 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.766 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.766 -07 000000629 INF: FPGA: Recv ZSGSRD 36047
17-03-18 02:19:29.776 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.776 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.776 -07 000000462 INF: FPGA: Recv ZSGSRD 36048
17-03-18 02:19:29.786 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.786 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.786 -07 000000502 INF: FPGA: Recv ZSGSRD 36054
17-03-18 02:19:29.796 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.796 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.796 -07 000000444 INF: FPGA: Recv ZSGSRD 36054
17-03-18 02:19:29.806 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.806 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:29.806 -07 000000626 INF: FPGA: Recv ZSGSRD 36042
17-03-18 02:19:29.816 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.816 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:29.816 -07 000000461 INF: FPGA: Recv ZPIEZORD 31951
17-03-18 02:19:29.826 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:29.826 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.730 V. Piezo Error = -9.0 V.
17-03-18 02:19:29.826 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36050 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36049 (-171.0 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 36042 (-171.0 uncal um), Max = 36057 (-171.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:19:29.826 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36050, posNoise = 7, negNoise = 8
17-03-18 02:19:29.826 -07 000000610 INF: Z Motor: After move to -0.171897, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:29.826 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 02:19:29.826 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:29.826 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:29.826 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:29.826 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:29.826 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:29.826 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:29.826 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:29.826 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:29.826 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:29.826 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:29.826 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:29.826 -07 000000618 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 02:19:29.836 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:19:29.836 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:29.846 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 02:19:29.846 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:19:29.856 -07 000000618 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 22 ms.
17-03-18 02:19:29.856 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:29.856 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:19:29.856 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:29.866 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 02:19:29.866 -07 000000618 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 38 ms.
17-03-18 02:19:29.866 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37727 150\n [Camera]
17-03-18 02:19:30.066 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:30.466 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:30.466 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:30.466 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:30.466 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:30.466 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:19:30.466 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:30.466 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:30.466 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:30.586 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:30.586 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 02:19:30.656 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37727 779
17-03-18 02:19:30.806 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:30.856 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 396 ms.
17-03-18 02:19:30.856 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 02:19:30.856 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:30.866 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:19:30.866 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 02:19:30.976 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 398 ms.
17-03-18 02:19:30.976 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 02:19:30.976 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:30.986 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 2 ms.
17-03-18 02:19:30.986 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 523 ms.
17-03-18 02:19:30.996 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:30.996 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:30.996 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:30.996 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:30.996 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:30.996 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:31.006 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:31.006 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:19:31.006 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:31.006 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:19:31.186 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:19:31.186 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:31.186 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37727 150' command took 4 ms to send, 1305 ms to get response, and 1317 ms overall
17-03-18 02:19:31.186 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.171867
17-03-18 02:19:31.186 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.17187 mm
17-03-18 02:19:31.186 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:31.186 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 02:19:31.196 -07 000000618 INF: Y Motor: Moving to 60.7426 mm, started at 59.9102 mm, delta = 0.8325 mm
17-03-18 02:19:31.196 -07 000000590 INF: Z Motor: Entering MoveAbsStepped (DAC = 37544, sync = True, waitForSettling = False)
17-03-18 02:19:31.196 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:31.196 -07 000000590 INF: Z Motor: Moving to -0.171865 mm, started at -0.171916 mm, distance = 0.05 um
17-03-18 02:19:31.196 -07 000000462 INF: FPGA: Recv YRDPOS 122696
17-03-18 02:19:31.206 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:31.206 -07 000000618 INF: Y Motor: Encoder = 122696 = motor step 95856.3 = 59.9102 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:31.206 -07 000000618 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:31.206 -07 000000618 INF: Y Motor: Moving 1332 steps2
17-03-18 02:19:31.206 -07 000000590 INF: FPGA: Xmit ZDACW 37544\n [Z Motor]
17-03-18 02:19:31.216 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 02:19:31.216 -07 000000590 INF: FPGA: 'ZDACW 37544' command took 4 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:31.216 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:31.226 -07 000000590 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:31.226 -07 000000626 INF: FPGA: Recv ZDACR 37544
17-03-18 02:19:31.236 -07 000000590 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:31.236 -07 000000590 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 02:19:31.406 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 400 ms.
17-03-18 02:19:31.406 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 02:19:31.406 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:31.406 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 02:19:31.406 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 399 ms.
17-03-18 02:19:31.406 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:31.406 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:31.406 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 413 ms.
17-03-18 02:19:31.406 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:31.416 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 418 ms.
17-03-18 02:19:31.466 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:31.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:31.586 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 02:19:31.586 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 02:19:31.626 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:31.626 -07 000000467 INF: FPGA: Recv YRDPOS 124380
17-03-18 02:19:31.636 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:19:31.636 -07 000000618 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:31.636 -07 000000618 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 02:19:31.636 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.832 mm, average velocity = 2.162 mm/sec
17-03-18 02:19:32.586 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:32.586 -07 000000606 INF: FPGA: Recv YRDPOS 124380
17-03-18 02:19:32.596 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:32.596 -07 000000618 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:32.616 -07 000000618 INF: Y Motor: After move to 60.742607, error = -0.010185, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:32.616 -07 000000618 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:32.616 -07 000000618 INF: Y Motor: Moved to 60.7324 after 1429 ms (table move)
17-03-18 02:19:32.626 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171865 mm (DAC = 37544)
17-03-18 02:19:32.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.626 -07 000000569 INF: FPGA: Recv ZSGSRD 36042
17-03-18 02:19:32.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:32.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.636 -07 000000467 INF: FPGA: Recv ZSGSRD 36042
17-03-18 02:19:32.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.646 -07 000000444 INF: FPGA: Recv ZSGSRD 36045
17-03-18 02:19:32.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.656 -07 000000606 INF: FPGA: Recv ZSGSRD 36049
17-03-18 02:19:32.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.676 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.676 -07 000000430 INF: FPGA: Recv ZSGSRD 36039
17-03-18 02:19:32.686 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:32.686 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.686 -07 000000512 INF: FPGA: Recv ZSGSRD 36040
17-03-18 02:19:32.696 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.696 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.696 -07 000000444 INF: FPGA: Recv ZSGSRD 36043
17-03-18 02:19:32.706 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.706 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.706 -07 000000561 INF: FPGA: Recv ZSGSRD 36044
17-03-18 02:19:32.716 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.716 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.716 -07 000000576 INF: FPGA: Recv ZSGSRD 36043
17-03-18 02:19:32.726 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.726 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.726 -07 000000579 INF: FPGA: Recv ZSGSRD 36043
17-03-18 02:19:32.736 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.736 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:32.736 -07 000000626 INF: FPGA: Recv ZPIEZORD 31989
17-03-18 02:19:32.746 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:19:32.746 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.729 V. Piezo Error = -9.0 V.
17-03-18 02:19:32.746 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.9 um, Read 10 ADC samples: Avg = 36043 (-171.0 uncal um), Error = 0.9 uncal um, Median = 36043 (-171.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36039 (-171.0 uncal um), Max = 36049 (-171.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:19:32.746 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36043, posNoise = 6, negNoise = 4
17-03-18 02:19:32.746 -07 000000610 INF: Z Motor: After move to -0.171865, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:32.746 -07 000000610 INF: Z Motor: Settle wait time = 1431 ms, measure time = 119 ms (allowed 150 ms), total time = 1550 ms
17-03-18 02:19:32.746 -07 000000610 INF: Z Motor: Waiting extra 31 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:32.786 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 02:19:32.786 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:32.786 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.732421875, Z-position -0.171871230236625. ----------
17-03-18 02:19:32.786 -07 000000610 INF: Cycle	98	Tile	2	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:32.786 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37368, sync = True, waitForSettling = True)
17-03-18 02:19:32.786 -07 000000610 INF: Z Motor: Moving to -0.171060 mm, started at -0.171871 mm, distance = 0.81 um
17-03-18 02:19:32.786 -07 000000610 INF: FPGA: Xmit ZDACW 37368\n [Z Motor]
17-03-18 02:19:32.786 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 02:19:32.796 -07 000000610 INF: FPGA: 'ZDACW 37368' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:19:32.796 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:32.796 -07 000000501 INF: FPGA: Recv ZDACR 37368
17-03-18 02:19:32.806 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.806 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:32.956 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.956 -07 000000424 INF: FPGA: Recv ZSGSRD 35918
17-03-18 02:19:32.966 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:32.966 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.966 -07 000000455 INF: FPGA: Recv ZSGSRD 35921
17-03-18 02:19:32.976 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:32.986 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.986 -07 000000576 INF: FPGA: Recv ZSGSRD 35918
17-03-18 02:19:32.996 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:32.996 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:32.996 -07 000000618 INF: FPGA: Recv ZSGSRD 35917
17-03-18 02:19:33.006 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:33.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:33.026 -07 000000618 INF: FPGA: Recv ZSGSRD 35913
17-03-18 02:19:33.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:19:33.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:33.036 -07 000000626 INF: FPGA: Recv ZSGSRD 35924
17-03-18 02:19:33.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:33.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:33.056 -07 000000512 INF: FPGA: Recv ZSGSRD 35915
17-03-18 02:19:33.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:33.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:33.066 -07 000000579 INF: FPGA: Recv ZSGSRD 35920
17-03-18 02:19:33.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:33.086 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:33.086 -07 000000618 INF: FPGA: Recv ZSGSRD 35920
17-03-18 02:19:33.096 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:33.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:33.096 -07 000000501 INF: FPGA: Recv ZSGSRD 35915
17-03-18 02:19:33.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:33.106 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:33.106 -07 000000569 INF: FPGA: Recv ZPIEZORD 31795
17-03-18 02:19:33.116 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:33.116 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.702 V. Piezo Error = -9.1 V.
17-03-18 02:19:33.116 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.1 um, Read 10 ADC samples: Avg = 35918 (-170.2 uncal um), Error = 0.9 uncal um, Median = 35918 (-170.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35913 (-170.2 uncal um), Max = 35924 (-170.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:19:33.116 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35918, posNoise = 6, negNoise = 5
17-03-18 02:19:33.116 -07 000000610 INF: Z Motor: After move to -0.171060, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:33.116 -07 000000610 INF: Z Motor: MoveAbsStepped took 327 ms)
17-03-18 02:19:33.116 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:33.116 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:33.116 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:33.116 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:33.116 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:33.116 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:33.116 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:33.116 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:33.116 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:33.116 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:33.116 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:33.116 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:33.126 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:19:33.126 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:33.126 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 02:19:33.126 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:33.136 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 02:19:33.136 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 02:19:33.136 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 11 ms.
17-03-18 02:19:33.136 -07 000000462 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 16 ms.
17-03-18 02:19:33.136 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37544 150\n [Camera]
17-03-18 02:19:33.336 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:33.616 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.005817,
17-03-18 02:19:33.726 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:33.736 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:33.736 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:33.736 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:33.736 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1161723208, 0x0, 391868352) start.
17-03-18 02:19:33.736 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:33.736 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:33.736 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:33.736 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:33.736 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 02:19:33.926 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37544 780
17-03-18 02:19:34.076 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:34.136 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 1161723208, 0x0, 391868352) end. Duration was 402 ms.
17-03-18 02:19:34.136 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 02:19:34.136 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:34.136 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 402 ms.
17-03-18 02:19:34.136 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 02:19:34.136 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:34.136 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:34.136 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 02:19:34.146 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:34.146 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 413 ms.
17-03-18 02:19:34.266 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:34.266 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:34.266 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:34.266 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:34.266 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 02:19:34.266 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:34.266 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:34.266 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:34.266 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:34.266 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 02:19:34.456 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:19:34.456 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:34.456 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37544 150' command took 2 ms to send, 1313 ms to get response, and 1317 ms overall
17-03-18 02:19:34.456 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.171769
17-03-18 02:19:34.456 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.17177 mm
17-03-18 02:19:34.456 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:34.576 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 02:19:34.576 -07 000000626 INF: Y Motor: Moving to 61.5726 mm, started at 60.7324 mm, delta = 0.8402 mm
17-03-18 02:19:34.576 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:34.576 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 37523, sync = True, waitForSettling = False)
17-03-18 02:19:34.576 -07 000000579 INF: Z Motor: Moving to -0.171769 mm, started at -0.171068 mm, distance = -0.70 um
17-03-18 02:19:34.576 -07 000000590 INF: FPGA: Recv YRDPOS 124380
17-03-18 02:19:34.586 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:34.586 -07 000000626 INF: Y Motor: Encoder = 124380 = motor step 97171.9 = 60.7324 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:34.586 -07 000000626 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:34.586 -07 000000626 INF: Y Motor: Moving 1344 steps-21
17-03-18 02:19:34.586 -07 000000579 INF: FPGA: Xmit ZDACW 37523\n [Z Motor]
17-03-18 02:19:34.586 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 02:19:34.596 -07 000000579 INF: FPGA: 'ZDACW 37523' command took 1 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:19:34.596 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:34.596 -07 000000591 INF: FPGA: Recv ZDACR 37523
17-03-18 02:19:34.606 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:34.606 -07 000000579 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 02:19:34.606 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:34.656 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 02:19:34.656 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 02:19:34.656 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:34.666 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 02:19:34.666 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 02:19:34.666 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:34.666 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:34.666 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 400 ms.
17-03-18 02:19:34.666 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:34.676 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 02:19:34.976 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 02:19:34.976 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:19:35.026 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:35.026 -07 000000590 INF: FPGA: Recv YRDPOS 126081
17-03-18 02:19:35.036 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:19:35.036 -07 000000626 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:35.036 -07 000000626 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 02:19:35.036 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.840 mm, average velocity = 2.111 mm/sec
17-03-18 02:19:35.986 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:35.986 -07 000000590 INF: FPGA: Recv YRDPOS 126081
17-03-18 02:19:35.996 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:35.996 -07 000000626 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:36.016 -07 000000626 INF: Y Motor: After move to 61.572609, error = -0.009621, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:36.016 -07 000000626 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:36.016 -07 000000626 INF: Y Motor: Moved to 61.5630 after 1445 ms (table move)
17-03-18 02:19:36.026 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171769 mm (DAC = 37523)
17-03-18 02:19:36.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.026 -07 000000502 INF: FPGA: Recv ZSGSRD 36026
17-03-18 02:19:36.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.036 -07 000000462 INF: FPGA: Recv ZSGSRD 36033
17-03-18 02:19:36.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.046 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.046 -07 000000576 INF: FPGA: Recv ZSGSRD 36036
17-03-18 02:19:36.056 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.056 -07 000000461 INF: FPGA: Recv ZSGSRD 36030
17-03-18 02:19:36.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.066 -07 000000444 INF: FPGA: Recv ZSGSRD 36028
17-03-18 02:19:36.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.076 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.076 -07 000000579 INF: FPGA: Recv ZSGSRD 36028
17-03-18 02:19:36.086 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.086 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.086 -07 000000430 INF: FPGA: Recv ZSGSRD 36024
17-03-18 02:19:36.096 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.096 -07 000000606 INF: FPGA: Recv ZSGSRD 36028
17-03-18 02:19:36.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.106 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.106 -07 000000591 INF: FPGA: Recv ZSGSRD 36025
17-03-18 02:19:36.116 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.116 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.116 -07 000000424 INF: FPGA: Recv ZSGSRD 36027
17-03-18 02:19:36.126 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.126 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:36.126 -07 000000512 INF: FPGA: Recv ZPIEZORD 31990
17-03-18 02:19:36.136 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.136 -07 000000610 INF: Z Motor: Piezo is near 48.3 V (nominally 0 to 100 V), expect near 57.3 V, since DAC is at 5.726 V. Piezo Error = -8.9 V.
17-03-18 02:19:36.136 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.8 um, Read 10 ADC samples: Avg = 36028 (-170.9 uncal um), Error = 0.9 uncal um, Median = 36028 (-170.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 36024 (-170.9 uncal um), Max = 36036 (-170.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:19:36.136 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36028, posNoise = 8, negNoise = 4
17-03-18 02:19:36.136 -07 000000610 INF: Z Motor: After move to -0.171769, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:36.136 -07 000000610 INF: Z Motor: Settle wait time = 1447 ms, measure time = 110 ms (allowed 150 ms), total time = 1557 ms
17-03-18 02:19:36.136 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:36.176 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1714 ms
17-03-18 02:19:36.176 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:36.176 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56298828125, Z-position -0.171774867054499. ----------
17-03-18 02:19:36.176 -07 000000610 INF: Cycle	98	Tile	3	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:36.176 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37346, sync = True, waitForSettling = True)
17-03-18 02:19:36.176 -07 000000610 INF: Z Motor: Moving to -0.170959 mm, started at -0.171775 mm, distance = 0.82 um
17-03-18 02:19:36.176 -07 000000610 INF: FPGA: Xmit ZDACW 37346\n [Z Motor]
17-03-18 02:19:36.176 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 02:19:36.186 -07 000000610 INF: FPGA: 'ZDACW 37346' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:19:36.186 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:36.186 -07 000000576 INF: FPGA: Recv ZDACR 37346
17-03-18 02:19:36.196 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.196 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:36.346 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.346 -07 000000502 INF: FPGA: Recv ZSGSRD 35902
17-03-18 02:19:36.356 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.356 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.356 -07 000000569 INF: FPGA: Recv ZSGSRD 35913
17-03-18 02:19:36.366 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.366 -07 000000606 INF: FPGA: Recv ZSGSRD 35902
17-03-18 02:19:36.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.376 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.376 -07 000000629 INF: FPGA: Recv ZSGSRD 35909
17-03-18 02:19:36.386 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.386 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.386 -07 000000444 INF: FPGA: Recv ZSGSRD 35907
17-03-18 02:19:36.396 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.396 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.396 -07 000000502 INF: FPGA: Recv ZSGSRD 35901
17-03-18 02:19:36.406 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.406 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.406 -07 000000462 INF: FPGA: Recv ZSGSRD 35906
17-03-18 02:19:36.416 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.416 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.416 -07 000000512 INF: FPGA: Recv ZSGSRD 35901
17-03-18 02:19:36.426 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.426 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.426 -07 000000591 INF: FPGA: Recv ZSGSRD 35905
17-03-18 02:19:36.436 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.436 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:36.436 -07 000000576 INF: FPGA: Recv ZSGSRD 35904
17-03-18 02:19:36.446 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.446 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:36.446 -07 000000626 INF: FPGA: Recv ZPIEZORD 31803
17-03-18 02:19:36.456 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:36.456 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 57.0 V, since DAC is at 5.699 V. Piezo Error = -9.0 V.
17-03-18 02:19:36.456 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.0 um, Read 10 ADC samples: Avg = 35905 (-170.1 uncal um), Error = 0.9 uncal um, Median = 35904 (-170.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 35901 (-170.1 uncal um), Max = 35913 (-170.2 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:19:36.456 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35905, posNoise = 8, negNoise = 4
17-03-18 02:19:36.456 -07 000000610 INF: Z Motor: After move to -0.170959, error = -0.000026, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:36.456 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 02:19:36.456 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:36.456 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:36.456 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:36.456 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:36.456 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:36.456 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:36.456 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:36.456 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:36.456 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:36.456 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:36.456 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:36.456 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:36.466 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:19:36.466 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:36.466 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 02:19:36.466 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:36.466 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:36.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:36.476 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 02:19:36.476 -07 000000424 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:19:36.476 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 02:19:36.476 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:19:36.476 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37523 150\n [Camera]
17-03-18 02:19:36.676 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:37.076 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:37.076 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:37.076 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:37.076 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:37.076 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:37.076 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:19:37.076 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:37.076 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:37.086 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:37.086 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:19:37.266 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37523 779
17-03-18 02:19:37.416 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:37.456 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 02:19:37.456 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 02:19:37.456 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:37.456 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:37.456 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:19:37.456 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 02:19:37.456 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 02:19:37.456 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:37.466 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:37.476 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:19:37.606 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:37.606 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:37.606 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:37.606 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:37.606 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:37.606 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:37.606 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:37.616 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:19:37.616 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:37.616 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 02:19:37.796 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:19:37.796 -07 000000606 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:37.796 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37523 150' command took 2 ms to send, 1305 ms to get response, and 1317 ms overall
17-03-18 02:19:37.796 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.171256
17-03-18 02:19:37.796 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.17126 mm
17-03-18 02:19:37.796 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:37.796 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 02:19:37.796 -07 000000512 INF: Y Motor: Moving to 62.4026 mm, started at 61.5630 mm, delta = 0.8396 mm
17-03-18 02:19:37.796 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:37.806 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 37411, sync = True, waitForSettling = False)
17-03-18 02:19:37.806 -07 000000455 INF: Z Motor: Moving to -0.171257 mm, started at -0.170985 mm, distance = -0.27 um
17-03-18 02:19:37.806 -07 000000618 INF: FPGA: Recv YRDPOS 126081
17-03-18 02:19:37.816 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:37.816 -07 000000512 INF: Y Motor: Encoder = 126081 = motor step 98500.8 = 61.5630 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:37.816 -07 000000512 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:37.816 -07 000000512 INF: Y Motor: Moving 1343 steps-20
17-03-18 02:19:37.816 -07 000000455 INF: FPGA: Xmit ZDACW 37411\n [Z Motor]
17-03-18 02:19:37.816 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 02:19:37.826 -07 000000455 INF: FPGA: 'ZDACW 37411' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:37.826 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:37.836 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:37.836 -07 000000430 INF: FPGA: Recv ZDACR 37411
17-03-18 02:19:37.846 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:37.846 -07 000000455 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 02:19:37.996 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 02:19:37.996 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:19:37.996 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:37.996 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:37.996 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 02:19:38.006 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 02:19:38.006 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 02:19:38.006 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:38.006 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:38.016 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 403 ms.
17-03-18 02:19:38.196 -07 000000424 INF: FPGA: Recv YMVTILE
17-03-18 02:19:38.196 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 1 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 02:19:38.256 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:38.256 -07 000000502 INF: FPGA: Recv YRDPOS 127785
17-03-18 02:19:38.266 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:38.266 -07 000000512 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:38.266 -07 000000512 INF: Y Motor: Position error before settling (table move) = -16 encoder counts (-0.008 mm)
17-03-18 02:19:38.266 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 389 ms, distance = 0.840 mm, average velocity = 2.158 mm/sec
17-03-18 02:19:38.976 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.983999,
17-03-18 02:19:39.216 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:39.216 -07 000000444 INF: FPGA: Recv YRDPOS 127785
17-03-18 02:19:39.226 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:39.226 -07 000000512 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:39.246 -07 000000512 INF: Y Motor: After move to 62.402607, error = -0.007587, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:39.246 -07 000000512 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:39.246 -07 000000512 INF: Y Motor: Moved to 62.3950 after 1447 ms (table move)
17-03-18 02:19:39.246 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.171257 mm (DAC = 37411)
17-03-18 02:19:39.246 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.256 -07 000000629 INF: FPGA: Recv ZSGSRD 35949
17-03-18 02:19:39.266 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:39.266 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.266 -07 000000455 INF: FPGA: Recv ZSGSRD 35946
17-03-18 02:19:39.276 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.276 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.276 -07 000000561 INF: FPGA: Recv ZSGSRD 35943
17-03-18 02:19:39.286 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.286 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.286 -07 000000444 INF: FPGA: Recv ZSGSRD 35945
17-03-18 02:19:39.296 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.296 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.296 -07 000000512 INF: FPGA: Recv ZSGSRD 35944
17-03-18 02:19:39.306 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.306 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.306 -07 000000606 INF: FPGA: Recv ZSGSRD 35950
17-03-18 02:19:39.316 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.316 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.316 -07 000000455 INF: FPGA: Recv ZSGSRD 35950
17-03-18 02:19:39.326 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.326 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.326 -07 000000424 INF: FPGA: Recv ZSGSRD 35952
17-03-18 02:19:39.336 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.336 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.336 -07 000000444 INF: FPGA: Recv ZSGSRD 35948
17-03-18 02:19:39.346 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.346 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.346 -07 000000461 INF: FPGA: Recv ZSGSRD 35944
17-03-18 02:19:39.356 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.356 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:39.356 -07 000000629 INF: FPGA: Recv ZPIEZORD 31886
17-03-18 02:19:39.366 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.366 -07 000000610 INF: Z Motor: Piezo is near 48.1 V (nominally 0 to 100 V), expect near 57.1 V, since DAC is at 5.709 V. Piezo Error = -9.0 V.
17-03-18 02:19:39.366 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -171.3 um, Read 10 ADC samples: Avg = 35947 (-170.4 uncal um), Error = 0.9 uncal um, Median = 35947 (-170.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35943 (-170.4 uncal um), Max = 35952 (-170.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:19:39.366 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35947, posNoise = 5, negNoise = 4
17-03-18 02:19:39.366 -07 000000610 INF: Z Motor: After move to -0.171257, error = 0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:39.366 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 111 ms (allowed 150 ms), total time = 1560 ms
17-03-18 02:19:39.366 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:39.406 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 02:19:39.406 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:39.406 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.39501953125, Z-position -0.171254505871016. ----------
17-03-18 02:19:39.406 -07 000000610 INF: Cycle	98	Tile	4	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:39.406 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37234, sync = True, waitForSettling = True)
17-03-18 02:19:39.406 -07 000000610 INF: Z Motor: Moving to -0.170446 mm, started at -0.171255 mm, distance = 0.81 um
17-03-18 02:19:39.406 -07 000000610 INF: FPGA: Xmit ZDACW 37234\n [Z Motor]
17-03-18 02:19:39.416 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 02:19:39.416 -07 000000610 INF: FPGA: 'ZDACW 37234' command took 0 ms to send, 2 ms to get response, and 6 ms overall
17-03-18 02:19:39.416 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:39.416 -07 000000579 INF: FPGA: Recv ZDACR 37234
17-03-18 02:19:39.426 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:39.426 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:39.576 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.576 -07 000000606 INF: FPGA: Recv ZSGSRD 35824
17-03-18 02:19:39.586 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:39.586 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.586 -07 000000461 INF: FPGA: Recv ZSGSRD 35823
17-03-18 02:19:39.596 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.596 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.596 -07 000000424 INF: FPGA: Recv ZSGSRD 35819
17-03-18 02:19:39.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.606 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.606 -07 000000502 INF: FPGA: Recv ZSGSRD 35823
17-03-18 02:19:39.616 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.616 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.616 -07 000000561 INF: FPGA: Recv ZSGSRD 35831
17-03-18 02:19:39.626 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.626 -07 000000576 INF: FPGA: Recv ZSGSRD 35819
17-03-18 02:19:39.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.636 -07 000000629 INF: FPGA: Recv ZSGSRD 35832
17-03-18 02:19:39.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.646 -07 000000576 INF: FPGA: Recv ZSGSRD 35833
17-03-18 02:19:39.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.656 -07 000000467 INF: FPGA: Recv ZSGSRD 35817
17-03-18 02:19:39.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.666 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:39.666 -07 000000626 INF: FPGA: Recv ZSGSRD 35824
17-03-18 02:19:39.676 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.676 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:39.676 -07 000000444 INF: FPGA: Recv ZPIEZORD 31692
17-03-18 02:19:39.686 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:39.686 -07 000000610 INF: Z Motor: Piezo is near 47.7 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.682 V. Piezo Error = -9.1 V.
17-03-18 02:19:39.686 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.4 um, Read 10 ADC samples: Avg = 35824 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35824 (-169.6 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35817 (-169.5 uncal um), Max = 35833 (-169.6 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:19:39.686 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35824, posNoise = 9, negNoise = 7
17-03-18 02:19:39.686 -07 000000610 INF: Z Motor: After move to -0.170446, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:39.686 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 02:19:39.686 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:39.686 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:39.686 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:39.686 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:39.686 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:39.686 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:39.686 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:39.686 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:39.686 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:39.686 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:39.686 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:39.686 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:39.696 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:19:39.696 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:39.696 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:19:39.696 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:39.706 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:19:39.706 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:19:39.706 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 02:19:39.706 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:19:39.716 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37411 150\n [Camera]
17-03-18 02:19:39.916 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:40.306 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:40.306 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:40.306 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:40.306 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:40.306 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:40.306 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:40.306 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:40.306 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:19:40.316 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:40.316 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 02:19:40.496 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37411 779
17-03-18 02:19:40.646 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:40.686 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:19:40.686 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 02:19:40.686 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:40.686 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 02:19:40.686 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 02:19:40.686 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:40.696 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 02:19:40.696 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:19:40.696 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:19:40.706 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:19:40.836 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:40.836 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:40.836 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:40.836 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:40.836 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:19:40.836 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:40.836 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:40.836 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:40.836 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:40.836 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:19:41.026 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:19:41.026 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:41.026 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37411 150' command took 2 ms to send, 1307 ms to get response, and 1317 ms overall
17-03-18 02:19:41.026 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 02:19:41.036 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.39501953125, Z-Position -0.170464327777579. ------
17-03-18 02:19:41.036 -07 000000512 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:19:41.036 -07 000000569 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.17697 mm
17-03-18 02:19:41.036 -07 000000569 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:41.166 -07 000000424 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:19:41.166 -07 000000512 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 128 ms overall
17-03-18 02:19:41.166 -07 000000512 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:19:41.166 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 38660, sync = True, waitForSettling = False)
17-03-18 02:19:41.166 -07 000000591 INF: Z Motor: Moving to -0.176974 mm, started at -0.170464 mm, distance = -6.51 um
17-03-18 02:19:41.166 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 02:19:41.166 -07 000000462 INF: Y Motor: Moving to 63.2326 mm, started at 62.3950 mm, delta = 0.8376 mm
17-03-18 02:19:41.176 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:41.176 -07 000000606 INF: FPGA: Recv YRDPOS 127785
17-03-18 02:19:41.186 -07 000000591 INF: FPGA: Xmit ZDACW 38660\n [Z Motor]
17-03-18 02:19:41.186 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:19:41.186 -07 000000462 INF: Y Motor: Encoder = 127785 = motor step 99832.0 = 62.3950 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:41.186 -07 000000462 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:41.186 -07 000000462 INF: Y Motor: Moving 1340 steps-16
17-03-18 02:19:41.186 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 02:19:41.196 -07 000000591 INF: FPGA: 'ZDACW 38660' command took 0 ms to send, 0 ms to get response, and 26 ms overall
17-03-18 02:19:41.196 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:41.206 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:41.206 -07 000000561 INF: FPGA: Recv ZDACR 38660
17-03-18 02:19:41.216 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:41.216 -07 000000591 INF: Z Motor: MoveAbsStepped took 47 ms (did NOT wait for settling yet))
17-03-18 02:19:41.236 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 394 ms.
17-03-18 02:19:41.236 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 02:19:41.236 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:41.236 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:41.246 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 02:19:41.256 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 414 ms.
17-03-18 02:19:41.256 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 414 ms.
17-03-18 02:19:41.256 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:41.256 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:19:41.256 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 421 ms.
17-03-18 02:19:41.366 -07 000000502 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:19:41.366 -07 000000512 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 02:19:41.466 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:41.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:41.566 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 02:19:41.576 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 390 ms overall
17-03-18 02:19:41.616 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:41.626 -07 000000590 INF: FPGA: Recv YRDPOS 129481
17-03-18 02:19:41.626 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 5 ms overall
17-03-18 02:19:41.626 -07 000000462 INF: Y Motor: Encoder = 129481 = motor step 101157.0 = 63.2231 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:41.626 -07 000000462 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 02:19:41.626 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 390 ms, distance = 0.838 mm, average velocity = 2.148 mm/sec
17-03-18 02:19:42.576 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:42.576 -07 000000444 INF: FPGA: Recv YRDPOS 129482
17-03-18 02:19:42.586 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.586 -07 000000462 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:42.606 -07 000000462 INF: Y Motor: After move to 63.232609, error = -0.008976, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:42.606 -07 000000462 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:19:42.606 -07 000000462 INF: Y Motor: Moved to 63.2236 after 1443 ms (table move)
17-03-18 02:19:42.616 -07 000000569 INF: Z Motor: EndOfMoveAbsStepped: target = -0.176974 mm (DAC = 38660)
17-03-18 02:19:42.616 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.616 -07 000000501 INF: FPGA: Recv ZSGSRD 36835
17-03-18 02:19:42.626 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.626 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.626 -07 000000590 INF: FPGA: Recv ZSGSRD 36836
17-03-18 02:19:42.636 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.636 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.636 -07 000000626 INF: FPGA: Recv ZSGSRD 36848
17-03-18 02:19:42.646 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.646 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.646 -07 000000618 INF: FPGA: Recv ZSGSRD 36840
17-03-18 02:19:42.656 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.656 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.656 -07 000000462 INF: FPGA: Recv ZSGSRD 36839
17-03-18 02:19:42.666 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.666 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.666 -07 000000501 INF: FPGA: Recv ZSGSRD 36835
17-03-18 02:19:42.676 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.676 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.676 -07 000000430 INF: FPGA: Recv ZSGSRD 36839
17-03-18 02:19:42.686 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.686 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.686 -07 000000591 INF: FPGA: Recv ZSGSRD 36835
17-03-18 02:19:42.696 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.696 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.696 -07 000000579 INF: FPGA: Recv ZSGSRD 36840
17-03-18 02:19:42.706 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.706 -07 000000569 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:42.706 -07 000000462 INF: FPGA: Recv ZSGSRD 36839
17-03-18 02:19:42.716 -07 000000569 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:42.716 -07 000000569 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:42.716 -07 000000561 INF: FPGA: Recv ZPIEZORD 33024
17-03-18 02:19:42.726 -07 000000569 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:19:42.726 -07 000000569 INF: Z Motor: Piezo is near 50.5 V (nominally 0 to 100 V), expect near 59.0 V, since DAC is at 5.899 V. Piezo Error = -8.4 V.
17-03-18 02:19:42.726 -07 000000569 INF: Z Motor: ReadAdcAverage: Commanded Z = -177.0 um, Read 10 ADC samples: Avg = 36839 (-176.1 uncal um), Error = 0.9 uncal um, Median = 36839 (-176.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 36835 (-176.1 uncal um), Max = 36848 (-176.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:19:42.726 -07 000000569 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36839, posNoise = 9, negNoise = 4
17-03-18 02:19:42.726 -07 000000569 INF: Z Motor: After move to -0.176974, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:42.726 -07 000000569 INF: Z Motor: Settle wait time = 1447 ms, measure time = 110 ms (allowed 150 ms), total time = 1557 ms
17-03-18 02:19:42.726 -07 000000569 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:42.766 -07 000000569 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1726 ms
17-03-18 02:19:42.766 -07 000000569 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:42.766 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:42.766 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:42.766 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:42.766 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:42.766 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:19:42.766 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:42.766 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:42.766 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:19:42.766 -07 000000576 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:19:42.776 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:19:42.786 -07 000000576 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 02:19:42.786 -07 000000576 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 02:19:42.786 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:19:42.836 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:19:43.136 -07 000000467 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:19:43.136 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:19:43.136 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:19:43.136 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) start.
17-03-18 02:19:43.176 -07 000000576 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:19:43.176 -07 000000591 INF: FPGA: Recv CAMSNAP
17-03-18 02:19:43.176 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 02:19:43.266 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 591793880, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 02:19:43.266 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:43.266 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:19:43.266 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 02:19:43.276 -07 000000569 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:19:43.276 -07 000000561 INF: Autofocus start
17-03-18 02:19:43.276 -07 000000561 INF: MeasureProfile start
17-03-18 02:19:43.276 -07 000000455 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:19:43.286 -07 000000569 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:19:43.286 -07 000000569 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:19:43.286 -07 000000561 INF: MeasureProfile done
17-03-18 02:19:43.286 -07 000000561 INF: X=80  Z correction [um]=0.337546
17-03-18 02:19:43.286 -07 000000561 INF: Autofocus finished
17-03-18 02:19:43.486 -07 000000462 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:19:43.486 -07 000000569 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 02:19:43.486 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.2236328125, Z-position -0.176984903101467. ----------
17-03-18 02:19:43.496 -07 000000610 INF: Cycle	98	Tile	5	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:43.496 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37246, sync = True, waitForSettling = True)
17-03-18 02:19:43.496 -07 000000610 INF: Z Motor: Moving to -0.170501 mm, started at -0.176985 mm, distance = 6.48 um
17-03-18 02:19:43.496 -07 000000610 INF: FPGA: Xmit ZDACW 37246\n [Z Motor]
17-03-18 02:19:43.496 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 02:19:43.506 -07 000000610 INF: FPGA: 'ZDACW 37246' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:43.506 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:43.506 -07 000000502 INF: FPGA: Recv ZDACR 37246
17-03-18 02:19:43.516 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.516 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:43.666 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.666 -07 000000455 INF: FPGA: Recv ZSGSRD 35833
17-03-18 02:19:43.676 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.676 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.676 -07 000000591 INF: FPGA: Recv ZSGSRD 35829
17-03-18 02:19:43.686 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.686 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.686 -07 000000512 INF: FPGA: Recv ZSGSRD 35831
17-03-18 02:19:43.696 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.696 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.696 -07 000000444 INF: FPGA: Recv ZSGSRD 35830
17-03-18 02:19:43.706 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.706 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.706 -07 000000590 INF: FPGA: Recv ZSGSRD 35833
17-03-18 02:19:43.716 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.716 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.716 -07 000000501 INF: FPGA: Recv ZSGSRD 35833
17-03-18 02:19:43.726 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.726 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.726 -07 000000561 INF: FPGA: Recv ZSGSRD 35830
17-03-18 02:19:43.736 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.736 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.736 -07 000000502 INF: FPGA: Recv ZSGSRD 35831
17-03-18 02:19:43.746 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.746 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.746 -07 000000629 INF: FPGA: Recv ZSGSRD 35829
17-03-18 02:19:43.756 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.766 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:43.766 -07 000000569 INF: FPGA: Recv ZSGSRD 35837
17-03-18 02:19:43.776 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:43.776 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:43.776 -07 000000606 INF: FPGA: Recv ZPIEZORD 31726
17-03-18 02:19:43.786 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:43.786 -07 000000610 INF: Z Motor: Piezo is near 47.8 V (nominally 0 to 100 V), expect near 56.8 V, since DAC is at 5.683 V. Piezo Error = -9.1 V.
17-03-18 02:19:43.786 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.5 um, Read 10 ADC samples: Avg = 35832 (-169.6 uncal um), Error = 0.9 uncal um, Median = 35831 (-169.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35829 (-169.6 uncal um), Max = 35837 (-169.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:19:43.786 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35832, posNoise = 5, negNoise = 3
17-03-18 02:19:43.786 -07 000000610 INF: Z Motor: After move to -0.170501, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:43.786 -07 000000610 INF: Z Motor: MoveAbsStepped took 288 ms)
17-03-18 02:19:43.786 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:43.786 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:43.786 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:43.786 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:43.786 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:43.786 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:43.786 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:43.786 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:43.796 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:43.796 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:43.796 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:43.796 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:43.796 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 5 ms.
17-03-18 02:19:43.796 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:43.796 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 02:19:43.796 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:43.806 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 02:19:43.806 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 02:19:43.806 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 02:19:43.806 -07 000000629 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 02:19:43.826 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37423 150\n [Camera]
17-03-18 02:19:44.026 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:44.336 -07 000000579 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.975845,
17-03-18 02:19:44.416 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 588
17-03-18 02:19:44.416 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 588
17-03-18 02:19:44.416 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:44.416 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 588
17-03-18 02:19:44.416 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 588
17-03-18 02:19:44.426 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:44.426 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:44.426 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:19:44.426 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:44.426 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:19:44.606 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37423 779
17-03-18 02:19:44.756 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:44.796 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:19:44.796 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 02:19:44.796 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:44.806 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:19:44.806 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:19:44.806 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:44.806 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:44.806 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:19:44.806 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:44.816 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:19:44.946 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:44.946 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:44.946 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:44.946 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:44.946 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:44.956 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:44.956 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:44.956 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:19:44.956 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:44.956 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 02:19:45.136 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:19:45.136 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:45.136 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37423 150' command took 2 ms to send, 1308 ms to get response, and 1328 ms overall
17-03-18 02:19:45.136 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.170629
17-03-18 02:19:45.146 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.17063 mm
17-03-18 02:19:45.146 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:45.146 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 02:19:45.146 -07 000000455 INF: Y Motor: Moving to 64.0626 mm, started at 63.2236 mm, delta = 0.8390 mm
17-03-18 02:19:45.146 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:45.146 -07 000000424 INF: Z Motor: Entering MoveAbsStepped (DAC = 37274, sync = True, waitForSettling = False)
17-03-18 02:19:45.146 -07 000000424 INF: Z Motor: Moving to -0.170629 mm, started at -0.170516 mm, distance = -0.11 um
17-03-18 02:19:45.146 -07 000000618 INF: FPGA: Recv YRDPOS 129482
17-03-18 02:19:45.156 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:19:45.156 -07 000000455 INF: Y Motor: Encoder = 129482 = motor step 101157.8 = 63.2236 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:45.156 -07 000000455 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:45.156 -07 000000455 INF: Y Motor: Moving 1342 steps-19
17-03-18 02:19:45.156 -07 000000424 INF: FPGA: Xmit ZDACW 37274\n [Z Motor]
17-03-18 02:19:45.156 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 02:19:45.166 -07 000000424 INF: FPGA: 'ZDACW 37274' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:19:45.166 -07 000000424 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:45.166 -07 000000606 INF: FPGA: Recv ZDACR 37274
17-03-18 02:19:45.176 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:45.176 -07 000000424 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:45.176 -07 000000424 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 02:19:45.326 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:19:45.326 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 02:19:45.326 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:45.336 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:19:45.336 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:19:45.336 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 02:19:45.336 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:45.336 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:45.336 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 02:19:45.346 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 02:19:45.546 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 02:19:45.546 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:19:45.596 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:45.596 -07 000000606 INF: FPGA: Recv YRDPOS 131187
17-03-18 02:19:45.606 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:45.606 -07 000000455 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:45.606 -07 000000455 INF: Y Motor: Position error before settling (table move) = -13 encoder counts (-0.006 mm)
17-03-18 02:19:45.606 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.108 mm/sec
17-03-18 02:19:46.466 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:46.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:46.556 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:46.556 -07 000000561 INF: FPGA: Recv YRDPOS 131187
17-03-18 02:19:46.566 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:46.566 -07 000000455 INF: Y Motor: Encoder = 131187 = motor step 102489.8 = 64.0562 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:46.586 -07 000000455 INF: Y Motor: After move to 64.062607, error = -0.006454, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:46.586 -07 000000455 INF: Y Motor: Position error after settling (table move) = -13 encoder counts (-0.006 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:46.586 -07 000000455 INF: Y Motor: Moved to 64.0562 after 1444 ms (table move)
17-03-18 02:19:46.586 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170629 mm (DAC = 37274)
17-03-18 02:19:46.586 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.596 -07 000000618 INF: FPGA: Recv ZSGSRD 35856
17-03-18 02:19:46.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:46.606 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.606 -07 000000569 INF: FPGA: Recv ZSGSRD 35853
17-03-18 02:19:46.616 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.616 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.616 -07 000000430 INF: FPGA: Recv ZSGSRD 35843
17-03-18 02:19:46.626 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.626 -07 000000590 INF: FPGA: Recv ZSGSRD 35854
17-03-18 02:19:46.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.636 -07 000000444 INF: FPGA: Recv ZSGSRD 35853
17-03-18 02:19:46.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.646 -07 000000467 INF: FPGA: Recv ZSGSRD 35847
17-03-18 02:19:46.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.656 -07 000000462 INF: FPGA: Recv ZSGSRD 35855
17-03-18 02:19:46.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.666 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.666 -07 000000501 INF: FPGA: Recv ZSGSRD 35851
17-03-18 02:19:46.676 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.676 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.676 -07 000000618 INF: FPGA: Recv ZSGSRD 35852
17-03-18 02:19:46.686 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.686 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.686 -07 000000569 INF: FPGA: Recv ZSGSRD 35851
17-03-18 02:19:46.696 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.696 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:46.696 -07 000000606 INF: FPGA: Recv ZPIEZORD 31766
17-03-18 02:19:46.706 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.706 -07 000000610 INF: Z Motor: Piezo is near 47.9 V (nominally 0 to 100 V), expect near 56.9 V, since DAC is at 5.688 V. Piezo Error = -9.0 V.
17-03-18 02:19:46.706 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.6 um, Read 10 ADC samples: Avg = 35852 (-169.8 uncal um), Error = 0.9 uncal um, Median = 35852 (-169.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35843 (-169.7 uncal um), Max = 35856 (-169.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 02:19:46.706 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35852, posNoise = 4, negNoise = 9
17-03-18 02:19:46.706 -07 000000610 INF: Z Motor: After move to -0.170629, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:46.706 -07 000000610 INF: Z Motor: Settle wait time = 1446 ms, measure time = 111 ms (allowed 150 ms), total time = 1557 ms
17-03-18 02:19:46.706 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:46.746 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-18 02:19:46.746 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:46.746 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05615234375, Z-position -0.170644205717549. ----------
17-03-18 02:19:46.746 -07 000000610 INF: Cycle	98	Tile	6	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:46.746 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 37097, sync = True, waitForSettling = True)
17-03-18 02:19:46.746 -07 000000610 INF: Z Motor: Moving to -0.169819 mm, started at -0.170644 mm, distance = 0.83 um
17-03-18 02:19:46.746 -07 000000610 INF: FPGA: Xmit ZDACW 37097\n [Z Motor]
17-03-18 02:19:46.746 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 02:19:46.756 -07 000000610 INF: FPGA: 'ZDACW 37097' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:19:46.756 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:46.756 -07 000000455 INF: FPGA: Recv ZDACR 37097
17-03-18 02:19:46.766 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.766 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:46.916 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.916 -07 000000561 INF: FPGA: Recv ZSGSRD 35721
17-03-18 02:19:46.926 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:46.926 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.926 -07 000000576 INF: FPGA: Recv ZSGSRD 35720
17-03-18 02:19:46.936 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.936 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.936 -07 000000462 INF: FPGA: Recv ZSGSRD 35720
17-03-18 02:19:46.946 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.946 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.946 -07 000000444 INF: FPGA: Recv ZSGSRD 35726
17-03-18 02:19:46.956 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.956 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.956 -07 000000430 INF: FPGA: Recv ZSGSRD 35727
17-03-18 02:19:46.966 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.966 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.966 -07 000000561 INF: FPGA: Recv ZSGSRD 35724
17-03-18 02:19:46.976 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.976 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.976 -07 000000512 INF: FPGA: Recv ZSGSRD 35722
17-03-18 02:19:46.986 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.986 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.986 -07 000000462 INF: FPGA: Recv ZSGSRD 35722
17-03-18 02:19:46.996 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:46.996 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:46.996 -07 000000569 INF: FPGA: Recv ZSGSRD 35731
17-03-18 02:19:47.006 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:47.006 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:47.006 -07 000000606 INF: FPGA: Recv ZSGSRD 35724
17-03-18 02:19:47.016 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:47.016 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:47.016 -07 000000561 INF: FPGA: Recv ZPIEZORD 31576
17-03-18 02:19:47.026 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:47.026 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.661 V. Piezo Error = -9.2 V.
17-03-18 02:19:47.026 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.8 um, Read 10 ADC samples: Avg = 35724 (-168.9 uncal um), Error = 0.9 uncal um, Median = 35723 (-168.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35720 (-168.9 uncal um), Max = 35731 (-169.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:19:47.026 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35724, posNoise = 7, negNoise = 4
17-03-18 02:19:47.026 -07 000000610 INF: Z Motor: After move to -0.169819, error = -0.000003, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:47.026 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:19:47.026 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:47.026 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:47.026 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:47.026 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:47.026 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:47.026 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:47.026 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:47.026 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:47.026 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:47.026 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:47.026 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:47.026 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:47.036 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:19:47.036 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:47.036 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:19:47.036 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:47.046 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 02:19:47.046 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 02:19:47.046 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:19:47.046 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:19:47.046 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37274 150\n [Camera]
17-03-18 02:19:47.246 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:47.646 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:47.646 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:47.646 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:47.646 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:47.646 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 02:19:47.646 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:47.646 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:47.646 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:47.776 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:47.776 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:19:47.836 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37274 779
17-03-18 02:19:47.986 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:48.026 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 02:19:48.026 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 02:19:48.026 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:48.036 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:48.036 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:19:48.146 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 02:19:48.146 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 02:19:48.146 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:48.146 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:48.156 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 504 ms.
17-03-18 02:19:48.176 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:48.176 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:48.176 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:48.176 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:48.176 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:48.176 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:48.186 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:48.186 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:19:48.186 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:48.186 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:19:48.366 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:19:48.366 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:48.366 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37274 150' command took 4 ms to send, 1307 ms to get response, and 1319 ms overall
17-03-18 02:19:48.366 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.170173
17-03-18 02:19:48.366 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.17017 mm
17-03-18 02:19:48.366 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:48.376 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 02:19:48.376 -07 000000629 INF: Y Motor: Moving to 64.8926 mm, started at 64.0562 mm, delta = 0.8365 mm
17-03-18 02:19:48.376 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:48.376 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 37174, sync = True, waitForSettling = False)
17-03-18 02:19:48.376 -07 000000512 INF: Z Motor: Moving to -0.170172 mm, started at -0.169822 mm, distance = -0.35 um
17-03-18 02:19:48.376 -07 000000579 INF: FPGA: Recv YRDPOS 131188
17-03-18 02:19:48.386 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:48.386 -07 000000629 INF: Y Motor: Encoder = 131188 = motor step 102490.6 = 64.0566 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:48.386 -07 000000512 INF: FPGA: Xmit ZDACW 37174\n [Z Motor]
17-03-18 02:19:48.386 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 02:19:48.386 -07 000000629 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:48.386 -07 000000629 INF: Y Motor: Moving 1338 steps-13
17-03-18 02:19:48.396 -07 000000512 INF: FPGA: 'ZDACW 37174' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:19:48.396 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:48.406 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:48.406 -07 000000561 INF: FPGA: Recv ZDACR 37174
17-03-18 02:19:48.416 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:48.416 -07 000000512 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 02:19:48.556 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 02:19:48.566 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 02:19:48.566 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:48.566 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 02:19:48.566 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 02:19:48.566 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:48.566 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:48.566 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 02:19:48.566 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:48.576 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:19:48.766 -07 000000430 INF: FPGA: Recv YMVTILE
17-03-18 02:19:48.766 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 381 ms overall
17-03-18 02:19:48.816 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:48.816 -07 000000467 INF: FPGA: Recv YRDPOS 132871
17-03-18 02:19:48.826 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:19:48.826 -07 000000629 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:48.826 -07 000000629 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 02:19:48.826 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 381 ms, distance = 0.836 mm, average velocity = 2.195 mm/sec
17-03-18 02:19:49.696 -07 000000467 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.997626,
17-03-18 02:19:49.776 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:49.776 -07 000000576 INF: FPGA: Recv YRDPOS 132871
17-03-18 02:19:49.786 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:49.786 -07 000000629 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:49.806 -07 000000629 INF: Y Motor: After move to 64.892609, error = -0.014191, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:49.806 -07 000000629 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:49.806 -07 000000629 INF: Y Motor: Moved to 64.8784 after 1435 ms (table move)
17-03-18 02:19:49.816 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.170172 mm (DAC = 37174)
17-03-18 02:19:49.816 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.816 -07 000000579 INF: FPGA: Recv ZSGSRD 35781
17-03-18 02:19:49.826 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.826 -07 000000626 INF: FPGA: Recv ZSGSRD 35778
17-03-18 02:19:49.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.836 -07 000000461 INF: FPGA: Recv ZSGSRD 35789
17-03-18 02:19:49.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.846 -07 000000462 INF: FPGA: Recv ZSGSRD 35779
17-03-18 02:19:49.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.856 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.856 -07 000000606 INF: FPGA: Recv ZSGSRD 35785
17-03-18 02:19:49.866 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.866 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.866 -07 000000591 INF: FPGA: Recv ZSGSRD 35778
17-03-18 02:19:49.876 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.876 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.876 -07 000000618 INF: FPGA: Recv ZSGSRD 35774
17-03-18 02:19:49.886 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.886 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.886 -07 000000501 INF: FPGA: Recv ZSGSRD 35776
17-03-18 02:19:49.896 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.896 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.896 -07 000000462 INF: FPGA: Recv ZSGSRD 35773
17-03-18 02:19:49.906 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.906 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:49.906 -07 000000430 INF: FPGA: Recv ZSGSRD 35788
17-03-18 02:19:49.916 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.916 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:49.916 -07 000000579 INF: FPGA: Recv ZPIEZORD 31635
17-03-18 02:19:49.926 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.926 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.7 V, since DAC is at 5.672 V. Piezo Error = -9.1 V.
17-03-18 02:19:49.926 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -170.2 um, Read 10 ADC samples: Avg = 35780 (-169.3 uncal um), Error = 0.9 uncal um, Median = 35778 (-169.3 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35773 (-169.3 uncal um), Max = 35789 (-169.4 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:19:49.926 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35780, posNoise = 9, negNoise = 7
17-03-18 02:19:49.926 -07 000000610 INF: Z Motor: After move to -0.170172, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:49.926 -07 000000610 INF: Z Motor: Settle wait time = 1437 ms, measure time = 110 ms (allowed 150 ms), total time = 1547 ms
17-03-18 02:19:49.926 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:49.966 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1590 ms
17-03-18 02:19:49.966 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:49.966 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87841796875, Z-position -0.170181662443342. ----------
17-03-18 02:19:49.966 -07 000000610 INF: Cycle	98	Tile	7	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:49.966 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36998, sync = True, waitForSettling = True)
17-03-18 02:19:49.966 -07 000000610 INF: Z Motor: Moving to -0.169366 mm, started at -0.170182 mm, distance = 0.82 um
17-03-18 02:19:49.966 -07 000000610 INF: FPGA: Xmit ZDACW 36998\n [Z Motor]
17-03-18 02:19:49.966 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 02:19:49.976 -07 000000610 INF: FPGA: 'ZDACW 36998' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:19:49.976 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:49.976 -07 000000502 INF: FPGA: Recv ZDACR 36998
17-03-18 02:19:49.986 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:49.986 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:50.136 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.136 -07 000000591 INF: FPGA: Recv ZSGSRD 35653
17-03-18 02:19:50.146 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.146 -07 000000629 INF: FPGA: Recv ZSGSRD 35656
17-03-18 02:19:50.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.156 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.156 -07 000000512 INF: FPGA: Recv ZSGSRD 35660
17-03-18 02:19:50.166 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.166 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.166 -07 000000561 INF: FPGA: Recv ZSGSRD 35654
17-03-18 02:19:50.176 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.176 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.176 -07 000000606 INF: FPGA: Recv ZSGSRD 35656
17-03-18 02:19:50.186 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.186 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.186 -07 000000444 INF: FPGA: Recv ZSGSRD 35658
17-03-18 02:19:50.196 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.196 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.196 -07 000000502 INF: FPGA: Recv ZSGSRD 35652
17-03-18 02:19:50.206 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.206 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.206 -07 000000569 INF: FPGA: Recv ZSGSRD 35652
17-03-18 02:19:50.216 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.216 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.216 -07 000000618 INF: FPGA: Recv ZSGSRD 35650
17-03-18 02:19:50.226 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.226 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:50.226 -07 000000467 INF: FPGA: Recv ZSGSRD 35649
17-03-18 02:19:50.236 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.236 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:50.236 -07 000000591 INF: FPGA: Recv ZPIEZORD 31479
17-03-18 02:19:50.246 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:50.246 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.5 V, since DAC is at 5.646 V. Piezo Error = -9.2 V.
17-03-18 02:19:50.246 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.4 um, Read 10 ADC samples: Avg = 35654 (-168.5 uncal um), Error = 0.9 uncal um, Median = 35654 (-168.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35649 (-168.5 uncal um), Max = 35660 (-168.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:19:50.246 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35654, posNoise = 6, negNoise = 5
17-03-18 02:19:50.246 -07 000000610 INF: Z Motor: After move to -0.169366, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:50.246 -07 000000610 INF: Z Motor: MoveAbsStepped took 275 ms)
17-03-18 02:19:50.246 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:50.246 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:50.246 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:50.246 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:50.246 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:50.246 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:50.246 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:50.246 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:50.246 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:50.246 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:50.246 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:50.246 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:50.256 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:19:50.256 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:50.256 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:19:50.256 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:50.266 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:19:50.266 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:19:50.266 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 02:19:50.266 -07 000000626 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:19:50.266 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37174 150\n [Camera]
17-03-18 02:19:50.466 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:50.866 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:50.866 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:50.866 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:50.866 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:50.866 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 02:19:50.866 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:50.866 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:50.866 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:50.866 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:50.866 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 02:19:51.056 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37174 779
17-03-18 02:19:51.206 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:51.246 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:19:51.246 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 02:19:51.246 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:51.246 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 02:19:51.246 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 02:19:51.246 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:51.246 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:51.246 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 02:19:51.246 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:51.256 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 02:19:51.396 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:51.396 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:51.396 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:51.396 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:51.396 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 02:19:51.396 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:51.396 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:51.396 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:51.526 -07 000000512 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:51.526 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:51.536 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:51.536 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:19:51.586 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:19:51.586 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:51.586 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37174 150' command took 2 ms to send, 1306 ms to get response, and 1317 ms overall
17-03-18 02:19:51.586 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.169924
17-03-18 02:19:51.586 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.16992 mm
17-03-18 02:19:51.586 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:51.596 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 02:19:51.596 -07 000000512 INF: Y Motor: Moving to 65.7226 mm, started at 64.8784 mm, delta = 0.8442 mm
17-03-18 02:19:51.596 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 37120, sync = True, waitForSettling = False)
17-03-18 02:19:51.596 -07 000000618 INF: Z Motor: Moving to -0.169924 mm, started at -0.169372 mm, distance = -0.55 um
17-03-18 02:19:51.596 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:51.596 -07 000000467 INF: FPGA: Recv YRDPOS 132871
17-03-18 02:19:51.606 -07 000000512 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:51.606 -07 000000618 INF: FPGA: Xmit ZDACW 37120\n [Z Motor]
17-03-18 02:19:51.606 -07 000000512 INF: Y Motor: Encoder = 132871 = motor step 103805.5 = 64.8784 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:51.606 -07 000000512 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:51.606 -07 000000512 INF: Y Motor: Moving 1351 steps-29
17-03-18 02:19:51.606 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 02:19:51.616 -07 000000618 INF: FPGA: 'ZDACW 37120' command took 0 ms to send, 0 ms to get response, and 17 ms overall
17-03-18 02:19:51.616 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:51.616 -07 000000569 INF: FPGA: Recv ZDACR 37120
17-03-18 02:19:51.626 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:51.626 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:51.626 -07 000000618 INF: Z Motor: MoveAbsStepped took 27 ms (did NOT wait for settling yet))
17-03-18 02:19:51.786 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 02:19:51.786 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:19:51.786 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:51.786 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:51.786 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 02:19:51.916 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 02:19:51.916 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 02:19:51.916 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:51.916 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:51.926 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 522 ms.
17-03-18 02:19:52.006 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 02:19:52.006 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 400 ms overall
17-03-18 02:19:52.056 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:52.066 -07 000000444 INF: FPGA: Recv YRDPOS 134581
17-03-18 02:19:52.066 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 02:19:52.066 -07 000000512 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:52.066 -07 000000512 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 02:19:52.066 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.844 mm, average velocity = 2.110 mm/sec
17-03-18 02:19:53.016 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:53.016 -07 000000501 INF: FPGA: Recv YRDPOS 134581
17-03-18 02:19:53.026 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:53.026 -07 000000512 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:53.056 -07 000000512 INF: Y Motor: After move to 65.722610, error = -0.009232, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:53.056 -07 000000512 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:53.056 -07 000000512 INF: Y Motor: Moved to 65.7134 after 1460 ms (table move)
17-03-18 02:19:53.056 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169924 mm (DAC = 37120)
17-03-18 02:19:53.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.066 -07 000000430 INF: FPGA: Recv ZSGSRD 35751
17-03-18 02:19:53.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 02:19:53.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.066 -07 000000424 INF: FPGA: Recv ZSGSRD 35737
17-03-18 02:19:53.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.076 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.076 -07 000000606 INF: FPGA: Recv ZSGSRD 35733
17-03-18 02:19:53.086 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.086 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.086 -07 000000629 INF: FPGA: Recv ZSGSRD 35742
17-03-18 02:19:53.096 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.096 -07 000000591 INF: FPGA: Recv ZSGSRD 35746
17-03-18 02:19:53.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.106 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.106 -07 000000569 INF: FPGA: Recv ZSGSRD 35745
17-03-18 02:19:53.116 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.116 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.116 -07 000000579 INF: FPGA: Recv ZSGSRD 35735
17-03-18 02:19:53.126 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.126 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.126 -07 000000606 INF: FPGA: Recv ZSGSRD 35736
17-03-18 02:19:53.136 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.136 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.136 -07 000000461 INF: FPGA: Recv ZSGSRD 35742
17-03-18 02:19:53.146 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.146 -07 000000502 INF: FPGA: Recv ZSGSRD 35740
17-03-18 02:19:53.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.156 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:53.156 -07 000000430 INF: FPGA: Recv ZPIEZORD 31632
17-03-18 02:19:53.166 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.166 -07 000000610 INF: Z Motor: Piezo is near 47.6 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.664 V. Piezo Error = -9.1 V.
17-03-18 02:19:53.166 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.9 um, Read 10 ADC samples: Avg = 35741 (-169.1 uncal um), Error = 0.9 uncal um, Median = 35741 (-169.1 uncal um), StdDev = 6 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 35733 (-169.0 uncal um), Max = 35751 (-169.1 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:19:53.166 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35741, posNoise = 10, negNoise = 8
17-03-18 02:19:53.166 -07 000000610 INF: Z Motor: After move to -0.169924, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:53.166 -07 000000610 INF: Z Motor: Settle wait time = 1464 ms, measure time = 103 ms (allowed 150 ms), total time = 1567 ms
17-03-18 02:19:53.166 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:53.216 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1620 ms
17-03-18 02:19:53.216 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:53.216 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71337890625, Z-position -0.169931118169813. ----------
17-03-18 02:19:53.216 -07 000000610 INF: Cycle	98	Tile	8	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:53.216 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36943, sync = True, waitForSettling = True)
17-03-18 02:19:53.216 -07 000000610 INF: Z Motor: Moving to -0.169114 mm, started at -0.169931 mm, distance = 0.82 um
17-03-18 02:19:53.216 -07 000000610 INF: FPGA: Xmit ZDACW 36943\n [Z Motor]
17-03-18 02:19:53.216 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 02:19:53.226 -07 000000610 INF: FPGA: 'ZDACW 36943' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:19:53.226 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:53.226 -07 000000462 INF: FPGA: Recv ZDACR 36943
17-03-18 02:19:53.236 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.236 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:53.386 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.386 -07 000000626 INF: FPGA: Recv ZSGSRD 35619
17-03-18 02:19:53.396 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:53.396 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.396 -07 000000501 INF: FPGA: Recv ZSGSRD 35614
17-03-18 02:19:53.406 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.406 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.406 -07 000000430 INF: FPGA: Recv ZSGSRD 35616
17-03-18 02:19:53.416 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.416 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.416 -07 000000512 INF: FPGA: Recv ZSGSRD 35617
17-03-18 02:19:53.426 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.426 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.426 -07 000000576 INF: FPGA: Recv ZSGSRD 35614
17-03-18 02:19:53.436 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.436 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.436 -07 000000626 INF: FPGA: Recv ZSGSRD 35620
17-03-18 02:19:53.446 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.446 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.446 -07 000000461 INF: FPGA: Recv ZSGSRD 35616
17-03-18 02:19:53.456 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.456 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.456 -07 000000424 INF: FPGA: Recv ZSGSRD 35617
17-03-18 02:19:53.466 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.466 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.466 -07 000000590 INF: FPGA: Recv ZSGSRD 35619
17-03-18 02:19:53.476 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.476 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:53.476 -07 000000579 INF: FPGA: Recv ZSGSRD 35613
17-03-18 02:19:53.486 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.486 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:53.486 -07 000000629 INF: FPGA: Recv ZPIEZORD 31465
17-03-18 02:19:53.496 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:53.496 -07 000000610 INF: Z Motor: Piezo is near 47.2 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.637 V. Piezo Error = -9.2 V.
17-03-18 02:19:53.496 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35616 (-168.3 uncal um), Error = 0.9 uncal um, Median = 35616 (-168.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35613 (-168.2 uncal um), Max = 35620 (-168.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:19:53.496 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35616, posNoise = 4, negNoise = 3
17-03-18 02:19:53.496 -07 000000610 INF: Z Motor: After move to -0.169114, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:53.496 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:19:53.496 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:53.496 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:53.496 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:53.496 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:53.496 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:53.496 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:53.496 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:53.496 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:53.496 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:53.496 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:53.496 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 02:19:53.496 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:53.506 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:19:53.506 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:53.506 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 02:19:53.506 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:53.516 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 02:19:53.516 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:19:53.516 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 02:19:53.516 -07 000000579 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:19:53.516 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37120 150\n [Camera]
17-03-18 02:19:53.726 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:54.116 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:54.116 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:54.116 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:54.126 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:54.126 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:54.126 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:54.126 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:54.126 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:19:54.126 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:54.126 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:19:54.306 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37120 779
17-03-18 02:19:54.456 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:54.496 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 373 ms.
17-03-18 02:19:54.496 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 02:19:54.496 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:54.496 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:19:54.496 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 02:19:54.496 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:54.506 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:19:54.506 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 02:19:54.506 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:19:54.516 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 02:19:54.646 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:54.646 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:54.646 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:54.646 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:54.646 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:19:54.646 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:54.646 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:54.656 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:54.656 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:54.656 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:19:54.836 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:19:54.836 -07 000000501 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:54.836 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37120 150' command took 2 ms to send, 1308 ms to get response, and 1320 ms overall
17-03-18 02:19:54.846 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 02:19:54.846 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71337890625, Z-Position -0.169128091652093. ------
17-03-18 02:19:54.846 -07 000000576 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.17565 mm
17-03-18 02:19:54.846 -07 000000576 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:54.846 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:19:54.846 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 02:19:54.846 -07 000000455 INF: Y Motor: Moving to 66.5526 mm, started at 65.7134 mm, delta = 0.8392 mm
17-03-18 02:19:54.846 -07 000000462 INF: Z Motor: Entering MoveAbsStepped (DAC = 38371, sync = True, waitForSettling = False)
17-03-18 02:19:54.846 -07 000000462 INF: Z Motor: Moving to -0.175651 mm, started at -0.169128 mm, distance = -6.52 um
17-03-18 02:19:54.846 -07 000000629 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:19:54.856 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:19:54.856 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:54.856 -07 000000561 INF: FPGA: Recv YRDPOS 134581
17-03-18 02:19:54.866 -07 000000455 INF: FPGA: 'YRDPOS' command took 2 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 02:19:54.866 -07 000000455 INF: Y Motor: Encoder = 134581 = motor step 105141.4 = 65.7134 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:54.866 -07 000000455 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:54.866 -07 000000455 INF: Y Motor: Moving 1343 steps-19
17-03-18 02:19:54.866 -07 000000467 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:19:54.876 -07 000000462 INF: FPGA: Xmit ZDACW 38371\n [Z Motor]
17-03-18 02:19:54.876 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 02:19:54.886 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:54.886 -07 000000462 INF: FPGA: 'ZDACW 38371' command took 0 ms to send, 0 ms to get response, and 32 ms overall
17-03-18 02:19:54.896 -07 000000462 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:54.896 -07 000000579 INF: FPGA: Recv ZDACR 38371
17-03-18 02:19:54.906 -07 000000462 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:54.906 -07 000000462 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-18 02:19:55.036 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 02:19:55.036 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 02:19:55.036 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:55.036 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:55.036 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 02:19:55.036 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:19:55.036 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:55.036 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:55.036 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 02:19:55.046 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 02:19:55.056 -07 000000501 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.963579,
17-03-18 02:19:55.066 -07 000000606 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:19:55.066 -07 000000467 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 194 ms to get response, and 211 ms overall
17-03-18 02:19:55.256 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 02:19:55.256 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:19:55.306 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:55.306 -07 000000561 INF: FPGA: Recv YRDPOS 136270
17-03-18 02:19:55.316 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:19:55.316 -07 000000455 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:55.316 -07 000000455 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 02:19:55.316 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.109 mm/sec
17-03-18 02:19:56.266 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:56.266 -07 000000579 INF: FPGA: Recv YRDPOS 136270
17-03-18 02:19:56.276 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.276 -07 000000455 INF: Y Motor: Encoder = 136270 = motor step 106460.9 = 66.5381 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:56.296 -07 000000455 INF: Y Motor: After move to 66.552605, error = -0.014519, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:19:56.296 -07 000000455 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:19:56.296 -07 000000455 INF: Y Motor: Moved to 66.5381 after 1452 ms (table move)
17-03-18 02:19:56.306 -07 000000576 INF: Z Motor: EndOfMoveAbsStepped: target = -0.175651 mm (DAC = 38371)
17-03-18 02:19:56.306 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.306 -07 000000626 INF: FPGA: Recv ZSGSRD 36633
17-03-18 02:19:56.316 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:19:56.316 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.316 -07 000000467 INF: FPGA: Recv ZSGSRD 36636
17-03-18 02:19:56.326 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.326 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.326 -07 000000618 INF: FPGA: Recv ZSGSRD 36636
17-03-18 02:19:56.336 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.336 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.336 -07 000000591 INF: FPGA: Recv ZSGSRD 36636
17-03-18 02:19:56.346 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.346 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.346 -07 000000606 INF: FPGA: Recv ZSGSRD 36632
17-03-18 02:19:56.356 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.356 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.356 -07 000000461 INF: FPGA: Recv ZSGSRD 36630
17-03-18 02:19:56.366 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.366 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.366 -07 000000629 INF: FPGA: Recv ZSGSRD 36632
17-03-18 02:19:56.376 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.376 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.376 -07 000000618 INF: FPGA: Recv ZSGSRD 36630
17-03-18 02:19:56.386 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.386 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.386 -07 000000512 INF: FPGA: Recv ZSGSRD 36632
17-03-18 02:19:56.396 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.396 -07 000000576 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:56.396 -07 000000561 INF: FPGA: Recv ZSGSRD 36637
17-03-18 02:19:56.406 -07 000000576 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.406 -07 000000576 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:56.406 -07 000000569 INF: FPGA: Recv ZPIEZORD 32815
17-03-18 02:19:56.416 -07 000000576 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:56.416 -07 000000576 INF: Z Motor: Piezo is near 50.1 V (nominally 0 to 100 V), expect near 58.6 V, since DAC is at 5.855 V. Piezo Error = -8.4 V.
17-03-18 02:19:56.416 -07 000000576 INF: Z Motor: ReadAdcAverage: Commanded Z = -175.7 um, Read 10 ADC samples: Avg = 36633 (-174.8 uncal um), Error = 0.9 uncal um, Median = 36632 (-174.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 36630 (-174.8 uncal um), Max = 36637 (-174.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:19:56.416 -07 000000576 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36633, posNoise = 4, negNoise = 3
17-03-18 02:19:56.416 -07 000000576 INF: Z Motor: After move to -0.175651, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:56.416 -07 000000576 INF: Z Motor: Settle wait time = 1455 ms, measure time = 109 ms (allowed 150 ms), total time = 1564 ms
17-03-18 02:19:56.416 -07 000000576 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 02:19:56.466 -07 000000576 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms
17-03-18 02:19:56.466 -07 000000576 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:19:56.466 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:56.466 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:56.466 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:56.466 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:56.466 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:19:56.466 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:56.466 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:56.466 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:19:56.466 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:19:56.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:19:56.476 -07 000000461 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:19:56.476 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:19:56.486 -07 000000461 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 02:19:56.486 -07 000000461 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 02:19:56.486 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:19:56.536 -07 000000502 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:19:56.836 -07 000000576 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:19:56.836 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:19:56.836 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:19:56.836 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) start.
17-03-18 02:19:56.876 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:19:56.876 -07 000000430 INF: FPGA: Recv CAMSNAP
17-03-18 02:19:56.876 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 02:19:56.966 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 02:19:56.966 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:56.966 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:19:56.966 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 02:19:56.976 -07 000000455 INF: Autofocus start
17-03-18 02:19:56.976 -07 000000455 INF: MeasureProfile start
17-03-18 02:19:56.976 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:19:56.976 -07 000000626 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:19:56.986 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:19:56.986 -07 000000444 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:19:56.986 -07 000000455 INF: MeasureProfile done
17-03-18 02:19:56.986 -07 000000455 INF: X=0  Z correction [um]=-0.0713522
17-03-18 02:19:56.986 -07 000000455 INF: Autofocus finished
17-03-18 02:19:57.186 -07 000000461 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:19:57.186 -07 000000444 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:19:57.186 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5380859375, Z-position -0.175661515400264. ----------
17-03-18 02:19:57.186 -07 000000610 INF: Cycle	98	Tile	9	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:19:57.186 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36868, sync = True, waitForSettling = True)
17-03-18 02:19:57.196 -07 000000610 INF: Z Motor: Moving to -0.168771 mm, started at -0.175662 mm, distance = 6.89 um
17-03-18 02:19:57.196 -07 000000610 INF: FPGA: Xmit ZDACW 36868\n [Z Motor]
17-03-18 02:19:57.196 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 02:19:57.206 -07 000000610 INF: FPGA: 'ZDACW 36868' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:57.206 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:57.206 -07 000000626 INF: FPGA: Recv ZDACR 36868
17-03-18 02:19:57.216 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.216 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:19:57.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.366 -07 000000462 INF: FPGA: Recv ZSGSRD 35566
17-03-18 02:19:57.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:19:57.376 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.376 -07 000000502 INF: FPGA: Recv ZSGSRD 35565
17-03-18 02:19:57.386 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.386 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.386 -07 000000561 INF: FPGA: Recv ZSGSRD 35561
17-03-18 02:19:57.396 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.396 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.396 -07 000000455 INF: FPGA: Recv ZSGSRD 35563
17-03-18 02:19:57.406 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.406 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.406 -07 000000629 INF: FPGA: Recv ZSGSRD 35556
17-03-18 02:19:57.416 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.416 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.416 -07 000000579 INF: FPGA: Recv ZSGSRD 35566
17-03-18 02:19:57.426 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.426 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.426 -07 000000606 INF: FPGA: Recv ZSGSRD 35566
17-03-18 02:19:57.436 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.436 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.436 -07 000000626 INF: FPGA: Recv ZSGSRD 35558
17-03-18 02:19:57.446 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.446 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.446 -07 000000455 INF: FPGA: Recv ZSGSRD 35557
17-03-18 02:19:57.456 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.456 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:19:57.456 -07 000000569 INF: FPGA: Recv ZSGSRD 35558
17-03-18 02:19:57.466 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.466 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:19:57.466 -07 000000462 INF: FPGA: Recv ZPIEZORD 31411
17-03-18 02:19:57.476 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:19:57.476 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.626 V. Piezo Error = -9.2 V.
17-03-18 02:19:57.476 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35562 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35562 (-167.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35556 (-167.9 uncal um), Max = 35566 (-167.9 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:19:57.476 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35562, posNoise = 4, negNoise = 6
17-03-18 02:19:57.476 -07 000000610 INF: Z Motor: After move to -0.168771, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:19:57.476 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 02:19:57.476 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:19:57.476 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:19:57.476 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:19:57.476 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:19:57.476 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:19:57.476 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:19:57.476 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:19:57.476 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:19:57.476 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:19:57.476 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:19:57.476 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:19:57.476 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:19:57.486 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 02:19:57.486 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:19:57.486 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:19:57.486 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:19:57.496 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:19:57.496 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 02:19:57.496 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:19:57.496 -07 000000430 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 02:19:57.496 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37044 150\n [Camera]
17-03-18 02:19:57.696 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:19:58.096 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:19:58.096 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:19:58.096 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:58.096 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:58.096 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 02:19:58.096 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:19:58.096 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:19:58.096 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:58.226 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:58.226 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 02:19:58.286 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37044 779
17-03-18 02:19:58.436 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:19:58.476 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 02:19:58.476 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 02:19:58.476 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:58.486 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:58.486 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:19:58.586 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 365 ms.
17-03-18 02:19:58.586 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 365 ms.
17-03-18 02:19:58.586 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:58.596 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:58.596 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 498 ms.
17-03-18 02:19:58.626 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:19:58.626 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:19:58.626 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:19:58.636 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:19:58.636 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:19:58.636 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:19:58.636 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:19:58.636 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:19:58.636 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:19:58.636 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:19:58.826 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1314
17-03-18 02:19:58.826 -07 000000424 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:19:58.826 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37044 150' command took 2 ms to send, 1311 ms to get response, and 1321 ms overall
17-03-18 02:19:58.826 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.169662
17-03-18 02:19:58.826 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.16966 mm
17-03-18 02:19:58.826 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:19:58.826 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 02:19:58.826 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37063, sync = True, waitForSettling = False)
17-03-18 02:19:58.826 -07 000000626 INF: Z Motor: Moving to -0.169664 mm, started at -0.168781 mm, distance = -0.88 um
17-03-18 02:19:58.826 -07 000000626 INF: FPGA: Xmit ZDACW 37063\n [Z Motor]
17-03-18 02:19:58.826 -07 000000462 INF: Y Motor: Moving to 67.3826 mm, started at 66.5381 mm, delta = 0.8445 mm
17-03-18 02:19:58.826 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 02:19:58.836 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:58.836 -07 000000626 INF: FPGA: 'ZDACW 37063' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:19:58.836 -07 000000569 INF: FPGA: Recv YRDPOS 136271
17-03-18 02:19:58.846 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 02:19:58.846 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:19:58.846 -07 000000462 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:58.846 -07 000000444 INF: FPGA: Recv ZDACR 37063
17-03-18 02:19:58.846 -07 000000462 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:19:58.846 -07 000000462 INF: Y Motor: Moving 1350 steps-30
17-03-18 02:19:58.856 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:19:58.856 -07 000000626 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 02:19:58.856 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:19:59.016 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 02:19:59.016 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 02:19:59.016 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:59.016 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:19:59.016 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 02:19:59.016 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:19:59.016 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:19:59.026 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 02:19:59.026 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 02:19:59.026 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:19:59.226 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 02:19:59.226 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 02:19:59.276 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:19:59.276 -07 000000590 INF: FPGA: Recv YRDPOS 137976
17-03-18 02:19:59.286 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:19:59.286 -07 000000462 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:19:59.286 -07 000000462 INF: Y Motor: Position error before settling (table move) = -24 encoder counts (-0.012 mm)
17-03-18 02:19:59.286 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.845 mm, average velocity = 2.199 mm/sec
17-03-18 02:20:00.236 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:00.236 -07 000000629 INF: FPGA: Recv YRDPOS 137976
17-03-18 02:20:00.246 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:00.246 -07 000000462 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:00.266 -07 000000462 INF: Y Motor: After move to 67.382607, error = -0.011513, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:00.266 -07 000000462 INF: Y Motor: Position error after settling (table move) = -24 encoder counts (-0.012 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:00.266 -07 000000462 INF: Y Motor: Moved to 67.3711 after 1442 ms (table move)
17-03-18 02:20:00.276 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169664 mm (DAC = 37063)
17-03-18 02:20:00.276 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.276 -07 000000501 INF: FPGA: Recv ZSGSRD 35699
17-03-18 02:20:00.286 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.286 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.286 -07 000000579 INF: FPGA: Recv ZSGSRD 35709
17-03-18 02:20:00.296 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.296 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.296 -07 000000502 INF: FPGA: Recv ZSGSRD 35704
17-03-18 02:20:00.306 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.306 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.306 -07 000000629 INF: FPGA: Recv ZSGSRD 35699
17-03-18 02:20:00.316 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.316 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.316 -07 000000424 INF: FPGA: Recv ZSGSRD 35700
17-03-18 02:20:00.326 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.326 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.326 -07 000000561 INF: FPGA: Recv ZSGSRD 35695
17-03-18 02:20:00.336 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.336 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.336 -07 000000579 INF: FPGA: Recv ZSGSRD 35700
17-03-18 02:20:00.346 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.346 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.346 -07 000000626 INF: FPGA: Recv ZSGSRD 35702
17-03-18 02:20:00.356 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.356 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.356 -07 000000430 INF: FPGA: Recv ZSGSRD 35700
17-03-18 02:20:00.366 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.366 -07 000000467 INF: FPGA: Recv ZSGSRD 35705
17-03-18 02:20:00.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.376 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:00.376 -07 000000618 INF: FPGA: Recv ZPIEZORD 31583
17-03-18 02:20:00.386 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.386 -07 000000610 INF: Z Motor: Piezo is near 47.5 V (nominally 0 to 100 V), expect near 56.6 V, since DAC is at 5.655 V. Piezo Error = -9.1 V.
17-03-18 02:20:00.386 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.7 um, Read 10 ADC samples: Avg = 35701 (-168.8 uncal um), Error = 0.9 uncal um, Median = 35700 (-168.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 35695 (-168.8 uncal um), Max = 35709 (-168.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:00.386 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35701, posNoise = 8, negNoise = 6
17-03-18 02:20:00.386 -07 000000610 INF: Z Motor: After move to -0.169664, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:00.386 -07 000000610 INF: Z Motor: Settle wait time = 1444 ms, measure time = 110 ms (allowed 150 ms), total time = 1554 ms
17-03-18 02:20:00.386 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:00.416 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.997626,
17-03-18 02:20:00.426 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-18 02:20:00.426 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:00.426 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37109375, Z-position -0.169674149684143. ----------
17-03-18 02:20:00.426 -07 000000610 INF: Cycle	98	Tile	10	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:00.426 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36886, sync = True, waitForSettling = True)
17-03-18 02:20:00.426 -07 000000610 INF: Z Motor: Moving to -0.168853 mm, started at -0.169674 mm, distance = 0.82 um
17-03-18 02:20:00.436 -07 000000610 INF: FPGA: Xmit ZDACW 36886\n [Z Motor]
17-03-18 02:20:00.436 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 02:20:00.446 -07 000000610 INF: FPGA: 'ZDACW 36886' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 02:20:00.466 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:00.466 -07 000000606 INF: FPGA: Recv ZDACR 36886
17-03-18 02:20:00.476 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:20:00.476 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:00.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.626 -07 000000579 INF: FPGA: Recv ZSGSRD 35574
17-03-18 02:20:00.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.636 -07 000000502 INF: FPGA: Recv ZSGSRD 35575
17-03-18 02:20:00.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.646 -07 000000467 INF: FPGA: Recv ZSGSRD 35577
17-03-18 02:20:00.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.656 -07 000000455 INF: FPGA: Recv ZSGSRD 35571
17-03-18 02:20:00.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.666 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.666 -07 000000512 INF: FPGA: Recv ZSGSRD 35578
17-03-18 02:20:00.676 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.676 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.676 -07 000000626 INF: FPGA: Recv ZSGSRD 35581
17-03-18 02:20:00.686 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.686 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.686 -07 000000424 INF: FPGA: Recv ZSGSRD 35575
17-03-18 02:20:00.696 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.696 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.696 -07 000000579 INF: FPGA: Recv ZSGSRD 35581
17-03-18 02:20:00.706 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.706 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.706 -07 000000629 INF: FPGA: Recv ZSGSRD 35576
17-03-18 02:20:00.716 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.716 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:00.716 -07 000000444 INF: FPGA: Recv ZSGSRD 35572
17-03-18 02:20:00.726 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.726 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:00.726 -07 000000461 INF: FPGA: Recv ZPIEZORD 31400
17-03-18 02:20:00.736 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:00.736 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.628 V. Piezo Error = -9.2 V.
17-03-18 02:20:00.736 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.9 um, Read 10 ADC samples: Avg = 35576 (-168.0 uncal um), Error = 0.9 uncal um, Median = 35576 (-168.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35571 (-168.0 uncal um), Max = 35581 (-168.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:20:00.736 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35576, posNoise = 5, negNoise = 5
17-03-18 02:20:00.736 -07 000000610 INF: Z Motor: After move to -0.168853, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:00.736 -07 000000610 INF: Z Motor: MoveAbsStepped took 304 ms)
17-03-18 02:20:00.736 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:00.736 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:00.736 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:00.736 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:00.736 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:00.736 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:00.736 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:00.736 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:00.736 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:00.736 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:00.736 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:00.736 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:00.746 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 02:20:00.746 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:00.746 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:00.746 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:00.756 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 02:20:00.756 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 02:20:00.756 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 02:20:00.756 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 02:20:00.756 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 37063 150\n [Camera]
17-03-18 02:20:00.956 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:01.356 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:01.356 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:01.356 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:01.356 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:01.356 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 02:20:01.356 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:01.356 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:01.356 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:01.356 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:01.356 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 02:20:01.466 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:01.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:01.546 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 37063 779
17-03-18 02:20:01.696 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:01.726 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:20:01.726 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 02:20:01.726 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:01.726 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 02:20:01.726 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 02:20:01.736 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:01.736 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:01.736 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:20:01.736 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:01.746 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 02:20:01.886 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:01.886 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:01.886 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:01.996 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:01.996 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:02.006 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:02.006 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:02.006 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:20:02.006 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:02.006 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:20:02.076 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:02.076 -07 000000455 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:02.076 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 37063 150' command took 2 ms to send, 1314 ms to get response, and 1317 ms overall
17-03-18 02:20:02.076 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.169051
17-03-18 02:20:02.076 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.16905 mm
17-03-18 02:20:02.076 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:02.076 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 02:20:02.076 -07 000000606 INF: Y Motor: Moving to 68.2126 mm, started at 67.3711 mm, delta = 0.8415 mm
17-03-18 02:20:02.076 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:02.086 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 36929, sync = True, waitForSettling = False)
17-03-18 02:20:02.086 -07 000000561 INF: Z Motor: Moving to -0.169050 mm, started at -0.168871 mm, distance = -0.18 um
17-03-18 02:20:02.086 -07 000000561 INF: FPGA: Xmit ZDACW 36929\n [Z Motor]
17-03-18 02:20:02.086 -07 000000501 INF: FPGA: Recv YRDPOS 137976
17-03-18 02:20:02.086 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 02:20:02.086 -07 000000606 INF: Y Motor: Encoder = 137976 = motor step 107793.8 = 67.3711 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:02.086 -07 000000606 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:02.086 -07 000000606 INF: Y Motor: Moving 1346 steps-24
17-03-18 02:20:02.086 -07 000000455 INF: FPGA: Recv ZDACW
17-03-18 02:20:02.096 -07 000000561 INF: FPGA: 'ZDACW 36929' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:02.096 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:02.106 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:02.106 -07 000000455 INF: FPGA: Recv ZDACR 36929
17-03-18 02:20:02.116 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:02.116 -07 000000561 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 02:20:02.386 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:20:02.386 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:20:02.386 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:02.386 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 02:20:02.386 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:20:02.386 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:02.386 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:02.386 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:02.386 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 505 ms.
17-03-18 02:20:02.396 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 02:20:02.466 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 02:20:02.466 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 386 ms overall
17-03-18 02:20:02.516 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:02.516 -07 000000576 INF: FPGA: Recv YRDPOS 139682
17-03-18 02:20:02.526 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:02.526 -07 000000606 INF: Y Motor: Encoder = 139682 = motor step 109126.6 = 68.2041 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:02.526 -07 000000606 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 02:20:02.526 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 386 ms, distance = 0.842 mm, average velocity = 2.180 mm/sec
17-03-18 02:20:03.476 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:03.476 -07 000000455 INF: FPGA: Recv YRDPOS 139683
17-03-18 02:20:03.486 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:03.486 -07 000000606 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:03.506 -07 000000606 INF: Y Motor: After move to 68.212608, error = -0.008018, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:03.506 -07 000000606 INF: Y Motor: Position error after settling (table move) = -16 encoder counts (-0.008 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:20:03.506 -07 000000606 INF: Y Motor: Moved to 68.2046 after 1426 ms (table move)
17-03-18 02:20:03.506 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.169050 mm (DAC = 36929)
17-03-18 02:20:03.506 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.516 -07 000000424 INF: FPGA: Recv ZSGSRD 35607
17-03-18 02:20:03.516 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 02:20:03.516 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.516 -07 000000461 INF: FPGA: Recv ZSGSRD 35608
17-03-18 02:20:03.526 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:03.526 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.526 -07 000000501 INF: FPGA: Recv ZSGSRD 35603
17-03-18 02:20:03.536 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.536 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.536 -07 000000629 INF: FPGA: Recv ZSGSRD 35607
17-03-18 02:20:03.546 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.546 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.546 -07 000000590 INF: FPGA: Recv ZSGSRD 35603
17-03-18 02:20:03.556 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.556 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.556 -07 000000618 INF: FPGA: Recv ZSGSRD 35603
17-03-18 02:20:03.566 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.566 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.566 -07 000000444 INF: FPGA: Recv ZSGSRD 35606
17-03-18 02:20:03.576 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.576 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.576 -07 000000626 INF: FPGA: Recv ZSGSRD 35598
17-03-18 02:20:03.586 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.586 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.586 -07 000000462 INF: FPGA: Recv ZSGSRD 35607
17-03-18 02:20:03.596 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.596 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.596 -07 000000569 INF: FPGA: Recv ZSGSRD 35609
17-03-18 02:20:03.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.606 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:03.606 -07 000000576 INF: FPGA: Recv ZPIEZORD 31431
17-03-18 02:20:03.616 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.616 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.4 V, since DAC is at 5.635 V. Piezo Error = -9.2 V.
17-03-18 02:20:03.616 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -169.1 um, Read 10 ADC samples: Avg = 35605 (-168.2 uncal um), Error = 0.9 uncal um, Median = 35606 (-168.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35598 (-168.1 uncal um), Max = 35609 (-168.2 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:20:03.616 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35605, posNoise = 4, negNoise = 7
17-03-18 02:20:03.616 -07 000000610 INF: Z Motor: After move to -0.169050, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:03.616 -07 000000610 INF: Z Motor: Settle wait time = 1428 ms, measure time = 102 ms (allowed 150 ms), total time = 1530 ms
17-03-18 02:20:03.616 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:03.666 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms
17-03-18 02:20:03.666 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:03.666 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20458984375, Z-position -0.169057425318534. ----------
17-03-18 02:20:03.666 -07 000000610 INF: Cycle	98	Tile	11	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:03.666 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36753, sync = True, waitForSettling = True)
17-03-18 02:20:03.666 -07 000000610 INF: Z Motor: Moving to -0.168244 mm, started at -0.169057 mm, distance = 0.81 um
17-03-18 02:20:03.666 -07 000000610 INF: FPGA: Xmit ZDACW 36753\n [Z Motor]
17-03-18 02:20:03.666 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 02:20:03.676 -07 000000610 INF: FPGA: 'ZDACW 36753' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:03.676 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:03.676 -07 000000591 INF: FPGA: Recv ZDACR 36753
17-03-18 02:20:03.686 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.686 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:03.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.836 -07 000000424 INF: FPGA: Recv ZSGSRD 35485
17-03-18 02:20:03.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:03.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.846 -07 000000569 INF: FPGA: Recv ZSGSRD 35483
17-03-18 02:20:03.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.856 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.856 -07 000000501 INF: FPGA: Recv ZSGSRD 35482
17-03-18 02:20:03.866 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.866 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.866 -07 000000502 INF: FPGA: Recv ZSGSRD 35478
17-03-18 02:20:03.876 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.876 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.876 -07 000000467 INF: FPGA: Recv ZSGSRD 35475
17-03-18 02:20:03.886 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.886 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.886 -07 000000629 INF: FPGA: Recv ZSGSRD 35488
17-03-18 02:20:03.896 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.896 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.896 -07 000000590 INF: FPGA: Recv ZSGSRD 35482
17-03-18 02:20:03.906 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.906 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.906 -07 000000424 INF: FPGA: Recv ZSGSRD 35481
17-03-18 02:20:03.916 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.916 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.916 -07 000000579 INF: FPGA: Recv ZSGSRD 35479
17-03-18 02:20:03.926 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.926 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:03.926 -07 000000501 INF: FPGA: Recv ZSGSRD 35479
17-03-18 02:20:03.936 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.936 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:03.936 -07 000000618 INF: FPGA: Recv ZPIEZORD 31247
17-03-18 02:20:03.946 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:03.946 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.1 V, since DAC is at 5.608 V. Piezo Error = -9.3 V.
17-03-18 02:20:03.946 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.2 um, Read 10 ADC samples: Avg = 35481 (-167.4 uncal um), Error = 0.9 uncal um, Median = 35482 (-167.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 35475 (-167.4 uncal um), Max = 35488 (-167.4 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:03.946 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35481, posNoise = 7, negNoise = 6
17-03-18 02:20:03.946 -07 000000610 INF: Z Motor: After move to -0.168244, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:03.946 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:20:03.946 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:03.946 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:03.946 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:03.946 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:03.946 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:03.946 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:03.946 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:03.946 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:03.946 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:03.946 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:03.946 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:03.946 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:03.956 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:03.956 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:03.956 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:03.956 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:03.966 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 02:20:03.966 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:20:03.966 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 02:20:03.966 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:20:03.966 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36929 150\n [Camera]
17-03-18 02:20:04.166 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:04.566 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:04.566 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:04.566 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:04.566 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:04.566 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:04.566 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:04.566 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:04.566 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) start.
17-03-18 02:20:04.576 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:04.576 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:20:04.756 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36929 779
17-03-18 02:20:04.916 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 931
17-03-18 02:20:04.946 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 1163922192, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 02:20:04.946 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:20:04.946 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:04.946 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 02:20:04.946 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 02:20:04.946 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:04.946 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:04.946 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:04.946 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:20:04.956 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 02:20:05.096 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:05.096 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:05.096 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:05.096 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:05.096 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 02:20:05.096 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:05.096 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:05.096 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:05.216 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:05.216 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 02:20:05.286 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:05.286 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:05.286 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36929 150' command took 2 ms to send, 1306 ms to get response, and 1318 ms overall
17-03-18 02:20:05.286 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.168797
17-03-18 02:20:05.286 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.16880 mm
17-03-18 02:20:05.286 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:05.296 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 36874, sync = True, waitForSettling = False)
17-03-18 02:20:05.296 -07 000000591 INF: Z Motor: Moving to -0.168798 mm, started at -0.168261 mm, distance = -0.54 um
17-03-18 02:20:05.296 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 02:20:05.296 -07 000000501 INF: Y Motor: Moving to 69.0426 mm, started at 68.2046 mm, delta = 0.8380 mm
17-03-18 02:20:05.296 -07 000000591 INF: FPGA: Xmit ZDACW 36874\n [Z Motor]
17-03-18 02:20:05.296 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 02:20:05.306 -07 000000591 INF: FPGA: 'ZDACW 36874' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:20:05.306 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:05.306 -07 000000455 INF: FPGA: Recv ZDACR 36874
17-03-18 02:20:05.316 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:05.316 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:05.316 -07 000000591 INF: Z Motor: MoveAbsStepped took 17 ms (did NOT wait for settling yet))
17-03-18 02:20:05.316 -07 000000444 INF: FPGA: Recv YRDPOS 139683
17-03-18 02:20:05.326 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 27 ms overall
17-03-18 02:20:05.326 -07 000000501 INF: Y Motor: Encoder = 139683 = motor step 109127.3 = 68.2046 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:05.326 -07 000000501 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:05.326 -07 000000501 INF: Y Motor: Moving 1341 steps-17
17-03-18 02:20:05.326 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:05.486 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 02:20:05.486 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:20:05.486 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:05.486 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:05.486 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 02:20:05.596 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 02:20:05.596 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 378 ms.
17-03-18 02:20:05.596 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:05.596 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:05.606 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 507 ms.
17-03-18 02:20:05.696 -07 000000502 INF: FPGA: Recv YMVTILE
17-03-18 02:20:05.696 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 378 ms overall
17-03-18 02:20:05.746 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:05.746 -07 000000430 INF: FPGA: Recv YRDPOS 141366
17-03-18 02:20:05.756 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:05.756 -07 000000501 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:05.756 -07 000000501 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 02:20:05.756 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.838 mm, average velocity = 2.217 mm/sec
17-03-18 02:20:05.786 -07 000000561 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.007176,
17-03-18 02:20:06.466 -07 000000569 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:06.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:06.706 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:06.706 -07 000000606 INF: FPGA: Recv YRDPOS 141366
17-03-18 02:20:06.716 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:06.716 -07 000000501 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:06.736 -07 000000501 INF: Y Motor: After move to 69.042610, error = -0.016243, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:06.736 -07 000000501 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:06.736 -07 000000501 INF: Y Motor: Moved to 69.0264 after 1445 ms (table move)
17-03-18 02:20:06.746 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.168798 mm (DAC = 36874)
17-03-18 02:20:06.746 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.746 -07 000000430 INF: FPGA: Recv ZSGSRD 35574
17-03-18 02:20:06.756 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.756 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.756 -07 000000462 INF: FPGA: Recv ZSGSRD 35572
17-03-18 02:20:06.766 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.766 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.766 -07 000000455 INF: FPGA: Recv ZSGSRD 35564
17-03-18 02:20:06.776 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.776 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.776 -07 000000576 INF: FPGA: Recv ZSGSRD 35563
17-03-18 02:20:06.786 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.786 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.786 -07 000000618 INF: FPGA: Recv ZSGSRD 35566
17-03-18 02:20:06.796 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.796 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.796 -07 000000579 INF: FPGA: Recv ZSGSRD 35566
17-03-18 02:20:06.806 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.806 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.806 -07 000000512 INF: FPGA: Recv ZSGSRD 35567
17-03-18 02:20:06.816 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.816 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.816 -07 000000455 INF: FPGA: Recv ZSGSRD 35568
17-03-18 02:20:06.826 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.826 -07 000000591 INF: FPGA: Recv ZSGSRD 35571
17-03-18 02:20:06.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:06.836 -07 000000606 INF: FPGA: Recv ZSGSRD 35570
17-03-18 02:20:06.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.846 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:06.846 -07 000000579 INF: FPGA: Recv ZPIEZORD 31415
17-03-18 02:20:06.856 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.856 -07 000000610 INF: Z Motor: Piezo is near 47.1 V (nominally 0 to 100 V), expect near 56.3 V, since DAC is at 5.627 V. Piezo Error = -9.2 V.
17-03-18 02:20:06.856 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.8 um, Read 10 ADC samples: Avg = 35568 (-167.9 uncal um), Error = 0.9 uncal um, Median = 35568 (-167.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35563 (-167.9 uncal um), Max = 35574 (-168.0 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:20:06.856 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35568, posNoise = 6, negNoise = 5
17-03-18 02:20:06.856 -07 000000610 INF: Z Motor: After move to -0.168798, error = -0.000021, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:06.856 -07 000000610 INF: Z Motor: Settle wait time = 1448 ms, measure time = 110 ms (allowed 150 ms), total time = 1558 ms
17-03-18 02:20:06.856 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:06.896 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 02:20:06.896 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:06.896 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.0263671875, Z-position -0.168819729469289. ----------
17-03-18 02:20:06.896 -07 000000610 INF: Cycle	98	Tile	12	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:06.896 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36697, sync = True, waitForSettling = True)
17-03-18 02:20:06.896 -07 000000610 INF: Z Motor: Moving to -0.167988 mm, started at -0.168820 mm, distance = 0.83 um
17-03-18 02:20:06.896 -07 000000610 INF: FPGA: Xmit ZDACW 36697\n [Z Motor]
17-03-18 02:20:06.896 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 02:20:06.906 -07 000000610 INF: FPGA: 'ZDACW 36697' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:06.906 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:06.906 -07 000000461 INF: FPGA: Recv ZDACR 36697
17-03-18 02:20:06.916 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:06.916 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:07.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.066 -07 000000424 INF: FPGA: Recv ZSGSRD 35439
17-03-18 02:20:07.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:07.076 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.076 -07 000000618 INF: FPGA: Recv ZSGSRD 35452
17-03-18 02:20:07.086 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:07.086 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.086 -07 000000502 INF: FPGA: Recv ZSGSRD 35439
17-03-18 02:20:07.096 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.096 -07 000000626 INF: FPGA: Recv ZSGSRD 35439
17-03-18 02:20:07.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.106 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.106 -07 000000561 INF: FPGA: Recv ZSGSRD 35440
17-03-18 02:20:07.116 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.116 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.116 -07 000000569 INF: FPGA: Recv ZSGSRD 35447
17-03-18 02:20:07.126 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.126 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.126 -07 000000512 INF: FPGA: Recv ZSGSRD 35439
17-03-18 02:20:07.136 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.136 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.136 -07 000000455 INF: FPGA: Recv ZSGSRD 35435
17-03-18 02:20:07.146 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.146 -07 000000626 INF: FPGA: Recv ZSGSRD 35439
17-03-18 02:20:07.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.156 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:07.156 -07 000000502 INF: FPGA: Recv ZSGSRD 35442
17-03-18 02:20:07.166 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.166 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:07.166 -07 000000424 INF: FPGA: Recv ZPIEZORD 31208
17-03-18 02:20:07.176 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:07.176 -07 000000610 INF: Z Motor: Piezo is near 46.7 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.600 V. Piezo Error = -9.3 V.
17-03-18 02:20:07.176 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -168.0 um, Read 10 ADC samples: Avg = 35441 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35439 (-167.1 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 35435 (-167.1 uncal um), Max = 35452 (-167.2 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:07.176 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35441, posNoise = 11, negNoise = 6
17-03-18 02:20:07.176 -07 000000610 INF: Z Motor: After move to -0.167988, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:07.176 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:20:07.176 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:07.176 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:07.176 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:07.176 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:07.176 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:07.176 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:07.176 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:07.176 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:07.176 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:07.176 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:07.176 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:07.176 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:07.176 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:07.176 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:07.186 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:20:07.186 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:07.196 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 02:20:07.196 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 02:20:07.196 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:20:07.196 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:20:07.196 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36874 150\n [Camera]
17-03-18 02:20:07.396 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:07.796 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:07.796 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:07.796 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:07.796 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:07.796 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:07.796 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:07.796 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:07.796 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:20:07.806 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:07.806 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:20:07.986 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36874 779
17-03-18 02:20:08.136 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:08.176 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 02:20:08.176 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 02:20:08.176 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:08.176 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 02:20:08.176 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 375 ms.
17-03-18 02:20:08.176 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:08.176 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:08.176 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:08.176 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:20:08.186 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 02:20:08.326 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:08.326 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:08.326 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:08.326 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:08.326 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) start.
17-03-18 02:20:08.326 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:08.326 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:08.336 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:08.336 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:08.336 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 02:20:08.516 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:08.516 -07 000000569 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:08.516 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36874 150' command took 2 ms to send, 1306 ms to get response, and 1317 ms overall
17-03-18 02:20:08.516 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 02:20:08.516 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.0263671875, Z-Position -0.168003854527285. ------
17-03-18 02:20:08.526 -07 000000501 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.17436 mm
17-03-18 02:20:08.526 -07 000000501 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:08.526 -07 000000424 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:08.526 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 38090, sync = True, waitForSettling = False)
17-03-18 02:20:08.526 -07 000000591 INF: Z Motor: Moving to -0.174365 mm, started at -0.168004 mm, distance = -6.36 um
17-03-18 02:20:08.526 -07 000000606 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 02:20:08.526 -07 000000606 INF: Y Motor: Moving to 69.8726 mm, started at 69.0264 mm, delta = 0.8462 mm
17-03-18 02:20:08.526 -07 000000618 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:08.536 -07 000000424 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:20:08.536 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:08.536 -07 000000579 INF: FPGA: Recv YRDPOS 141366
17-03-18 02:20:08.546 -07 000000591 INF: FPGA: Xmit ZDACW 38090\n [Z Motor]
17-03-18 02:20:08.546 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 02:20:08.546 -07 000000606 INF: Y Motor: Encoder = 141366 = motor step 110442.2 = 69.0264 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:08.546 -07 000000606 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:08.546 -07 000000606 INF: Y Motor: Moving 1354 steps-33
17-03-18 02:20:08.546 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:20:08.556 -07 000000424 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:20:08.556 -07 000000591 INF: FPGA: 'ZDACW 38090' command took 0 ms to send, 0 ms to get response, and 25 ms overall
17-03-18 02:20:08.566 -07 000000606 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:08.576 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:08.576 -07 000000462 INF: FPGA: Recv ZDACR 38090
17-03-18 02:20:08.586 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:20:08.586 -07 000000591 INF: Z Motor: MoveAbsStepped took 55 ms (did NOT wait for settling yet))
17-03-18 02:20:08.706 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1163922192, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 02:20:08.706 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 02:20:08.706 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:08.706 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:08.706 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 02:20:08.716 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 02:20:08.716 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 02:20:08.716 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:08.716 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:08.726 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 02:20:08.756 -07 000000462 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:20:08.756 -07 000000424 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 02:20:08.936 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 02:20:08.936 -07 000000606 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:20:08.986 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:08.986 -07 000000461 INF: FPGA: Recv YRDPOS 143078
17-03-18 02:20:08.996 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:08.996 -07 000000606 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:08.996 -07 000000606 INF: Y Motor: Position error before settling (table move) = -21 encoder counts (-0.010 mm)
17-03-18 02:20:08.996 -07 000000606 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.132 mm/sec
17-03-18 02:20:09.946 -07 000000606 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:09.946 -07 000000626 INF: FPGA: Recv YRDPOS 143078
17-03-18 02:20:09.956 -07 000000606 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:09.956 -07 000000606 INF: Y Motor: Encoder = 143078 = motor step 111779.7 = 69.8623 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:09.986 -07 000000606 INF: Y Motor: After move to 69.872612, error = -0.010307, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:09.986 -07 000000606 INF: Y Motor: Position error after settling (table move) = -21 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:09.986 -07 000000606 INF: Y Motor: Moved to 69.8623 after 1455 ms (table move)
17-03-18 02:20:09.986 -07 000000501 INF: Z Motor: EndOfMoveAbsStepped: target = -0.174365 mm (DAC = 38090)
17-03-18 02:20:09.986 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:09.986 -07 000000579 INF: FPGA: Recv ZSGSRD 36437
17-03-18 02:20:09.996 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:09.996 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:09.996 -07 000000618 INF: FPGA: Recv ZSGSRD 36435
17-03-18 02:20:10.006 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.006 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.006 -07 000000590 INF: FPGA: Recv ZSGSRD 36435
17-03-18 02:20:10.016 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.016 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.016 -07 000000444 INF: FPGA: Recv ZSGSRD 36435
17-03-18 02:20:10.026 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.026 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.026 -07 000000561 INF: FPGA: Recv ZSGSRD 36428
17-03-18 02:20:10.036 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.036 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.036 -07 000000576 INF: FPGA: Recv ZSGSRD 36427
17-03-18 02:20:10.046 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.046 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.046 -07 000000569 INF: FPGA: Recv ZSGSRD 36430
17-03-18 02:20:10.056 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.056 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.056 -07 000000590 INF: FPGA: Recv ZSGSRD 36431
17-03-18 02:20:10.066 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.066 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.066 -07 000000626 INF: FPGA: Recv ZSGSRD 36433
17-03-18 02:20:10.076 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.076 -07 000000501 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:10.076 -07 000000424 INF: FPGA: Recv ZSGSRD 36431
17-03-18 02:20:10.086 -07 000000501 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.086 -07 000000501 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:10.086 -07 000000502 INF: FPGA: Recv ZPIEZORD 32544
17-03-18 02:20:10.096 -07 000000501 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.096 -07 000000501 INF: Z Motor: Piezo is near 49.5 V (nominally 0 to 100 V), expect near 58.1 V, since DAC is at 5.812 V. Piezo Error = -8.6 V.
17-03-18 02:20:10.096 -07 000000501 INF: Z Motor: ReadAdcAverage: Commanded Z = -174.4 um, Read 10 ADC samples: Avg = 36432 (-173.5 uncal um), Error = 0.9 uncal um, Median = 36432 (-173.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 36427 (-173.5 uncal um), Max = 36437 (-173.5 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:20:10.096 -07 000000501 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36432, posNoise = 5, negNoise = 5
17-03-18 02:20:10.096 -07 000000501 INF: Z Motor: After move to -0.174365, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:10.096 -07 000000501 INF: Z Motor: Settle wait time = 1461 ms, measure time = 105 ms (allowed 150 ms), total time = 1566 ms
17-03-18 02:20:10.096 -07 000000501 INF: Z Motor: Waiting extra 45 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:10.146 -07 000000501 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1617 ms
17-03-18 02:20:10.146 -07 000000501 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:10.146 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:10.146 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:10.146 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:20:10.146 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:10.146 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:10.146 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:10.146 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:20:10.146 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:10.156 -07 000000424 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:10.156 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:20:10.166 -07 000000424 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 02:20:10.166 -07 000000424 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 15 ms.
17-03-18 02:20:10.166 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:20:10.216 -07 000000569 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:20:10.516 -07 000000512 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:20:10.516 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:20:10.516 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:20:10.516 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) start.
17-03-18 02:20:10.546 -07 000000502 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:20:10.556 -07 000000618 INF: FPGA: Recv CAMSNAP
17-03-18 02:20:10.556 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 02:20:10.646 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 02:20:10.646 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:10.646 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:20:10.646 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 02:20:10.656 -07 000000430 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:10.656 -07 000000512 INF: Autofocus start
17-03-18 02:20:10.656 -07 000000512 INF: MeasureProfile start
17-03-18 02:20:10.656 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:10.666 -07 000000430 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:10.666 -07 000000430 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:20:10.666 -07 000000512 INF: MeasureProfile done
17-03-18 02:20:10.666 -07 000000512 INF: X=32  Z correction [um]=0.09220707
17-03-18 02:20:10.666 -07 000000512 INF: Autofocus finished
17-03-18 02:20:10.866 -07 000000561 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:20:10.866 -07 000000430 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 191 ms to get response, and 202 ms overall
17-03-18 02:20:10.866 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.8623046875, Z-position -0.17437024875977. ----------
17-03-18 02:20:10.866 -07 000000610 INF: Cycle	98	Tile	13	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:10.876 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36622, sync = True, waitForSettling = True)
17-03-18 02:20:10.876 -07 000000610 INF: Z Motor: Moving to -0.167645 mm, started at -0.174370 mm, distance = 6.73 um
17-03-18 02:20:10.876 -07 000000610 INF: FPGA: Xmit ZDACW 36622\n [Z Motor]
17-03-18 02:20:10.876 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 02:20:10.886 -07 000000610 INF: FPGA: 'ZDACW 36622' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.886 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:10.886 -07 000000462 INF: FPGA: Recv ZDACR 36622
17-03-18 02:20:10.896 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:10.896 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:11.046 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.046 -07 000000424 INF: FPGA: Recv ZSGSRD 35390
17-03-18 02:20:11.056 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:11.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.056 -07 000000561 INF: FPGA: Recv ZSGSRD 35388
17-03-18 02:20:11.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.066 -07 000000512 INF: FPGA: Recv ZSGSRD 35387
17-03-18 02:20:11.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.076 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.076 -07 000000444 INF: FPGA: Recv ZSGSRD 35387
17-03-18 02:20:11.086 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.086 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.086 -07 000000462 INF: FPGA: Recv ZSGSRD 35391
17-03-18 02:20:11.096 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.096 -07 000000576 INF: FPGA: Recv ZSGSRD 35384
17-03-18 02:20:11.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.106 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.106 -07 000000626 INF: FPGA: Recv ZSGSRD 35390
17-03-18 02:20:11.116 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.116 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.116 -07 000000590 INF: FPGA: Recv ZSGSRD 35388
17-03-18 02:20:11.126 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:11.126 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.126 -07 000000606 INF: FPGA: Recv ZSGSRD 35384
17-03-18 02:20:11.136 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:11.146 -07 000000576 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.019446,
17-03-18 02:20:11.146 -07 000000590 INF: FPGA: Recv ZSGSRD 35380
17-03-18 02:20:11.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:11.156 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:11.156 -07 000000606 INF: FPGA: Recv ZPIEZORD 31156
17-03-18 02:20:11.166 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:11.166 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.9 V, since DAC is at 5.588 V. Piezo Error = -9.3 V.
17-03-18 02:20:11.166 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.6 um, Read 10 ADC samples: Avg = 35387 (-166.8 uncal um), Error = 0.9 uncal um, Median = 35388 (-166.8 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35380 (-166.7 uncal um), Max = 35391 (-166.8 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:20:11.166 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35387, posNoise = 4, negNoise = 7
17-03-18 02:20:11.166 -07 000000610 INF: Z Motor: After move to -0.167645, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:11.166 -07 000000610 INF: Z Motor: MoveAbsStepped took 290 ms)
17-03-18 02:20:11.166 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:11.166 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:11.166 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:11.166 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:11.166 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:11.166 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:11.166 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:11.166 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:11.166 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:11.166 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:11.166 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:11.166 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:11.176 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:11.176 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:11.176 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:11.176 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:11.186 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 02:20:11.186 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 02:20:11.186 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:20:11.186 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:11.206 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36799 150\n [Camera]
17-03-18 02:20:11.396 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:11.466 -07 000000424 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:11.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:11.796 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:11.796 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:11.796 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:11.796 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:11.796 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 02:20:11.796 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:11.796 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:11.796 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:11.796 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:11.796 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 02:20:11.986 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36799 779
17-03-18 02:20:12.136 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:12.176 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:20:12.176 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 02:20:12.176 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:12.176 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 02:20:12.176 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 02:20:12.176 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:12.176 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:12.176 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:12.176 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:20:12.186 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 02:20:12.326 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:12.326 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:12.326 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:12.326 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:12.326 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:20:12.336 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:12.336 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:12.336 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:12.336 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:12.336 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:20:12.516 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:12.516 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:12.516 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36799 150' command took 2 ms to send, 1307 ms to get response, and 1328 ms overall
17-03-18 02:20:12.516 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.167949
17-03-18 02:20:12.526 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.16795 mm
17-03-18 02:20:12.526 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:12.526 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 02:20:12.526 -07 000000618 INF: Y Motor: Moving to 70.7026 mm, started at 69.8623 mm, delta = 0.8403 mm
17-03-18 02:20:12.526 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:12.526 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 36688, sync = True, waitForSettling = False)
17-03-18 02:20:12.526 -07 000000591 INF: Z Motor: Moving to -0.167947 mm, started at -0.167657 mm, distance = -0.29 um
17-03-18 02:20:12.526 -07 000000512 INF: FPGA: Recv YRDPOS 143079
17-03-18 02:20:12.536 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:12.536 -07 000000591 INF: FPGA: Xmit ZDACW 36688\n [Z Motor]
17-03-18 02:20:12.536 -07 000000618 INF: Y Motor: Encoder = 143079 = motor step 111780.5 = 69.8628 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:12.536 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 02:20:12.536 -07 000000618 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:12.536 -07 000000618 INF: Y Motor: Moving 1344 steps-21
17-03-18 02:20:12.546 -07 000000591 INF: FPGA: 'ZDACW 36688' command took 0 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 02:20:12.546 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:12.556 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:12.556 -07 000000626 INF: FPGA: Recv ZDACR 36688
17-03-18 02:20:12.566 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:12.566 -07 000000591 INF: Z Motor: MoveAbsStepped took 35 ms (did NOT wait for settling yet))
17-03-18 02:20:12.716 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 02:20:12.716 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:20:12.716 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:12.716 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 02:20:12.716 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 02:20:12.716 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:12.726 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:12.726 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 02:20:12.726 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 02:20:12.726 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 02:20:12.926 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 02:20:12.926 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 371 ms to get response, and 386 ms overall
17-03-18 02:20:12.966 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:12.966 -07 000000455 INF: FPGA: Recv YRDPOS 144768
17-03-18 02:20:12.976 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:12.976 -07 000000618 INF: Y Motor: Encoder = 144768 = motor step 113100.0 = 70.6875 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:12.976 -07 000000618 INF: Y Motor: Position error before settling (table move) = -31 encoder counts (-0.015 mm)
17-03-18 02:20:12.976 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.840 mm, average velocity = 2.171 mm/sec
17-03-18 02:20:13.926 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:13.926 -07 000000461 INF: FPGA: Recv YRDPOS 144769
17-03-18 02:20:13.936 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:13.936 -07 000000618 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:13.956 -07 000000618 INF: Y Motor: After move to 70.702606, error = -0.014618, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:13.956 -07 000000618 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:20:13.956 -07 000000618 INF: Y Motor: Moved to 70.6880 after 1433 ms (table move)
17-03-18 02:20:13.956 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167947 mm (DAC = 36688)
17-03-18 02:20:13.956 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:13.966 -07 000000462 INF: FPGA: Recv ZSGSRD 35434
17-03-18 02:20:13.976 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:13.976 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:13.976 -07 000000455 INF: FPGA: Recv ZSGSRD 35435
17-03-18 02:20:13.986 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:13.986 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:13.986 -07 000000629 INF: FPGA: Recv ZSGSRD 35436
17-03-18 02:20:13.996 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:13.996 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:13.996 -07 000000461 INF: FPGA: Recv ZSGSRD 35439
17-03-18 02:20:14.006 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.006 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.006 -07 000000576 INF: FPGA: Recv ZSGSRD 35436
17-03-18 02:20:14.016 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.016 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.016 -07 000000590 INF: FPGA: Recv ZSGSRD 35436
17-03-18 02:20:14.026 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.026 -07 000000591 INF: FPGA: Recv ZSGSRD 35435
17-03-18 02:20:14.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.036 -07 000000444 INF: FPGA: Recv ZSGSRD 35433
17-03-18 02:20:14.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.046 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.046 -07 000000467 INF: FPGA: Recv ZSGSRD 35433
17-03-18 02:20:14.056 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.056 -07 000000591 INF: FPGA: Recv ZSGSRD 35431
17-03-18 02:20:14.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.066 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:14.066 -07 000000462 INF: FPGA: Recv ZPIEZORD 31255
17-03-18 02:20:14.076 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.076 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.598 V. Piezo Error = -9.2 V.
17-03-18 02:20:14.076 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35435 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35435 (-167.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 35431 (-167.1 uncal um), Max = 35439 (-167.1 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:20:14.076 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35435, posNoise = 4, negNoise = 4
17-03-18 02:20:14.076 -07 000000610 INF: Z Motor: After move to -0.167947, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:14.076 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 111 ms (allowed 150 ms), total time = 1546 ms
17-03-18 02:20:14.076 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:14.116 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1589 ms
17-03-18 02:20:14.116 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:14.116 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.68798828125, Z-position -0.167965309254434. ----------
17-03-18 02:20:14.116 -07 000000610 INF: Cycle	98	Tile	14	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:14.116 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36512, sync = True, waitForSettling = True)
17-03-18 02:20:14.116 -07 000000610 INF: Z Motor: Moving to -0.167141 mm, started at -0.167965 mm, distance = 0.82 um
17-03-18 02:20:14.116 -07 000000610 INF: FPGA: Xmit ZDACW 36512\n [Z Motor]
17-03-18 02:20:14.116 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 02:20:14.126 -07 000000610 INF: FPGA: 'ZDACW 36512' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:14.126 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:14.126 -07 000000502 INF: FPGA: Recv ZDACR 36512
17-03-18 02:20:14.136 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.136 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:14.286 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.286 -07 000000591 INF: FPGA: Recv ZSGSRD 35303
17-03-18 02:20:14.296 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:14.296 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.296 -07 000000569 INF: FPGA: Recv ZSGSRD 35314
17-03-18 02:20:14.306 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.306 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.306 -07 000000626 INF: FPGA: Recv ZSGSRD 35311
17-03-18 02:20:14.316 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.316 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.316 -07 000000561 INF: FPGA: Recv ZSGSRD 35306
17-03-18 02:20:14.326 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.326 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.326 -07 000000462 INF: FPGA: Recv ZSGSRD 35310
17-03-18 02:20:14.336 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.336 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.336 -07 000000424 INF: FPGA: Recv ZSGSRD 35309
17-03-18 02:20:14.346 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.346 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.346 -07 000000618 INF: FPGA: Recv ZSGSRD 35304
17-03-18 02:20:14.356 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:14.356 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.356 -07 000000467 INF: FPGA: Recv ZSGSRD 35307
17-03-18 02:20:14.366 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.366 -07 000000512 INF: FPGA: Recv ZSGSRD 35308
17-03-18 02:20:14.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.376 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:14.376 -07 000000576 INF: FPGA: Recv ZSGSRD 35312
17-03-18 02:20:14.386 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.386 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:14.386 -07 000000424 INF: FPGA: Recv ZPIEZORD 31056
17-03-18 02:20:14.396 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:14.396 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.571 V. Piezo Error = -9.4 V.
17-03-18 02:20:14.396 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35308 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35308 (-166.3 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35303 (-166.2 uncal um), Max = 35314 (-166.3 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:20:14.396 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35308, posNoise = 6, negNoise = 5
17-03-18 02:20:14.396 -07 000000610 INF: Z Motor: After move to -0.167141, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:14.396 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 02:20:14.396 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:14.396 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:14.396 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:14.396 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:14.396 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:14.396 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:14.396 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:14.396 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:14.396 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:14.396 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:14.396 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:14.396 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:14.406 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:14.406 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:14.406 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:14.406 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:14.416 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 02:20:14.416 -07 000000444 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 02:20:14.416 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 02:20:14.416 -07 000000561 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 02:20:14.416 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36688 150\n [Camera]
17-03-18 02:20:14.616 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:15.016 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:15.016 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:15.016 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:15.016 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:15.016 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:15.016 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:15.016 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:15.016 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:20:15.026 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:15.026 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:20:15.206 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36688 779
17-03-18 02:20:15.356 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:15.396 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 02:20:15.396 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:20:15.396 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:15.396 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 02:20:15.396 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 02:20:15.396 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:15.406 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:15.406 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 02:20:15.406 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:15.416 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 02:20:15.546 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:15.546 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:15.546 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:15.546 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:15.546 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:15.546 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:15.546 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:15.546 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:20:15.556 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:15.556 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 02:20:15.736 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:15.736 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:15.736 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36688 150' command took 2 ms to send, 1314 ms to get response, and 1321 ms overall
17-03-18 02:20:15.736 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.167930
17-03-18 02:20:15.736 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.16793 mm
17-03-18 02:20:15.736 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:15.746 -07 000000461 INF: Z Motor: Entering MoveAbsStepped (DAC = 36684, sync = True, waitForSettling = False)
17-03-18 02:20:15.746 -07 000000461 INF: Z Motor: Moving to -0.167929 mm, started at -0.167149 mm, distance = -0.78 um
17-03-18 02:20:15.746 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 02:20:15.746 -07 000000561 INF: Y Motor: Moving to 71.5326 mm, started at 70.6880 mm, delta = 0.8446 mm
17-03-18 02:20:15.746 -07 000000461 INF: FPGA: Xmit ZDACW 36684\n [Z Motor]
17-03-18 02:20:15.746 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 02:20:15.756 -07 000000461 INF: FPGA: 'ZDACW 36684' command took 1 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:15.756 -07 000000461 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:15.756 -07 000000618 INF: FPGA: Recv ZDACR 36684
17-03-18 02:20:15.766 -07 000000461 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:15.766 -07 000000461 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 02:20:15.766 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:15.766 -07 000000629 INF: FPGA: Recv YRDPOS 144769
17-03-18 02:20:15.776 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 02:20:15.776 -07 000000561 INF: Y Motor: Encoder = 144769 = motor step 113100.8 = 70.6880 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:15.776 -07 000000561 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:15.776 -07 000000561 INF: Y Motor: Moving 1351 steps-31
17-03-18 02:20:15.776 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:15.936 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 02:20:15.936 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 02:20:15.936 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:15.936 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 02:20:15.936 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 02:20:15.936 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:15.936 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:15.936 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 02:20:15.936 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:15.946 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 02:20:16.146 -07 000000590 INF: FPGA: Recv YMVTILE
17-03-18 02:20:16.146 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 02:20:16.196 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:16.196 -07 000000606 INF: FPGA: Recv YRDPOS 146469
17-03-18 02:20:16.206 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:20:16.206 -07 000000561 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:16.206 -07 000000561 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 02:20:16.206 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.845 mm, average velocity = 2.234 mm/sec
17-03-18 02:20:16.466 -07 000000629 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:16.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:16.526 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.000345,
17-03-18 02:20:17.156 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:17.156 -07 000000569 INF: FPGA: Recv YRDPOS 146469
17-03-18 02:20:17.166 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:17.166 -07 000000561 INF: Y Motor: Encoder = 146469 = motor step 114428.9 = 71.5181 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:17.186 -07 000000561 INF: Y Motor: After move to 71.532608, error = -0.014542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:17.186 -07 000000561 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:17.186 -07 000000561 INF: Y Motor: Moved to 71.5181 after 1446 ms (table move)
17-03-18 02:20:17.196 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167929 mm (DAC = 36684)
17-03-18 02:20:17.196 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.196 -07 000000626 INF: FPGA: Recv ZSGSRD 35429
17-03-18 02:20:17.206 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.206 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.206 -07 000000430 INF: FPGA: Recv ZSGSRD 35435
17-03-18 02:20:17.216 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.216 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.216 -07 000000629 INF: FPGA: Recv ZSGSRD 35436
17-03-18 02:20:17.226 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.226 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.226 -07 000000444 INF: FPGA: Recv ZSGSRD 35428
17-03-18 02:20:17.236 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.236 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.236 -07 000000606 INF: FPGA: Recv ZSGSRD 35436
17-03-18 02:20:17.246 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.246 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.246 -07 000000501 INF: FPGA: Recv ZSGSRD 35431
17-03-18 02:20:17.256 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.256 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.256 -07 000000591 INF: FPGA: Recv ZSGSRD 35429
17-03-18 02:20:17.266 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.266 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.266 -07 000000576 INF: FPGA: Recv ZSGSRD 35431
17-03-18 02:20:17.276 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.276 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.276 -07 000000569 INF: FPGA: Recv ZSGSRD 35430
17-03-18 02:20:17.286 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.286 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.286 -07 000000579 INF: FPGA: Recv ZSGSRD 35437
17-03-18 02:20:17.296 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.296 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:17.296 -07 000000455 INF: FPGA: Recv ZPIEZORD 31278
17-03-18 02:20:17.306 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.306 -07 000000610 INF: Z Motor: Piezo is near 46.8 V (nominally 0 to 100 V), expect near 56.0 V, since DAC is at 5.598 V. Piezo Error = -9.2 V.
17-03-18 02:20:17.306 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.9 um, Read 10 ADC samples: Avg = 35432 (-167.1 uncal um), Error = 0.9 uncal um, Median = 35431 (-167.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35428 (-167.1 uncal um), Max = 35437 (-167.1 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:20:17.306 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35432, posNoise = 5, negNoise = 4
17-03-18 02:20:17.306 -07 000000610 INF: Z Motor: After move to -0.167929, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:17.306 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 110 ms (allowed 150 ms), total time = 1559 ms
17-03-18 02:20:17.306 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:17.346 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1602 ms
17-03-18 02:20:17.346 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:17.346 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51806640625, Z-position -0.167946036618009. ----------
17-03-18 02:20:17.346 -07 000000610 INF: Cycle	98	Tile	15	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:17.346 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36508, sync = True, waitForSettling = True)
17-03-18 02:20:17.346 -07 000000610 INF: Z Motor: Moving to -0.167123 mm, started at -0.167946 mm, distance = 0.82 um
17-03-18 02:20:17.346 -07 000000610 INF: FPGA: Xmit ZDACW 36508\n [Z Motor]
17-03-18 02:20:17.346 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:20:17.356 -07 000000610 INF: FPGA: 'ZDACW 36508' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:17.356 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:17.356 -07 000000629 INF: FPGA: Recv ZDACR 36508
17-03-18 02:20:17.366 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.366 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:17.516 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.516 -07 000000444 INF: FPGA: Recv ZSGSRD 35305
17-03-18 02:20:17.526 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:17.526 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.526 -07 000000561 INF: FPGA: Recv ZSGSRD 35307
17-03-18 02:20:17.536 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.536 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.536 -07 000000462 INF: FPGA: Recv ZSGSRD 35308
17-03-18 02:20:17.546 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.546 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.546 -07 000000569 INF: FPGA: Recv ZSGSRD 35308
17-03-18 02:20:17.556 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.556 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.556 -07 000000629 INF: FPGA: Recv ZSGSRD 35304
17-03-18 02:20:17.566 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.566 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.566 -07 000000590 INF: FPGA: Recv ZSGSRD 35303
17-03-18 02:20:17.576 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.576 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.576 -07 000000579 INF: FPGA: Recv ZSGSRD 35303
17-03-18 02:20:17.586 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.586 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.586 -07 000000576 INF: FPGA: Recv ZSGSRD 35306
17-03-18 02:20:17.596 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.596 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.596 -07 000000501 INF: FPGA: Recv ZSGSRD 35308
17-03-18 02:20:17.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.606 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:17.606 -07 000000606 INF: FPGA: Recv ZSGSRD 35310
17-03-18 02:20:17.616 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.616 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:17.616 -07 000000444 INF: FPGA: Recv ZPIEZORD 31086
17-03-18 02:20:17.626 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:17.626 -07 000000610 INF: Z Motor: Piezo is near 46.4 V (nominally 0 to 100 V), expect near 55.7 V, since DAC is at 5.571 V. Piezo Error = -9.3 V.
17-03-18 02:20:17.626 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.1 um, Read 10 ADC samples: Avg = 35306 (-166.3 uncal um), Error = 0.9 uncal um, Median = 35306 (-166.3 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 35303 (-166.2 uncal um), Max = 35310 (-166.3 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:20:17.626 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35306, posNoise = 4, negNoise = 3
17-03-18 02:20:17.626 -07 000000610 INF: Z Motor: After move to -0.167123, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:17.626 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:20:17.626 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:17.626 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:17.626 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:17.626 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:17.626 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:17.626 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:17.626 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:17.626 -07 000000462 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:17.626 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:17.626 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:17.626 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:17.626 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:17.636 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:17.636 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:17.636 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:17.636 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:17.646 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 02:20:17.646 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:20:17.646 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 02:20:17.646 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:20:17.646 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36684 150\n [Camera]
17-03-18 02:20:17.846 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:18.246 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:18.246 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:18.246 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:18.246 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:18.246 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:18.246 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:18.256 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:18.256 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 02:20:18.256 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:18.256 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 02:20:18.436 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36684 779
17-03-18 02:20:18.586 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:18.756 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 499 ms.
17-03-18 02:20:18.756 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 499 ms.
17-03-18 02:20:18.756 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:18.756 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 502 ms.
17-03-18 02:20:18.756 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 504 ms.
17-03-18 02:20:18.756 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:18.766 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:18.766 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:18.766 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 518 ms.
17-03-18 02:20:18.766 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 521 ms.
17-03-18 02:20:18.776 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:18.776 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:18.776 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:18.776 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:18.776 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:18.776 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:18.786 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:18.786 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:20:18.786 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:18.786 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:20:18.966 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:18.966 -07 000000430 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:18.966 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36684 150' command took 2 ms to send, 1306 ms to get response, and 1317 ms overall
17-03-18 02:20:18.966 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.167508
17-03-18 02:20:18.966 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.16751 mm
17-03-18 02:20:18.966 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:18.976 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 02:20:18.976 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 36592, sync = True, waitForSettling = False)
17-03-18 02:20:18.976 -07 000000618 INF: Z Motor: Moving to -0.167507 mm, started at -0.167137 mm, distance = -0.37 um
17-03-18 02:20:18.976 -07 000000618 INF: FPGA: Xmit ZDACW 36592\n [Z Motor]
17-03-18 02:20:18.976 -07 000000455 INF: Y Motor: Moving to 72.3626 mm, started at 71.5181 mm, delta = 0.8445 mm
17-03-18 02:20:18.976 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:20:18.986 -07 000000618 INF: FPGA: 'ZDACW 36592' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:18.986 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:18.986 -07 000000501 INF: FPGA: Recv ZDACR 36592
17-03-18 02:20:18.996 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:18.996 -07 000000618 INF: Z Motor: MoveAbsStepped took 19 ms (did NOT wait for settling yet))
17-03-18 02:20:18.996 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:18.996 -07 000000579 INF: FPGA: Recv YRDPOS 146470
17-03-18 02:20:19.006 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 02:20:19.006 -07 000000455 INF: Y Motor: Encoder = 146470 = motor step 114429.7 = 71.5186 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:19.006 -07 000000455 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:19.006 -07 000000455 INF: Y Motor: Moving 1350 steps-30
17-03-18 02:20:19.006 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:19.156 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 370 ms.
17-03-18 02:20:19.156 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 370 ms.
17-03-18 02:20:19.156 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:19.156 -07 000000424 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:20:19.156 -07 000000424 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 02:20:19.156 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:19.166 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:19.166 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:19.166 -07 000000424 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:20:19.166 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 02:20:19.386 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 02:20:19.386 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 373 ms to get response, and 378 ms overall
17-03-18 02:20:19.426 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:19.436 -07 000000591 INF: FPGA: Recv YRDPOS 148171
17-03-18 02:20:19.436 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 3 ms to get response, and 4 ms overall
17-03-18 02:20:19.436 -07 000000455 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:19.436 -07 000000455 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 02:20:19.436 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.845 mm, average velocity = 2.234 mm/sec
17-03-18 02:20:20.386 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:20.386 -07 000000467 INF: FPGA: Recv YRDPOS 148171
17-03-18 02:20:20.396 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:20.396 -07 000000455 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:20.416 -07 000000455 INF: Y Motor: After move to 72.362610, error = -0.013489, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:20.416 -07 000000455 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:20.416 -07 000000455 INF: Y Motor: Moved to 72.3491 after 1446 ms (table move)
17-03-18 02:20:20.426 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.167507 mm (DAC = 36592)
17-03-18 02:20:20.426 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.426 -07 000000444 INF: FPGA: Recv ZSGSRD 35365
17-03-18 02:20:20.436 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:20.436 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.436 -07 000000424 INF: FPGA: Recv ZSGSRD 35362
17-03-18 02:20:20.446 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.446 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.446 -07 000000430 INF: FPGA: Recv ZSGSRD 35369
17-03-18 02:20:20.456 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.456 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.456 -07 000000561 INF: FPGA: Recv ZSGSRD 35363
17-03-18 02:20:20.466 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.466 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.466 -07 000000455 INF: FPGA: Recv ZSGSRD 35365
17-03-18 02:20:20.476 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.476 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.476 -07 000000444 INF: FPGA: Recv ZSGSRD 35366
17-03-18 02:20:20.486 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.486 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.486 -07 000000606 INF: FPGA: Recv ZSGSRD 35367
17-03-18 02:20:20.496 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.496 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.496 -07 000000576 INF: FPGA: Recv ZSGSRD 35363
17-03-18 02:20:20.506 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.506 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.506 -07 000000561 INF: FPGA: Recv ZSGSRD 35366
17-03-18 02:20:20.516 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.516 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.516 -07 000000626 INF: FPGA: Recv ZSGSRD 35371
17-03-18 02:20:20.526 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.526 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:20.526 -07 000000618 INF: FPGA: Recv ZPIEZORD 31177
17-03-18 02:20:20.536 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.536 -07 000000610 INF: Z Motor: Piezo is near 46.6 V (nominally 0 to 100 V), expect near 55.8 V, since DAC is at 5.584 V. Piezo Error = -9.2 V.
17-03-18 02:20:20.536 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -167.5 um, Read 10 ADC samples: Avg = 35366 (-166.7 uncal um), Error = 0.9 uncal um, Median = 35366 (-166.7 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 35362 (-166.6 uncal um), Max = 35371 (-166.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:20:20.536 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35366, posNoise = 5, negNoise = 4
17-03-18 02:20:20.536 -07 000000610 INF: Z Motor: After move to -0.167507, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:20.536 -07 000000610 INF: Z Motor: Settle wait time = 1450 ms, measure time = 109 ms (allowed 150 ms), total time = 1559 ms
17-03-18 02:20:20.536 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:20.586 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1611 ms
17-03-18 02:20:20.586 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:20.586 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.34912109375, Z-position -0.167522038616653. ----------
17-03-18 02:20:20.586 -07 000000610 INF: Cycle	98	Tile	16	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:20.586 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36415, sync = True, waitForSettling = True)
17-03-18 02:20:20.586 -07 000000610 INF: Z Motor: Moving to -0.166697 mm, started at -0.167522 mm, distance = 0.82 um
17-03-18 02:20:20.586 -07 000000610 INF: FPGA: Xmit ZDACW 36415\n [Z Motor]
17-03-18 02:20:20.586 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:20:20.596 -07 000000610 INF: FPGA: 'ZDACW 36415' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:20.596 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:20.596 -07 000000591 INF: FPGA: Recv ZDACR 36415
17-03-18 02:20:20.606 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.606 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:20.756 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.756 -07 000000579 INF: FPGA: Recv ZSGSRD 35238
17-03-18 02:20:20.766 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:20.766 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.766 -07 000000629 INF: FPGA: Recv ZSGSRD 35244
17-03-18 02:20:20.776 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.776 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.776 -07 000000444 INF: FPGA: Recv ZSGSRD 35248
17-03-18 02:20:20.786 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.786 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.786 -07 000000569 INF: FPGA: Recv ZSGSRD 35232
17-03-18 02:20:20.796 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.796 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.796 -07 000000424 INF: FPGA: Recv ZSGSRD 35238
17-03-18 02:20:20.806 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.806 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.806 -07 000000561 INF: FPGA: Recv ZSGSRD 35242
17-03-18 02:20:20.816 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.816 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.816 -07 000000455 INF: FPGA: Recv ZSGSRD 35240
17-03-18 02:20:20.826 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.826 -07 000000467 INF: FPGA: Recv ZSGSRD 35235
17-03-18 02:20:20.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.836 -07 000000606 INF: FPGA: Recv ZSGSRD 35233
17-03-18 02:20:20.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:20.846 -07 000000590 INF: FPGA: Recv ZSGSRD 35247
17-03-18 02:20:20.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.856 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:20.856 -07 000000512 INF: FPGA: Recv ZPIEZORD 30997
17-03-18 02:20:20.866 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:20.866 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.557 V. Piezo Error = -9.3 V.
17-03-18 02:20:20.866 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.7 um, Read 10 ADC samples: Avg = 35240 (-165.8 uncal um), Error = 0.9 uncal um, Median = 35239 (-165.8 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 35232 (-165.8 uncal um), Max = 35248 (-165.9 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:20:20.866 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35240, posNoise = 8, negNoise = 8
17-03-18 02:20:20.866 -07 000000610 INF: Z Motor: After move to -0.166697, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:20.866 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:20:20.866 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:20.866 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:20.866 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:20.866 -07 000000501 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:20.866 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:20.866 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:20.866 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:20.866 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:20.866 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:20.866 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 2 ms.
17-03-18 02:20:20.866 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:20.866 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:20.876 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:20.876 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:20.876 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:20.876 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:20.886 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:20:20.886 -07 000000576 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 23 ms.
17-03-18 02:20:20.896 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 17 ms.
17-03-18 02:20:20.896 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 24 ms.
17-03-18 02:20:20.896 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36592 150\n [Camera]
17-03-18 02:20:21.096 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:21.466 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:21.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:21.486 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:21.486 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:21.486 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:21.486 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:21.486 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:21.496 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:21.496 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:21.496 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:20:21.496 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:21.496 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 02:20:21.676 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36592 779
17-03-18 02:20:21.826 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:21.886 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.99219,
17-03-18 02:20:21.886 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 02:20:21.886 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 02:20:21.886 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 02:20:21.886 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:21.886 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 02:20:21.886 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:21.896 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 02:20:21.896 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 02:20:21.896 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 404 ms.
17-03-18 02:20:21.906 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 02:20:22.016 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:22.016 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:22.016 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:22.016 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:22.016 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 02:20:22.026 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:22.026 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:22.026 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:22.026 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:22.026 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 02:20:22.206 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:22.216 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:22.216 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36592 150' command took 2 ms to send, 1310 ms to get response, and 1317 ms overall
17-03-18 02:20:22.216 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 0 - Best Z for this model is: -0.172880
17-03-18 02:20:22.216 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.34912109375, Z-Position -0.166712587886791. ------
17-03-18 02:20:22.216 -07 000000455 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:22.216 -07 000000467 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.17326 mm
17-03-18 02:20:22.216 -07 000000467 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:22.216 -07 000000591 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:22.226 -07 000000455 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:22.226 -07 000000626 INF: Z Motor: Entering MoveAbsStepped (DAC = 37848, sync = True, waitForSettling = False)
17-03-18 02:20:22.226 -07 000000626 INF: Z Motor: Moving to -0.173257 mm, started at -0.166713 mm, distance = -6.54 um
17-03-18 02:20:22.226 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 02:20:22.226 -07 000000618 INF: Y Motor: Moving to 73.1926 mm, started at 72.3491 mm, delta = 0.8435 mm
17-03-18 02:20:22.226 -07 000000455 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:20:22.236 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:22.236 -07 000000561 INF: FPGA: Recv YRDPOS 148171
17-03-18 02:20:22.246 -07 000000626 INF: FPGA: Xmit ZDACW 37848\n [Z Motor]
17-03-18 02:20:22.246 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 02:20:22.246 -07 000000618 INF: Y Motor: Encoder = 148171 = motor step 115758.6 = 72.3491 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:22.246 -07 000000618 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:22.246 -07 000000618 INF: Y Motor: Moving 1350 steps-28
17-03-18 02:20:22.246 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 02:20:22.256 -07 000000626 INF: FPGA: 'ZDACW 37848' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 02:20:22.256 -07 000000626 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:22.256 -07 000000569 INF: FPGA: Recv ZDACR 37848
17-03-18 02:20:22.266 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:22.266 -07 000000626 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:22.266 -07 000000626 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 02:20:22.406 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 02:20:22.426 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 02:20:22.426 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 02:20:22.426 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:22.426 -07 000000424 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:20:22.426 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 02:20:22.426 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:22.426 -07 000000455 INF: FPGA: 'FOCMRRFOC' command took 1 ms to send, 197 ms to get response, and 206 ms overall
17-03-18 02:20:22.436 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 8 ms.
17-03-18 02:20:22.436 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 02:20:22.436 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 417 ms.
17-03-18 02:20:22.446 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 421 ms.
17-03-18 02:20:22.636 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 02:20:22.636 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:20:22.686 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:22.686 -07 000000591 INF: FPGA: Recv YRDPOS 149863
17-03-18 02:20:22.696 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:22.696 -07 000000618 INF: Y Motor: Encoder = 149863 = motor step 117080.5 = 73.1753 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:22.696 -07 000000618 INF: Y Motor: Position error before settling (table move) = -35 encoder counts (-0.017 mm)
17-03-18 02:20:22.696 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.119 mm/sec
17-03-18 02:20:23.646 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:23.646 -07 000000501 INF: FPGA: Recv YRDPOS 149864
17-03-18 02:20:23.656 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:23.656 -07 000000618 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:23.676 -07 000000618 INF: Y Motor: After move to 73.192604, error = -0.016823, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:23.676 -07 000000618 INF: Y Motor: Position error after settling (table move) = -34 encoder counts (-0.017 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:20:23.676 -07 000000618 INF: Y Motor: Moved to 73.1758 after 1456 ms (table move)
17-03-18 02:20:23.686 -07 000000467 INF: Z Motor: EndOfMoveAbsStepped: target = -0.173257 mm (DAC = 37848)
17-03-18 02:20:23.686 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.686 -07 000000424 INF: FPGA: Recv ZSGSRD 36259
17-03-18 02:20:23.696 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:23.696 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.696 -07 000000591 INF: FPGA: Recv ZSGSRD 36258
17-03-18 02:20:23.706 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.706 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.706 -07 000000576 INF: FPGA: Recv ZSGSRD 36259
17-03-18 02:20:23.716 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.716 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.716 -07 000000590 INF: FPGA: Recv ZSGSRD 36266
17-03-18 02:20:23.726 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.726 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.726 -07 000000618 INF: FPGA: Recv ZSGSRD 36265
17-03-18 02:20:23.736 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.736 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.736 -07 000000424 INF: FPGA: Recv ZSGSRD 36265
17-03-18 02:20:23.746 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.746 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.746 -07 000000569 INF: FPGA: Recv ZSGSRD 36257
17-03-18 02:20:23.756 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.756 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.756 -07 000000576 INF: FPGA: Recv ZSGSRD 36255
17-03-18 02:20:23.766 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.766 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.766 -07 000000590 INF: FPGA: Recv ZSGSRD 36266
17-03-18 02:20:23.776 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.776 -07 000000467 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:23.776 -07 000000618 INF: FPGA: Recv ZSGSRD 36256
17-03-18 02:20:23.786 -07 000000467 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.786 -07 000000467 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:23.786 -07 000000444 INF: FPGA: Recv ZPIEZORD 32384
17-03-18 02:20:23.796 -07 000000467 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:23.796 -07 000000467 INF: Z Motor: Piezo is near 49.2 V (nominally 0 to 100 V), expect near 57.8 V, since DAC is at 5.775 V. Piezo Error = -8.6 V.
17-03-18 02:20:23.796 -07 000000467 INF: Z Motor: ReadAdcAverage: Commanded Z = -173.3 um, Read 10 ADC samples: Avg = 36261 (-172.4 uncal um), Error = 0.9 uncal um, Median = 36259 (-172.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 36255 (-172.4 uncal um), Max = 36266 (-172.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:23.796 -07 000000467 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 36261, posNoise = 5, negNoise = 6
17-03-18 02:20:23.796 -07 000000467 INF: Z Motor: After move to -0.173257, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:23.796 -07 000000467 INF: Z Motor: Settle wait time = 1459 ms, measure time = 110 ms (allowed 150 ms), total time = 1569 ms
17-03-18 02:20:23.796 -07 000000467 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:23.836 -07 000000467 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1615 ms
17-03-18 02:20:23.836 -07 000000467 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:23.836 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:23.836 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:23.836 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:23.836 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:23.836 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:20:23.836 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:23.836 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:23.836 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:20:23.846 -07 000000455 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:23.846 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:20:23.856 -07 000000455 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 02:20:23.856 -07 000000455 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 02:20:23.856 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:20:23.906 -07 000000606 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:20:24.206 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:20:24.206 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:20:24.206 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:20:24.206 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) start.
17-03-18 02:20:24.246 -07 000000591 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:20:24.246 -07 000000561 INF: FPGA: Recv CAMSNAP
17-03-18 02:20:24.246 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 2 ms to send, 381 ms to get response, and 384 ms overall
17-03-18 02:20:24.326 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 02:20:24.326 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:24.336 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 02:20:24.336 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 02:20:24.346 -07 000000467 INF: Autofocus start
17-03-18 02:20:24.346 -07 000000467 INF: MeasureProfile start
17-03-18 02:20:24.346 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:24.346 -07 000000444 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:24.356 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:24.356 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:20:24.356 -07 000000467 INF: MeasureProfile done
17-03-18 02:20:24.356 -07 000000467 INF: X=32  Z correction [um]=0.09220707
17-03-18 02:20:24.356 -07 000000467 INF: Autofocus finished
17-03-18 02:20:24.556 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:20:24.556 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:20:24.556 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17578125, Z-position -0.173271708483529. ----------
17-03-18 02:20:24.556 -07 000000610 INF: Cycle	98	Tile	17	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:24.566 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36381, sync = True, waitForSettling = True)
17-03-18 02:20:24.566 -07 000000610 INF: Z Motor: Moving to -0.166542 mm, started at -0.173272 mm, distance = 6.73 um
17-03-18 02:20:24.566 -07 000000610 INF: FPGA: Xmit ZDACW 36381\n [Z Motor]
17-03-18 02:20:24.566 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 02:20:24.576 -07 000000610 INF: FPGA: 'ZDACW 36381' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.576 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:24.576 -07 000000629 INF: FPGA: Recv ZDACR 36381
17-03-18 02:20:24.586 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.586 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:24.736 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.736 -07 000000512 INF: FPGA: Recv ZSGSRD 35217
17-03-18 02:20:24.746 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.746 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.746 -07 000000606 INF: FPGA: Recv ZSGSRD 35219
17-03-18 02:20:24.756 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.756 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.756 -07 000000455 INF: FPGA: Recv ZSGSRD 35215
17-03-18 02:20:24.766 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.766 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.766 -07 000000461 INF: FPGA: Recv ZSGSRD 35221
17-03-18 02:20:24.776 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.776 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.776 -07 000000561 INF: FPGA: Recv ZSGSRD 35213
17-03-18 02:20:24.786 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.786 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.786 -07 000000501 INF: FPGA: Recv ZSGSRD 35220
17-03-18 02:20:24.796 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.796 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.796 -07 000000430 INF: FPGA: Recv ZSGSRD 35214
17-03-18 02:20:24.806 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.806 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.806 -07 000000618 INF: FPGA: Recv ZSGSRD 35210
17-03-18 02:20:24.816 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.816 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.816 -07 000000467 INF: FPGA: Recv ZSGSRD 35216
17-03-18 02:20:24.826 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:24.826 -07 000000424 INF: FPGA: Recv ZSGSRD 35211
17-03-18 02:20:24.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.836 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:24.836 -07 000000591 INF: FPGA: Recv ZPIEZORD 30966
17-03-18 02:20:24.846 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:24.846 -07 000000610 INF: Z Motor: Piezo is near 46.2 V (nominally 0 to 100 V), expect near 55.5 V, since DAC is at 5.551 V. Piezo Error = -9.4 V.
17-03-18 02:20:24.846 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.5 um, Read 10 ADC samples: Avg = 35216 (-165.7 uncal um), Error = 0.8 uncal um, Median = 35216 (-165.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 35210 (-165.7 uncal um), Max = 35221 (-165.7 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:24.846 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35216, posNoise = 5, negNoise = 6
17-03-18 02:20:24.846 -07 000000610 INF: Z Motor: After move to -0.166542, error = -0.000017, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:24.846 -07 000000610 INF: Z Motor: MoveAbsStepped took 281 ms)
17-03-18 02:20:24.846 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:24.846 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:24.846 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:24.846 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:24.846 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:24.846 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:24.846 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:24.846 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:24.846 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:24.846 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:24.846 -07 000000424 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:24.846 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:24.856 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:24.856 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:24.856 -07 000000424 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:24.856 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:24.866 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 02:20:24.866 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 02:20:24.866 -07 000000424 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 10 ms.
17-03-18 02:20:24.866 -07 000000424 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 02:20:24.866 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36558 150\n [Camera]
17-03-18 02:20:25.066 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:25.456 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:25.456 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:25.456 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:25.456 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:25.456 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:20:25.466 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:25.466 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:25.466 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:25.466 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:25.466 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:20:25.656 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36558 779
17-03-18 02:20:25.796 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:25.846 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 02:20:25.846 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 02:20:25.846 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:20:25.846 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:25.846 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 02:20:25.846 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:25.846 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:25.846 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 390 ms.
17-03-18 02:20:25.846 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:25.856 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 02:20:25.986 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:25.986 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:25.996 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:26.116 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:26.116 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:26.126 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:26.126 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:26.126 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:20:26.126 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:26.126 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:20:26.186 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:26.186 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:26.186 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36558 150' command took 2 ms to send, 1311 ms to get response, and 1317 ms overall
17-03-18 02:20:26.186 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.166774
17-03-18 02:20:26.186 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.16677 mm
17-03-18 02:20:26.186 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:26.186 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 02:20:26.186 -07 000000444 INF: Y Motor: Moving to 74.0226 mm, started at 73.1758 mm, delta = 0.8468 mm
17-03-18 02:20:26.186 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:26.186 -07 000000455 INF: Z Motor: Entering MoveAbsStepped (DAC = 36432, sync = True, waitForSettling = False)
17-03-18 02:20:26.186 -07 000000455 INF: Z Motor: Moving to -0.166775 mm, started at -0.166558 mm, distance = -0.22 um
17-03-18 02:20:26.186 -07 000000579 INF: FPGA: Recv YRDPOS 149864
17-03-18 02:20:26.196 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:26.196 -07 000000444 INF: Y Motor: Encoder = 149864 = motor step 117081.3 = 73.1758 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:26.196 -07 000000444 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:26.196 -07 000000444 INF: Y Motor: Moving 1355 steps-35
17-03-18 02:20:26.196 -07 000000455 INF: FPGA: Xmit ZDACW 36432\n [Z Motor]
17-03-18 02:20:26.196 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 02:20:26.206 -07 000000455 INF: FPGA: 'ZDACW 36432' command took 1 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 02:20:26.206 -07 000000455 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:26.206 -07 000000461 INF: FPGA: Recv ZDACR 36432
17-03-18 02:20:26.216 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:26.216 -07 000000455 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:26.216 -07 000000455 INF: Z Motor: MoveAbsStepped took 23 ms (did NOT wait for settling yet))
17-03-18 02:20:26.466 -07 000000462 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:26.466 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:26.506 -07 000000618 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 02:20:26.506 -07 000000618 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 02:20:26.506 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:26.506 -07 000000512 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:20:26.506 -07 000000512 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 02:20:26.506 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:26.506 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 6 ms.
17-03-18 02:20:26.516 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:26.516 -07 000000512 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 520 ms.
17-03-18 02:20:26.516 -07 000000618 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 02:20:26.586 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 02:20:26.586 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:20:26.626 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:26.626 -07 000000462 INF: FPGA: Recv YRDPOS 151568
17-03-18 02:20:26.636 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:26.636 -07 000000444 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:26.636 -07 000000444 INF: Y Motor: Position error before settling (table move) = -30 encoder counts (-0.015 mm)
17-03-18 02:20:26.636 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.847 mm, average velocity = 2.128 mm/sec
17-03-18 02:20:27.246 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.993549,
17-03-18 02:20:27.586 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:27.586 -07 000000576 INF: FPGA: Recv YRDPOS 151568
17-03-18 02:20:27.596 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.596 -07 000000444 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:27.616 -07 000000444 INF: Y Motor: After move to 74.022606, error = -0.014793, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:27.616 -07 000000444 INF: Y Motor: Position error after settling (table move) = -30 encoder counts (-0.015 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:27.616 -07 000000444 INF: Y Motor: Moved to 74.0078 after 1424 ms (table move)
17-03-18 02:20:27.616 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.166775 mm (DAC = 36432)
17-03-18 02:20:27.616 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.616 -07 000000569 INF: FPGA: Recv ZSGSRD 35252
17-03-18 02:20:27.626 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:27.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.626 -07 000000462 INF: FPGA: Recv ZSGSRD 35249
17-03-18 02:20:27.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.636 -07 000000455 INF: FPGA: Recv ZSGSRD 35248
17-03-18 02:20:27.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.646 -07 000000569 INF: FPGA: Recv ZSGSRD 35254
17-03-18 02:20:27.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.656 -07 000000424 INF: FPGA: Recv ZSGSRD 35251
17-03-18 02:20:27.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.666 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.666 -07 000000626 INF: FPGA: Recv ZSGSRD 35254
17-03-18 02:20:27.676 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.676 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.676 -07 000000576 INF: FPGA: Recv ZSGSRD 35249
17-03-18 02:20:27.686 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.686 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.686 -07 000000606 INF: FPGA: Recv ZSGSRD 35250
17-03-18 02:20:27.696 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.696 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.696 -07 000000579 INF: FPGA: Recv ZSGSRD 35249
17-03-18 02:20:27.706 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.706 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.706 -07 000000424 INF: FPGA: Recv ZSGSRD 35251
17-03-18 02:20:27.716 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.716 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:27.716 -07 000000591 INF: FPGA: Recv ZPIEZORD 31025
17-03-18 02:20:27.726 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.726 -07 000000610 INF: Z Motor: Piezo is near 46.3 V (nominally 0 to 100 V), expect near 55.6 V, since DAC is at 5.559 V. Piezo Error = -9.3 V.
17-03-18 02:20:27.726 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.8 um, Read 10 ADC samples: Avg = 35251 (-165.9 uncal um), Error = 0.9 uncal um, Median = 35250 (-165.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 6 (0.0 uncal um), Min = 35248 (-165.9 uncal um), Max = 35254 (-165.9 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:20:27.726 -07 000000610 INF: Z Motor: ADC noise = 3, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35251, posNoise = 3, negNoise = 3
17-03-18 02:20:27.726 -07 000000610 INF: Z Motor: After move to -0.166775, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:27.726 -07 000000610 INF: Z Motor: Settle wait time = 1426 ms, measure time = 107 ms (allowed 150 ms), total time = 1533 ms
17-03-18 02:20:27.726 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:27.776 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1586 ms
17-03-18 02:20:27.776 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:27.776 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.0078125, Z-position -0.16678325422035. ----------
17-03-18 02:20:27.776 -07 000000610 INF: Cycle	98	Tile	18	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:27.776 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36255, sync = True, waitForSettling = True)
17-03-18 02:20:27.776 -07 000000610 INF: Z Motor: Moving to -0.165965 mm, started at -0.166783 mm, distance = 0.82 um
17-03-18 02:20:27.776 -07 000000610 INF: FPGA: Xmit ZDACW 36255\n [Z Motor]
17-03-18 02:20:27.776 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:20:27.786 -07 000000610 INF: FPGA: 'ZDACW 36255' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:27.786 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:27.786 -07 000000430 INF: FPGA: Recv ZDACR 36255
17-03-18 02:20:27.796 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.796 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:27.946 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.946 -07 000000467 INF: FPGA: Recv ZSGSRD 35127
17-03-18 02:20:27.956 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:27.956 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.956 -07 000000606 INF: FPGA: Recv ZSGSRD 35131
17-03-18 02:20:27.966 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.966 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.966 -07 000000618 INF: FPGA: Recv ZSGSRD 35129
17-03-18 02:20:27.976 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.976 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.976 -07 000000629 INF: FPGA: Recv ZSGSRD 35125
17-03-18 02:20:27.986 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.986 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.986 -07 000000591 INF: FPGA: Recv ZSGSRD 35125
17-03-18 02:20:27.996 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:27.996 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:27.996 -07 000000461 INF: FPGA: Recv ZSGSRD 35125
17-03-18 02:20:28.006 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:28.006 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:28.006 -07 000000502 INF: FPGA: Recv ZSGSRD 35123
17-03-18 02:20:28.016 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:28.016 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:28.016 -07 000000626 INF: FPGA: Recv ZSGSRD 35124
17-03-18 02:20:28.026 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:28.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:28.026 -07 000000430 INF: FPGA: Recv ZSGSRD 35121
17-03-18 02:20:28.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:28.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:28.036 -07 000000455 INF: FPGA: Recv ZSGSRD 35123
17-03-18 02:20:28.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:28.046 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:28.046 -07 000000444 INF: FPGA: Recv ZPIEZORD 30866
17-03-18 02:20:28.056 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:28.056 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.532 V. Piezo Error = -9.4 V.
17-03-18 02:20:28.056 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -166.0 um, Read 10 ADC samples: Avg = 35125 (-165.1 uncal um), Error = 0.9 uncal um, Median = 35125 (-165.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 35121 (-165.1 uncal um), Max = 35131 (-165.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:20:28.056 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35125, posNoise = 6, negNoise = 4
17-03-18 02:20:28.056 -07 000000610 INF: Z Motor: After move to -0.165965, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:28.056 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:20:28.056 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:28.056 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:28.056 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:28.056 -07 000000626 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:28.056 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:28.056 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:28.056 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:28.056 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:28.056 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:28.056 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:28.056 -07 000000629 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:28.056 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:28.056 -07 000000629 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:28.066 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:28.066 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:28.066 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:28.076 -07 000000629 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:20:28.076 -07 000000629 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:20:28.076 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:20:28.076 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:28.086 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36432 150\n [Camera]
17-03-18 02:20:28.276 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:28.676 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:28.676 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:28.676 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:28.676 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:28.676 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 02:20:28.676 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:28.676 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:28.676 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:28.676 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:28.676 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 02:20:28.866 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36432 779
17-03-18 02:20:29.016 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:29.056 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 02:20:29.056 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 02:20:29.056 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:29.056 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 02:20:29.056 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 377 ms.
17-03-18 02:20:29.056 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:29.056 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:29.056 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:29.056 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 02:20:29.066 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 02:20:29.206 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:29.206 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:29.206 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:29.326 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:29.326 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:29.326 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:29.326 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:29.326 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:20:29.326 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:29.336 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:20:29.396 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:29.396 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:29.396 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36432 150' command took 2 ms to send, 1307 ms to get response, and 1317 ms overall
17-03-18 02:20:29.396 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.165868
17-03-18 02:20:29.406 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.16587 mm
17-03-18 02:20:29.406 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:29.406 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 02:20:29.406 -07 000000462 INF: Y Motor: Moving to 74.8526 mm, started at 74.0078 mm, delta = 0.8448 mm
17-03-18 02:20:29.406 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:29.406 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 36234, sync = True, waitForSettling = False)
17-03-18 02:20:29.406 -07 000000430 INF: Z Motor: Moving to -0.165869 mm, started at -0.165974 mm, distance = 0.11 um
17-03-18 02:20:29.406 -07 000000512 INF: FPGA: Recv YRDPOS 151568
17-03-18 02:20:29.416 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:29.416 -07 000000462 INF: Y Motor: Encoder = 151568 = motor step 118412.5 = 74.0078 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:29.416 -07 000000462 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:29.416 -07 000000462 INF: Y Motor: Moving 1352 steps-30
17-03-18 02:20:29.416 -07 000000430 INF: FPGA: Xmit ZDACW 36234\n [Z Motor]
17-03-18 02:20:29.416 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 02:20:29.426 -07 000000430 INF: FPGA: 'ZDACW 36234' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:20:29.426 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:29.426 -07 000000579 INF: FPGA: Recv ZDACR 36234
17-03-18 02:20:29.436 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:29.436 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:29.436 -07 000000430 INF: Z Motor: MoveAbsStepped took 26 ms (did NOT wait for settling yet))
17-03-18 02:20:29.716 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 384 ms.
17-03-18 02:20:29.716 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:20:29.716 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:29.716 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 02:20:29.716 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 02:20:29.716 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:29.716 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:29.716 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 511 ms.
17-03-18 02:20:29.716 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:29.726 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 02:20:29.816 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 02:20:29.816 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 370 ms to get response, and 399 ms overall
17-03-18 02:20:29.836 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:29.846 -07 000000512 INF: FPGA: Recv YRDPOS 153254
17-03-18 02:20:29.846 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 02:20:29.846 -07 000000462 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:29.846 -07 000000462 INF: Y Motor: Position error before settling (table move) = -44 encoder counts (-0.021 mm)
17-03-18 02:20:29.846 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.845 mm, average velocity = 2.112 mm/sec
17-03-18 02:20:30.796 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:30.796 -07 000000444 INF: FPGA: Recv YRDPOS 153254
17-03-18 02:20:30.806 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.806 -07 000000462 INF: Y Motor: Encoder = 153254 = motor step 119729.7 = 74.8311 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:30.816 -07 000000462 INF: Y Motor: After move to 74.852608, error = -0.021553, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:30.816 -07 000000462 INF: Y Motor: Position error after settling (table move) = -44 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:30.816 -07 000000462 INF: Y Motor: Moved to 74.8311 after 1414 ms (table move)
17-03-18 02:20:30.826 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.165869 mm (DAC = 36234)
17-03-18 02:20:30.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.826 -07 000000512 INF: FPGA: Recv ZSGSRD 35124
17-03-18 02:20:30.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.836 -07 000000579 INF: FPGA: Recv ZSGSRD 35103
17-03-18 02:20:30.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.846 -07 000000626 INF: FPGA: Recv ZSGSRD 35114
17-03-18 02:20:30.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.856 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.856 -07 000000576 INF: FPGA: Recv ZSGSRD 35109
17-03-18 02:20:30.866 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.866 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.866 -07 000000462 INF: FPGA: Recv ZSGSRD 35115
17-03-18 02:20:30.876 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.876 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.876 -07 000000618 INF: FPGA: Recv ZSGSRD 35114
17-03-18 02:20:30.886 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.886 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.886 -07 000000461 INF: FPGA: Recv ZSGSRD 35103
17-03-18 02:20:30.896 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.896 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.896 -07 000000462 INF: FPGA: Recv ZSGSRD 35109
17-03-18 02:20:30.906 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.906 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.906 -07 000000561 INF: FPGA: Recv ZSGSRD 35104
17-03-18 02:20:30.916 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.916 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:30.916 -07 000000430 INF: FPGA: Recv ZSGSRD 35114
17-03-18 02:20:30.926 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.926 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:30.926 -07 000000424 INF: FPGA: Recv ZPIEZORD 30831
17-03-18 02:20:30.936 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.936 -07 000000610 INF: Z Motor: Piezo is near 45.9 V (nominally 0 to 100 V), expect near 55.3 V, since DAC is at 5.529 V. Piezo Error = -9.4 V.
17-03-18 02:20:30.936 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.9 um, Read 10 ADC samples: Avg = 35111 (-165.0 uncal um), Error = 0.8 uncal um, Median = 35112 (-165.0 uncal um), StdDev = 7 (0.0 uncal um), Range = 21 (0.1 uncal um), Min = 35103 (-165.0 uncal um), Max = 35124 (-165.1 uncal um), Pos Noise = 13 (0.1 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:20:30.936 -07 000000610 INF: Z Motor: ADC noise = 13, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 35111, posNoise = 13, negNoise = 8
17-03-18 02:20:30.936 -07 000000610 INF: Z Motor: After move to -0.165869, error = -0.000015, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:30.936 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 111 ms (allowed 150 ms), total time = 1527 ms
17-03-18 02:20:30.936 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:30.976 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1569 ms
17-03-18 02:20:30.976 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:30.976 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.8310546875, Z-position -0.165883864520504. ----------
17-03-18 02:20:30.976 -07 000000610 INF: Cycle	98	Tile	19	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:30.976 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 36057, sync = True, waitForSettling = True)
17-03-18 02:20:30.976 -07 000000610 INF: Z Motor: Moving to -0.165058 mm, started at -0.165884 mm, distance = 0.83 um
17-03-18 02:20:30.976 -07 000000610 INF: FPGA: Xmit ZDACW 36057\n [Z Motor]
17-03-18 02:20:30.976 -07 000000461 INF: FPGA: Recv ZDACW
17-03-18 02:20:30.986 -07 000000610 INF: FPGA: 'ZDACW 36057' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:30.986 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:30.986 -07 000000569 INF: FPGA: Recv ZDACR 36057
17-03-18 02:20:30.996 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:30.996 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:31.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.146 -07 000000502 INF: FPGA: Recv ZSGSRD 34984
17-03-18 02:20:31.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:31.156 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.156 -07 000000455 INF: FPGA: Recv ZSGSRD 34985
17-03-18 02:20:31.166 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.166 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.166 -07 000000444 INF: FPGA: Recv ZSGSRD 34989
17-03-18 02:20:31.176 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.176 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.176 -07 000000430 INF: FPGA: Recv ZSGSRD 34992
17-03-18 02:20:31.186 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.186 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.186 -07 000000591 INF: FPGA: Recv ZSGSRD 34978
17-03-18 02:20:31.196 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.196 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.196 -07 000000512 INF: FPGA: Recv ZSGSRD 34989
17-03-18 02:20:31.206 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.206 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.206 -07 000000462 INF: FPGA: Recv ZSGSRD 34980
17-03-18 02:20:31.216 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.216 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.216 -07 000000576 INF: FPGA: Recv ZSGSRD 34980
17-03-18 02:20:31.226 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.226 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.226 -07 000000606 INF: FPGA: Recv ZSGSRD 34988
17-03-18 02:20:31.236 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.236 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:31.236 -07 000000591 INF: FPGA: Recv ZSGSRD 34986
17-03-18 02:20:31.246 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.246 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:31.246 -07 000000502 INF: FPGA: Recv ZPIEZORD 30704
17-03-18 02:20:31.256 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:31.256 -07 000000610 INF: Z Motor: Piezo is near 45.6 V (nominally 0 to 100 V), expect near 55.0 V, since DAC is at 5.502 V. Piezo Error = -9.4 V.
17-03-18 02:20:31.256 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -165.1 um, Read 10 ADC samples: Avg = 34985 (-164.2 uncal um), Error = 0.8 uncal um, Median = 34986 (-164.2 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 34978 (-164.2 uncal um), Max = 34992 (-164.3 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:20:31.256 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 34985, posNoise = 7, negNoise = 7
17-03-18 02:20:31.256 -07 000000610 INF: Z Motor: After move to -0.165058, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:31.256 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 02:20:31.256 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:31.256 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:31.256 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:31.256 -07 000000569 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:31.256 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:31.256 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:31.256 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:31.256 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:31.256 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:31.256 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:31.256 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:31.256 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:31.266 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:31.266 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:31.266 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:31.266 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:31.276 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:20:31.276 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:20:31.276 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 02:20:31.276 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:20:31.276 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 36234 150\n [Camera]
17-03-18 02:20:31.466 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:31.476 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:31.476 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:31.876 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:31.876 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:31.876 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:31.876 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:31.876 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:31.876 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:31.876 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:31.876 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:20:31.876 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:31.876 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) start.
17-03-18 02:20:32.066 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 36234 779
17-03-18 02:20:32.216 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:32.256 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 1094749800, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 02:20:32.256 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 373 ms.
17-03-18 02:20:32.256 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:32.256 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 377 ms.
17-03-18 02:20:32.256 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:32.256 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:20:32.256 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 02:20:32.256 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:32.256 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:32.266 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 02:20:32.406 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:32.406 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:32.406 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:32.406 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:32.406 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 02:20:32.406 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:32.406 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:32.406 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:32.406 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:32.406 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 02:20:32.596 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:20:32.596 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:32.596 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 36234 150' command took 2 ms to send, 1307 ms to get response, and 1319 ms overall
17-03-18 02:20:32.606 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.999021,
17-03-18 02:20:32.786 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 381 ms.
17-03-18 02:20:32.786 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 02:20:32.786 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:32.786 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 379 ms.
17-03-18 02:20:32.786 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 02:20:32.786 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:32.796 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:32.796 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:20:32.796 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 02:20:32.796 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:32.796 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 02:20:32.836 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 41 ms.
17-03-18 02:20:32.836 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 02:20:32.876 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 02:20:32.876 -07 000000610 INF: Move compensator for Bottom-surface imaging.
17-03-18 02:20:32.876 -07 000000610 INF: FPGA: Xmit EMCUR 80\n [Compensator]
17-03-18 02:20:32.886 -07 000000629 INF: FPGA: Recv EMCUR 
17-03-18 02:20:32.886 -07 000000610 INF: FPGA: 'EMCUR 80' command took 0 ms to send, 1 ms to get response, and 2 ms overall
17-03-18 02:20:32.886 -07 000000610 INF: FPGA: Xmit EMIN 20 40\n [Compensator]
17-03-18 02:20:33.386 -07 000000591 INF: FPGA: Recv EMIN
17-03-18 02:20:33.386 -07 000000610 INF: FPGA: 'EMIN 20 40' command took 0 ms to send, 494 ms to get response, and 502 ms overall
17-03-18 02:20:33.386 -07 000000610 INF: FPGA: Xmit EMCUR 60\n [Compensator]
17-03-18 02:20:33.386 -07 000000569 INF: FPGA: Recv EMCUR 
17-03-18 02:20:33.396 -07 000000610 INF: FPGA: 'EMCUR 60' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:33.396 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 02:20:33.396 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 1 at Y-position 74.8310546875, Z-Position -0.165074413790642. ------
17-03-18 02:20:33.396 -07 000000467 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:33.396 -07 000000629 INF: Y Motor: MoveYZ optimized starting. Moving Y to 59.9126 mm, moving Z to -0.13971 mm
17-03-18 02:20:33.396 -07 000000629 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:33.396 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:33.406 -07 000000579 INF: Z Motor: Entering MoveAbsStepped (DAC = 30520, sync = True, waitForSettling = False)
17-03-18 02:20:33.406 -07 000000579 INF: Z Motor: Moving to -0.139712 mm, started at -0.165074 mm, distance = 25.36 um
17-03-18 02:20:33.406 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 95860 steps, sync = True, waitForSettling = True)
17-03-18 02:20:33.406 -07 000000569 INF: Y Motor: Moving to 59.9126 mm, started at 74.8311 mm, delta = -14.9184 mm
17-03-18 02:20:33.406 -07 000000467 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:33.406 -07 000000579 INF: FPGA: Xmit ZDACW 30520\n [Z Motor]
17-03-18 02:20:33.406 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 02:20:33.416 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:33.416 -07 000000579 INF: FPGA: 'ZDACW 30520' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:33.416 -07 000000576 INF: FPGA: Recv YRDPOS 153256
17-03-18 02:20:33.426 -07 000000467 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:20:33.426 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:33.426 -07 000000569 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:33.436 -07 000000579 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:33.436 -07 000000569 INF: Y Motor: Last commanded position = 74.8526 mm (119764.2 steps), delta from last commanded position = -14.9400 mm (-23904.0 steps). UsingTableMove = False
17-03-18 02:20:33.436 -07 000000569 INF: Y Motor: Moving to 122701 encoder counts
17-03-18 02:20:33.436 -07 000000461 INF: FPGA: Recv ZDACR 30520
17-03-18 02:20:33.446 -07 000000579 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:20:33.446 -07 000000569 INF: FPGA: Xmit YMVTO 122701\n [Y Motor]
17-03-18 02:20:33.446 -07 000000579 INF: Z Motor: MoveAbsStepped took 40 ms (did NOT wait for settling yet))
17-03-18 02:20:33.626 -07 000000502 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:20:33.626 -07 000000467 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 221 ms overall
17-03-18 02:20:35.066 -07 000000591 INF: FPGA: Recv YMVTO 122703 23903
17-03-18 02:20:35.066 -07 000000569 INF: FPGA: 'YMVTO 122701' command took 0 ms to send, 1618 ms to get response, and 1635 ms overall
17-03-18 02:20:35.066 -07 000000569 INF: Y Motor: Position error before settling = 2 encoder counts (0.001 mm)
17-03-18 02:20:35.066 -07 000000569 INF: Y Motor: To move from 74.832 to 59.913 (-14.918 mm) should take 23871 steps, but required 23903 steps (14.939 mm). Slippage = 0.020 mm (0.00%).
17-03-18 02:20:35.066 -07 000000569 INF: Y Motor: FPGA move command 'YMVTO 122701' took 1635 ms, distance = 14.918 mm, average velocity = 9.124 mm/sec
17-03-18 02:20:36.466 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:36.476 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:37.916 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:37.916 -07 000000467 INF: FPGA: Recv YRDPOS 122698
17-03-18 02:20:37.926 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:37.926 -07 000000569 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:37.956 -07 000000569 INF: Y Motor: After move to 59.912609, error = -0.001476, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:37.956 -07 000000569 INF: Y Motor: Position error after settling = -3 encoder counts (-0.001 mm), Delta during settling = -5 counts (-0.002 mm)
17-03-18 02:20:37.956 -07 000000569 INF: Y Motor: Moved to 59.9111 after 4556 ms
17-03-18 02:20:37.966 -07 000000606 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.993549,
17-03-18 02:20:37.966 -07 000000629 INF: Z Motor: EndOfMoveAbsStepped: target = -0.139712 mm (DAC = 30520)
17-03-18 02:20:37.986 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:37.986 -07 000000444 INF: FPGA: Recv ZSGSRD 31038
17-03-18 02:20:37.996 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 28 ms overall
17-03-18 02:20:38.006 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.006 -07 000000512 INF: FPGA: Recv ZSGSRD 31040
17-03-18 02:20:38.016 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:38.016 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.016 -07 000000576 INF: FPGA: Recv ZSGSRD 31039
17-03-18 02:20:38.026 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.036 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.036 -07 000000444 INF: FPGA: Recv ZSGSRD 31037
17-03-18 02:20:38.046 -07 000000629 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:38.046 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.046 -07 000000424 INF: FPGA: Recv ZSGSRD 31037
17-03-18 02:20:38.056 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.056 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.056 -07 000000462 INF: FPGA: Recv ZSGSRD 31036
17-03-18 02:20:38.066 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.066 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.066 -07 000000501 INF: FPGA: Recv ZSGSRD 31039
17-03-18 02:20:38.076 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.076 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.076 -07 000000424 INF: FPGA: Recv ZSGSRD 31038
17-03-18 02:20:38.086 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.086 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.086 -07 000000606 INF: FPGA: Recv ZSGSRD 31035
17-03-18 02:20:38.096 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.096 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:38.096 -07 000000591 INF: FPGA: Recv ZSGSRD 31043
17-03-18 02:20:38.106 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.106 -07 000000629 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:38.106 -07 000000569 INF: FPGA: Recv ZPIEZORD 26555
17-03-18 02:20:38.116 -07 000000629 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.116 -07 000000629 INF: Z Motor: Piezo is near 36.7 V (nominally 0 to 100 V), expect near 46.6 V, since DAC is at 4.657 V. Piezo Error = -9.8 V.
17-03-18 02:20:38.116 -07 000000629 INF: Z Motor: ReadAdcAverage: Commanded Z = -139.7 um, Read 10 ADC samples: Avg = 31038 (-138.9 uncal um), Error = 0.8 uncal um, Median = 31038 (-138.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 31035 (-138.9 uncal um), Max = 31043 (-138.9 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:20:38.116 -07 000000629 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 31038, posNoise = 5, negNoise = 3
17-03-18 02:20:38.116 -07 000000629 INF: Z Motor: After move to -0.139712, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:38.116 -07 000000629 INF: Z Motor: Settle wait time = 4560 ms, measure time = 150 ms (allowed 150 ms), total time = 4710 ms
17-03-18 02:20:38.116 -07 000000629 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 4713 ms
17-03-18 02:20:38.116 -07 000000629 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:38.116 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:38.116 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:38.116 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:38.116 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:38.116 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:20:38.116 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:38.116 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:38.116 -07 000000591 INF: Camera: sBCa_SetPowerMode(785074288, 1) start.
17-03-18 02:20:38.136 -07 000000591 INF: Camera: sBCa_SetPowerMode(785074288, 1) end. Duration was 20 ms.
17-03-18 02:20:38.136 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:20:38.146 -07 000000591 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:38.146 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:20:38.146 -07 000000591 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 02:20:38.146 -07 000000591 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 31 ms.
17-03-18 02:20:38.156 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:20:38.196 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:20:38.496 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:20:38.496 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:20:38.496 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:20:38.496 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1182469392, 0x0, 559484976) start.
17-03-18 02:20:38.536 -07 000000606 INF: FPGA: Recv @CAMSNAP 382
17-03-18 02:20:38.536 -07 000000626 INF: FPGA: Recv CAMSNAP
17-03-18 02:20:38.536 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 378 ms to get response, and 386 ms overall
17-03-18 02:20:38.616 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1182469392, 0x0, 559484976) end. Duration was 115 ms.
17-03-18 02:20:38.616 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:38.616 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 1 ms.
17-03-18 02:20:38.616 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 118 ms.
17-03-18 02:20:38.636 -07 000000629 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:38.636 -07 000000455 INF: Image SNR check: start
17-03-18 02:20:38.636 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:38.646 -07 000000629 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:38.646 -07 000000629 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:20:38.646 -07 000000455 INF: Image SNR check: pass  [peak (Max-Min)=144.91]
17-03-18 02:20:38.646 -07 000000455 INF: Autofocus start
17-03-18 02:20:38.656 -07 000000455 INF: MeasureProfile start
17-03-18 02:20:38.666 -07 000000455 INF: MeasureProfile done
17-03-18 02:20:38.666 -07 000000455 INF: X=-16  Z correction [um]=-0.08128808
17-03-18 02:20:38.666 -07 000000455 INF: Autofocus finished
17-03-18 02:20:38.846 -07 000000430 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:20:38.846 -07 000000629 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:20:38.846 -07 000000610 INF: ------------ Scan Snapping tile 1 at Y-position 59.9111328125, Z-position -0.139718048467112. ----------
17-03-18 02:20:38.966 -07 000000610 INF: Cycle	98	Tile	1	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:38.966 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 29015, sync = True, waitForSettling = True)
17-03-18 02:20:38.966 -07 000000610 INF: Z Motor: Moving to -0.132822 mm, started at -0.139718 mm, distance = 6.90 um
17-03-18 02:20:38.966 -07 000000610 INF: FPGA: Xmit ZDACW 29015\n [Z Motor]
17-03-18 02:20:38.966 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 02:20:38.976 -07 000000610 INF: FPGA: 'ZDACW 29015' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:38.976 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:38.976 -07 000000561 INF: FPGA: Recv ZDACR 29015
17-03-18 02:20:38.986 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:38.986 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:39.136 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.136 -07 000000430 INF: FPGA: Recv ZSGSRD 29965
17-03-18 02:20:39.146 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.146 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.146 -07 000000455 INF: FPGA: Recv ZSGSRD 29968
17-03-18 02:20:39.156 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.156 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.156 -07 000000629 INF: FPGA: Recv ZSGSRD 29969
17-03-18 02:20:39.166 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.166 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.166 -07 000000579 INF: FPGA: Recv ZSGSRD 29967
17-03-18 02:20:39.176 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.176 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.176 -07 000000590 INF: FPGA: Recv ZSGSRD 29970
17-03-18 02:20:39.186 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.186 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.186 -07 000000461 INF: FPGA: Recv ZSGSRD 29965
17-03-18 02:20:39.196 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.196 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.196 -07 000000444 INF: FPGA: Recv ZSGSRD 29963
17-03-18 02:20:39.206 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.206 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.206 -07 000000606 INF: FPGA: Recv ZSGSRD 29966
17-03-18 02:20:39.216 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.216 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.216 -07 000000579 INF: FPGA: Recv ZSGSRD 29968
17-03-18 02:20:39.226 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.226 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:39.226 -07 000000576 INF: FPGA: Recv ZSGSRD 29970
17-03-18 02:20:39.236 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.236 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:39.236 -07 000000424 INF: FPGA: Recv ZPIEZORD 25377
17-03-18 02:20:39.246 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:39.246 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.427 V. Piezo Error = -10.1 V.
17-03-18 02:20:39.246 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.8 um, Read 10 ADC samples: Avg = 29967 (-132.1 uncal um), Error = 0.8 uncal um, Median = 29968 (-132.1 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29963 (-132.0 uncal um), Max = 29970 (-132.1 uncal um), Pos Noise = 3 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:20:39.246 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29967, posNoise = 3, negNoise = 4
17-03-18 02:20:39.246 -07 000000610 INF: Z Motor: After move to -0.132822, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:39.246 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 02:20:39.246 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:39.246 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:39.246 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:39.246 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:39.246 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:39.246 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:39.246 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:39.246 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:39.246 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:39.246 -07 000000590 INF: Camera: sBCa_SetPowerMode(785074704, 1) start.
17-03-18 02:20:39.246 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:39.246 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:39.256 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:39.256 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:39.266 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 02:20:39.266 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 02:20:39.266 -07 000000590 INF: Camera: sBCa_SetPowerMode(785074704, 1) end. Duration was 20 ms.
17-03-18 02:20:39.266 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:39.276 -07 000000590 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 02:20:39.276 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:39.286 -07 000000590 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 02:20:39.286 -07 000000590 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 32 ms.
17-03-18 02:20:39.286 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 29191 150\n [Camera]
17-03-18 02:20:39.486 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:39.876 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:39.876 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:39.876 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:39.876 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:39.886 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:39.886 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:39.886 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:39.886 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) start.
17-03-18 02:20:39.886 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:39.886 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) start.
17-03-18 02:20:40.066 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29191 779
17-03-18 02:20:40.216 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:40.276 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 591793880, 0x0, 391868352) end. Duration was 392 ms.
17-03-18 02:20:40.276 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 02:20:40.276 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:40.276 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 639799168, 0x0, 418435064) end. Duration was 390 ms.
17-03-18 02:20:40.276 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 390 ms.
17-03-18 02:20:40.276 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:40.286 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:40.286 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 02:20:40.286 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:40.286 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 406 ms.
17-03-18 02:20:40.406 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:40.406 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:40.406 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:40.416 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:40.416 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:40.416 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:40.526 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:40.526 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:20:40.536 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:40.536 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:20:40.596 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:40.606 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:40.606 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 29191 150' command took 2 ms to send, 1310 ms to get response, and 1317 ms overall
17-03-18 02:20:40.606 -07 000000610 INF: Skipping AutoFocus in Tile 2: adopting Best-Z from the cache: -0.133112
17-03-18 02:20:40.606 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 60.7426 mm, moving Z to -0.13311 mm
17-03-18 02:20:40.606 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:40.606 -07 000000579 INF: Y Motor: Entering MoveAbsStepped (target = 97188 steps, sync = True, waitForSettling = True)
17-03-18 02:20:40.606 -07 000000579 INF: Y Motor: Moving to 60.7426 mm, started at 59.9111 mm, delta = 0.8315 mm
17-03-18 02:20:40.606 -07 000000502 INF: Z Motor: Entering MoveAbsStepped (DAC = 29078, sync = True, waitForSettling = False)
17-03-18 02:20:40.606 -07 000000502 INF: Z Motor: Moving to -0.133111 mm, started at -0.132838 mm, distance = -0.27 um
17-03-18 02:20:40.606 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:40.606 -07 000000430 INF: FPGA: Recv YRDPOS 122698
17-03-18 02:20:40.616 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:40.616 -07 000000579 INF: Y Motor: Encoder = 122698 = motor step 95857.8 = 59.9111 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:40.616 -07 000000579 INF: Y Motor: Last commanded position = 59.9126 mm (95860.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:40.616 -07 000000579 INF: Y Motor: Moving 1330 steps2
17-03-18 02:20:40.616 -07 000000579 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:40.626 -07 000000502 INF: FPGA: Xmit ZDACW 29078\n [Z Motor]
17-03-18 02:20:40.626 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 02:20:40.636 -07 000000502 INF: FPGA: 'ZDACW 29078' command took 0 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 02:20:40.636 -07 000000502 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:40.636 -07 000000561 INF: FPGA: Recv ZDACR 29078
17-03-18 02:20:40.646 -07 000000502 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:40.646 -07 000000502 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 02:20:40.916 -07 000000501 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 02:20:40.916 -07 000000501 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 02:20:40.916 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:40.926 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:40.926 -07 000000590 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 394 ms.
17-03-18 02:20:40.926 -07 000000590 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 02:20:40.926 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:40.926 -07 000000501 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 02:20:40.926 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:40.926 -07 000000590 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-18 02:20:40.986 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 02:20:40.986 -07 000000579 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 378 ms overall
17-03-18 02:20:41.026 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:41.026 -07 000000606 INF: FPGA: Recv YRDPOS 124381
17-03-18 02:20:41.036 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:41.036 -07 000000579 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:41.036 -07 000000579 INF: Y Motor: Position error before settling (table move) = -20 encoder counts (-0.010 mm)
17-03-18 02:20:41.036 -07 000000579 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 378 ms, distance = 0.831 mm, average velocity = 2.200 mm/sec
17-03-18 02:20:41.476 -07 000000618 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:41.476 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:41.986 -07 000000579 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:41.986 -07 000000501 INF: FPGA: Recv YRDPOS 124381
17-03-18 02:20:41.996 -07 000000579 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:41.996 -07 000000579 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:42.016 -07 000000579 INF: Y Motor: After move to 60.742607, error = -0.009697, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:42.016 -07 000000579 INF: Y Motor: Position error after settling (table move) = -20 encoder counts (-0.010 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:42.026 -07 000000579 INF: Y Motor: Moved to 60.7329 after 1414 ms (table move)
17-03-18 02:20:42.026 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.133111 mm (DAC = 29078)
17-03-18 02:20:42.026 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.026 -07 000000461 INF: FPGA: Recv ZSGSRD 30013
17-03-18 02:20:42.036 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:20:42.036 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.036 -07 000000591 INF: FPGA: Recv ZSGSRD 30014
17-03-18 02:20:42.046 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.046 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.046 -07 000000569 INF: FPGA: Recv ZSGSRD 30017
17-03-18 02:20:42.056 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.056 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.056 -07 000000444 INF: FPGA: Recv ZSGSRD 30013
17-03-18 02:20:42.066 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.066 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.066 -07 000000626 INF: FPGA: Recv ZSGSRD 30015
17-03-18 02:20:42.076 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.076 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.076 -07 000000455 INF: FPGA: Recv ZSGSRD 30004
17-03-18 02:20:42.086 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.086 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.086 -07 000000576 INF: FPGA: Recv ZSGSRD 30003
17-03-18 02:20:42.096 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.096 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.096 -07 000000569 INF: FPGA: Recv ZSGSRD 30012
17-03-18 02:20:42.106 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.106 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.106 -07 000000618 INF: FPGA: Recv ZSGSRD 30012
17-03-18 02:20:42.116 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.116 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.116 -07 000000579 INF: FPGA: Recv ZSGSRD 30011
17-03-18 02:20:42.126 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.126 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:42.126 -07 000000461 INF: FPGA: Recv ZPIEZORD 25549
17-03-18 02:20:42.136 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.136 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.4 V, since DAC is at 4.437 V. Piezo Error = -9.8 V.
17-03-18 02:20:42.136 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.1 um, Read 10 ADC samples: Avg = 30011 (-132.3 uncal um), Error = 0.8 uncal um, Median = 30012 (-132.3 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30003 (-132.3 uncal um), Max = 30017 (-132.4 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:20:42.136 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30011, posNoise = 6, negNoise = 8
17-03-18 02:20:42.136 -07 000000610 INF: Z Motor: After move to -0.133111, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:42.136 -07 000000610 INF: Z Motor: Settle wait time = 1416 ms, measure time = 108 ms (allowed 150 ms), total time = 1524 ms
17-03-18 02:20:42.136 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:42.186 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1577 ms
17-03-18 02:20:42.186 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:42.186 -07 000000610 INF: ------------ Scan Snapping tile 2 at Y-position 60.73291015625, Z-position -0.133120382597523. ----------
17-03-18 02:20:42.186 -07 000000610 INF: Cycle	98	Tile	2	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:42.186 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28902, sync = True, waitForSettling = True)
17-03-18 02:20:42.186 -07 000000610 INF: Z Motor: Moving to -0.132305 mm, started at -0.133120 mm, distance = 0.82 um
17-03-18 02:20:42.186 -07 000000610 INF: FPGA: Xmit ZDACW 28902\n [Z Motor]
17-03-18 02:20:42.186 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 02:20:42.196 -07 000000610 INF: FPGA: 'ZDACW 28902' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:42.196 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:42.196 -07 000000561 INF: FPGA: Recv ZDACR 28902
17-03-18 02:20:42.206 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.206 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:42.356 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.356 -07 000000424 INF: FPGA: Recv ZSGSRD 29892
17-03-18 02:20:42.366 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:42.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.366 -07 000000462 INF: FPGA: Recv ZSGSRD 29886
17-03-18 02:20:42.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.376 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.376 -07 000000629 INF: FPGA: Recv ZSGSRD 29880
17-03-18 02:20:42.386 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.386 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.386 -07 000000430 INF: FPGA: Recv ZSGSRD 29886
17-03-18 02:20:42.396 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.396 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.396 -07 000000467 INF: FPGA: Recv ZSGSRD 29883
17-03-18 02:20:42.406 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.406 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.406 -07 000000444 INF: FPGA: Recv ZSGSRD 29887
17-03-18 02:20:42.416 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.416 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.416 -07 000000591 INF: FPGA: Recv ZSGSRD 29884
17-03-18 02:20:42.426 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.436 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.436 -07 000000561 INF: FPGA: Recv ZSGSRD 29890
17-03-18 02:20:42.446 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:42.446 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.446 -07 000000502 INF: FPGA: Recv ZSGSRD 29886
17-03-18 02:20:42.456 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.456 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:42.456 -07 000000430 INF: FPGA: Recv ZSGSRD 29885
17-03-18 02:20:42.466 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.466 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:42.466 -07 000000629 INF: FPGA: Recv ZPIEZORD 25364
17-03-18 02:20:42.476 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:42.476 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.410 V. Piezo Error = -9.9 V.
17-03-18 02:20:42.476 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.3 um, Read 10 ADC samples: Avg = 29886 (-131.5 uncal um), Error = 0.8 uncal um, Median = 29886 (-131.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29880 (-131.5 uncal um), Max = 29892 (-131.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:42.476 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29886, posNoise = 6, negNoise = 6
17-03-18 02:20:42.476 -07 000000610 INF: Z Motor: After move to -0.132305, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:42.476 -07 000000610 INF: Z Motor: MoveAbsStepped took 285 ms)
17-03-18 02:20:42.476 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:42.476 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:42.476 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:42.476 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:42.476 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:42.476 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:42.476 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:42.476 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:42.476 -07 000000618 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:42.476 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:42.476 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:42.476 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:42.476 -07 000000618 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:42.476 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:42.486 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:20:42.486 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:42.496 -07 000000618 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 02:20:42.496 -07 000000618 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:20:42.496 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 02:20:42.496 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:42.496 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 29078 150\n [Camera]
17-03-18 02:20:42.696 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:43.096 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:43.096 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:43.096 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:43.096 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:43.096 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:43.096 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:43.096 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:43.096 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) start.
17-03-18 02:20:43.096 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:43.096 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:20:43.286 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29078 779
17-03-18 02:20:43.356 -07 000000461 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.012614,
17-03-18 02:20:43.436 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:43.496 -07 000000591 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 02:20:43.496 -07 000000591 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 395 ms.
17-03-18 02:20:43.496 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:43.496 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:43.496 -07 000000591 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 02:20:43.496 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1389170736, 0x0, 418435064) end. Duration was 399 ms.
17-03-18 02:20:43.496 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 401 ms.
17-03-18 02:20:43.496 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:43.506 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:43.506 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 411 ms.
17-03-18 02:20:43.626 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:43.626 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:43.626 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:43.626 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:43.626 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) start.
17-03-18 02:20:43.626 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:43.626 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:43.636 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:43.636 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:43.636 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) start.
17-03-18 02:20:43.816 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:43.816 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:43.816 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 29078 150' command took 2 ms to send, 1306 ms to get response, and 1317 ms overall
17-03-18 02:20:43.816 -07 000000610 INF: Skipping AutoFocus in Tile 3: adopting Best-Z from the cache: -0.132993
17-03-18 02:20:43.816 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 61.5726 mm, moving Z to -0.13299 mm
17-03-18 02:20:43.816 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:43.826 -07 000000467 INF: Y Motor: Entering MoveAbsStepped (target = 98516 steps, sync = True, waitForSettling = True)
17-03-18 02:20:43.826 -07 000000467 INF: Y Motor: Moving to 61.5726 mm, started at 60.7329 mm, delta = 0.8397 mm
17-03-18 02:20:43.826 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:43.826 -07 000000569 INF: Z Motor: Entering MoveAbsStepped (DAC = 29052, sync = True, waitForSettling = False)
17-03-18 02:20:43.826 -07 000000569 INF: Z Motor: Moving to -0.132992 mm, started at -0.132317 mm, distance = -0.67 um
17-03-18 02:20:43.826 -07 000000618 INF: FPGA: Recv YRDPOS 124381
17-03-18 02:20:43.836 -07 000000569 INF: FPGA: Xmit ZDACW 29052\n [Z Motor]
17-03-18 02:20:43.836 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:43.836 -07 000000467 INF: Y Motor: Encoder = 124381 = motor step 97172.7 = 60.7329 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:43.836 -07 000000467 INF: Y Motor: Last commanded position = 60.7426 mm (97188.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:43.836 -07 000000467 INF: Y Motor: Moving 1344 steps-20
17-03-18 02:20:43.836 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 02:20:43.846 -07 000000569 INF: FPGA: 'ZDACW 29052' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:20:43.846 -07 000000569 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:43.846 -07 000000461 INF: FPGA: Recv ZDACR 29052
17-03-18 02:20:43.856 -07 000000467 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:43.856 -07 000000569 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:43.856 -07 000000569 INF: Z Motor: MoveAbsStepped took 29 ms (did NOT wait for settling yet))
17-03-18 02:20:44.026 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1424593000, 0x0, 391868352) end. Duration was 403 ms.
17-03-18 02:20:44.026 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 403 ms.
17-03-18 02:20:44.026 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:44.036 -07 000000606 INF: Camera: sBCa_ReadImage(785074704, 1460015264, 0x0, 418435064) end. Duration was 401 ms.
17-03-18 02:20:44.036 -07 000000606 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 402 ms.
17-03-18 02:20:44.036 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:44.036 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:44.036 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 02:20:44.036 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:44.046 -07 000000606 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 412 ms.
17-03-18 02:20:44.226 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 02:20:44.226 -07 000000467 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 398 ms overall
17-03-18 02:20:44.276 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:44.276 -07 000000501 INF: FPGA: Recv YRDPOS 126083
17-03-18 02:20:44.286 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:20:44.286 -07 000000467 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:44.286 -07 000000467 INF: Y Motor: Position error before settling (table move) = -18 encoder counts (-0.009 mm)
17-03-18 02:20:44.286 -07 000000467 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 399 ms, distance = 0.840 mm, average velocity = 2.105 mm/sec
17-03-18 02:20:45.236 -07 000000467 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:45.236 -07 000000512 INF: FPGA: Recv YRDPOS 126083
17-03-18 02:20:45.246 -07 000000467 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:45.246 -07 000000467 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:45.266 -07 000000467 INF: Y Motor: After move to 61.572609, error = -0.008644, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:45.266 -07 000000467 INF: Y Motor: Position error after settling (table move) = -18 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:45.266 -07 000000467 INF: Y Motor: Moved to 61.5640 after 1447 ms (table move)
17-03-18 02:20:45.276 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132992 mm (DAC = 29052)
17-03-18 02:20:45.276 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.276 -07 000000502 INF: FPGA: Recv ZSGSRD 29987
17-03-18 02:20:45.286 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.286 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.286 -07 000000626 INF: FPGA: Recv ZSGSRD 29987
17-03-18 02:20:45.296 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.296 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.296 -07 000000501 INF: FPGA: Recv ZSGSRD 30002
17-03-18 02:20:45.306 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.306 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.306 -07 000000591 INF: FPGA: Recv ZSGSRD 29999
17-03-18 02:20:45.316 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.316 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.316 -07 000000455 INF: FPGA: Recv ZSGSRD 29993
17-03-18 02:20:45.326 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.326 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.326 -07 000000462 INF: FPGA: Recv ZSGSRD 29997
17-03-18 02:20:45.336 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.336 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.336 -07 000000626 INF: FPGA: Recv ZSGSRD 29988
17-03-18 02:20:45.346 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.346 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.346 -07 000000467 INF: FPGA: Recv ZSGSRD 29986
17-03-18 02:20:45.356 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.356 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.356 -07 000000590 INF: FPGA: Recv ZSGSRD 29991
17-03-18 02:20:45.366 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.366 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.366 -07 000000455 INF: FPGA: Recv ZSGSRD 29993
17-03-18 02:20:45.376 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.376 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:45.376 -07 000000561 INF: FPGA: Recv ZPIEZORD 25528
17-03-18 02:20:45.386 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.386 -07 000000610 INF: Z Motor: Piezo is near 34.5 V (nominally 0 to 100 V), expect near 44.3 V, since DAC is at 4.433 V. Piezo Error = -9.8 V.
17-03-18 02:20:45.386 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -133.0 um, Read 10 ADC samples: Avg = 29992 (-132.2 uncal um), Error = 0.8 uncal um, Median = 29992 (-132.2 uncal um), StdDev = 6 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29986 (-132.2 uncal um), Max = 30002 (-132.3 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:45.386 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29992, posNoise = 10, negNoise = 6
17-03-18 02:20:45.386 -07 000000610 INF: Z Motor: After move to -0.132992, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:45.386 -07 000000610 INF: Z Motor: Settle wait time = 1449 ms, measure time = 110 ms (allowed 150 ms), total time = 1559 ms
17-03-18 02:20:45.386 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:45.426 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1601 ms
17-03-18 02:20:45.426 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:45.426 -07 000000610 INF: ------------ Scan Snapping tile 3 at Y-position 61.56396484375, Z-position -0.13299832256683. ----------
17-03-18 02:20:45.426 -07 000000610 INF: Cycle	98	Tile	3	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:45.426 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28876, sync = True, waitForSettling = True)
17-03-18 02:20:45.426 -07 000000610 INF: Z Motor: Moving to -0.132186 mm, started at -0.132998 mm, distance = 0.81 um
17-03-18 02:20:45.426 -07 000000610 INF: FPGA: Xmit ZDACW 28876\n [Z Motor]
17-03-18 02:20:45.426 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 02:20:45.436 -07 000000610 INF: FPGA: 'ZDACW 28876' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:45.436 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:45.436 -07 000000462 INF: FPGA: Recv ZDACR 28876
17-03-18 02:20:45.446 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.446 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:45.596 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.596 -07 000000430 INF: FPGA: Recv ZSGSRD 29865
17-03-18 02:20:45.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:45.606 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.606 -07 000000467 INF: FPGA: Recv ZSGSRD 29867
17-03-18 02:20:45.616 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.616 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.616 -07 000000590 INF: FPGA: Recv ZSGSRD 29875
17-03-18 02:20:45.626 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.626 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.626 -07 000000626 INF: FPGA: Recv ZSGSRD 29877
17-03-18 02:20:45.636 -07 000000610 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.636 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.636 -07 000000467 INF: FPGA: Recv ZSGSRD 29864
17-03-18 02:20:45.646 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.646 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.646 -07 000000462 INF: FPGA: Recv ZSGSRD 29861
17-03-18 02:20:45.656 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.656 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.656 -07 000000444 INF: FPGA: Recv ZSGSRD 29865
17-03-18 02:20:45.666 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.666 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.666 -07 000000629 INF: FPGA: Recv ZSGSRD 29866
17-03-18 02:20:45.676 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.676 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.676 -07 000000591 INF: FPGA: Recv ZSGSRD 29864
17-03-18 02:20:45.686 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.686 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:45.686 -07 000000455 INF: FPGA: Recv ZSGSRD 29873
17-03-18 02:20:45.696 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.696 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:45.696 -07 000000590 INF: FPGA: Recv ZPIEZORD 25388
17-03-18 02:20:45.706 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:45.706 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 44.1 V, since DAC is at 4.406 V. Piezo Error = -9.8 V.
17-03-18 02:20:45.706 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.2 um, Read 10 ADC samples: Avg = 29868 (-131.4 uncal um), Error = 0.8 uncal um, Median = 29866 (-131.4 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29861 (-131.4 uncal um), Max = 29877 (-131.5 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:20:45.706 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29868, posNoise = 9, negNoise = 7
17-03-18 02:20:45.706 -07 000000610 INF: Z Motor: After move to -0.132186, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:45.706 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:20:45.706 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:45.706 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:45.706 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:45.706 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:45.706 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:45.706 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:45.706 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:45.706 -07 000000629 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:45.706 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:45.706 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:45.706 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:45.706 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:45.716 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:45.716 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:45.716 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:45.716 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:45.726 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:20:45.726 -07 000000455 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:45.726 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 02:20:45.726 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:45.736 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 29052 150\n [Camera]
17-03-18 02:20:45.936 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 194
17-03-18 02:20:46.326 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:46.326 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:46.326 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:46.326 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:46.326 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 02:20:46.326 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:46.326 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:46.336 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:46.336 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:46.336 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) start.
17-03-18 02:20:46.476 -07 000000606 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:46.476 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:46.516 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 29052 779
17-03-18 02:20:46.666 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:46.726 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 395 ms.
17-03-18 02:20:46.726 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 396 ms.
17-03-18 02:20:46.726 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:46.726 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2182910056, 0x0, 418435064) end. Duration was 391 ms.
17-03-18 02:20:46.726 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 02:20:46.726 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:46.726 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:46.726 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 401 ms.
17-03-18 02:20:46.726 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:20:46.736 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 02:20:46.856 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:46.856 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:46.856 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:46.856 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:46.856 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) start.
17-03-18 02:20:46.856 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:46.856 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:46.866 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:46.866 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:46.866 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) start.
17-03-18 02:20:47.046 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:47.056 -07 000000629 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:47.056 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 29052 150' command took 2 ms to send, 1310 ms to get response, and 1319 ms overall
17-03-18 02:20:47.056 -07 000000610 INF: Skipping AutoFocus in Tile 4: adopting Best-Z from the cache: -0.132682
17-03-18 02:20:47.056 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 62.4026 mm, moving Z to -0.13268 mm
17-03-18 02:20:47.056 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:47.056 -07 000000626 INF: Y Motor: Entering MoveAbsStepped (target = 99844 steps, sync = True, waitForSettling = True)
17-03-18 02:20:47.056 -07 000000626 INF: Y Motor: Moving to 62.4026 mm, started at 61.5640 mm, delta = 0.8386 mm
17-03-18 02:20:47.056 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:47.056 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28984, sync = True, waitForSettling = False)
17-03-18 02:20:47.056 -07 000000591 INF: Z Motor: Moving to -0.132680 mm, started at -0.132202 mm, distance = -0.48 um
17-03-18 02:20:47.056 -07 000000576 INF: FPGA: Recv YRDPOS 126083
17-03-18 02:20:47.066 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:47.066 -07 000000626 INF: Y Motor: Encoder = 126083 = motor step 98502.3 = 61.5640 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:47.066 -07 000000626 INF: Y Motor: Last commanded position = 61.5726 mm (98516.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:47.066 -07 000000626 INF: Y Motor: Moving 1342 steps-18
17-03-18 02:20:47.066 -07 000000591 INF: FPGA: Xmit ZDACW 28984\n [Z Motor]
17-03-18 02:20:47.066 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 02:20:47.076 -07 000000591 INF: FPGA: 'ZDACW 28984' command took 1 ms to send, 0 ms to get response, and 15 ms overall
17-03-18 02:20:47.076 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:47.076 -07 000000462 INF: FPGA: Recv ZDACR 28984
17-03-18 02:20:47.086 -07 000000626 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:47.086 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:47.086 -07 000000591 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 02:20:47.236 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 2218332320, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 02:20:47.246 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:20:47.246 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:47.246 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2281705520, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 02:20:47.246 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 02:20:47.246 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:47.246 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:47.246 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 02:20:47.246 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:47.256 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:20:47.456 -07 000000629 INF: FPGA: Recv YMVTILE
17-03-18 02:20:47.456 -07 000000626 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:20:47.506 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:47.506 -07 000000512 INF: FPGA: Recv YRDPOS 127786
17-03-18 02:20:47.516 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:47.516 -07 000000626 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:47.516 -07 000000626 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 02:20:47.516 -07 000000626 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.839 mm, average velocity = 2.107 mm/sec
17-03-18 02:20:48.466 -07 000000626 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:48.466 -07 000000455 INF: FPGA: Recv YRDPOS 127786
17-03-18 02:20:48.476 -07 000000626 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:48.476 -07 000000626 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:48.496 -07 000000626 INF: Y Motor: After move to 62.402607, error = -0.007099, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:48.496 -07 000000626 INF: Y Motor: Position error after settling (table move) = -15 encoder counts (-0.007 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:48.496 -07 000000626 INF: Y Motor: Moved to 62.3955 after 1443 ms (table move)
17-03-18 02:20:48.506 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.132680 mm (DAC = 28984)
17-03-18 02:20:48.506 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.506 -07 000000590 INF: FPGA: Recv ZSGSRD 29940
17-03-18 02:20:48.516 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.516 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.516 -07 000000444 INF: FPGA: Recv ZSGSRD 29947
17-03-18 02:20:48.526 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.526 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.526 -07 000000502 INF: FPGA: Recv ZSGSRD 29955
17-03-18 02:20:48.536 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.536 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.536 -07 000000455 INF: FPGA: Recv ZSGSRD 29945
17-03-18 02:20:48.546 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.546 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.546 -07 000000461 INF: FPGA: Recv ZSGSRD 29942
17-03-18 02:20:48.556 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.556 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.556 -07 000000569 INF: FPGA: Recv ZSGSRD 29937
17-03-18 02:20:48.566 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.566 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.566 -07 000000444 INF: FPGA: Recv ZSGSRD 29944
17-03-18 02:20:48.576 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.576 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.576 -07 000000502 INF: FPGA: Recv ZSGSRD 29942
17-03-18 02:20:48.586 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.586 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.586 -07 000000512 INF: FPGA: Recv ZSGSRD 29943
17-03-18 02:20:48.596 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.596 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.596 -07 000000461 INF: FPGA: Recv ZSGSRD 29948
17-03-18 02:20:48.606 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.606 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:48.606 -07 000000629 INF: FPGA: Recv ZPIEZORD 25542
17-03-18 02:20:48.616 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.616 -07 000000610 INF: Z Motor: Piezo is near 34.6 V (nominally 0 to 100 V), expect near 44.2 V, since DAC is at 4.423 V. Piezo Error = -9.7 V.
17-03-18 02:20:48.616 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -132.7 um, Read 10 ADC samples: Avg = 29944 (-131.9 uncal um), Error = 0.8 uncal um, Median = 29944 (-131.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 18 (0.1 uncal um), Min = 29937 (-131.9 uncal um), Max = 29955 (-132.0 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:20:48.616 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29944, posNoise = 11, negNoise = 7
17-03-18 02:20:48.616 -07 000000610 INF: Z Motor: After move to -0.132680, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:48.616 -07 000000610 INF: Z Motor: Settle wait time = 1445 ms, measure time = 112 ms (allowed 150 ms), total time = 1557 ms
17-03-18 02:20:48.616 -07 000000610 INF: Z Motor: Waiting extra 38 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:48.656 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1597 ms
17-03-18 02:20:48.656 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:48.656 -07 000000610 INF: ------------ Scan Snapping tile 4 at Y-position 62.3955078125, Z-position -0.132689960384025. ----------
17-03-18 02:20:48.656 -07 000000610 INF: Cycle	98	Tile	4	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:48.656 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28808, sync = True, waitForSettling = True)
17-03-18 02:20:48.656 -07 000000610 INF: Z Motor: Moving to -0.131875 mm, started at -0.132690 mm, distance = 0.82 um
17-03-18 02:20:48.656 -07 000000610 INF: FPGA: Xmit ZDACW 28808\n [Z Motor]
17-03-18 02:20:48.656 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 02:20:48.666 -07 000000610 INF: FPGA: 'ZDACW 28808' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:48.666 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:48.666 -07 000000561 INF: FPGA: Recv ZDACR 28808
17-03-18 02:20:48.676 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.676 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:48.716 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.016692,
17-03-18 02:20:48.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.826 -07 000000590 INF: FPGA: Recv ZSGSRD 29821
17-03-18 02:20:48.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:48.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.836 -07 000000626 INF: FPGA: Recv ZSGSRD 29825
17-03-18 02:20:48.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.846 -07 000000501 INF: FPGA: Recv ZSGSRD 29818
17-03-18 02:20:48.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.856 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.856 -07 000000579 INF: FPGA: Recv ZSGSRD 29819
17-03-18 02:20:48.866 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.866 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.866 -07 000000462 INF: FPGA: Recv ZSGSRD 29816
17-03-18 02:20:48.876 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.876 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.876 -07 000000591 INF: FPGA: Recv ZSGSRD 29814
17-03-18 02:20:48.886 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.886 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.886 -07 000000502 INF: FPGA: Recv ZSGSRD 29815
17-03-18 02:20:48.896 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.896 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.896 -07 000000501 INF: FPGA: Recv ZSGSRD 29816
17-03-18 02:20:48.906 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.906 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.906 -07 000000579 INF: FPGA: Recv ZSGSRD 29825
17-03-18 02:20:48.916 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.916 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:48.916 -07 000000424 INF: FPGA: Recv ZSGSRD 29819
17-03-18 02:20:48.926 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.926 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:48.926 -07 000000561 INF: FPGA: Recv ZPIEZORD 25319
17-03-18 02:20:48.936 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:48.936 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 44.0 V, since DAC is at 4.396 V. Piezo Error = -9.9 V.
17-03-18 02:20:48.936 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.9 um, Read 10 ADC samples: Avg = 29819 (-131.1 uncal um), Error = 0.8 uncal um, Median = 29818 (-131.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29814 (-131.1 uncal um), Max = 29825 (-131.1 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:20:48.936 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29819, posNoise = 6, negNoise = 5
17-03-18 02:20:48.936 -07 000000610 INF: Z Motor: After move to -0.131875, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:48.936 -07 000000610 INF: Z Motor: MoveAbsStepped took 277 ms)
17-03-18 02:20:48.936 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:48.936 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:48.936 -07 000000618 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:48.936 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:48.936 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:48.936 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:48.936 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:48.936 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:48.936 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 02:20:48.936 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:48.936 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:48.936 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:48.946 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:48.946 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:48.946 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:20:48.946 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:48.956 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:20:48.956 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:48.956 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:20:48.956 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:48.966 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28984 150\n [Camera]
17-03-18 02:20:49.166 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:49.556 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:49.556 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:49.556 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:49.556 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:49.556 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) start.
17-03-18 02:20:49.556 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:49.556 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:49.556 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:49.556 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:49.556 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) start.
17-03-18 02:20:49.746 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28984 779
17-03-18 02:20:49.896 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:49.946 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2352550048, 0x0, 418435064) end. Duration was 388 ms.
17-03-18 02:20:49.946 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 02:20:49.946 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:49.946 -07 000000618 INF: Camera: sBCa_ReadImage(785074288, 2317127784, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 02:20:49.956 -07 000000618 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 393 ms.
17-03-18 02:20:49.956 -07 000000618 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:49.956 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:49.956 -07 000000618 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:49.956 -07 000000618 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 398 ms.
17-03-18 02:20:49.966 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 400 ms.
17-03-18 02:20:50.086 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:50.086 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:50.086 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:50.086 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:50.086 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) start.
17-03-18 02:20:50.096 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:50.096 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:50.096 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:50.096 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:50.096 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) start.
17-03-18 02:20:50.276 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:50.276 -07 000000591 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:50.276 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28984 150' command took 2 ms to send, 1309 ms to get response, and 1317 ms overall
17-03-18 02:20:50.286 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 02:20:50.286 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 5 at Y-position 62.3955078125, Z-Position -0.131886933866305. ------
17-03-18 02:20:50.286 -07 000000629 INF: Y Motor: MoveYZ optimized starting. Moving Y to 63.2326 mm, moving Z to -0.13860 mm
17-03-18 02:20:50.286 -07 000000629 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:50.286 -07 000000444 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:50.286 -07 000000462 INF: Y Motor: Entering MoveAbsStepped (target = 101172 steps, sync = True, waitForSettling = True)
17-03-18 02:20:50.286 -07 000000462 INF: Y Motor: Moving to 63.2326 mm, started at 62.3955 mm, delta = 0.8371 mm
17-03-18 02:20:50.286 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 30277, sync = True, waitForSettling = False)
17-03-18 02:20:50.286 -07 000000561 INF: Z Motor: Moving to -0.138599 mm, started at -0.131887 mm, distance = -6.71 um
17-03-18 02:20:50.286 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:50.296 -07 000000444 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:50.296 -07 000000561 INF: FPGA: Xmit ZDACW 30277\n [Z Motor]
17-03-18 02:20:50.296 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 02:20:50.306 -07 000000561 INF: FPGA: 'ZDACW 30277' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:50.306 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:50.306 -07 000000606 INF: FPGA: Recv ZDACR 30277
17-03-18 02:20:50.316 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:50.316 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:50.316 -07 000000561 INF: Z Motor: MoveAbsStepped took 20 ms (did NOT wait for settling yet))
17-03-18 02:20:50.316 -07 000000502 INF: FPGA: Recv YRDPOS 127786
17-03-18 02:20:50.326 -07 000000444 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:20:50.326 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 31 ms overall
17-03-18 02:20:50.326 -07 000000462 INF: Y Motor: Encoder = 127786 = motor step 99832.8 = 62.3955 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:50.326 -07 000000462 INF: Y Motor: Last commanded position = 62.4026 mm (99844.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:50.326 -07 000000462 INF: Y Motor: Moving 1339 steps-15
17-03-18 02:20:50.336 -07 000000462 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:50.466 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 2451345512, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:20:50.466 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 02:20:50.466 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:50.466 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2415923248, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 02:20:50.466 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:20:50.466 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:50.476 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:50.476 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:50.476 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:20:50.476 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 02:20:50.526 -07 000000591 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:20:50.536 -07 000000444 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 201 ms to get response, and 241 ms overall
17-03-18 02:20:50.706 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 02:20:50.706 -07 000000462 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 02:20:50.756 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:50.756 -07 000000444 INF: FPGA: Recv YRDPOS 129483
17-03-18 02:20:50.766 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:50.766 -07 000000462 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:50.766 -07 000000462 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 02:20:50.766 -07 000000462 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.837 mm, average velocity = 2.157 mm/sec
17-03-18 02:20:51.476 -07 000000444 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:51.476 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:51.716 -07 000000462 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:51.716 -07 000000467 INF: FPGA: Recv YRDPOS 129483
17-03-18 02:20:51.726 -07 000000462 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:51.726 -07 000000462 INF: Y Motor: Encoder = 129483 = motor step 101158.6 = 63.2241 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:51.746 -07 000000462 INF: Y Motor: After move to 63.232609, error = -0.008488, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:51.746 -07 000000462 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:51.746 -07 000000462 INF: Y Motor: Moved to 63.2241 after 1460 ms (table move)
17-03-18 02:20:51.756 -07 000000629 INF: Z Motor: EndOfMoveAbsStepped: target = -0.138599 mm (DAC = 30277)
17-03-18 02:20:51.756 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.756 -07 000000455 INF: FPGA: Recv ZSGSRD 30868
17-03-18 02:20:51.766 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:20:51.766 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.766 -07 000000444 INF: FPGA: Recv ZSGSRD 30858
17-03-18 02:20:51.776 -07 000000629 INF: FPGA: 'ZSGSRD' command took 1 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.776 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.776 -07 000000424 INF: FPGA: Recv ZSGSRD 30865
17-03-18 02:20:51.786 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.786 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.786 -07 000000430 INF: FPGA: Recv ZSGSRD 30864
17-03-18 02:20:51.796 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.796 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.796 -07 000000606 INF: FPGA: Recv ZSGSRD 30859
17-03-18 02:20:51.806 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.806 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.806 -07 000000618 INF: FPGA: Recv ZSGSRD 30863
17-03-18 02:20:51.816 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.816 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.816 -07 000000444 INF: FPGA: Recv ZSGSRD 30865
17-03-18 02:20:51.826 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.826 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.826 -07 000000424 INF: FPGA: Recv ZSGSRD 30860
17-03-18 02:20:51.836 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.836 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.836 -07 000000461 INF: FPGA: Recv ZSGSRD 30864
17-03-18 02:20:51.846 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.846 -07 000000629 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:51.846 -07 000000502 INF: FPGA: Recv ZSGSRD 30870
17-03-18 02:20:51.856 -07 000000629 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.856 -07 000000629 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:51.856 -07 000000618 INF: FPGA: Recv ZPIEZORD 26696
17-03-18 02:20:51.866 -07 000000629 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:51.866 -07 000000629 INF: Z Motor: Piezo is near 37.0 V (nominally 0 to 100 V), expect near 46.2 V, since DAC is at 4.620 V. Piezo Error = -9.2 V.
17-03-18 02:20:51.866 -07 000000629 INF: Z Motor: ReadAdcAverage: Commanded Z = -138.6 um, Read 10 ADC samples: Avg = 30864 (-137.8 uncal um), Error = 0.8 uncal um, Median = 30864 (-137.8 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30858 (-137.8 uncal um), Max = 30870 (-137.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:51.866 -07 000000629 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30864, posNoise = 6, negNoise = 6
17-03-18 02:20:51.866 -07 000000629 INF: Z Motor: After move to -0.138599, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:51.866 -07 000000629 INF: Z Motor: Settle wait time = 1463 ms, measure time = 108 ms (allowed 150 ms), total time = 1571 ms
17-03-18 02:20:51.866 -07 000000629 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:51.916 -07 000000629 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1623 ms
17-03-18 02:20:51.916 -07 000000629 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:51.916 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:51.916 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:51.916 -07 000000590 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:51.916 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:51.916 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:20:51.916 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:51.916 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 02:20:51.916 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:20:51.926 -07 000000569 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:20:51.926 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:20:51.926 -07 000000569 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 6 ms.
17-03-18 02:20:51.926 -07 000000569 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 12 ms.
17-03-18 02:20:51.936 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:20:51.976 -07 000000444 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:20:52.276 -07 000000626 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:20:52.276 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:20:52.276 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:20:52.276 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) start.
17-03-18 02:20:52.316 -07 000000569 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:20:52.316 -07 000000462 INF: FPGA: Recv CAMSNAP
17-03-18 02:20:52.316 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 375 ms to get response, and 385 ms overall
17-03-18 02:20:52.406 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 608668944, 0x0, 559484976) end. Duration was 126 ms.
17-03-18 02:20:52.406 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:52.406 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:20:52.406 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 128 ms.
17-03-18 02:20:52.416 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:20:52.416 -07 000000618 INF: Autofocus start
17-03-18 02:20:52.416 -07 000000618 INF: MeasureProfile start
17-03-18 02:20:52.416 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:20:52.426 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:20:52.426 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:20:52.426 -07 000000618 INF: MeasureProfile done
17-03-18 02:20:52.426 -07 000000618 INF: X=-16  Z correction [um]=-0.08128808
17-03-18 02:20:52.426 -07 000000618 INF: Autofocus finished
17-03-18 02:20:52.626 -07 000000424 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:20:52.626 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:20:52.626 -07 000000610 INF: ------------ Scan Snapping tile 5 at Y-position 63.22412109375, Z-position -0.138600235554445. ----------
17-03-18 02:20:52.626 -07 000000610 INF: Cycle	98	Tile	5	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:52.636 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28771, sync = True, waitForSettling = True)
17-03-18 02:20:52.636 -07 000000610 INF: Z Motor: Moving to -0.131705 mm, started at -0.138600 mm, distance = 6.90 um
17-03-18 02:20:52.636 -07 000000610 INF: FPGA: Xmit ZDACW 28771\n [Z Motor]
17-03-18 02:20:52.636 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:20:52.646 -07 000000610 INF: FPGA: 'ZDACW 28771' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:20:52.646 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:52.646 -07 000000561 INF: FPGA: Recv ZDACR 28771
17-03-18 02:20:52.656 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.656 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:52.806 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.806 -07 000000512 INF: FPGA: Recv ZSGSRD 29795
17-03-18 02:20:52.816 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.816 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.816 -07 000000618 INF: FPGA: Recv ZSGSRD 29791
17-03-18 02:20:52.826 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.826 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.826 -07 000000455 INF: FPGA: Recv ZSGSRD 29791
17-03-18 02:20:52.836 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.836 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.836 -07 000000576 INF: FPGA: Recv ZSGSRD 29788
17-03-18 02:20:52.846 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.846 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.846 -07 000000579 INF: FPGA: Recv ZSGSRD 29793
17-03-18 02:20:52.856 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.856 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.856 -07 000000590 INF: FPGA: Recv ZSGSRD 29797
17-03-18 02:20:52.866 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.866 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.866 -07 000000430 INF: FPGA: Recv ZSGSRD 29792
17-03-18 02:20:52.876 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.876 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.876 -07 000000591 INF: FPGA: Recv ZSGSRD 29792
17-03-18 02:20:52.886 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.886 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.886 -07 000000606 INF: FPGA: Recv ZSGSRD 29794
17-03-18 02:20:52.896 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.896 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:52.896 -07 000000461 INF: FPGA: Recv ZSGSRD 29792
17-03-18 02:20:52.906 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.906 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:52.906 -07 000000512 INF: FPGA: Recv ZPIEZORD 25312
17-03-18 02:20:52.916 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:52.916 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.390 V. Piezo Error = -9.8 V.
17-03-18 02:20:52.916 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.7 um, Read 10 ADC samples: Avg = 29792 (-130.9 uncal um), Error = 0.8 uncal um, Median = 29792 (-130.9 uncal um), StdDev = 2 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29788 (-130.9 uncal um), Max = 29797 (-131.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:20:52.916 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29792, posNoise = 5, negNoise = 4
17-03-18 02:20:52.916 -07 000000610 INF: Z Motor: After move to -0.131705, error = -0.000008, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:52.916 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 02:20:52.916 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:52.916 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:52.916 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:52.916 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:52.916 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:52.916 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:52.916 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:52.916 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:52.916 -07 000000579 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 2 ms.
17-03-18 02:20:52.916 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:52.916 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:52.916 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:52.926 -07 000000579 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 02:20:52.926 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:52.926 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:20:52.926 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:52.936 -07 000000579 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 11 ms.
17-03-18 02:20:52.936 -07 000000579 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:20:52.936 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 12 ms.
17-03-18 02:20:52.936 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:20:52.946 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28948 150\n [Camera]
17-03-18 02:20:53.146 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP turning red on 195
17-03-18 02:20:53.535 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:53.535 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:53.535 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:53.535 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:53.535 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) start.
17-03-18 02:20:53.535 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:53.535 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:53.535 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:53.535 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:53.535 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) start.
17-03-18 02:20:53.725 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28948 779
17-03-18 02:20:53.875 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:53.925 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 2486767776, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 02:20:53.925 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:20:53.925 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:53.925 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2550140976, 0x0, 418435064) end. Duration was 384 ms.
17-03-18 02:20:53.925 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 384 ms.
17-03-18 02:20:53.925 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:53.925 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:53.925 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 02:20:53.925 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:53.935 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 02:20:54.065 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:54.065 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:54.065 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:54.075 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:54.075 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:54.075 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) start.
17-03-18 02:20:54.075 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:54.075 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.014009,
17-03-18 02:20:54.075 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:54.075 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:54.075 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) start.
17-03-18 02:20:54.255 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:54.255 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:54.255 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28948 150' command took 3 ms to send, 1308 ms to get response, and 1318 ms overall
17-03-18 02:20:54.265 -07 000000610 INF: Skipping AutoFocus in Tile 6: adopting Best-Z from the cache: -0.131802
17-03-18 02:20:54.265 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.0626 mm, moving Z to -0.13180 mm
17-03-18 02:20:54.265 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:54.265 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 102500 steps, sync = True, waitForSettling = True)
17-03-18 02:20:54.265 -07 000000591 INF: Y Motor: Moving to 64.0626 mm, started at 63.2241 mm, delta = 0.8385 mm
17-03-18 02:20:54.265 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:54.265 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 28792, sync = True, waitForSettling = False)
17-03-18 02:20:54.265 -07 000000561 INF: Z Motor: Moving to -0.131801 mm, started at -0.131713 mm, distance = -0.09 um
17-03-18 02:20:54.265 -07 000000462 INF: FPGA: Recv YRDPOS 129484
17-03-18 02:20:54.275 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:54.275 -07 000000591 INF: Y Motor: Encoder = 129484 = motor step 101159.4 = 63.2246 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:54.275 -07 000000561 INF: FPGA: Xmit ZDACW 28792\n [Z Motor]
17-03-18 02:20:54.275 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 02:20:54.275 -07 000000591 INF: Y Motor: Last commanded position = 63.2326 mm (101172.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:54.275 -07 000000591 INF: Y Motor: Moving 1341 steps-17
17-03-18 02:20:54.285 -07 000000561 INF: FPGA: 'ZDACW 28792' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 02:20:54.285 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:54.285 -07 000000606 INF: FPGA: Recv ZDACR 28792
17-03-18 02:20:54.295 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:54.295 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:54.295 -07 000000561 INF: Z Motor: MoveAbsStepped took 25 ms (did NOT wait for settling yet))
17-03-18 02:20:54.455 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2585563240, 0x0, 391868352) end. Duration was 380 ms.
17-03-18 02:20:54.455 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:20:54.455 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:54.455 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2620985504, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 02:20:54.455 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 02:20:54.455 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:54.455 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:54.455 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:20:54.455 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:54.465 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:20:54.665 -07 000000618 INF: FPGA: Recv YMVTILE
17-03-18 02:20:54.665 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 393 ms overall
17-03-18 02:20:54.715 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:54.715 -07 000000462 INF: FPGA: Recv YRDPOS 131189
17-03-18 02:20:54.725 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:54.725 -07 000000591 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:54.725 -07 000000591 INF: Y Motor: Position error before settling (table move) = -11 encoder counts (-0.005 mm)
17-03-18 02:20:54.725 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 394 ms, distance = 0.838 mm, average velocity = 2.128 mm/sec
17-03-18 02:20:55.675 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:55.675 -07 000000618 INF: FPGA: Recv YRDPOS 131189
17-03-18 02:20:55.685 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:55.685 -07 000000591 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:55.705 -07 000000591 INF: Y Motor: After move to 64.062607, error = -0.005478, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:55.705 -07 000000591 INF: Y Motor: Position error after settling (table move) = -11 encoder counts (-0.005 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:55.705 -07 000000591 INF: Y Motor: Moved to 64.0571 after 1440 ms (table move)
17-03-18 02:20:55.705 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131801 mm (DAC = 28792)
17-03-18 02:20:55.705 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.715 -07 000000561 INF: FPGA: Recv ZSGSRD 29807
17-03-18 02:20:55.715 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 02:20:55.715 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.715 -07 000000430 INF: FPGA: Recv ZSGSRD 29804
17-03-18 02:20:55.725 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.725 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.725 -07 000000629 INF: FPGA: Recv ZSGSRD 29804
17-03-18 02:20:55.735 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.735 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.735 -07 000000579 INF: FPGA: Recv ZSGSRD 29810
17-03-18 02:20:55.745 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.745 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.745 -07 000000606 INF: FPGA: Recv ZSGSRD 29808
17-03-18 02:20:55.755 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.755 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.755 -07 000000461 INF: FPGA: Recv ZSGSRD 29807
17-03-18 02:20:55.765 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.765 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.765 -07 000000576 INF: FPGA: Recv ZSGSRD 29807
17-03-18 02:20:55.775 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.775 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.775 -07 000000591 INF: FPGA: Recv ZSGSRD 29801
17-03-18 02:20:55.785 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.785 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.785 -07 000000462 INF: FPGA: Recv ZSGSRD 29805
17-03-18 02:20:55.795 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.795 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:55.795 -07 000000606 INF: FPGA: Recv ZSGSRD 29806
17-03-18 02:20:55.805 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.805 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:55.805 -07 000000629 INF: FPGA: Recv ZPIEZORD 25384
17-03-18 02:20:55.815 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.815 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.9 V, since DAC is at 4.393 V. Piezo Error = -9.7 V.
17-03-18 02:20:55.815 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.8 um, Read 10 ADC samples: Avg = 29806 (-131.0 uncal um), Error = 0.8 uncal um, Median = 29806 (-131.0 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29801 (-131.0 uncal um), Max = 29810 (-131.0 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:20:55.815 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29806, posNoise = 4, negNoise = 5
17-03-18 02:20:55.815 -07 000000610 INF: Z Motor: After move to -0.131801, error = -0.000002, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:55.815 -07 000000610 INF: Z Motor: Settle wait time = 1442 ms, measure time = 103 ms (allowed 150 ms), total time = 1545 ms
17-03-18 02:20:55.815 -07 000000610 INF: Z Motor: Waiting extra 47 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:55.865 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 02:20:55.865 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:55.865 -07 000000610 INF: ------------ Scan Snapping tile 6 at Y-position 64.05712890625, Z-position -0.131803419108462. ----------
17-03-18 02:20:55.865 -07 000000610 INF: Cycle	98	Tile	6	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:55.865 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28615, sync = True, waitForSettling = True)
17-03-18 02:20:55.865 -07 000000610 INF: Z Motor: Moving to -0.130991 mm, started at -0.131803 mm, distance = 0.81 um
17-03-18 02:20:55.865 -07 000000610 INF: FPGA: Xmit ZDACW 28615\n [Z Motor]
17-03-18 02:20:55.865 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 02:20:55.875 -07 000000610 INF: FPGA: 'ZDACW 28615' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:20:55.875 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:55.875 -07 000000455 INF: FPGA: Recv ZDACR 28615
17-03-18 02:20:55.885 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:55.885 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:56.035 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.035 -07 000000502 INF: FPGA: Recv ZSGSRD 29681
17-03-18 02:20:56.045 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:56.045 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.045 -07 000000606 INF: FPGA: Recv ZSGSRD 29690
17-03-18 02:20:56.055 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.055 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.055 -07 000000629 INF: FPGA: Recv ZSGSRD 29683
17-03-18 02:20:56.065 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.065 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.065 -07 000000618 INF: FPGA: Recv ZSGSRD 29676
17-03-18 02:20:56.075 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.075 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.075 -07 000000455 INF: FPGA: Recv ZSGSRD 29684
17-03-18 02:20:56.085 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.085 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.085 -07 000000561 INF: FPGA: Recv ZSGSRD 29677
17-03-18 02:20:56.095 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.095 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.095 -07 000000576 INF: FPGA: Recv ZSGSRD 29683
17-03-18 02:20:56.105 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:20:56.105 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.105 -07 000000501 INF: FPGA: Recv ZSGSRD 29680
17-03-18 02:20:56.115 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.115 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.115 -07 000000569 INF: FPGA: Recv ZSGSRD 29681
17-03-18 02:20:56.125 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.125 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:56.125 -07 000000590 INF: FPGA: Recv ZSGSRD 29688
17-03-18 02:20:56.135 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.135 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:56.135 -07 000000626 INF: FPGA: Recv ZPIEZORD 25219
17-03-18 02:20:56.145 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:56.145 -07 000000610 INF: Z Motor: Piezo is near 33.9 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.366 V. Piezo Error = -9.8 V.
17-03-18 02:20:56.145 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.0 um, Read 10 ADC samples: Avg = 29682 (-130.2 uncal um), Error = 0.8 uncal um, Median = 29682 (-130.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29676 (-130.2 uncal um), Max = 29690 (-130.3 uncal um), Pos Noise = 8 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:56.145 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29682, posNoise = 8, negNoise = 6
17-03-18 02:20:56.145 -07 000000610 INF: Z Motor: After move to -0.130991, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:56.145 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:20:56.145 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:56.145 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:56.145 -07 000000512 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:56.145 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:56.145 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:56.145 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:56.145 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:56.145 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:56.145 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 02:20:56.145 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:56.145 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:56.145 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:56.155 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:56.155 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:56.155 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:56.155 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:56.165 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 02:20:56.165 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 02:20:56.165 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 02:20:56.165 -07 000000606 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 02:20:56.165 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28792 150\n [Camera]
17-03-18 02:20:56.365 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:56.475 -07 000000467 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:20:56.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:20:56.755 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:56.755 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:56.755 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:56.755 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:56.755 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) start.
17-03-18 02:20:56.765 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:56.765 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:56.765 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:56.765 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:56.765 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) start.
17-03-18 02:20:56.955 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28792 779
17-03-18 02:20:57.105 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:20:57.135 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2684358704, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:20:57.135 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 02:20:57.135 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:57.135 -07 000000579 INF: Camera: sBCa_ReadImage(785074704, 2719780968, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:20:57.135 -07 000000579 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 02:20:57.135 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:57.145 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:57.145 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 381 ms.
17-03-18 02:20:57.145 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:20:57.145 -07 000000579 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 02:20:57.295 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:20:57.295 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:20:57.295 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:57.295 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:57.295 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) start.
17-03-18 02:20:57.295 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:20:57.295 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:20:57.295 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:57.295 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:57.295 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) start.
17-03-18 02:20:57.485 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:20:57.485 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:20:57.485 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28792 150' command took 2 ms to send, 1312 ms to get response, and 1317 ms overall
17-03-18 02:20:57.485 -07 000000610 INF: Skipping AutoFocus in Tile 7: adopting Best-Z from the cache: -0.131503
17-03-18 02:20:57.485 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 64.8926 mm, moving Z to -0.13150 mm
17-03-18 02:20:57.485 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:20:57.485 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 103828 steps, sync = True, waitForSettling = True)
17-03-18 02:20:57.485 -07 000000512 INF: Y Motor: Moving to 64.8926 mm, started at 64.0571 mm, delta = 0.8355 mm
17-03-18 02:20:57.485 -07 000000576 INF: Z Motor: Entering MoveAbsStepped (DAC = 28727, sync = True, waitForSettling = False)
17-03-18 02:20:57.485 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:57.485 -07 000000576 INF: Z Motor: Moving to -0.131504 mm, started at -0.131007 mm, distance = -0.50 um
17-03-18 02:20:57.495 -07 000000576 INF: FPGA: Xmit ZDACW 28727\n [Z Motor]
17-03-18 02:20:57.495 -07 000000561 INF: FPGA: Recv YRDPOS 131189
17-03-18 02:20:57.495 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 2 ms to get response, and 3 ms overall
17-03-18 02:20:57.495 -07 000000512 INF: Y Motor: Encoder = 131189 = motor step 102491.4 = 64.0571 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:57.495 -07 000000512 INF: Y Motor: Last commanded position = 64.0626 mm (102500.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:20:57.495 -07 000000512 INF: Y Motor: Moving 1337 steps-11
17-03-18 02:20:57.495 -07 000000591 INF: FPGA: Recv ZDACW
17-03-18 02:20:57.505 -07 000000576 INF: FPGA: 'ZDACW 28727' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:57.505 -07 000000576 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:57.505 -07 000000626 INF: FPGA: Recv ZDACR 28727
17-03-18 02:20:57.515 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:20:57.515 -07 000000576 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:57.515 -07 000000576 INF: Z Motor: MoveAbsStepped took 21 ms (did NOT wait for settling yet))
17-03-18 02:20:57.675 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2818576432, 0x0, 418435064) end. Duration was 380 ms.
17-03-18 02:20:57.675 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 380 ms.
17-03-18 02:20:57.675 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:57.675 -07 000000579 INF: Camera: sBCa_ReadImage(785074288, 2755203232, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 02:20:57.675 -07 000000579 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:20:57.675 -07 000000579 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:20:57.675 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:57.685 -07 000000579 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:20:57.685 -07 000000579 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 02:20:57.685 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 391 ms.
17-03-18 02:20:57.885 -07 000000626 INF: FPGA: Recv YMVTILE
17-03-18 02:20:57.885 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 395 ms overall
17-03-18 02:20:57.935 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:57.945 -07 000000590 INF: FPGA: Recv YRDPOS 132872
17-03-18 02:20:57.945 -07 000000512 INF: FPGA: 'YRDPOS' command took 1 ms to send, 3 ms to get response, and 7 ms overall
17-03-18 02:20:57.945 -07 000000512 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:57.945 -07 000000512 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 02:20:57.945 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 396 ms, distance = 0.835 mm, average velocity = 2.110 mm/sec
17-03-18 02:20:58.895 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:20:58.895 -07 000000576 INF: FPGA: Recv YRDPOS 132872
17-03-18 02:20:58.905 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:58.905 -07 000000512 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:20:58.925 -07 000000512 INF: Y Motor: After move to 64.892609, error = -0.013702, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:20:58.925 -07 000000512 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:20:58.925 -07 000000512 INF: Y Motor: Moved to 64.8789 after 1439 ms (table move)
17-03-18 02:20:58.935 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131504 mm (DAC = 28727)
17-03-18 02:20:58.935 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.935 -07 000000424 INF: FPGA: Recv ZSGSRD 29756
17-03-18 02:20:58.945 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:58.945 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.945 -07 000000467 INF: FPGA: Recv ZSGSRD 29760
17-03-18 02:20:58.955 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:58.955 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.955 -07 000000591 INF: FPGA: Recv ZSGSRD 29761
17-03-18 02:20:58.965 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:58.965 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.965 -07 000000618 INF: FPGA: Recv ZSGSRD 29762
17-03-18 02:20:58.975 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:58.975 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.975 -07 000000561 INF: FPGA: Recv ZSGSRD 29764
17-03-18 02:20:58.985 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:58.985 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.985 -07 000000461 INF: FPGA: Recv ZSGSRD 29765
17-03-18 02:20:58.995 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:58.995 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:58.995 -07 000000455 INF: FPGA: Recv ZSGSRD 29758
17-03-18 02:20:59.005 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.005 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.005 -07 000000502 INF: FPGA: Recv ZSGSRD 29755
17-03-18 02:20:59.015 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.015 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.015 -07 000000501 INF: FPGA: Recv ZSGSRD 29751
17-03-18 02:20:59.025 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.025 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.025 -07 000000606 INF: FPGA: Recv ZSGSRD 29765
17-03-18 02:20:59.035 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.035 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:59.035 -07 000000461 INF: FPGA: Recv ZPIEZORD 25326
17-03-18 02:20:59.045 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.045 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.383 V. Piezo Error = -9.7 V.
17-03-18 02:20:59.045 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.5 um, Read 10 ADC samples: Avg = 29760 (-130.7 uncal um), Error = 0.8 uncal um, Median = 29760 (-130.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29751 (-130.7 uncal um), Max = 29765 (-130.8 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 9 (0.1 uncal um)
17-03-18 02:20:59.045 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29760, posNoise = 5, negNoise = 9
17-03-18 02:20:59.045 -07 000000610 INF: Z Motor: After move to -0.131504, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:59.045 -07 000000610 INF: Z Motor: Settle wait time = 1441 ms, measure time = 110 ms (allowed 150 ms), total time = 1551 ms
17-03-18 02:20:59.045 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:20:59.085 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1593 ms
17-03-18 02:20:59.085 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:20:59.085 -07 000000610 INF: ------------ Scan Snapping tile 7 at Y-position 64.87890625, Z-position -0.131507905349941. ----------
17-03-18 02:20:59.085 -07 000000610 INF: Cycle	98	Tile	7	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:20:59.085 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28550, sync = True, waitForSettling = True)
17-03-18 02:20:59.085 -07 000000610 INF: Z Motor: Moving to -0.130694 mm, started at -0.131508 mm, distance = 0.81 um
17-03-18 02:20:59.085 -07 000000610 INF: FPGA: Xmit ZDACW 28550\n [Z Motor]
17-03-18 02:20:59.085 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 02:20:59.095 -07 000000610 INF: FPGA: 'ZDACW 28550' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:20:59.095 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:20:59.095 -07 000000591 INF: FPGA: Recv ZDACR 28550
17-03-18 02:20:59.105 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.105 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:20:59.255 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.255 -07 000000502 INF: FPGA: Recv ZSGSRD 29638
17-03-18 02:20:59.265 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:59.265 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.265 -07 000000579 INF: FPGA: Recv ZSGSRD 29636
17-03-18 02:20:59.275 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.275 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.275 -07 000000561 INF: FPGA: Recv ZSGSRD 29637
17-03-18 02:20:59.285 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.285 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.285 -07 000000576 INF: FPGA: Recv ZSGSRD 29640
17-03-18 02:20:59.295 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.295 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.295 -07 000000569 INF: FPGA: Recv ZSGSRD 29633
17-03-18 02:20:59.305 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:20:59.305 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.305 -07 000000502 INF: FPGA: Recv ZSGSRD 29641
17-03-18 02:20:59.315 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.315 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.315 -07 000000455 INF: FPGA: Recv ZSGSRD 29634
17-03-18 02:20:59.325 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.325 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.325 -07 000000591 INF: FPGA: Recv ZSGSRD 29631
17-03-18 02:20:59.335 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.335 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.335 -07 000000501 INF: FPGA: Recv ZSGSRD 29630
17-03-18 02:20:59.345 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.345 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:20:59.345 -07 000000512 INF: FPGA: Recv ZSGSRD 29637
17-03-18 02:20:59.355 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.355 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:20:59.355 -07 000000629 INF: FPGA: Recv ZPIEZORD 25171
17-03-18 02:20:59.365 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:20:59.365 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.356 V. Piezo Error = -9.8 V.
17-03-18 02:20:59.365 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29636 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29636 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29630 (-129.9 uncal um), Max = 29641 (-130.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:20:59.365 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29636, posNoise = 5, negNoise = 6
17-03-18 02:20:59.365 -07 000000610 INF: Z Motor: After move to -0.130694, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:20:59.365 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:20:59.365 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:20:59.365 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:20:59.365 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:20:59.365 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:20:59.365 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:20:59.365 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:20:59.365 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:20:59.365 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:20:59.365 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:20:59.365 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:20:59.365 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:20:59.365 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:20:59.375 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:20:59.375 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:20:59.375 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:20:59.375 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:20:59.385 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 15 ms.
17-03-18 02:20:59.385 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:20:59.385 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 02:20:59.385 -07 000000569 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:20:59.395 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28727 150\n [Camera]
17-03-18 02:20:59.435 -07 000000444 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.98264,
17-03-18 02:20:59.595 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:20:59.985 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:20:59.985 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:20:59.985 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:20:59.985 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:20:59.985 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) start.
17-03-18 02:20:59.985 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:20:59.985 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:20:59.985 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:20:59.985 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:20:59.985 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) start.
17-03-18 02:21:00.175 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28727 779
17-03-18 02:21:00.325 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:00.365 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2889420960, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:21:00.365 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:21:00.365 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:00.365 -07 000000606 INF: Camera: sBCa_ReadImage(785074288, 2853998696, 0x0, 391868352) end. Duration was 376 ms.
17-03-18 02:21:00.365 -07 000000606 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 02:21:00.365 -07 000000606 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:00.365 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:00.365 -07 000000606 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:00.365 -07 000000606 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 383 ms.
17-03-18 02:21:00.375 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 02:21:00.515 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:00.515 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:00.515 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:00.515 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:00.515 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) start.
17-03-18 02:21:00.515 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:00.515 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:00.515 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:00.525 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:00.525 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) start.
17-03-18 02:21:00.705 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:00.705 -07 000000467 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:00.705 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28727 150' command took 2 ms to send, 1308 ms to get response, and 1317 ms overall
17-03-18 02:21:00.705 -07 000000610 INF: Skipping AutoFocus in Tile 8: adopting Best-Z from the cache: -0.131349
17-03-18 02:21:00.715 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 65.7226 mm, moving Z to -0.13135 mm
17-03-18 02:21:00.715 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:00.715 -07 000000629 INF: Y Motor: Entering MoveAbsStepped (target = 105156 steps, sync = True, waitForSettling = True)
17-03-18 02:21:00.715 -07 000000629 INF: Y Motor: Moving to 65.7226 mm, started at 64.8789 mm, delta = 0.8437 mm
17-03-18 02:21:00.715 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:00.715 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 28693, sync = True, waitForSettling = False)
17-03-18 02:21:00.715 -07 000000512 INF: Z Motor: Moving to -0.131348 mm, started at -0.130711 mm, distance = -0.64 um
17-03-18 02:21:00.715 -07 000000626 INF: FPGA: Recv YRDPOS 132872
17-03-18 02:21:00.725 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:21:00.725 -07 000000629 INF: Y Motor: Encoder = 132872 = motor step 103806.3 = 64.8789 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:00.725 -07 000000629 INF: Y Motor: Last commanded position = 64.8926 mm (103828.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:00.725 -07 000000629 INF: Y Motor: Moving 1350 steps-28
17-03-18 02:21:00.725 -07 000000512 INF: FPGA: Xmit ZDACW 28693\n [Z Motor]
17-03-18 02:21:00.725 -07 000000444 INF: FPGA: Recv ZDACW
17-03-18 02:21:00.735 -07 000000629 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:00.735 -07 000000512 INF: FPGA: 'ZDACW 28693' command took 1 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 02:21:00.745 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:00.745 -07 000000501 INF: FPGA: Recv ZDACR 28693
17-03-18 02:21:00.755 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:00.755 -07 000000512 INF: Z Motor: MoveAbsStepped took 32 ms (did NOT wait for settling yet))
17-03-18 02:21:00.915 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 2988216424, 0x0, 418435064) end. Duration was 395 ms.
17-03-18 02:21:00.915 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 02:21:00.915 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:00.915 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 2952794160, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 02:21:00.915 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 02:21:00.915 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:00.925 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 02:21:00.925 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 7 ms.
17-03-18 02:21:00.925 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 407 ms.
17-03-18 02:21:00.935 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 414 ms.
17-03-18 02:21:01.105 -07 000000591 INF: FPGA: Recv YMVTILE
17-03-18 02:21:01.105 -07 000000629 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 388 ms overall
17-03-18 02:21:01.155 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:01.155 -07 000000502 INF: FPGA: Recv YRDPOS 134583
17-03-18 02:21:01.165 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:21:01.165 -07 000000629 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:01.165 -07 000000629 INF: Y Motor: Position error before settling (table move) = -17 encoder counts (-0.008 mm)
17-03-18 02:21:01.165 -07 000000629 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 388 ms, distance = 0.844 mm, average velocity = 2.174 mm/sec
17-03-18 02:21:01.475 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:01.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:02.115 -07 000000629 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:02.115 -07 000000455 INF: FPGA: Recv YRDPOS 134583
17-03-18 02:21:02.125 -07 000000629 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:02.125 -07 000000629 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:02.155 -07 000000629 INF: Y Motor: After move to 65.722610, error = -0.008255, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:02.155 -07 000000629 INF: Y Motor: Position error after settling (table move) = -17 encoder counts (-0.008 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:02.155 -07 000000629 INF: Y Motor: Moved to 65.7144 after 1436 ms (table move)
17-03-18 02:21:02.155 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131348 mm (DAC = 28693)
17-03-18 02:21:02.155 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.155 -07 000000444 INF: FPGA: Recv ZSGSRD 29729
17-03-18 02:21:02.165 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:02.165 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.165 -07 000000502 INF: FPGA: Recv ZSGSRD 29736
17-03-18 02:21:02.175 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.175 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.175 -07 000000424 INF: FPGA: Recv ZSGSRD 29735
17-03-18 02:21:02.185 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.185 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.185 -07 000000430 INF: FPGA: Recv ZSGSRD 29735
17-03-18 02:21:02.195 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.195 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.195 -07 000000461 INF: FPGA: Recv ZSGSRD 29730
17-03-18 02:21:02.205 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.205 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.205 -07 000000569 INF: FPGA: Recv ZSGSRD 29731
17-03-18 02:21:02.215 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.215 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.215 -07 000000467 INF: FPGA: Recv ZSGSRD 29736
17-03-18 02:21:02.225 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.225 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.225 -07 000000424 INF: FPGA: Recv ZSGSRD 29738
17-03-18 02:21:02.235 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.235 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.235 -07 000000590 INF: FPGA: Recv ZSGSRD 29730
17-03-18 02:21:02.245 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.245 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.245 -07 000000629 INF: FPGA: Recv ZSGSRD 29735
17-03-18 02:21:02.255 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.255 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:02.255 -07 000000444 INF: FPGA: Recv ZPIEZORD 25352
17-03-18 02:21:02.265 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.265 -07 000000610 INF: Z Motor: Piezo is near 34.2 V (nominally 0 to 100 V), expect near 43.8 V, since DAC is at 4.378 V. Piezo Error = -9.6 V.
17-03-18 02:21:02.265 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.3 um, Read 10 ADC samples: Avg = 29734 (-130.6 uncal um), Error = 0.8 uncal um, Median = 29735 (-130.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29729 (-130.5 uncal um), Max = 29738 (-130.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:21:02.265 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29734, posNoise = 4, negNoise = 5
17-03-18 02:21:02.265 -07 000000610 INF: Z Motor: After move to -0.131348, error = 0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:02.265 -07 000000610 INF: Z Motor: Settle wait time = 1435 ms, measure time = 108 ms (allowed 150 ms), total time = 1543 ms
17-03-18 02:21:02.265 -07 000000610 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:02.315 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1599 ms
17-03-18 02:21:02.315 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:02.315 -07 000000610 INF: ------------ Scan Snapping tile 8 at Y-position 65.71435546875, Z-position -0.131340875834255. ----------
17-03-18 02:21:02.315 -07 000000610 INF: Cycle	98	Tile	8	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:02.315 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28516, sync = True, waitForSettling = True)
17-03-18 02:21:02.315 -07 000000610 INF: Z Motor: Moving to -0.130538 mm, started at -0.131341 mm, distance = 0.80 um
17-03-18 02:21:02.315 -07 000000610 INF: FPGA: Xmit ZDACW 28516\n [Z Motor]
17-03-18 02:21:02.315 -07 000000561 INF: FPGA: Recv ZDACW
17-03-18 02:21:02.325 -07 000000610 INF: FPGA: 'ZDACW 28516' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:02.325 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:02.325 -07 000000606 INF: FPGA: Recv ZDACR 28516
17-03-18 02:21:02.335 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.335 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:02.485 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.485 -07 000000462 INF: FPGA: Recv ZSGSRD 29616
17-03-18 02:21:02.495 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:02.495 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.495 -07 000000576 INF: FPGA: Recv ZSGSRD 29612
17-03-18 02:21:02.505 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.505 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.505 -07 000000444 INF: FPGA: Recv ZSGSRD 29608
17-03-18 02:21:02.515 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.515 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.515 -07 000000455 INF: FPGA: Recv ZSGSRD 29614
17-03-18 02:21:02.525 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.525 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.525 -07 000000626 INF: FPGA: Recv ZSGSRD 29607
17-03-18 02:21:02.535 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.535 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.535 -07 000000501 INF: FPGA: Recv ZSGSRD 29605
17-03-18 02:21:02.545 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.545 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.545 -07 000000502 INF: FPGA: Recv ZSGSRD 29618
17-03-18 02:21:02.555 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.555 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.555 -07 000000569 INF: FPGA: Recv ZSGSRD 29618
17-03-18 02:21:02.565 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.565 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.565 -07 000000579 INF: FPGA: Recv ZSGSRD 29612
17-03-18 02:21:02.575 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.575 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:02.575 -07 000000512 INF: FPGA: Recv ZSGSRD 29606
17-03-18 02:21:02.585 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.585 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:02.585 -07 000000561 INF: FPGA: Recv ZPIEZORD 25163
17-03-18 02:21:02.595 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:02.595 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.351 V. Piezo Error = -9.8 V.
17-03-18 02:21:02.595 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.5 um, Read 10 ADC samples: Avg = 29612 (-129.8 uncal um), Error = 0.8 uncal um, Median = 29612 (-129.8 uncal um), StdDev = 5 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29605 (-129.7 uncal um), Max = 29618 (-129.8 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:21:02.595 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29612, posNoise = 6, negNoise = 7
17-03-18 02:21:02.595 -07 000000610 INF: Z Motor: After move to -0.130538, error = -0.000019, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:02.595 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:21:02.595 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:02.595 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:02.595 -07 000000461 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:02.595 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:02.595 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:02.595 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:02.595 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:02.595 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:02.595 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:02.595 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:02.595 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:02.595 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:02.605 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:02.605 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:02.605 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:21:02.605 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:02.615 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:21:02.615 -07 000000512 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:21:02.615 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:21:02.615 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 22 ms.
17-03-18 02:21:02.625 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28693 150\n [Camera]
17-03-18 02:21:02.825 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:03.215 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:03.215 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:03.215 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:03.215 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:03.215 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) start.
17-03-18 02:21:03.215 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:03.215 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:03.225 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:03.225 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:03.225 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) start.
17-03-18 02:21:03.405 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28693 779
17-03-18 02:21:03.555 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:03.595 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 3023638688, 0x0, 391868352) end. Duration was 378 ms.
17-03-18 02:21:03.595 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 02:21:03.595 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:03.595 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:03.595 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:21:03.605 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) end. Duration was 378 ms.
17-03-18 02:21:03.605 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 379 ms.
17-03-18 02:21:03.605 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:03.605 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:03.615 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 389 ms.
17-03-18 02:21:03.745 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:03.745 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:03.745 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:03.745 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:03.745 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 3122434152, 0x0, 391868352) start.
17-03-18 02:21:03.755 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:03.755 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:03.755 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:03.915 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:03.915 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 02:21:03.935 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:03.935 -07 000000576 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:03.935 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28693 150' command took 2 ms to send, 1309 ms to get response, and 1317 ms overall
17-03-18 02:21:03.945 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 02:21:03.945 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 9 at Y-position 65.71435546875, Z-Position -0.13055712195296. ------
17-03-18 02:21:03.945 -07 000000462 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:21:03.945 -07 000000579 INF: Y Motor: MoveYZ optimized starting. Moving Y to 66.5526 mm, moving Z to -0.13695 mm
17-03-18 02:21:03.945 -07 000000579 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:03.945 -07 000000576 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:21:03.945 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 29917, sync = True, waitForSettling = False)
17-03-18 02:21:03.945 -07 000000561 INF: Z Motor: Moving to -0.136951 mm, started at -0.130557 mm, distance = -6.39 um
17-03-18 02:21:03.945 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 106484 steps, sync = True, waitForSettling = True)
17-03-18 02:21:03.945 -07 000000591 INF: Y Motor: Moving to 66.5526 mm, started at 65.7144 mm, delta = 0.8382 mm
17-03-18 02:21:03.955 -07 000000462 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:21:03.955 -07 000000561 INF: FPGA: Xmit ZDACW 29917\n [Z Motor]
17-03-18 02:21:03.955 -07 000000502 INF: FPGA: Recv ZDACW
17-03-18 02:21:03.965 -07 000000561 INF: FPGA: 'ZDACW 29917' command took 0 ms to send, 0 ms to get response, and 12 ms overall
17-03-18 02:21:03.965 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:03.965 -07 000000626 INF: FPGA: Recv YRDPOS 134583
17-03-18 02:21:03.975 -07 000000462 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:21:03.975 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 21 ms overall
17-03-18 02:21:03.975 -07 000000591 INF: Y Motor: Encoder = 134583 = motor step 105143.0 = 65.7144 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:03.975 -07 000000591 INF: Y Motor: Last commanded position = 65.7226 mm (105156.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:03.975 -07 000000591 INF: Y Motor: Moving 1341 steps-17
17-03-18 02:21:03.985 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:03.985 -07 000000626 INF: FPGA: Recv ZDACR 29917
17-03-18 02:21:03.995 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:03.995 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:21:03.995 -07 000000561 INF: Z Motor: MoveAbsStepped took 45 ms (did NOT wait for settling yet))
17-03-18 02:21:04.155 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 3122434152, 0x0, 391868352) end. Duration was 406 ms.
17-03-18 02:21:04.155 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 406 ms.
17-03-18 02:21:04.155 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:04.155 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:04.155 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 410 ms.
17-03-18 02:21:04.175 -07 000000455 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:21:04.175 -07 000000462 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 192 ms to get response, and 222 ms overall
17-03-18 02:21:04.285 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 372 ms.
17-03-18 02:21:04.285 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 02:21:04.285 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:04.285 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:04.295 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 543 ms.
17-03-18 02:21:04.375 -07 000000462 INF: FPGA: Recv YMVTILE
17-03-18 02:21:04.375 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 3 ms to send, 371 ms to get response, and 400 ms overall
17-03-18 02:21:04.415 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:04.415 -07 000000430 INF: FPGA: Recv YRDPOS 136271
17-03-18 02:21:04.425 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:04.425 -07 000000591 INF: Y Motor: Encoder = 136271 = motor step 106461.7 = 66.5386 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:04.425 -07 000000591 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 02:21:04.425 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 400 ms, distance = 0.838 mm, average velocity = 2.096 mm/sec
17-03-18 02:21:04.795 -07 000000618 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 3.988112,
17-03-18 02:21:05.375 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:05.375 -07 000000501 INF: FPGA: Recv YRDPOS 136272
17-03-18 02:21:05.385 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:05.385 -07 000000591 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:05.405 -07 000000591 INF: Y Motor: After move to 66.552605, error = -0.013542, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:05.405 -07 000000591 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:21:05.405 -07 000000591 INF: Y Motor: Moved to 66.5391 after 1461 ms (table move)
17-03-18 02:21:05.415 -07 000000579 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136951 mm (DAC = 29917)
17-03-18 02:21:05.415 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.415 -07 000000461 INF: FPGA: Recv ZSGSRD 30600
17-03-18 02:21:05.425 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:05.425 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.425 -07 000000576 INF: FPGA: Recv ZSGSRD 30605
17-03-18 02:21:05.435 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.435 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.435 -07 000000444 INF: FPGA: Recv ZSGSRD 30605
17-03-18 02:21:05.445 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.445 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.445 -07 000000512 INF: FPGA: Recv ZSGSRD 30603
17-03-18 02:21:05.455 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.455 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.455 -07 000000591 INF: FPGA: Recv ZSGSRD 30607
17-03-18 02:21:05.465 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.465 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.465 -07 000000606 INF: FPGA: Recv ZSGSRD 30614
17-03-18 02:21:05.475 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.475 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.475 -07 000000561 INF: FPGA: Recv ZSGSRD 30609
17-03-18 02:21:05.485 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.485 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.485 -07 000000576 INF: FPGA: Recv ZSGSRD 30609
17-03-18 02:21:05.495 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:05.495 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.495 -07 000000461 INF: FPGA: Recv ZSGSRD 30612
17-03-18 02:21:05.505 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.505 -07 000000579 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:05.505 -07 000000591 INF: FPGA: Recv ZSGSRD 30612
17-03-18 02:21:05.515 -07 000000579 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.515 -07 000000579 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:05.515 -07 000000502 INF: FPGA: Recv ZPIEZORD 26476
17-03-18 02:21:05.525 -07 000000579 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:05.525 -07 000000579 INF: Z Motor: Piezo is near 36.6 V (nominally 0 to 100 V), expect near 45.7 V, since DAC is at 4.565 V. Piezo Error = -9.1 V.
17-03-18 02:21:05.525 -07 000000579 INF: Z Motor: ReadAdcAverage: Commanded Z = -137.0 um, Read 10 ADC samples: Avg = 30608 (-136.2 uncal um), Error = 0.8 uncal um, Median = 30608 (-136.2 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 30600 (-136.1 uncal um), Max = 30614 (-136.2 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:21:05.525 -07 000000579 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30608, posNoise = 6, negNoise = 8
17-03-18 02:21:05.525 -07 000000579 INF: Z Motor: After move to -0.136951, error = -0.000004, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:05.525 -07 000000579 INF: Z Motor: Settle wait time = 1465 ms, measure time = 109 ms (allowed 150 ms), total time = 1574 ms
17-03-18 02:21:05.525 -07 000000579 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:05.575 -07 000000579 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1625 ms
17-03-18 02:21:05.575 -07 000000579 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:05.575 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:05.575 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:05.575 -07 000000561 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:05.575 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:21:05.575 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:05.575 -07 000000467 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:05.575 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 0 ms.
17-03-18 02:21:05.575 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:21:05.585 -07 000000512 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:21:05.585 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:21:05.595 -07 000000512 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 02:21:05.595 -07 000000512 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 17 ms.
17-03-18 02:21:05.595 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:21:05.645 -07 000000461 INF: FPGA: Recv @CAMSNAP turning led on 43
17-03-18 02:21:05.945 -07 000000501 INF: FPGA: Recv @CAMSNAP img rdy 343
17-03-18 02:21:05.945 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 343
17-03-18 02:21:05.945 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:21:05.945 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-18 02:21:05.985 -07 000000461 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:21:05.985 -07 000000606 INF: FPGA: Recv CAMSNAP
17-03-18 02:21:05.985 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 384 ms overall
17-03-18 02:21:06.065 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 119 ms.
17-03-18 02:21:06.065 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:06.065 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:21:06.065 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 122 ms.
17-03-18 02:21:06.085 -07 000000444 INF: Autofocus start
17-03-18 02:21:06.085 -07 000000444 INF: MeasureProfile start
17-03-18 02:21:06.085 -07 000000591 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:21:06.085 -07 000000512 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:21:06.095 -07 000000591 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:06.095 -07 000000591 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:21:06.095 -07 000000444 INF: MeasureProfile done
17-03-18 02:21:06.095 -07 000000444 INF: X=48  Z correction [um]=0.2069503
17-03-18 02:21:06.095 -07 000000444 INF: Autofocus finished
17-03-18 02:21:06.295 -07 000000501 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:21:06.295 -07 000000591 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:21:06.295 -07 000000610 INF: ------------ Scan Snapping tile 9 at Y-position 66.5390625, Z-position -0.136955637246154. ----------
17-03-18 02:21:06.295 -07 000000610 INF: Cycle	98	Tile	9	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:06.305 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28475, sync = True, waitForSettling = True)
17-03-18 02:21:06.305 -07 000000610 INF: Z Motor: Moving to -0.130350 mm, started at -0.136956 mm, distance = 6.61 um
17-03-18 02:21:06.305 -07 000000610 INF: FPGA: Xmit ZDACW 28475\n [Z Motor]
17-03-18 02:21:06.305 -07 000000629 INF: FPGA: Recv ZDACW
17-03-18 02:21:06.315 -07 000000610 INF: FPGA: 'ZDACW 28475' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:06.315 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:06.315 -07 000000461 INF: FPGA: Recv ZDACR 28475
17-03-18 02:21:06.325 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.325 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:06.475 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.475 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:06.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:06.475 -07 000000569 INF: FPGA: Recv ZSGSRD 29580
17-03-18 02:21:06.485 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:06.485 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.485 -07 000000461 INF: FPGA: Recv ZSGSRD 29579
17-03-18 02:21:06.495 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.495 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.495 -07 000000501 INF: FPGA: Recv ZSGSRD 29588
17-03-18 02:21:06.505 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.505 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.505 -07 000000606 INF: FPGA: Recv ZSGSRD 29581
17-03-18 02:21:06.515 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.515 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.515 -07 000000512 INF: FPGA: Recv ZSGSRD 29585
17-03-18 02:21:06.525 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.525 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.525 -07 000000629 INF: FPGA: Recv ZSGSRD 29581
17-03-18 02:21:06.535 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.535 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.535 -07 000000576 INF: FPGA: Recv ZSGSRD 29583
17-03-18 02:21:06.545 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.545 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.545 -07 000000590 INF: FPGA: Recv ZSGSRD 29575
17-03-18 02:21:06.555 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.555 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.555 -07 000000444 INF: FPGA: Recv ZSGSRD 29579
17-03-18 02:21:06.565 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.565 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:06.565 -07 000000591 INF: FPGA: Recv ZSGSRD 29585
17-03-18 02:21:06.575 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.575 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:06.575 -07 000000569 INF: FPGA: Recv ZPIEZORD 25114
17-03-18 02:21:06.585 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:06.585 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.345 V. Piezo Error = -9.8 V.
17-03-18 02:21:06.585 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29582 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29581 (-129.6 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29575 (-129.5 uncal um), Max = 29588 (-129.6 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:21:06.585 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29582, posNoise = 6, negNoise = 7
17-03-18 02:21:06.585 -07 000000610 INF: Z Motor: After move to -0.130350, error = -0.000014, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:06.585 -07 000000610 INF: Z Motor: MoveAbsStepped took 279 ms)
17-03-18 02:21:06.585 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:06.585 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:06.585 -07 000000501 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:06.585 -07 000000502 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:06.585 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:06.585 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:06.585 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:06.585 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:06.585 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:06.585 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:06.585 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:06.585 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:06.595 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:06.595 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:06.595 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:06.595 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:06.605 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 02:21:06.605 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 02:21:06.605 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 02:21:06.605 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 02:21:06.605 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28651 150\n [Camera]
17-03-18 02:21:06.805 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:07.195 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:07.195 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:07.195 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:07.205 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:07.205 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:07.205 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:07.205 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:07.205 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:21:07.205 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:07.205 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) start.
17-03-18 02:21:07.395 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28651 779
17-03-18 02:21:07.535 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:07.575 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 374 ms.
17-03-18 02:21:07.575 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 374 ms.
17-03-18 02:21:07.575 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:07.585 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:07.585 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:21:07.585 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 3087011888, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:21:07.585 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:21:07.585 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:07.585 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:07.595 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:21:07.725 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:07.725 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:07.735 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:07.845 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:07.845 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:07.845 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:07.845 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:07.845 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 02:21:07.855 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:07.855 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:21:07.925 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:21:07.925 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:07.925 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28651 150' command took 2 ms to send, 1311 ms to get response, and 1317 ms overall
17-03-18 02:21:07.925 -07 000000610 INF: Skipping AutoFocus in Tile 10: adopting Best-Z from the cache: -0.131189
17-03-18 02:21:07.925 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 67.3826 mm, moving Z to -0.13119 mm
17-03-18 02:21:07.925 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:07.925 -07 000000561 INF: Y Motor: Entering MoveAbsStepped (target = 107812 steps, sync = True, waitForSettling = True)
17-03-18 02:21:07.925 -07 000000561 INF: Y Motor: Moving to 67.3826 mm, started at 66.5391 mm, delta = 0.8435 mm
17-03-18 02:21:07.925 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:07.925 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28658, sync = True, waitForSettling = False)
17-03-18 02:21:07.925 -07 000000591 INF: Z Motor: Moving to -0.131188 mm, started at -0.130364 mm, distance = -0.82 um
17-03-18 02:21:07.925 -07 000000424 INF: FPGA: Recv YRDPOS 136272
17-03-18 02:21:07.935 -07 000000591 INF: FPGA: Xmit ZDACW 28658\n [Z Motor]
17-03-18 02:21:07.935 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:07.935 -07 000000561 INF: Y Motor: Encoder = 136272 = motor step 106462.5 = 66.5391 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:07.935 -07 000000561 INF: Y Motor: Last commanded position = 66.5526 mm (106484.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:07.935 -07 000000561 INF: Y Motor: Moving 1350 steps-29
17-03-18 02:21:07.935 -07 000000576 INF: FPGA: Recv ZDACW
17-03-18 02:21:07.945 -07 000000591 INF: FPGA: 'ZDACW 28658' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 02:21:07.945 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:07.945 -07 000000579 INF: FPGA: Recv ZDACR 28658
17-03-18 02:21:07.955 -07 000000561 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:07.955 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:07.955 -07 000000591 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 02:21:08.245 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 392 ms.
17-03-18 02:21:08.245 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 392 ms.
17-03-18 02:21:08.245 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:08.245 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 397 ms.
17-03-18 02:21:08.245 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 397 ms.
17-03-18 02:21:08.245 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:08.245 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:08.245 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:08.255 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 519 ms.
17-03-18 02:21:08.255 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 410 ms.
17-03-18 02:21:08.325 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 02:21:08.325 -07 000000561 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:21:08.375 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:08.375 -07 000000569 INF: FPGA: Recv YRDPOS 137977
17-03-18 02:21:08.385 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:21:08.385 -07 000000561 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:08.385 -07 000000561 INF: Y Motor: Position error before settling (table move) = -23 encoder counts (-0.011 mm)
17-03-18 02:21:08.385 -07 000000561 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.844 mm, average velocity = 2.125 mm/sec
17-03-18 02:21:09.335 -07 000000561 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:09.335 -07 000000467 INF: FPGA: Recv YRDPOS 137977
17-03-18 02:21:09.345 -07 000000561 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:09.345 -07 000000561 INF: Y Motor: Encoder = 137977 = motor step 107794.5 = 67.3716 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:09.365 -07 000000561 INF: Y Motor: After move to 67.382607, error = -0.011024, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:09.365 -07 000000561 INF: Y Motor: Position error after settling (table move) = -23 encoder counts (-0.011 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:09.365 -07 000000561 INF: Y Motor: Moved to 67.3716 after 1441 ms (table move)
17-03-18 02:21:09.375 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.131188 mm (DAC = 28658)
17-03-18 02:21:09.375 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.375 -07 000000590 INF: FPGA: Recv ZSGSRD 29713
17-03-18 02:21:09.385 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.385 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.385 -07 000000455 INF: FPGA: Recv ZSGSRD 29715
17-03-18 02:21:09.395 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.395 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.395 -07 000000576 INF: FPGA: Recv ZSGSRD 29719
17-03-18 02:21:09.405 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.405 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.405 -07 000000502 INF: FPGA: Recv ZSGSRD 29713
17-03-18 02:21:09.415 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.415 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.415 -07 000000618 INF: FPGA: Recv ZSGSRD 29718
17-03-18 02:21:09.425 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.425 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.425 -07 000000576 INF: FPGA: Recv ZSGSRD 29712
17-03-18 02:21:09.435 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.435 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.435 -07 000000569 INF: FPGA: Recv ZSGSRD 29708
17-03-18 02:21:09.445 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:09.445 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.445 -07 000000618 INF: FPGA: Recv ZSGSRD 29708
17-03-18 02:21:09.455 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.455 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.455 -07 000000455 INF: FPGA: Recv ZSGSRD 29707
17-03-18 02:21:09.465 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.465 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.465 -07 000000590 INF: FPGA: Recv ZSGSRD 29715
17-03-18 02:21:09.475 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.475 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:09.475 -07 000000501 INF: FPGA: Recv ZPIEZORD 25304
17-03-18 02:21:09.485 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.485 -07 000000610 INF: Z Motor: Piezo is near 34.1 V (nominally 0 to 100 V), expect near 43.7 V, since DAC is at 4.373 V. Piezo Error = -9.7 V.
17-03-18 02:21:09.485 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -131.2 um, Read 10 ADC samples: Avg = 29713 (-130.4 uncal um), Error = 0.8 uncal um, Median = 29713 (-130.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29707 (-130.4 uncal um), Max = 29719 (-130.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:09.485 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29713, posNoise = 6, negNoise = 6
17-03-18 02:21:09.485 -07 000000610 INF: Z Motor: After move to -0.131188, error = -0.000018, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:09.485 -07 000000610 INF: Z Motor: Settle wait time = 1443 ms, measure time = 111 ms (allowed 150 ms), total time = 1554 ms
17-03-18 02:21:09.485 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:09.525 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1596 ms
17-03-18 02:21:09.525 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:09.525 -07 000000610 INF: ------------ Scan Snapping tile 10 at Y-position 67.37158203125, Z-position -0.131205967379278. ----------
17-03-18 02:21:09.525 -07 000000610 INF: Cycle	98	Tile	10	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:09.525 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28482, sync = True, waitForSettling = True)
17-03-18 02:21:09.525 -07 000000610 INF: Z Motor: Moving to -0.130382 mm, started at -0.131206 mm, distance = 0.82 um
17-03-18 02:21:09.525 -07 000000610 INF: FPGA: Xmit ZDACW 28482\n [Z Motor]
17-03-18 02:21:09.525 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 02:21:09.535 -07 000000610 INF: FPGA: 'ZDACW 28482' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:21:09.535 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:09.535 -07 000000591 INF: FPGA: Recv ZDACR 28482
17-03-18 02:21:09.545 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.545 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:09.695 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.695 -07 000000569 INF: FPGA: Recv ZSGSRD 29589
17-03-18 02:21:09.705 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:09.705 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.705 -07 000000591 INF: FPGA: Recv ZSGSRD 29584
17-03-18 02:21:09.715 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.715 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.715 -07 000000579 INF: FPGA: Recv ZSGSRD 29586
17-03-18 02:21:09.725 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.725 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.725 -07 000000576 INF: FPGA: Recv ZSGSRD 29585
17-03-18 02:21:09.735 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.735 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.735 -07 000000424 INF: FPGA: Recv ZSGSRD 29590
17-03-18 02:21:09.745 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.745 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.745 -07 000000501 INF: FPGA: Recv ZSGSRD 29583
17-03-18 02:21:09.755 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.755 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.755 -07 000000455 INF: FPGA: Recv ZSGSRD 29579
17-03-18 02:21:09.765 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.765 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.765 -07 000000579 INF: FPGA: Recv ZSGSRD 29582
17-03-18 02:21:09.775 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.775 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.775 -07 000000561 INF: FPGA: Recv ZSGSRD 29584
17-03-18 02:21:09.785 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:21:09.785 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:09.785 -07 000000591 INF: FPGA: Recv ZSGSRD 29585
17-03-18 02:21:09.795 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.795 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:09.795 -07 000000579 INF: FPGA: Recv ZPIEZORD 25121
17-03-18 02:21:09.805 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:09.805 -07 000000610 INF: Z Motor: Piezo is near 33.7 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.346 V. Piezo Error = -9.8 V.
17-03-18 02:21:09.805 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.4 um, Read 10 ADC samples: Avg = 29585 (-129.6 uncal um), Error = 0.8 uncal um, Median = 29584 (-129.6 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29579 (-129.6 uncal um), Max = 29590 (-129.6 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:09.805 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29585, posNoise = 5, negNoise = 6
17-03-18 02:21:09.805 -07 000000610 INF: Z Motor: After move to -0.130382, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:09.805 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:21:09.805 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:09.805 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:09.805 -07 000000461 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:09.805 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:09.805 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:09.805 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:09.805 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:09.805 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:09.805 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:09.805 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:09.805 -07 000000455 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:09.805 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:09.815 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:09.815 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:09.815 -07 000000455 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:09.815 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:09.825 -07 000000455 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 8 ms.
17-03-18 02:21:09.825 -07 000000455 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 13 ms.
17-03-18 02:21:09.825 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 02:21:09.825 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 02:21:09.825 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28658 150\n [Camera]
17-03-18 02:21:10.025 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:10.155 -07 000000430 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.023489,
17-03-18 02:21:10.415 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:10.415 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:10.415 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:10.415 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:10.415 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 02:21:10.425 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:10.425 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:10.425 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:10.425 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:10.425 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 02:21:10.615 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28658 779
17-03-18 02:21:10.765 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:10.805 -07 000000569 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 02:21:10.805 -07 000000569 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:21:10.805 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:10.805 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 02:21:10.805 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 382 ms.
17-03-18 02:21:10.805 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:10.805 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:10.805 -07 000000569 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 02:21:10.805 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:10.815 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 02:21:10.955 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:10.955 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:10.955 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:10.955 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:10.955 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 02:21:10.955 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:10.955 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:10.955 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:10.955 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:10.955 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 02:21:11.145 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:11.145 -07 000000561 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:11.145 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28658 150' command took 2 ms to send, 1312 ms to get response, and 1317 ms overall
17-03-18 02:21:11.145 -07 000000610 INF: Skipping AutoFocus in Tile 11: adopting Best-Z from the cache: -0.130713
17-03-18 02:21:11.145 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 68.2126 mm, moving Z to -0.13071 mm
17-03-18 02:21:11.145 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:11.145 -07 000000512 INF: Y Motor: Entering MoveAbsStepped (target = 109140 steps, sync = True, waitForSettling = True)
17-03-18 02:21:11.145 -07 000000512 INF: Y Motor: Moving to 68.2126 mm, started at 67.3716 mm, delta = 0.8410 mm
17-03-18 02:21:11.145 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:11.145 -07 000000501 INF: Z Motor: Entering MoveAbsStepped (DAC = 28554, sync = True, waitForSettling = False)
17-03-18 02:21:11.145 -07 000000501 INF: Z Motor: Moving to -0.130712 mm, started at -0.130384 mm, distance = -0.33 um
17-03-18 02:21:11.155 -07 000000501 INF: FPGA: Xmit ZDACW 28554\n [Z Motor]
17-03-18 02:21:11.155 -07 000000424 INF: FPGA: Recv YRDPOS 137978
17-03-18 02:21:11.155 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 1 ms to get response, and 3 ms overall
17-03-18 02:21:11.155 -07 000000512 INF: Y Motor: Encoder = 137978 = motor step 107795.3 = 67.3721 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:11.155 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 02:21:11.155 -07 000000512 INF: Y Motor: Last commanded position = 67.3826 mm (107812.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:11.155 -07 000000512 INF: Y Motor: Moving 1345 steps-23
17-03-18 02:21:11.165 -07 000000501 INF: FPGA: 'ZDACW 28554' command took 0 ms to send, 0 ms to get response, and 11 ms overall
17-03-18 02:21:11.165 -07 000000512 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:11.175 -07 000000501 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:11.175 -07 000000591 INF: FPGA: Recv ZDACR 28554
17-03-18 02:21:11.185 -07 000000501 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:11.185 -07 000000501 INF: Z Motor: MoveAbsStepped took 31 ms (did NOT wait for settling yet))
17-03-18 02:21:11.335 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 382 ms.
17-03-18 02:21:11.335 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 02:21:11.335 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:11.335 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 386 ms.
17-03-18 02:21:11.335 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:21:11.335 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:11.345 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:11.345 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:11.345 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 02:21:11.345 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 02:21:11.475 -07 000000591 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:11.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:11.535 -07 000000455 INF: FPGA: Recv YMVTILE
17-03-18 02:21:11.535 -07 000000512 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 369 ms to get response, and 383 ms overall
17-03-18 02:21:11.585 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:11.585 -07 000000461 INF: FPGA: Recv YRDPOS 139684
17-03-18 02:21:11.595 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:11.595 -07 000000512 INF: Y Motor: Encoder = 139684 = motor step 109128.1 = 68.2051 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:11.595 -07 000000512 INF: Y Motor: Position error before settling (table move) = -15 encoder counts (-0.007 mm)
17-03-18 02:21:11.595 -07 000000512 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 383 ms, distance = 0.841 mm, average velocity = 2.196 mm/sec
17-03-18 02:21:12.545 -07 000000512 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:12.545 -07 000000430 INF: FPGA: Recv YRDPOS 139685
17-03-18 02:21:12.555 -07 000000512 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:12.555 -07 000000512 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:12.575 -07 000000512 INF: Y Motor: After move to 68.212608, error = -0.007042, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:12.575 -07 000000512 INF: Y Motor: Position error after settling (table move) = -14 encoder counts (-0.007 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:21:12.575 -07 000000512 INF: Y Motor: Moved to 68.2056 after 1428 ms (table move)
17-03-18 02:21:12.575 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130712 mm (DAC = 28554)
17-03-18 02:21:12.575 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.585 -07 000000461 INF: FPGA: Recv ZSGSRD 29637
17-03-18 02:21:12.585 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 2 ms to get response, and 2 ms overall
17-03-18 02:21:12.585 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.585 -07 000000629 INF: FPGA: Recv ZSGSRD 29635
17-03-18 02:21:12.595 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:12.595 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.595 -07 000000576 INF: FPGA: Recv ZSGSRD 29642
17-03-18 02:21:12.605 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.605 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.605 -07 000000444 INF: FPGA: Recv ZSGSRD 29642
17-03-18 02:21:12.615 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.615 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.615 -07 000000569 INF: FPGA: Recv ZSGSRD 29636
17-03-18 02:21:12.625 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.625 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.625 -07 000000502 INF: FPGA: Recv ZSGSRD 29638
17-03-18 02:21:12.635 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.635 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.635 -07 000000512 INF: FPGA: Recv ZSGSRD 29629
17-03-18 02:21:12.645 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.645 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.645 -07 000000455 INF: FPGA: Recv ZSGSRD 29637
17-03-18 02:21:12.655 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.655 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.655 -07 000000629 INF: FPGA: Recv ZSGSRD 29635
17-03-18 02:21:12.665 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.665 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.665 -07 000000591 INF: FPGA: Recv ZSGSRD 29639
17-03-18 02:21:12.675 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.675 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:12.675 -07 000000430 INF: FPGA: Recv ZPIEZORD 25177
17-03-18 02:21:12.685 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.685 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.6 V, since DAC is at 4.357 V. Piezo Error = -9.8 V.
17-03-18 02:21:12.685 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.7 um, Read 10 ADC samples: Avg = 29637 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29637 (-129.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29629 (-129.9 uncal um), Max = 29642 (-130.0 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:21:12.685 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29637, posNoise = 5, negNoise = 8
17-03-18 02:21:12.685 -07 000000610 INF: Z Motor: After move to -0.130712, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:12.685 -07 000000610 INF: Z Motor: Settle wait time = 1430 ms, measure time = 102 ms (allowed 150 ms), total time = 1532 ms
17-03-18 02:21:12.685 -07 000000610 INF: Z Motor: Waiting extra 48 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:12.735 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1583 ms
17-03-18 02:21:12.735 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:12.735 -07 000000610 INF: ------------ Scan Snapping tile 11 at Y-position 68.20556640625, Z-position -0.130717727256504. ----------
17-03-18 02:21:12.735 -07 000000610 INF: Cycle	98	Tile	11	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:12.735 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28377, sync = True, waitForSettling = True)
17-03-18 02:21:12.735 -07 000000610 INF: Z Motor: Moving to -0.129902 mm, started at -0.130718 mm, distance = 0.82 um
17-03-18 02:21:12.735 -07 000000610 INF: FPGA: Xmit ZDACW 28377\n [Z Motor]
17-03-18 02:21:12.735 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 02:21:12.745 -07 000000610 INF: FPGA: 'ZDACW 28377' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:12.745 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:12.745 -07 000000576 INF: FPGA: Recv ZDACR 28377
17-03-18 02:21:12.755 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:12.755 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:12.905 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.905 -07 000000430 INF: FPGA: Recv ZSGSRD 29512
17-03-18 02:21:12.915 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.915 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.915 -07 000000618 INF: FPGA: Recv ZSGSRD 29513
17-03-18 02:21:12.925 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.925 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.925 -07 000000629 INF: FPGA: Recv ZSGSRD 29512
17-03-18 02:21:12.935 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.935 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.935 -07 000000462 INF: FPGA: Recv ZSGSRD 29516
17-03-18 02:21:12.945 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.945 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.945 -07 000000424 INF: FPGA: Recv ZSGSRD 29508
17-03-18 02:21:12.955 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.955 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.955 -07 000000579 INF: FPGA: Recv ZSGSRD 29509
17-03-18 02:21:12.965 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.965 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.965 -07 000000512 INF: FPGA: Recv ZSGSRD 29515
17-03-18 02:21:12.975 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.975 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.975 -07 000000606 INF: FPGA: Recv ZSGSRD 29505
17-03-18 02:21:12.985 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.985 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.985 -07 000000462 INF: FPGA: Recv ZSGSRD 29512
17-03-18 02:21:12.995 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:12.995 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:12.995 -07 000000590 INF: FPGA: Recv ZSGSRD 29510
17-03-18 02:21:13.005 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:13.005 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:13.005 -07 000000626 INF: FPGA: Recv ZPIEZORD 25027
17-03-18 02:21:13.015 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:13.015 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.330 V. Piezo Error = -9.8 V.
17-03-18 02:21:13.015 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.9 um, Read 10 ADC samples: Avg = 29511 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29512 (-129.1 uncal um), StdDev = 3 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29505 (-129.1 uncal um), Max = 29516 (-129.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:13.015 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29511, posNoise = 5, negNoise = 6
17-03-18 02:21:13.015 -07 000000610 INF: Z Motor: After move to -0.129902, error = -0.000007, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:13.015 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:21:13.015 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:13.015 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:13.015 -07 000000606 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:13.015 -07 000000576 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:13.015 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:13.015 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:13.015 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:13.015 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:13.015 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:13.015 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:13.015 -07 000000512 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:13.015 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:13.025 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:13.025 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:13.025 -07 000000512 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:13.025 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:13.035 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:21:13.035 -07 000000591 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:21:13.035 -07 000000512 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:21:13.035 -07 000000512 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:21:13.045 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28554 150\n [Camera]
17-03-18 02:21:13.245 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 02:21:13.635 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:13.635 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:13.635 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:13.635 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:13.635 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:21:13.645 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:13.645 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:13.645 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:13.645 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:13.645 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:21:13.825 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28554 779
17-03-18 02:21:13.975 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:14.035 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 398 ms.
17-03-18 02:21:14.035 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 399 ms.
17-03-18 02:21:14.035 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:14.035 -07 000000569 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 396 ms.
17-03-18 02:21:14.035 -07 000000569 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 396 ms.
17-03-18 02:21:14.035 -07 000000569 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:14.035 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:14.035 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 402 ms.
17-03-18 02:21:14.045 -07 000000569 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:14.045 -07 000000569 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 407 ms.
17-03-18 02:21:14.165 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:14.165 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:14.165 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:14.175 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:14.175 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:14.175 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:14.175 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:14.175 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:21:14.175 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:14.175 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:21:14.355 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:21:14.355 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:14.355 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28554 150' command took 2 ms to send, 1309 ms to get response, and 1318 ms overall
17-03-18 02:21:14.365 -07 000000610 INF: Skipping AutoFocus in Tile 12: adopting Best-Z from the cache: -0.130630
17-03-18 02:21:14.365 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.0426 mm, moving Z to -0.13063 mm
17-03-18 02:21:14.365 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:14.365 -07 000000591 INF: Y Motor: Entering MoveAbsStepped (target = 110468 steps, sync = True, waitForSettling = True)
17-03-18 02:21:14.365 -07 000000591 INF: Y Motor: Moving to 69.0426 mm, started at 68.2056 mm, delta = 0.8370 mm
17-03-18 02:21:14.365 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:14.365 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 28536, sync = True, waitForSettling = False)
17-03-18 02:21:14.365 -07 000000606 INF: Z Motor: Moving to -0.130629 mm, started at -0.129908 mm, distance = -0.72 um
17-03-18 02:21:14.365 -07 000000576 INF: FPGA: Recv YRDPOS 139685
17-03-18 02:21:14.375 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:21:14.375 -07 000000591 INF: Y Motor: Encoder = 139685 = motor step 109128.9 = 68.2056 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:14.375 -07 000000591 INF: Y Motor: Last commanded position = 68.2126 mm (109140.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:14.375 -07 000000591 INF: Y Motor: Moving 1339 steps-15
17-03-18 02:21:14.375 -07 000000606 INF: FPGA: Xmit ZDACW 28536\n [Z Motor]
17-03-18 02:21:14.375 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 02:21:14.385 -07 000000606 INF: FPGA: 'ZDACW 28536' command took 3 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 02:21:14.385 -07 000000591 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:14.395 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:14.395 -07 000000444 INF: FPGA: Recv ZDACR 28536
17-03-18 02:21:14.405 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:14.405 -07 000000606 INF: Z Motor: MoveAbsStepped took 34 ms (did NOT wait for settling yet))
17-03-18 02:21:14.555 -07 000000467 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 377 ms.
17-03-18 02:21:14.555 -07 000000467 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 378 ms.
17-03-18 02:21:14.555 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:14.555 -07 000000561 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:21:14.555 -07 000000561 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:21:14.555 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:14.555 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:14.555 -07 000000467 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 02:21:14.555 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:14.565 -07 000000561 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 02:21:14.755 -07 000000569 INF: FPGA: Recv YMVTILE
17-03-18 02:21:14.755 -07 000000591 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 02:21:14.805 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:14.805 -07 000000512 INF: FPGA: Recv YRDPOS 141367
17-03-18 02:21:14.815 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:21:14.815 -07 000000591 INF: Y Motor: Encoder = 141367 = motor step 110443.0 = 69.0269 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:14.815 -07 000000591 INF: Y Motor: Position error before settling (table move) = -32 encoder counts (-0.016 mm)
17-03-18 02:21:14.815 -07 000000591 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 387 ms, distance = 0.837 mm, average velocity = 2.163 mm/sec
17-03-18 02:21:15.515 -07 000000455 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.037119,
17-03-18 02:21:15.765 -07 000000591 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:15.765 -07 000000626 INF: FPGA: Recv YRDPOS 141368
17-03-18 02:21:15.775 -07 000000591 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:15.775 -07 000000591 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:15.805 -07 000000591 INF: Y Motor: After move to 69.042610, error = -0.015266, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:15.805 -07 000000591 INF: Y Motor: Position error after settling (table move) = -31 encoder counts (-0.015 mm), Delta during settling = 1 counts (0.000 mm)
17-03-18 02:21:15.805 -07 000000591 INF: Y Motor: Moved to 69.0273 after 1436 ms (table move)
17-03-18 02:21:15.805 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.130629 mm (DAC = 28536)
17-03-18 02:21:15.805 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.805 -07 000000462 INF: FPGA: Recv ZSGSRD 29628
17-03-18 02:21:15.815 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:21:15.815 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.815 -07 000000606 INF: FPGA: Recv ZSGSRD 29623
17-03-18 02:21:15.825 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.825 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.825 -07 000000512 INF: FPGA: Recv ZSGSRD 29635
17-03-18 02:21:15.835 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.835 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.835 -07 000000606 INF: FPGA: Recv ZSGSRD 29625
17-03-18 02:21:15.845 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.845 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.845 -07 000000591 INF: FPGA: Recv ZSGSRD 29622
17-03-18 02:21:15.855 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.855 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.855 -07 000000579 INF: FPGA: Recv ZSGSRD 29622
17-03-18 02:21:15.865 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.865 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.865 -07 000000561 INF: FPGA: Recv ZSGSRD 29618
17-03-18 02:21:15.875 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.875 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.875 -07 000000618 INF: FPGA: Recv ZSGSRD 29626
17-03-18 02:21:15.885 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.885 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.885 -07 000000606 INF: FPGA: Recv ZSGSRD 29621
17-03-18 02:21:15.895 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.895 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:15.895 -07 000000424 INF: FPGA: Recv ZSGSRD 29626
17-03-18 02:21:15.905 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.905 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:15.905 -07 000000512 INF: FPGA: Recv ZPIEZORD 25199
17-03-18 02:21:15.915 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.915 -07 000000610 INF: Z Motor: Piezo is near 33.8 V (nominally 0 to 100 V), expect near 43.5 V, since DAC is at 4.354 V. Piezo Error = -9.7 V.
17-03-18 02:21:15.915 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -130.6 um, Read 10 ADC samples: Avg = 29625 (-129.9 uncal um), Error = 0.8 uncal um, Median = 29624 (-129.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29618 (-129.8 uncal um), Max = 29635 (-129.9 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:21:15.915 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29625, posNoise = 10, negNoise = 7
17-03-18 02:21:15.915 -07 000000610 INF: Z Motor: After move to -0.130629, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:15.915 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 107 ms (allowed 150 ms), total time = 1545 ms
17-03-18 02:21:15.915 -07 000000610 INF: Z Motor: Waiting extra 43 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:15.965 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1598 ms
17-03-18 02:21:15.965 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:15.965 -07 000000610 INF: ------------ Scan Snapping tile 12 at Y-position 69.02734375, Z-position -0.130640636710803. ----------
17-03-18 02:21:15.965 -07 000000610 INF: Cycle	98	Tile	12	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:15.965 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28359, sync = True, waitForSettling = True)
17-03-18 02:21:15.965 -07 000000610 INF: Z Motor: Moving to -0.129819 mm, started at -0.130641 mm, distance = 0.82 um
17-03-18 02:21:15.965 -07 000000610 INF: FPGA: Xmit ZDACW 28359\n [Z Motor]
17-03-18 02:21:15.965 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 02:21:15.975 -07 000000610 INF: FPGA: 'ZDACW 28359' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:15.975 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:15.975 -07 000000461 INF: FPGA: Recv ZDACR 28359
17-03-18 02:21:15.985 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:15.985 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:16.135 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.135 -07 000000618 INF: FPGA: Recv ZSGSRD 29509
17-03-18 02:21:16.145 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:16.145 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.145 -07 000000501 INF: FPGA: Recv ZSGSRD 29501
17-03-18 02:21:16.155 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.155 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.155 -07 000000455 INF: FPGA: Recv ZSGSRD 29495
17-03-18 02:21:16.165 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.165 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.165 -07 000000430 INF: FPGA: Recv ZSGSRD 29497
17-03-18 02:21:16.175 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.175 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.175 -07 000000629 INF: FPGA: Recv ZSGSRD 29498
17-03-18 02:21:16.185 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.185 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.185 -07 000000569 INF: FPGA: Recv ZSGSRD 29500
17-03-18 02:21:16.195 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.195 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.195 -07 000000444 INF: FPGA: Recv ZSGSRD 29499
17-03-18 02:21:16.205 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.205 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.205 -07 000000455 INF: FPGA: Recv ZSGSRD 29492
17-03-18 02:21:16.215 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.215 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.215 -07 000000606 INF: FPGA: Recv ZSGSRD 29500
17-03-18 02:21:16.225 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.225 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:16.225 -07 000000461 INF: FPGA: Recv ZSGSRD 29495
17-03-18 02:21:16.235 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.235 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:16.235 -07 000000576 INF: FPGA: Recv ZPIEZORD 25009
17-03-18 02:21:16.245 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:16.245 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.3 V, since DAC is at 4.327 V. Piezo Error = -9.8 V.
17-03-18 02:21:16.245 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.8 um, Read 10 ADC samples: Avg = 29499 (-129.1 uncal um), Error = 0.8 uncal um, Median = 29498 (-129.0 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29492 (-129.0 uncal um), Max = 29509 (-129.1 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:21:16.245 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29499, posNoise = 10, negNoise = 7
17-03-18 02:21:16.245 -07 000000610 INF: Z Motor: After move to -0.129819, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:16.245 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:21:16.245 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:16.245 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:16.245 -07 000000591 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:16.245 -07 000000424 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:16.245 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:16.245 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:16.245 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:16.245 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:16.245 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:16.245 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:16.245 -07 000000461 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:16.245 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:16.255 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:21:16.255 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:16.255 -07 000000461 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:16.255 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:16.265 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 02:21:16.265 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:21:16.265 -07 000000461 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 14 ms.
17-03-18 02:21:16.265 -07 000000461 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:21:16.265 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28536 150\n [Camera]
17-03-18 02:21:16.465 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:16.475 -07 000000430 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:16.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:16.865 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:16.865 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:16.865 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:16.865 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:16.865 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:16.865 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:16.865 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:16.865 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:21:16.875 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:16.875 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) start.
17-03-18 02:21:17.055 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28536 779
17-03-18 02:21:17.205 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:17.245 -07 000000512 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:21:17.245 -07 000000512 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 02:21:17.245 -07 000000512 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:17.245 -07 000000462 INF: Camera: sBCa_ReadImage(785074288, 2147487792, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 02:21:17.245 -07 000000462 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 02:21:17.245 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:17.245 -07 000000512 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:21:17.245 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:17.245 -07 000000462 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:21:17.255 -07 000000512 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 388 ms.
17-03-18 02:21:17.395 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:17.395 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:17.395 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:17.395 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:17.395 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) start.
17-03-18 02:21:17.395 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:17.395 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:17.395 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:17.395 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:17.395 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) start.
17-03-18 02:21:17.585 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:17.585 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:17.585 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28536 150' command took 2 ms to send, 1307 ms to get response, and 1317 ms overall
17-03-18 02:21:17.585 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 02:21:17.585 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 13 at Y-position 69.02734375, Z-Position -0.129831185980941. ------
17-03-18 02:21:17.595 -07 000000579 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:21:17.595 -07 000000512 INF: Y Motor: MoveYZ optimized starting. Moving Y to 69.8726 mm, moving Z to -0.13622 mm
17-03-18 02:21:17.595 -07 000000512 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:17.595 -07 000000461 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:21:17.595 -07 000000618 INF: Y Motor: Entering MoveAbsStepped (target = 111796 steps, sync = True, waitForSettling = True)
17-03-18 02:21:17.595 -07 000000618 INF: Y Motor: Moving to 69.8726 mm, started at 69.0273 mm, delta = 0.8453 mm
17-03-18 02:21:17.595 -07 000000606 INF: Z Motor: Entering MoveAbsStepped (DAC = 29758, sync = True, waitForSettling = False)
17-03-18 02:21:17.595 -07 000000606 INF: Z Motor: Moving to -0.136223 mm, started at -0.129831 mm, distance = -6.39 um
17-03-18 02:21:17.605 -07 000000579 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:17.605 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:17.605 -07 000000626 INF: FPGA: Recv YRDPOS 141368
17-03-18 02:21:17.615 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:17.615 -07 000000618 INF: Y Motor: Encoder = 141368 = motor step 110443.8 = 69.0273 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:17.615 -07 000000618 INF: Y Motor: Last commanded position = 69.0426 mm (110468.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:17.615 -07 000000618 INF: Y Motor: Moving 1352 steps-32
17-03-18 02:21:17.615 -07 000000579 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:21:17.625 -07 000000606 INF: FPGA: Xmit ZDACW 29758\n [Z Motor]
17-03-18 02:21:17.625 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 02:21:17.635 -07 000000618 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:17.635 -07 000000606 INF: FPGA: 'ZDACW 29758' command took 0 ms to send, 0 ms to get response, and 30 ms overall
17-03-18 02:21:17.645 -07 000000606 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:17.645 -07 000000501 INF: FPGA: Recv ZDACR 29758
17-03-18 02:21:17.655 -07 000000606 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:17.655 -07 000000606 INF: Z Motor: MoveAbsStepped took 50 ms (did NOT wait for settling yet))
17-03-18 02:21:17.775 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1389170736, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 02:21:17.775 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:21:17.775 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:17.785 -07 000000467 INF: Camera: sBCa_ReadImage(785074704, 1424593000, 0x0, 418435064) end. Duration was 381 ms.
17-03-18 02:21:17.785 -07 000000467 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 381 ms.
17-03-18 02:21:17.785 -07 000000467 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:17.785 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:21:17.785 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 02:21:17.785 -07 000000467 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:17.795 -07 000000467 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 02:21:17.815 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:21:17.815 -07 000000579 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 213 ms overall
17-03-18 02:21:18.005 -07 000000606 INF: FPGA: Recv YMVTILE
17-03-18 02:21:18.005 -07 000000618 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:21:18.085 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:18.085 -07 000000502 INF: FPGA: Recv YRDPOS 143080
17-03-18 02:21:18.095 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:21:18.095 -07 000000618 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:18.095 -07 000000618 INF: Y Motor: Position error before settling (table move) = -19 encoder counts (-0.009 mm)
17-03-18 02:21:18.095 -07 000000618 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.845 mm, average velocity = 2.124 mm/sec
17-03-18 02:21:19.045 -07 000000618 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:19.045 -07 000000444 INF: FPGA: Recv YRDPOS 143080
17-03-18 02:21:19.055 -07 000000618 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:19.055 -07 000000618 INF: Y Motor: Encoder = 143080 = motor step 111781.3 = 69.8633 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:19.075 -07 000000618 INF: Y Motor: After move to 69.872612, error = -0.009331, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:19.075 -07 000000618 INF: Y Motor: Position error after settling (table move) = -19 encoder counts (-0.009 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:19.075 -07 000000618 INF: Y Motor: Moved to 69.8633 after 1478 ms (table move)
17-03-18 02:21:19.085 -07 000000512 INF: Z Motor: EndOfMoveAbsStepped: target = -0.136223 mm (DAC = 29758)
17-03-18 02:21:19.085 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.085 -07 000000590 INF: FPGA: Recv ZSGSRD 30499
17-03-18 02:21:19.095 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:21:19.095 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.095 -07 000000444 INF: FPGA: Recv ZSGSRD 30496
17-03-18 02:21:19.105 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.105 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.105 -07 000000430 INF: FPGA: Recv ZSGSRD 30490
17-03-18 02:21:19.115 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.115 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.115 -07 000000626 INF: FPGA: Recv ZSGSRD 30489
17-03-18 02:21:19.125 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.125 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.125 -07 000000618 INF: FPGA: Recv ZSGSRD 30493
17-03-18 02:21:19.135 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.135 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.135 -07 000000569 INF: FPGA: Recv ZSGSRD 30494
17-03-18 02:21:19.145 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.145 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.145 -07 000000444 INF: FPGA: Recv ZSGSRD 30497
17-03-18 02:21:19.155 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.155 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.155 -07 000000430 INF: FPGA: Recv ZSGSRD 30501
17-03-18 02:21:19.165 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.165 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.165 -07 000000591 INF: FPGA: Recv ZSGSRD 30500
17-03-18 02:21:19.175 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.175 -07 000000512 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:19.175 -07 000000561 INF: FPGA: Recv ZSGSRD 30493
17-03-18 02:21:19.185 -07 000000512 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.185 -07 000000512 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:19.185 -07 000000569 INF: FPGA: Recv ZPIEZORD 26316
17-03-18 02:21:19.195 -07 000000512 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.195 -07 000000512 INF: Z Motor: Piezo is near 36.2 V (nominally 0 to 100 V), expect near 45.4 V, since DAC is at 4.541 V. Piezo Error = -9.2 V.
17-03-18 02:21:19.195 -07 000000512 INF: Z Motor: ReadAdcAverage: Commanded Z = -136.2 um, Read 10 ADC samples: Avg = 30495 (-135.4 uncal um), Error = 0.8 uncal um, Median = 30495 (-135.4 uncal um), StdDev = 4 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 30489 (-135.4 uncal um), Max = 30501 (-135.5 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:19.195 -07 000000512 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30495, posNoise = 6, negNoise = 6
17-03-18 02:21:19.195 -07 000000512 INF: Z Motor: After move to -0.136223, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:19.195 -07 000000512 INF: Z Motor: Settle wait time = 1481 ms, measure time = 111 ms (allowed 150 ms), total time = 1592 ms
17-03-18 02:21:19.195 -07 000000512 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:19.235 -07 000000512 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1636 ms
17-03-18 02:21:19.235 -07 000000512 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:19.235 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:19.235 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:19.235 -07 000000576 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:19.235 -07 000000444 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:19.235 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:21:19.235 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:19.235 -07 000000590 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:19.235 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:21:19.245 -07 000000590 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:19.245 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:21:19.255 -07 000000590 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 11 ms.
17-03-18 02:21:19.255 -07 000000590 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 02:21:19.255 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:21:19.305 -07 000000569 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:21:19.605 -07 000000462 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:21:19.605 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:21:19.605 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:21:19.605 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) start.
17-03-18 02:21:19.645 -07 000000590 INF: FPGA: Recv @CAMSNAP 381
17-03-18 02:21:19.645 -07 000000467 INF: FPGA: Recv CAMSNAP
17-03-18 02:21:19.645 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 382 ms to get response, and 386 ms overall
17-03-18 02:21:19.735 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 1113297000, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 02:21:19.735 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:19.735 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:21:19.735 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 129 ms.
17-03-18 02:21:19.745 -07 000000561 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:21:19.745 -07 000000618 INF: Autofocus start
17-03-18 02:21:19.745 -07 000000618 INF: MeasureProfile start
17-03-18 02:21:19.745 -07 000000569 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:21:19.755 -07 000000561 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:19.755 -07 000000561 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:21:19.755 -07 000000618 INF: MeasureProfile done
17-03-18 02:21:19.755 -07 000000618 INF: X=-32  Z correction [um]=-0.1591732
17-03-18 02:21:19.755 -07 000000618 INF: Autofocus finished
17-03-18 02:21:19.955 -07 000000579 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:21:19.955 -07 000000561 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 195 ms to get response, and 202 ms overall
17-03-18 02:21:19.955 -07 000000610 INF: ------------ Scan Snapping tile 13 at Y-position 69.86328125, Z-position -0.136229701274135. ----------
17-03-18 02:21:19.965 -07 000000610 INF: Cycle	98	Tile	13	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:19.965 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28236, sync = True, waitForSettling = True)
17-03-18 02:21:19.965 -07 000000610 INF: Z Motor: Moving to -0.129256 mm, started at -0.136230 mm, distance = 6.97 um
17-03-18 02:21:19.965 -07 000000610 INF: FPGA: Xmit ZDACW 28236\n [Z Motor]
17-03-18 02:21:19.965 -07 000000626 INF: FPGA: Recv ZDACW
17-03-18 02:21:19.975 -07 000000610 INF: FPGA: 'ZDACW 28236' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:19.975 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:19.975 -07 000000569 INF: FPGA: Recv ZDACR 28236
17-03-18 02:21:19.985 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:19.985 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:20.135 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.135 -07 000000590 INF: FPGA: Recv ZSGSRD 29409
17-03-18 02:21:20.145 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.145 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.145 -07 000000626 INF: FPGA: Recv ZSGSRD 29414
17-03-18 02:21:20.155 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.155 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.155 -07 000000591 INF: FPGA: Recv ZSGSRD 29410
17-03-18 02:21:20.165 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.165 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.165 -07 000000618 INF: FPGA: Recv ZSGSRD 29415
17-03-18 02:21:20.175 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.175 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.175 -07 000000629 INF: FPGA: Recv ZSGSRD 29406
17-03-18 02:21:20.185 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.185 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.185 -07 000000576 INF: FPGA: Recv ZSGSRD 29407
17-03-18 02:21:20.195 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.195 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.195 -07 000000626 INF: FPGA: Recv ZSGSRD 29415
17-03-18 02:21:20.205 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.205 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.205 -07 000000569 INF: FPGA: Recv ZSGSRD 29413
17-03-18 02:21:20.215 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.215 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.215 -07 000000424 INF: FPGA: Recv ZSGSRD 29414
17-03-18 02:21:20.225 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.225 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:20.225 -07 000000501 INF: FPGA: Recv ZSGSRD 29409
17-03-18 02:21:20.235 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.235 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:20.235 -07 000000461 INF: FPGA: Recv ZPIEZORD 24920
17-03-18 02:21:20.245 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:20.245 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.309 V. Piezo Error = -9.8 V.
17-03-18 02:21:20.245 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.3 um, Read 10 ADC samples: Avg = 29411 (-128.5 uncal um), Error = 0.8 uncal um, Median = 29412 (-128.5 uncal um), StdDev = 3 (0.0 uncal um), Range = 9 (0.1 uncal um), Min = 29406 (-128.5 uncal um), Max = 29415 (-128.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:21:20.245 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29411, posNoise = 4, negNoise = 5
17-03-18 02:21:20.245 -07 000000610 INF: Z Motor: After move to -0.129256, error = -0.000010, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:20.245 -07 000000610 INF: Z Motor: MoveAbsStepped took 278 ms)
17-03-18 02:21:20.245 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:20.245 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:20.245 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:20.245 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:20.245 -07 000000606 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:20.245 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:20.245 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:20.245 -07 000000569 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:20.245 -07 000000467 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:20.245 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:20.245 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 02:21:20.245 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:20.245 -07 000000467 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:20.245 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:20.255 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:20.255 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:20.265 -07 000000467 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 16 ms.
17-03-18 02:21:20.265 -07 000000467 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:21:20.265 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 16 ms.
17-03-18 02:21:20.265 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 21 ms.
17-03-18 02:21:20.265 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28412 150\n [Camera]
17-03-18 02:21:20.465 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:20.865 -07 000000430 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:20.865 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:20.865 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:20.865 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:20.865 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) start.
17-03-18 02:21:20.865 -07 000000626 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:20.865 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:20.865 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:20.995 -07 000000462 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.003063,
17-03-18 02:21:20.995 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:20.995 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 02:21:21.055 -07 000000576 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28412 779
17-03-18 02:21:21.205 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:21.245 -07 000000461 INF: Camera: sBCa_ReadImage(785074288, 1460015264, 0x0, 391868352) end. Duration was 383 ms.
17-03-18 02:21:21.245 -07 000000461 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 384 ms.
17-03-18 02:21:21.245 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:21.255 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:21.255 -07 000000461 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:21:21.375 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 02:21:21.375 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 371 ms.
17-03-18 02:21:21.375 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:21.375 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:21.375 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 513 ms.
17-03-18 02:21:21.395 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:21.395 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:21.395 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:21.395 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:21.395 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:21.395 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:21.405 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:21.405 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:21:21.405 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:21.405 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:21:21.475 -07 000000461 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:21.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:21.585 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:21:21.585 -07 000000512 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:21.585 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28412 150' command took 2 ms to send, 1306 ms to get response, and 1317 ms overall
17-03-18 02:21:21.585 -07 000000610 INF: Skipping AutoFocus in Tile 14: adopting Best-Z from the cache: -0.129692
17-03-18 02:21:21.585 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 70.7026 mm, moving Z to -0.12969 mm
17-03-18 02:21:21.585 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:21.595 -07 000000461 INF: Y Motor: Entering MoveAbsStepped (target = 113124 steps, sync = True, waitForSettling = True)
17-03-18 02:21:21.595 -07 000000461 INF: Y Motor: Moving to 70.7026 mm, started at 69.8633 mm, delta = 0.8393 mm
17-03-18 02:21:21.595 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:21.595 -07 000000430 INF: Z Motor: Entering MoveAbsStepped (DAC = 28331, sync = True, waitForSettling = False)
17-03-18 02:21:21.595 -07 000000430 INF: Z Motor: Moving to -0.129691 mm, started at -0.129266 mm, distance = -0.43 um
17-03-18 02:21:21.595 -07 000000467 INF: FPGA: Recv YRDPOS 143081
17-03-18 02:21:21.605 -07 000000461 INF: FPGA: 'YRDPOS' command took 2 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:21:21.605 -07 000000461 INF: Y Motor: Encoder = 143081 = motor step 111782.0 = 69.8638 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:21.605 -07 000000430 INF: FPGA: Xmit ZDACW 28331\n [Z Motor]
17-03-18 02:21:21.605 -07 000000462 INF: FPGA: Recv ZDACW
17-03-18 02:21:21.605 -07 000000461 INF: Y Motor: Last commanded position = 69.8726 mm (111796.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:21.605 -07 000000461 INF: Y Motor: Moving 1342 steps-19
17-03-18 02:21:21.615 -07 000000430 INF: FPGA: 'ZDACW 28331' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:21:21.615 -07 000000461 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:21.625 -07 000000430 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:21.625 -07 000000424 INF: FPGA: Recv ZDACR 28331
17-03-18 02:21:21.635 -07 000000430 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:21.635 -07 000000430 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 02:21:21.785 -07 000000576 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:21:21.785 -07 000000576 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 02:21:21.785 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:21.785 -07 000000455 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 02:21:21.785 -07 000000455 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 379 ms.
17-03-18 02:21:21.785 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:21.785 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:21:21.785 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:21:21.785 -07 000000455 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 02:21:21.795 -07 000000576 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 02:21:21.985 -07 000000467 INF: FPGA: Recv YMVTILE
17-03-18 02:21:21.985 -07 000000461 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 384 ms overall
17-03-18 02:21:22.035 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:22.035 -07 000000430 INF: FPGA: Recv YRDPOS 144770
17-03-18 02:21:22.045 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:22.045 -07 000000461 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:22.045 -07 000000461 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 02:21:22.045 -07 000000461 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 384 ms, distance = 0.839 mm, average velocity = 2.186 mm/sec
17-03-18 02:21:22.995 -07 000000461 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:22.995 -07 000000502 INF: FPGA: Recv YRDPOS 144770
17-03-18 02:21:23.005 -07 000000461 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.005 -07 000000461 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:23.025 -07 000000461 INF: Y Motor: After move to 70.702606, error = -0.014130, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:23.025 -07 000000461 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:23.025 -07 000000461 INF: Y Motor: Moved to 70.6885 after 1436 ms (table move)
17-03-18 02:21:23.035 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129691 mm (DAC = 28331)
17-03-18 02:21:23.035 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.035 -07 000000629 INF: FPGA: Recv ZSGSRD 29480
17-03-18 02:21:23.045 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.045 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.045 -07 000000569 INF: FPGA: Recv ZSGSRD 29481
17-03-18 02:21:23.055 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.055 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.055 -07 000000591 INF: FPGA: Recv ZSGSRD 29476
17-03-18 02:21:23.065 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.065 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.065 -07 000000444 INF: FPGA: Recv ZSGSRD 29485
17-03-18 02:21:23.075 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.075 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.075 -07 000000462 INF: FPGA: Recv ZSGSRD 29476
17-03-18 02:21:23.085 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.085 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.085 -07 000000424 INF: FPGA: Recv ZSGSRD 29473
17-03-18 02:21:23.095 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.095 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.095 -07 000000569 INF: FPGA: Recv ZSGSRD 29480
17-03-18 02:21:23.105 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.105 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.105 -07 000000512 INF: FPGA: Recv ZSGSRD 29472
17-03-18 02:21:23.115 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.115 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.115 -07 000000467 INF: FPGA: Recv ZSGSRD 29483
17-03-18 02:21:23.125 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.125 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.125 -07 000000461 INF: FPGA: Recv ZSGSRD 29476
17-03-18 02:21:23.135 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.135 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:23.135 -07 000000579 INF: FPGA: Recv ZPIEZORD 25060
17-03-18 02:21:23.145 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.145 -07 000000610 INF: Z Motor: Piezo is near 33.5 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.323 V. Piezo Error = -9.7 V.
17-03-18 02:21:23.145 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29478 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29478 (-128.9 uncal um), StdDev = 4 (0.0 uncal um), Range = 13 (0.1 uncal um), Min = 29472 (-128.9 uncal um), Max = 29485 (-129.0 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:23.145 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29478, posNoise = 7, negNoise = 6
17-03-18 02:21:23.145 -07 000000610 INF: Z Motor: After move to -0.129691, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:23.145 -07 000000610 INF: Z Motor: Settle wait time = 1436 ms, measure time = 111 ms (allowed 150 ms), total time = 1547 ms
17-03-18 02:21:23.145 -07 000000610 INF: Z Motor: Waiting extra 39 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:23.185 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1591 ms
17-03-18 02:21:23.185 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:23.185 -07 000000610 INF: ------------ Scan Snapping tile 14 at Y-position 70.6884765625, Z-position -0.129696277525964. ----------
17-03-18 02:21:23.185 -07 000000610 INF: Cycle	98	Tile	14	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:23.185 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28154, sync = True, waitForSettling = True)
17-03-18 02:21:23.185 -07 000000610 INF: Z Motor: Moving to -0.128881 mm, started at -0.129696 mm, distance = 0.82 um
17-03-18 02:21:23.185 -07 000000610 INF: FPGA: Xmit ZDACW 28154\n [Z Motor]
17-03-18 02:21:23.185 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 02:21:23.195 -07 000000610 INF: FPGA: 'ZDACW 28154' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 02:21:23.195 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:23.195 -07 000000512 INF: FPGA: Recv ZDACR 28154
17-03-18 02:21:23.205 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.205 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:23.355 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.355 -07 000000629 INF: FPGA: Recv ZSGSRD 29353
17-03-18 02:21:23.365 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:23.365 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.365 -07 000000461 INF: FPGA: Recv ZSGSRD 29351
17-03-18 02:21:23.375 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.375 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.375 -07 000000424 INF: FPGA: Recv ZSGSRD 29352
17-03-18 02:21:23.385 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.385 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.385 -07 000000569 INF: FPGA: Recv ZSGSRD 29352
17-03-18 02:21:23.395 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.395 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.395 -07 000000626 INF: FPGA: Recv ZSGSRD 29361
17-03-18 02:21:23.405 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:23.405 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.405 -07 000000590 INF: FPGA: Recv ZSGSRD 29351
17-03-18 02:21:23.415 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.415 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.415 -07 000000461 INF: FPGA: Recv ZSGSRD 29347
17-03-18 02:21:23.425 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.425 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.425 -07 000000579 INF: FPGA: Recv ZSGSRD 29352
17-03-18 02:21:23.435 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.435 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.435 -07 000000430 INF: FPGA: Recv ZSGSRD 29347
17-03-18 02:21:23.445 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.445 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:23.445 -07 000000591 INF: FPGA: Recv ZSGSRD 29355
17-03-18 02:21:23.455 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.455 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:23.455 -07 000000444 INF: FPGA: Recv ZPIEZORD 24892
17-03-18 02:21:23.465 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:23.465 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.296 V. Piezo Error = -9.8 V.
17-03-18 02:21:23.465 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29352 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29352 (-128.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 14 (0.1 uncal um), Min = 29347 (-128.1 uncal um), Max = 29361 (-128.2 uncal um), Pos Noise = 9 (0.1 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:21:23.465 -07 000000610 INF: Z Motor: ADC noise = 9, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29352, posNoise = 9, negNoise = 5
17-03-18 02:21:23.465 -07 000000610 INF: Z Motor: After move to -0.128881, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:23.465 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:21:23.465 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:23.465 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:23.465 -07 000000455 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:23.465 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:23.465 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:23.465 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:23.465 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:23.465 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:23.465 -07 000000591 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:23.465 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:23.465 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:23.465 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:23.475 -07 000000591 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:23.475 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:23.475 -07 000000462 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 4 ms.
17-03-18 02:21:23.475 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:23.485 -07 000000462 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 12 ms.
17-03-18 02:21:23.485 -07 000000462 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 18 ms.
17-03-18 02:21:23.485 -07 000000591 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:21:23.485 -07 000000591 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:21:23.485 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28331 150\n [Camera]
17-03-18 02:21:23.685 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:24.085 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:24.085 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:24.085 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:24.085 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:24.085 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:24.085 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:24.205 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:24.205 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start.
17-03-18 02:21:24.205 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:24.205 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 02:21:24.275 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28331 779
17-03-18 02:21:24.425 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:24.575 -07 000000626 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 372 ms.
17-03-18 02:21:24.575 -07 000000626 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 372 ms.
17-03-18 02:21:24.575 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:24.575 -07 000000444 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 371 ms.
17-03-18 02:21:24.575 -07 000000444 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 372 ms.
17-03-18 02:21:24.575 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:24.575 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:24.575 -07 000000626 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 494 ms.
17-03-18 02:21:24.585 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:24.585 -07 000000444 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 502 ms.
17-03-18 02:21:24.615 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:24.615 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:24.615 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:24.615 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:24.615 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:24.615 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:24.615 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:24.615 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:21:24.625 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:24.625 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:21:24.805 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:24.805 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:24.805 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28331 150' command took 2 ms to send, 1305 ms to get response, and 1317 ms overall
17-03-18 02:21:24.805 -07 000000610 INF: Skipping AutoFocus in Tile 15: adopting Best-Z from the cache: -0.129669
17-03-18 02:21:24.805 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 71.5326 mm, moving Z to -0.12967 mm
17-03-18 02:21:24.805 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:24.805 -07 000000444 INF: Y Motor: Entering MoveAbsStepped (target = 114452 steps, sync = True, waitForSettling = True)
17-03-18 02:21:24.805 -07 000000444 INF: Y Motor: Moving to 71.5326 mm, started at 70.6885 mm, delta = 0.8441 mm
17-03-18 02:21:24.805 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:24.815 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 28326, sync = True, waitForSettling = False)
17-03-18 02:21:24.815 -07 000000512 INF: Z Motor: Moving to -0.129668 mm, started at -0.128887 mm, distance = -0.78 um
17-03-18 02:21:24.815 -07 000000591 INF: FPGA: Recv YRDPOS 144770
17-03-18 02:21:24.825 -07 000000512 INF: FPGA: Xmit ZDACW 28326\n [Z Motor]
17-03-18 02:21:24.825 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:24.825 -07 000000444 INF: Y Motor: Encoder = 144770 = motor step 113101.6 = 70.6885 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:24.825 -07 000000444 INF: Y Motor: Last commanded position = 70.7026 mm (113124.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:24.825 -07 000000444 INF: Y Motor: Moving 1351 steps-29
17-03-18 02:21:24.825 -07 000000606 INF: FPGA: Recv ZDACW
17-03-18 02:21:24.835 -07 000000444 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:24.835 -07 000000512 INF: FPGA: 'ZDACW 28326' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:24.845 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:24.845 -07 000000561 INF: FPGA: Recv ZDACR 28326
17-03-18 02:21:24.855 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:24.855 -07 000000512 INF: Z Motor: MoveAbsStepped took 39 ms (did NOT wait for settling yet))
17-03-18 02:21:24.995 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 02:21:24.995 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:21:24.995 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:24.995 -07 000000461 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:21:24.995 -07 000000461 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 377 ms.
17-03-18 02:21:24.995 -07 000000461 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:25.005 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:25.005 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 02:21:25.005 -07 000000461 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:25.015 -07 000000461 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 02:21:25.205 -07 000000579 INF: FPGA: Recv YMVTILE
17-03-18 02:21:25.205 -07 000000444 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 02:21:25.255 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:25.255 -07 000000461 INF: FPGA: Recv YRDPOS 146471
17-03-18 02:21:25.265 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:25.265 -07 000000444 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:25.265 -07 000000444 INF: Y Motor: Position error before settling (table move) = -28 encoder counts (-0.014 mm)
17-03-18 02:21:25.265 -07 000000444 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.844 mm, average velocity = 2.193 mm/sec
17-03-18 02:21:26.215 -07 000000444 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:26.215 -07 000000606 INF: FPGA: Recv YRDPOS 146471
17-03-18 02:21:26.225 -07 000000444 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.225 -07 000000444 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:26.245 -07 000000444 INF: Y Motor: After move to 71.532608, error = -0.013565, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:26.245 -07 000000444 INF: Y Motor: Position error after settling (table move) = -28 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:26.245 -07 000000444 INF: Y Motor: Moved to 71.5190 after 1438 ms (table move)
17-03-18 02:21:26.255 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129668 mm (DAC = 28326)
17-03-18 02:21:26.255 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.255 -07 000000561 INF: FPGA: Recv ZSGSRD 29478
17-03-18 02:21:26.265 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.265 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.265 -07 000000626 INF: FPGA: Recv ZSGSRD 29476
17-03-18 02:21:26.275 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.275 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.275 -07 000000569 INF: FPGA: Recv ZSGSRD 29473
17-03-18 02:21:26.285 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.285 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.285 -07 000000629 INF: FPGA: Recv ZSGSRD 29473
17-03-18 02:21:26.295 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.295 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.295 -07 000000501 INF: FPGA: Recv ZSGSRD 29473
17-03-18 02:21:26.305 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.305 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.305 -07 000000467 INF: FPGA: Recv ZSGSRD 29485
17-03-18 02:21:26.315 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.315 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.315 -07 000000424 INF: FPGA: Recv ZSGSRD 29468
17-03-18 02:21:26.325 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.325 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.325 -07 000000590 INF: FPGA: Recv ZSGSRD 29468
17-03-18 02:21:26.335 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.335 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.335 -07 000000576 INF: FPGA: Recv ZSGSRD 29477
17-03-18 02:21:26.345 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.355 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.355 -07 000000512 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.024884,
17-03-18 02:21:26.355 -07 000000569 INF: FPGA: Recv ZSGSRD 29477
17-03-18 02:21:26.365 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:26.385 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:26.385 -07 000000569 INF: FPGA: Recv ZPIEZORD 25079
17-03-18 02:21:26.395 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:21:26.395 -07 000000610 INF: Z Motor: Piezo is near 33.6 V (nominally 0 to 100 V), expect near 43.2 V, since DAC is at 4.322 V. Piezo Error = -9.6 V.
17-03-18 02:21:26.395 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.7 um, Read 10 ADC samples: Avg = 29475 (-128.9 uncal um), Error = 0.8 uncal um, Median = 29474 (-128.9 uncal um), StdDev = 5 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29468 (-128.9 uncal um), Max = 29485 (-129.0 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 7 (0.0 uncal um)
17-03-18 02:21:26.395 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29475, posNoise = 10, negNoise = 7
17-03-18 02:21:26.395 -07 000000610 INF: Z Motor: After move to -0.129668, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:26.395 -07 000000610 INF: Z Motor: Settle wait time = 1439 ms, measure time = 141 ms (allowed 150 ms), total time = 1580 ms
17-03-18 02:21:26.395 -07 000000610 INF: Z Motor: Waiting extra 9 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:26.405 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 02:21:26.405 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:26.405 -07 000000610 INF: ------------ Scan Snapping tile 15 at Y-position 71.51904296875, Z-position -0.129677004889539. ----------
17-03-18 02:21:26.405 -07 000000610 INF: Cycle	98	Tile	15	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:26.405 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28149, sync = True, waitForSettling = True)
17-03-18 02:21:26.405 -07 000000610 INF: Z Motor: Moving to -0.128858 mm, started at -0.129677 mm, distance = 0.82 um
17-03-18 02:21:26.415 -07 000000610 INF: FPGA: Xmit ZDACW 28149\n [Z Motor]
17-03-18 02:21:26.415 -07 000000569 INF: FPGA: Recv ZDACW
17-03-18 02:21:26.425 -07 000000610 INF: FPGA: 'ZDACW 28149' command took 0 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 02:21:26.425 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:26.425 -07 000000444 INF: FPGA: Recv ZDACR 28149
17-03-18 02:21:26.435 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.435 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:26.475 -07 000000502 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:26.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:26.585 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.585 -07 000000629 INF: FPGA: Recv ZSGSRD 29350
17-03-18 02:21:26.595 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:26.595 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.595 -07 000000467 INF: FPGA: Recv ZSGSRD 29352
17-03-18 02:21:26.605 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.605 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.605 -07 000000462 INF: FPGA: Recv ZSGSRD 29351
17-03-18 02:21:26.615 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.615 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.615 -07 000000576 INF: FPGA: Recv ZSGSRD 29346
17-03-18 02:21:26.625 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.625 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.625 -07 000000579 INF: FPGA: Recv ZSGSRD 29351
17-03-18 02:21:26.635 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.635 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.635 -07 000000569 INF: FPGA: Recv ZSGSRD 29348
17-03-18 02:21:26.645 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.645 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.645 -07 000000606 INF: FPGA: Recv ZSGSRD 29342
17-03-18 02:21:26.655 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.655 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.655 -07 000000512 INF: FPGA: Recv ZSGSRD 29348
17-03-18 02:21:26.665 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.665 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.665 -07 000000590 INF: FPGA: Recv ZSGSRD 29351
17-03-18 02:21:26.675 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.675 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:26.675 -07 000000502 INF: FPGA: Recv ZSGSRD 29357
17-03-18 02:21:26.685 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.685 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:26.685 -07 000000461 INF: FPGA: Recv ZPIEZORD 24902
17-03-18 02:21:26.695 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:26.695 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 43.0 V, since DAC is at 4.295 V. Piezo Error = -9.8 V.
17-03-18 02:21:26.695 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.9 um, Read 10 ADC samples: Avg = 29350 (-128.1 uncal um), Error = 0.8 uncal um, Median = 29350 (-128.1 uncal um), StdDev = 4 (0.0 uncal um), Range = 15 (0.1 uncal um), Min = 29342 (-128.0 uncal um), Max = 29357 (-128.1 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 8 (0.1 uncal um)
17-03-18 02:21:26.695 -07 000000610 INF: Z Motor: ADC noise = 8, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29350, posNoise = 7, negNoise = 8
17-03-18 02:21:26.695 -07 000000610 INF: Z Motor: After move to -0.128858, error = -0.000016, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:26.695 -07 000000610 INF: Z Motor: MoveAbsStepped took 284 ms)
17-03-18 02:21:26.695 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:26.695 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:26.695 -07 000000462 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:26.695 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:26.695 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:26.695 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:26.695 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:26.695 -07 000000430 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:26.695 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:26.695 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:26.695 -07 000000561 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:26.695 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:26.705 -07 000000561 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:21:26.705 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:26.705 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:26.705 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:26.715 -07 000000561 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 14 ms.
17-03-18 02:21:26.715 -07 000000561 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:21:26.715 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 15 ms.
17-03-18 02:21:26.715 -07 000000502 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:21:26.715 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28326 150\n [Camera]
17-03-18 02:21:26.915 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:27.315 -07 000000629 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:27.315 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:27.315 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:27.315 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:27.315 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 02:21:27.315 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:27.315 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:27.315 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:27.315 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:27.315 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 02:21:27.505 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28326 779
17-03-18 02:21:27.655 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:27.705 -07 000000629 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 02:21:27.705 -07 000000629 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 02:21:27.705 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:27.705 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 387 ms.
17-03-18 02:21:27.705 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 387 ms.
17-03-18 02:21:27.705 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:27.705 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:27.705 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:27.705 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 392 ms.
17-03-18 02:21:27.715 -07 000000629 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 395 ms.
17-03-18 02:21:27.845 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1119
17-03-18 02:21:27.845 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1119
17-03-18 02:21:27.845 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:27.845 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:27.845 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 02:21:27.855 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1119
17-03-18 02:21:27.855 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1119
17-03-18 02:21:27.855 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:27.855 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:27.855 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 02:21:28.035 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:28.035 -07 000000579 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:28.035 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28326 150' command took 2 ms to send, 1307 ms to get response, and 1317 ms overall
17-03-18 02:21:28.035 -07 000000610 INF: Skipping AutoFocus in Tile 16: adopting Best-Z from the cache: -0.129196
17-03-18 02:21:28.035 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 72.3626 mm, moving Z to -0.12920 mm
17-03-18 02:21:28.035 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:28.045 -07 000000455 INF: Y Motor: Entering MoveAbsStepped (target = 115780 steps, sync = True, waitForSettling = True)
17-03-18 02:21:28.045 -07 000000455 INF: Y Motor: Moving to 72.3626 mm, started at 71.5190 mm, delta = 0.8436 mm
17-03-18 02:21:28.045 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:28.045 -07 000000591 INF: Z Motor: Entering MoveAbsStepped (DAC = 28223, sync = True, waitForSettling = False)
17-03-18 02:21:28.045 -07 000000591 INF: Z Motor: Moving to -0.129197 mm, started at -0.128874 mm, distance = -0.32 um
17-03-18 02:21:28.045 -07 000000618 INF: FPGA: Recv YRDPOS 146471
17-03-18 02:21:28.055 -07 000000591 INF: FPGA: Xmit ZDACW 28223\n [Z Motor]
17-03-18 02:21:28.055 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:28.055 -07 000000455 INF: Y Motor: Encoder = 146471 = motor step 114430.5 = 71.5190 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:28.055 -07 000000501 INF: FPGA: Recv ZDACW
17-03-18 02:21:28.055 -07 000000455 INF: Y Motor: Last commanded position = 71.5326 mm (114452.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:28.055 -07 000000455 INF: Y Motor: Moving 1350 steps-28
17-03-18 02:21:28.065 -07 000000591 INF: FPGA: 'ZDACW 28223' command took 0 ms to send, 0 ms to get response, and 16 ms overall
17-03-18 02:21:28.065 -07 000000455 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:28.075 -07 000000591 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:28.075 -07 000000576 INF: FPGA: Recv ZDACR 28223
17-03-18 02:21:28.085 -07 000000591 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:28.085 -07 000000591 INF: Z Motor: MoveAbsStepped took 36 ms (did NOT wait for settling yet))
17-03-18 02:21:28.225 -07 000000590 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 374 ms.
17-03-18 02:21:28.225 -07 000000590 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 374 ms.
17-03-18 02:21:28.225 -07 000000590 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:28.225 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 02:21:28.225 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:21:28.225 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:28.235 -07 000000590 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:21:28.235 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 5 ms.
17-03-18 02:21:28.235 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:21:28.235 -07 000000590 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 02:21:28.435 -07 000000512 INF: FPGA: Recv YMVTILE
17-03-18 02:21:28.435 -07 000000455 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 385 ms overall
17-03-18 02:21:28.485 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:28.485 -07 000000590 INF: FPGA: Recv YRDPOS 148172
17-03-18 02:21:28.495 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:28.495 -07 000000455 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:28.495 -07 000000455 INF: Y Motor: Position error before settling (table move) = -27 encoder counts (-0.013 mm)
17-03-18 02:21:28.495 -07 000000455 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 385 ms, distance = 0.844 mm, average velocity = 2.191 mm/sec
17-03-18 02:21:29.445 -07 000000455 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:29.445 -07 000000462 INF: FPGA: Recv YRDPOS 148172
17-03-18 02:21:29.455 -07 000000455 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:29.455 -07 000000455 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:29.475 -07 000000455 INF: Y Motor: After move to 72.362610, error = -0.013000, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:29.475 -07 000000455 INF: Y Motor: Position error after settling (table move) = -27 encoder counts (-0.013 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:29.475 -07 000000455 INF: Y Motor: Moved to 72.3496 after 1435 ms (table move)
17-03-18 02:21:29.485 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.129197 mm (DAC = 28223)
17-03-18 02:21:29.485 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.485 -07 000000579 INF: FPGA: Recv ZSGSRD 29406
17-03-18 02:21:29.495 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:29.495 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.495 -07 000000444 INF: FPGA: Recv ZSGSRD 29403
17-03-18 02:21:29.505 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.505 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.505 -07 000000467 INF: FPGA: Recv ZSGSRD 29406
17-03-18 02:21:29.515 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.515 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.515 -07 000000430 INF: FPGA: Recv ZSGSRD 29402
17-03-18 02:21:29.525 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.525 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.525 -07 000000462 INF: FPGA: Recv ZSGSRD 29402
17-03-18 02:21:29.535 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.535 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.535 -07 000000606 INF: FPGA: Recv ZSGSRD 29405
17-03-18 02:21:29.545 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.545 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.545 -07 000000576 INF: FPGA: Recv ZSGSRD 29399
17-03-18 02:21:29.555 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.555 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.555 -07 000000591 INF: FPGA: Recv ZSGSRD 29398
17-03-18 02:21:29.565 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.565 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.565 -07 000000502 INF: FPGA: Recv ZSGSRD 29400
17-03-18 02:21:29.575 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.575 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.575 -07 000000629 INF: FPGA: Recv ZSGSRD 29402
17-03-18 02:21:29.585 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.585 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:29.585 -07 000000590 INF: FPGA: Recv ZPIEZORD 24985
17-03-18 02:21:29.595 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.595 -07 000000610 INF: Z Motor: Piezo is near 33.4 V (nominally 0 to 100 V), expect near 43.1 V, since DAC is at 4.307 V. Piezo Error = -9.7 V.
17-03-18 02:21:29.595 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -129.2 um, Read 10 ADC samples: Avg = 29402 (-128.4 uncal um), Error = 0.8 uncal um, Median = 29402 (-128.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29398 (-128.4 uncal um), Max = 29406 (-128.5 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:21:29.595 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29402, posNoise = 4, negNoise = 4
17-03-18 02:21:29.595 -07 000000610 INF: Z Motor: After move to -0.129197, error = -0.000011, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:29.595 -07 000000610 INF: Z Motor: Settle wait time = 1438 ms, measure time = 109 ms (allowed 150 ms), total time = 1547 ms
17-03-18 02:21:29.595 -07 000000610 INF: Z Motor: Waiting extra 41 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:29.645 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1600 ms
17-03-18 02:21:29.645 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:29.645 -07 000000610 INF: ------------ Scan Snapping tile 16 at Y-position 72.349609375, Z-position -0.129208037403191. ----------
17-03-18 02:21:29.645 -07 000000610 INF: Cycle	98	Tile	16	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:29.645 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 28046, sync = True, waitForSettling = True)
17-03-18 02:21:29.645 -07 000000610 INF: Z Motor: Moving to -0.128386 mm, started at -0.129208 mm, distance = 0.82 um
17-03-18 02:21:29.645 -07 000000610 INF: FPGA: Xmit ZDACW 28046\n [Z Motor]
17-03-18 02:21:29.655 -07 000000618 INF: FPGA: Recv ZDACW
17-03-18 02:21:29.655 -07 000000610 INF: FPGA: 'ZDACW 28046' command took 0 ms to send, 0 ms to get response, and 5 ms overall
17-03-18 02:21:29.655 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:29.655 -07 000000591 INF: FPGA: Recv ZDACR 28046
17-03-18 02:21:29.665 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.665 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:29.815 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.815 -07 000000606 INF: FPGA: Recv ZSGSRD 29277
17-03-18 02:21:29.825 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:29.825 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.825 -07 000000626 INF: FPGA: Recv ZSGSRD 29274
17-03-18 02:21:29.835 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.835 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.835 -07 000000579 INF: FPGA: Recv ZSGSRD 29279
17-03-18 02:21:29.845 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.845 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.845 -07 000000461 INF: FPGA: Recv ZSGSRD 29272
17-03-18 02:21:29.855 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.855 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.855 -07 000000462 INF: FPGA: Recv ZSGSRD 29276
17-03-18 02:21:29.865 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.865 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.865 -07 000000430 INF: FPGA: Recv ZSGSRD 29276
17-03-18 02:21:29.875 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.875 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.875 -07 000000561 INF: FPGA: Recv ZSGSRD 29273
17-03-18 02:21:29.885 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.885 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.885 -07 000000467 INF: FPGA: Recv ZSGSRD 29274
17-03-18 02:21:29.895 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.895 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.895 -07 000000502 INF: FPGA: Recv ZSGSRD 29275
17-03-18 02:21:29.905 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.905 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:29.905 -07 000000591 INF: FPGA: Recv ZSGSRD 29278
17-03-18 02:21:29.915 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.915 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:29.915 -07 000000444 INF: FPGA: Recv ZPIEZORD 24813
17-03-18 02:21:29.925 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:29.925 -07 000000610 INF: Z Motor: Piezo is near 33.0 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.280 V. Piezo Error = -9.8 V.
17-03-18 02:21:29.925 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.4 um, Read 10 ADC samples: Avg = 29275 (-127.6 uncal um), Error = 0.8 uncal um, Median = 29276 (-127.6 uncal um), StdDev = 2 (0.0 uncal um), Range = 7 (0.0 uncal um), Min = 29272 (-127.6 uncal um), Max = 29279 (-127.6 uncal um), Pos Noise = 4 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:21:29.925 -07 000000610 INF: Z Motor: ADC noise = 4, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29275, posNoise = 4, negNoise = 3
17-03-18 02:21:29.925 -07 000000610 INF: Z Motor: After move to -0.128386, error = -0.000006, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:29.925 -07 000000610 INF: Z Motor: MoveAbsStepped took 276 ms)
17-03-18 02:21:29.925 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:29.925 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:29.925 -07 000000467 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:29.925 -07 000000430 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:29.925 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:29.925 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:29.925 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:29.925 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:29.925 -07 000000569 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:29.925 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:29.925 -07 000000576 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:29.925 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:29.925 -07 000000569 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:21:29.925 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:29.935 -07 000000576 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 4 ms.
17-03-18 02:21:29.935 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:29.945 -07 000000569 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 02:21:29.945 -07 000000569 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 02:21:29.945 -07 000000576 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:21:29.945 -07 000000576 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 20 ms.
17-03-18 02:21:29.945 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28223 150\n [Camera]
17-03-18 02:21:30.145 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:30.545 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:30.545 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:30.545 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:30.545 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:30.545 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:21:30.545 -07 000000618 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:30.545 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:30.545 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:30.545 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:30.545 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:21:30.735 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28223 779
17-03-18 02:21:30.885 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:30.925 -07 000000444 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 02:21:30.925 -07 000000444 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:21:30.925 -07 000000444 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:30.935 -07 000000444 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:30.935 -07 000000444 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:21:30.935 -07 000000626 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 383 ms.
17-03-18 02:21:30.935 -07 000000626 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 383 ms.
17-03-18 02:21:30.935 -07 000000626 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:30.935 -07 000000626 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:30.945 -07 000000626 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 394 ms.
17-03-18 02:21:31.075 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:31.075 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:31.075 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:31.075 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:31.075 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) start.
17-03-18 02:21:31.075 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:31.075 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:31.075 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:31.205 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:31.205 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) start.
17-03-18 02:21:31.265 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:31.265 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:31.265 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28223 150' command took 2 ms to send, 1305 ms to get response, and 1317 ms overall
17-03-18 02:21:31.265 -07 000000610 INF: TopSurface Best Z is: -0.172880 - BottomSurface Best Z is: -0.133503 - Using FocusModel for surface 1 - Best Z for this model is: -0.133503
17-03-18 02:21:31.265 -07 000000610 INF: ----- AutoFocus: Snapping image at tile 17 at Y-position 72.349609375, Z-Position -0.128392162461187. ------
17-03-18 02:21:31.275 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:21:31.275 -07 000000502 INF: Y Motor: MoveYZ optimized starting. Moving Y to 73.1926 mm, moving Z to -0.13497 mm
17-03-18 02:21:31.275 -07 000000502 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:31.275 -07 000000501 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:21:31.275 -07 000000424 INF: Y Motor: Entering MoveAbsStepped (target = 117108 steps, sync = True, waitForSettling = True)
17-03-18 02:21:31.275 -07 000000424 INF: Y Motor: Moving to 73.1926 mm, started at 72.3496 mm, delta = 0.8430 mm
17-03-18 02:21:31.275 -07 000000561 INF: Z Motor: Entering MoveAbsStepped (DAC = 29484, sync = True, waitForSettling = False)
17-03-18 02:21:31.275 -07 000000561 INF: Z Motor: Moving to -0.134969 mm, started at -0.128392 mm, distance = -6.58 um
17-03-18 02:21:31.285 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:31.285 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:21:31.285 -07 000000569 INF: FPGA: Recv YRDPOS 148172
17-03-18 02:21:31.295 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 14 ms overall
17-03-18 02:21:31.295 -07 000000424 INF: Y Motor: Encoder = 148172 = motor step 115759.4 = 72.3496 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:31.295 -07 000000424 INF: Y Motor: Last commanded position = 72.3626 mm (115780.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:31.295 -07 000000424 INF: Y Motor: Moving 1349 steps-27
17-03-18 02:21:31.295 -07 000000561 INF: FPGA: Xmit ZDACW 29484\n [Z Motor]
17-03-18 02:21:31.295 -07 000000467 INF: FPGA: Recv ZDACW
17-03-18 02:21:31.305 -07 000000561 INF: FPGA: 'ZDACW 29484' command took 1 ms to send, 0 ms to get response, and 23 ms overall
17-03-18 02:21:31.305 -07 000000606 INF: FPGA: Xmit FOCMRRFOC\n [FocusMirror]
17-03-18 02:21:31.315 -07 000000424 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:31.325 -07 000000561 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:31.325 -07 000000512 INF: FPGA: Recv ZDACR 29484
17-03-18 02:21:31.335 -07 000000561 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:21:31.335 -07 000000561 INF: Z Motor: MoveAbsStepped took 53 ms (did NOT wait for settling yet))
17-03-18 02:21:31.465 -07 000000576 INF: Camera: sBCa_ReadImage(785074288, 2281705520, 0x0, 391868352) end. Duration was 388 ms.
17-03-18 02:21:31.465 -07 000000576 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 02:21:31.465 -07 000000576 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:31.465 -07 000000576 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:31.465 -07 000000576 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 02:21:31.475 -07 000000590 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:31.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:31.505 -07 000000569 INF: FPGA: Recv FOCMRRFOC
17-03-18 02:21:31.505 -07 000000606 INF: FPGA: 'FOCMRRFOC' command took 0 ms to send, 193 ms to get response, and 222 ms overall
17-03-18 02:21:31.585 -07 000000591 INF: Camera: sBCa_ReadImage(785074704, 591793880, 0x0, 418435064) end. Duration was 375 ms.
17-03-18 02:21:31.585 -07 000000591 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 375 ms.
17-03-18 02:21:31.585 -07 000000591 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:31.585 -07 000000591 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:31.595 -07 000000591 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 515 ms.
17-03-18 02:21:31.685 -07 000000501 INF: FPGA: Recv YMVTILE
17-03-18 02:21:31.685 -07 000000424 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:21:31.735 -07 000000629 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.024884,
17-03-18 02:21:31.755 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:31.755 -07 000000512 INF: FPGA: Recv YRDPOS 149865
17-03-18 02:21:31.765 -07 000000424 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 24 ms overall
17-03-18 02:21:31.765 -07 000000424 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:31.765 -07 000000424 INF: Y Motor: Position error before settling (table move) = -33 encoder counts (-0.016 mm)
17-03-18 02:21:31.765 -07 000000424 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.843 mm, average velocity = 2.118 mm/sec
17-03-18 02:21:32.715 -07 000000424 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:32.715 -07 000000569 INF: FPGA: Recv YRDPOS 149865
17-03-18 02:21:32.725 -07 000000424 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.725 -07 000000424 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:32.745 -07 000000424 INF: Y Motor: After move to 73.192604, error = -0.016335, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:32.745 -07 000000424 INF: Y Motor: Position error after settling (table move) = -33 encoder counts (-0.016 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:32.745 -07 000000424 INF: Y Motor: Moved to 73.1763 after 1472 ms (table move)
17-03-18 02:21:32.755 -07 000000502 INF: Z Motor: EndOfMoveAbsStepped: target = -0.134969 mm (DAC = 29484)
17-03-18 02:21:32.755 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.755 -07 000000462 INF: FPGA: Recv ZSGSRD 30301
17-03-18 02:21:32.765 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 7 ms overall
17-03-18 02:21:32.765 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.765 -07 000000626 INF: FPGA: Recv ZSGSRD 30302
17-03-18 02:21:32.775 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.775 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.775 -07 000000501 INF: FPGA: Recv ZSGSRD 30304
17-03-18 02:21:32.785 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.785 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.785 -07 000000590 INF: FPGA: Recv ZSGSRD 30295
17-03-18 02:21:32.795 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.795 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.795 -07 000000629 INF: FPGA: Recv ZSGSRD 30294
17-03-18 02:21:32.805 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.805 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.805 -07 000000579 INF: FPGA: Recv ZSGSRD 30300
17-03-18 02:21:32.815 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.815 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.815 -07 000000455 INF: FPGA: Recv ZSGSRD 30297
17-03-18 02:21:32.825 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.825 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.825 -07 000000501 INF: FPGA: Recv ZSGSRD 30299
17-03-18 02:21:32.835 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.835 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.835 -07 000000444 INF: FPGA: Recv ZSGSRD 30299
17-03-18 02:21:32.845 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.845 -07 000000502 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:32.845 -07 000000606 INF: FPGA: Recv ZSGSRD 30295
17-03-18 02:21:32.855 -07 000000502 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.855 -07 000000502 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:32.855 -07 000000569 INF: FPGA: Recv ZPIEZORD 26158
17-03-18 02:21:32.865 -07 000000502 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:32.865 -07 000000502 INF: Z Motor: Piezo is near 35.9 V (nominally 0 to 100 V), expect near 45.0 V, since DAC is at 4.499 V. Piezo Error = -9.1 V.
17-03-18 02:21:32.865 -07 000000502 INF: Z Motor: ReadAdcAverage: Commanded Z = -135.0 um, Read 10 ADC samples: Avg = 30299 (-134.2 uncal um), Error = 0.8 uncal um, Median = 30299 (-134.2 uncal um), StdDev = 3 (0.0 uncal um), Range = 10 (0.1 uncal um), Min = 30294 (-134.1 uncal um), Max = 30304 (-134.2 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 5 (0.0 uncal um)
17-03-18 02:21:32.865 -07 000000502 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 30299, posNoise = 5, negNoise = 5
17-03-18 02:21:32.865 -07 000000502 INF: Z Motor: After move to -0.134969, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:32.865 -07 000000502 INF: Z Motor: Settle wait time = 1476 ms, measure time = 108 ms (allowed 150 ms), total time = 1584 ms
17-03-18 02:21:32.865 -07 000000502 INF: Z Motor: Waiting extra 42 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:32.915 -07 000000502 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1638 ms
17-03-18 02:21:32.915 -07 000000502 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:32.915 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:32.915 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:32.915 -07 000000618 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:32.915 -07 000000512 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:32.915 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger start.
17-03-18 02:21:32.915 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:32.915 -07 000000462 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:32.915 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) start.
17-03-18 02:21:32.925 -07 000000462 INF: Camera: sBCa_DisarmCaptureImageROITriggered(785074288) end. Duration was 2 ms.
17-03-18 02:21:32.925 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) start.
17-03-18 02:21:32.935 -07 000000462 INF: Camera: sBCa_ArmCaptureImageROITriggered(785074288, 1024, 512, 255) end. Duration was 12 ms.
17-03-18 02:21:32.935 -07 000000462 INF: Disarm and arm camera sensor 0: ROITrigger end. Duration was 16 ms.
17-03-18 02:21:32.935 -07 000000610 INF: FPGA: Xmit CAMSNAP 1 2 300\n [Camera]
17-03-18 02:21:32.985 -07 000000467 INF: FPGA: Recv @CAMSNAP turning led on 40
17-03-18 02:21:33.285 -07 000000455 INF: FPGA: Recv @CAMSNAP img rdy 340
17-03-18 02:21:33.285 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name Focus T. Args Cmd: img rdy 340
17-03-18 02:21:33.285 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. start.
17-03-18 02:21:33.285 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) start.
17-03-18 02:21:33.315 -07 000000430 INF: FPGA: Recv @CAMSNAP 380
17-03-18 02:21:33.325 -07 000000461 INF: FPGA: Recv CAMSNAP
17-03-18 02:21:33.325 -07 000000610 INF: FPGA: 'CAMSNAP 1 2 300' command took 1 ms to send, 380 ms to get response, and 384 ms overall
17-03-18 02:21:33.415 -07 000000005 INF: Camera: sBCa_ReadImageROI(785074288, 1024, 512, 639799168, 0x0, 559484976) end. Duration was 127 ms.
17-03-18 02:21:33.415 -07 000000005 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:33.415 -07 000000005 INF: Camera: CopyActivePixFullImage end. Duration was 0 ms.
17-03-18 02:21:33.415 -07 000000005 INF: Camera 1: ReadROIImage (data transfer) from sensor 0. end. Duration was 130 ms.
17-03-18 02:21:33.425 -07 000000606 INF: FPGA: Xmit FOCMRRCUR 80\n [FocusMirror]
17-03-18 02:21:33.425 -07 000000561 INF: Autofocus start
17-03-18 02:21:33.425 -07 000000561 INF: MeasureProfile start
17-03-18 02:21:33.425 -07 000000579 INF: FPGA: Recv FOCMRRCUR 
17-03-18 02:21:33.435 -07 000000606 INF: FPGA: 'FOCMRRCUR 80' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:33.435 -07 000000606 INF: FPGA: Xmit FOCMRRIMG\n [FocusMirror]
17-03-18 02:21:33.435 -07 000000561 INF: MeasureProfile done
17-03-18 02:21:33.435 -07 000000561 INF: X=0  Z correction [um]=-0.02394831
17-03-18 02:21:33.435 -07 000000561 INF: Autofocus finished
17-03-18 02:21:33.635 -07 000000444 INF: FPGA: Recv FOCMRRIMG
17-03-18 02:21:33.635 -07 000000606 INF: FPGA: 'FOCMRRIMG' command took 0 ms to send, 193 ms to get response, and 202 ms overall
17-03-18 02:21:33.635 -07 000000610 INF: ------------ Scan Snapping tile 17 at Y-position 73.17626953125, Z-position -0.13497055569435. ----------
17-03-18 02:21:33.635 -07 000000610 INF: Cycle	98	Tile	17	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:33.645 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27992, sync = True, waitForSettling = True)
17-03-18 02:21:33.645 -07 000000610 INF: Z Motor: Moving to -0.128139 mm, started at -0.134971 mm, distance = 6.83 um
17-03-18 02:21:33.645 -07 000000610 INF: FPGA: Xmit ZDACW 27992\n [Z Motor]
17-03-18 02:21:33.645 -07 000000424 INF: FPGA: Recv ZDACW
17-03-18 02:21:33.655 -07 000000610 INF: FPGA: 'ZDACW 27992' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.655 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:33.655 -07 000000444 INF: FPGA: Recv ZDACR 27992
17-03-18 02:21:33.665 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.665 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:33.815 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.815 -07 000000576 INF: FPGA: Recv ZSGSRD 29236
17-03-18 02:21:33.825 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:33.825 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.825 -07 000000626 INF: FPGA: Recv ZSGSRD 29236
17-03-18 02:21:33.835 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.835 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.835 -07 000000590 INF: FPGA: Recv ZSGSRD 29234
17-03-18 02:21:33.845 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.845 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.845 -07 000000626 INF: FPGA: Recv ZSGSRD 29238
17-03-18 02:21:33.855 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.855 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.855 -07 000000590 INF: FPGA: Recv ZSGSRD 29236
17-03-18 02:21:33.865 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.865 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.865 -07 000000461 INF: FPGA: Recv ZSGSRD 29234
17-03-18 02:21:33.875 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.875 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.875 -07 000000626 INF: FPGA: Recv ZSGSRD 29235
17-03-18 02:21:33.885 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 8 ms overall
17-03-18 02:21:33.885 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.885 -07 000000569 INF: FPGA: Recv ZSGSRD 29237
17-03-18 02:21:33.895 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.895 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.895 -07 000000626 INF: FPGA: Recv ZSGSRD 29242
17-03-18 02:21:33.905 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.905 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:33.905 -07 000000444 INF: FPGA: Recv ZSGSRD 29240
17-03-18 02:21:33.915 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.915 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:33.915 -07 000000576 INF: FPGA: Recv ZPIEZORD 24761
17-03-18 02:21:33.925 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:33.925 -07 000000610 INF: Z Motor: Piezo is near 32.9 V (nominally 0 to 100 V), expect near 42.7 V, since DAC is at 4.271 V. Piezo Error = -9.8 V.
17-03-18 02:21:33.925 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.1 um, Read 10 ADC samples: Avg = 29237 (-127.4 uncal um), Error = 0.8 uncal um, Median = 29236 (-127.4 uncal um), StdDev = 3 (0.0 uncal um), Range = 8 (0.1 uncal um), Min = 29234 (-127.4 uncal um), Max = 29242 (-127.4 uncal um), Pos Noise = 5 (0.0 uncal um), Neg Noise = 3 (0.0 uncal um)
17-03-18 02:21:33.925 -07 000000610 INF: Z Motor: ADC noise = 5, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29237, posNoise = 5, negNoise = 3
17-03-18 02:21:33.925 -07 000000610 INF: Z Motor: After move to -0.128139, error = -0.000009, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:33.925 -07 000000610 INF: Z Motor: MoveAbsStepped took 280 ms)
17-03-18 02:21:33.925 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:33.925 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:33.925 -07 000000561 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:33.925 -07 000000629 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:33.925 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:33.925 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:33.925 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:33.925 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:33.925 -07 000000444 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:33.925 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:33.925 -07 000000502 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:33.925 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:33.925 -07 000000444 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:33.925 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:33.925 -07 000000502 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:33.925 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:33.935 -07 000000444 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 9 ms.
17-03-18 02:21:33.935 -07 000000444 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 14 ms.
17-03-18 02:21:33.935 -07 000000502 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 9 ms.
17-03-18 02:21:33.945 -07 000000502 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 02:21:33.945 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28168 150\n [Camera]
17-03-18 02:21:34.145 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP turning red on 193
17-03-18 02:21:34.545 -07 000000455 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:34.545 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:34.545 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:34.545 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:34.545 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:34.545 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) start.
17-03-18 02:21:34.545 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:34.545 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:34.545 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:34.545 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) start.
17-03-18 02:21:34.735 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28168 779
17-03-18 02:21:34.885 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:34.925 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1147047128, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 02:21:34.925 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 02:21:34.925 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:34.925 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:34.925 -07 000000629 INF: Camera: sBCa_ReadImage(785074288, 1077874736, 0x0, 391868352) end. Duration was 379 ms.
17-03-18 02:21:34.925 -07 000000629 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 380 ms.
17-03-18 02:21:34.925 -07 000000629 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:34.935 -07 000000629 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:34.935 -07 000000629 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 388 ms.
17-03-18 02:21:34.935 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 02:21:35.075 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:35.075 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:35.075 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:35.185 -07 000000561 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:35.185 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:35.185 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:35.195 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:35.195 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) start.
17-03-18 02:21:35.195 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:35.195 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:21:35.265 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:21:35.265 -07 000000444 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:35.265 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28168 150' command took 2 ms to send, 1315 ms to get response, and 1320 ms overall
17-03-18 02:21:35.265 -07 000000610 INF: Skipping AutoFocus in Tile 18: adopting Best-Z from the cache: -0.128467
17-03-18 02:21:35.265 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.0226 mm, moving Z to -0.12847 mm
17-03-18 02:21:35.265 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:35.265 -07 000000501 INF: Y Motor: Entering MoveAbsStepped (target = 118436 steps, sync = True, waitForSettling = True)
17-03-18 02:21:35.265 -07 000000501 INF: Y Motor: Moving to 74.0226 mm, started at 73.1763 mm, delta = 0.8463 mm
17-03-18 02:21:35.275 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:35.275 -07 000000618 INF: Z Motor: Entering MoveAbsStepped (DAC = 28064, sync = True, waitForSettling = False)
17-03-18 02:21:35.275 -07 000000618 INF: Z Motor: Moving to -0.128469 mm, started at -0.128148 mm, distance = -0.32 um
17-03-18 02:21:35.275 -07 000000467 INF: FPGA: Recv YRDPOS 149865
17-03-18 02:21:35.285 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:35.285 -07 000000501 INF: Y Motor: Encoder = 149865 = motor step 117082.0 = 73.1763 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:35.285 -07 000000501 INF: Y Motor: Last commanded position = 73.1926 mm (117108.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:35.285 -07 000000501 INF: Y Motor: Moving 1354 steps-33
17-03-18 02:21:35.285 -07 000000618 INF: FPGA: Xmit ZDACW 28064\n [Z Motor]
17-03-18 02:21:35.285 -07 000000512 INF: FPGA: Recv ZDACW
17-03-18 02:21:35.295 -07 000000618 INF: FPGA: 'ZDACW 28064' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:35.295 -07 000000618 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:35.295 -07 000000629 INF: FPGA: Recv ZDACR 28064
17-03-18 02:21:35.305 -07 000000501 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:35.305 -07 000000618 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:35.305 -07 000000618 INF: Z Motor: MoveAbsStepped took 30 ms (did NOT wait for settling yet))
17-03-18 02:21:35.585 -07 000000462 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 387 ms.
17-03-18 02:21:35.585 -07 000000462 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 387 ms.
17-03-18 02:21:35.585 -07 000000462 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:35.585 -07 000000430 INF: Camera: sBCa_ReadImage(785074288, 1406045800, 0x0, 391868352) end. Duration was 393 ms.
17-03-18 02:21:35.585 -07 000000430 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 02:21:35.585 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:35.585 -07 000000462 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:35.585 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:35.585 -07 000000430 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 514 ms.
17-03-18 02:21:35.595 -07 000000462 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 404 ms.
17-03-18 02:21:35.675 -07 000000444 INF: FPGA: Recv YMVTILE
17-03-18 02:21:35.675 -07 000000501 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:21:35.715 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:35.715 -07 000000618 INF: FPGA: Recv YRDPOS 151569
17-03-18 02:21:35.725 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:35.725 -07 000000501 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:35.725 -07 000000501 INF: Y Motor: Position error before settling (table move) = -29 encoder counts (-0.014 mm)
17-03-18 02:21:35.725 -07 000000501 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 397 ms, distance = 0.846 mm, average velocity = 2.132 mm/sec
17-03-18 02:21:36.475 -07 000000626 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:36.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:36.675 -07 000000501 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:36.675 -07 000000455 INF: FPGA: Recv YRDPOS 151569
17-03-18 02:21:36.685 -07 000000501 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:36.685 -07 000000501 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:36.705 -07 000000501 INF: Y Motor: After move to 74.022606, error = -0.014305, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:36.705 -07 000000501 INF: Y Motor: Position error after settling (table move) = -29 encoder counts (-0.014 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:36.705 -07 000000501 INF: Y Motor: Moved to 74.0083 after 1431 ms (table move)
17-03-18 02:21:36.705 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.128469 mm (DAC = 28064)
17-03-18 02:21:36.705 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.705 -07 000000591 INF: FPGA: Recv ZSGSRD 29293
17-03-18 02:21:36.715 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 6 ms overall
17-03-18 02:21:36.715 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.715 -07 000000579 INF: FPGA: Recv ZSGSRD 29290
17-03-18 02:21:36.725 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.725 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.725 -07 000000512 INF: FPGA: Recv ZSGSRD 29288
17-03-18 02:21:36.735 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.735 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.735 -07 000000626 INF: FPGA: Recv ZSGSRD 29287
17-03-18 02:21:36.745 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.745 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.745 -07 000000462 INF: FPGA: Recv ZSGSRD 29286
17-03-18 02:21:36.755 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.755 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.755 -07 000000591 INF: FPGA: Recv ZSGSRD 29297
17-03-18 02:21:36.765 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.765 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.765 -07 000000467 INF: FPGA: Recv ZSGSRD 29296
17-03-18 02:21:36.775 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.775 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.775 -07 000000455 INF: FPGA: Recv ZSGSRD 29289
17-03-18 02:21:36.785 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.795 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.795 -07 000000461 INF: FPGA: Recv ZSGSRD 29286
17-03-18 02:21:36.805 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 19 ms overall
17-03-18 02:21:36.805 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:36.805 -07 000000467 INF: FPGA: Recv ZSGSRD 29286
17-03-18 02:21:36.815 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.815 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:36.815 -07 000000444 INF: FPGA: Recv ZPIEZORD 24884
17-03-18 02:21:36.825 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.825 -07 000000610 INF: Z Motor: Piezo is near 33.2 V (nominally 0 to 100 V), expect near 42.8 V, since DAC is at 4.282 V. Piezo Error = -9.7 V.
17-03-18 02:21:36.825 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -128.5 um, Read 10 ADC samples: Avg = 29290 (-127.7 uncal um), Error = 0.8 uncal um, Median = 29288 (-127.7 uncal um), StdDev = 4 (0.0 uncal um), Range = 11 (0.1 uncal um), Min = 29286 (-127.7 uncal um), Max = 29297 (-127.8 uncal um), Pos Noise = 7 (0.0 uncal um), Neg Noise = 4 (0.0 uncal um)
17-03-18 02:21:36.825 -07 000000610 INF: Z Motor: ADC noise = 7, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29290, posNoise = 7, negNoise = 4
17-03-18 02:21:36.825 -07 000000610 INF: Z Motor: After move to -0.128469, error = -0.000020, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:36.825 -07 000000610 INF: Z Motor: Settle wait time = 1433 ms, measure time = 117 ms (allowed 150 ms), total time = 1550 ms
17-03-18 02:21:36.825 -07 000000610 INF: Z Motor: Waiting extra 33 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:36.865 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1592 ms
17-03-18 02:21:36.865 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:36.865 -07 000000610 INF: ------------ Scan Snapping tile 18 at Y-position 74.00830078125, Z-position -0.128488525643313. ----------
17-03-18 02:21:36.865 -07 000000610 INF: Cycle	98	Tile	18	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:36.865 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27887, sync = True, waitForSettling = True)
17-03-18 02:21:36.865 -07 000000610 INF: Z Motor: Moving to -0.127659 mm, started at -0.128489 mm, distance = 0.83 um
17-03-18 02:21:36.865 -07 000000610 INF: FPGA: Xmit ZDACW 27887\n [Z Motor]
17-03-18 02:21:36.865 -07 000000590 INF: FPGA: Recv ZDACW
17-03-18 02:21:36.875 -07 000000610 INF: FPGA: 'ZDACW 27887' command took 0 ms to send, 0 ms to get response, and 4 ms overall
17-03-18 02:21:36.875 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:36.875 -07 000000561 INF: FPGA: Recv ZDACR 27887
17-03-18 02:21:36.885 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:36.885 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:37.035 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.035 -07 000000430 INF: FPGA: Recv ZSGSRD 29159
17-03-18 02:21:37.045 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:37.045 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.045 -07 000000462 INF: FPGA: Recv ZSGSRD 29162
17-03-18 02:21:37.055 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.055 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.055 -07 000000502 INF: FPGA: Recv ZSGSRD 29159
17-03-18 02:21:37.065 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.065 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.065 -07 000000579 INF: FPGA: Recv ZSGSRD 29162
17-03-18 02:21:37.075 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.075 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.075 -07 000000455 INF: FPGA: Recv ZSGSRD 29164
17-03-18 02:21:37.085 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.085 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.085 -07 000000629 INF: FPGA: Recv ZSGSRD 29167
17-03-18 02:21:37.095 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.105 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.105 -07 000000591 INF: Predictive Diagnostic Log Reagent Chiller Temperature Below Limit: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.015368,
17-03-18 02:21:37.105 -07 000000590 INF: FPGA: Recv ZSGSRD 29163
17-03-18 02:21:37.115 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 18 ms overall
17-03-18 02:21:37.135 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.135 -07 000000501 INF: FPGA: Recv ZSGSRD 29162
17-03-18 02:21:37.145 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:21:37.165 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.165 -07 000000576 INF: FPGA: Recv ZSGSRD 29161
17-03-18 02:21:37.175 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 29 ms overall
17-03-18 02:21:37.175 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:37.175 -07 000000501 INF: FPGA: Recv ZSGSRD 29155
17-03-18 02:21:37.185 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.185 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:37.185 -07 000000444 INF: FPGA: Recv ZPIEZORD 24668
17-03-18 02:21:37.195 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:37.195 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.6 V, since DAC is at 4.255 V. Piezo Error = -9.9 V.
17-03-18 02:21:37.195 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.7 um, Read 10 ADC samples: Avg = 29161 (-126.9 uncal um), Error = 0.8 uncal um, Median = 29162 (-126.9 uncal um), StdDev = 3 (0.0 uncal um), Range = 12 (0.1 uncal um), Min = 29155 (-126.8 uncal um), Max = 29167 (-126.9 uncal um), Pos Noise = 6 (0.0 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:37.195 -07 000000610 INF: Z Motor: ADC noise = 6, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29161, posNoise = 6, negNoise = 6
17-03-18 02:21:37.195 -07 000000610 INF: Z Motor: After move to -0.127659, error = -0.000001, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:37.195 -07 000000610 INF: Z Motor: MoveAbsStepped took 325 ms)
17-03-18 02:21:37.195 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:37.195 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:37.195 -07 000000590 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:37.195 -07 000000424 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:37.195 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:37.195 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:37.195 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:37.195 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:37.195 -07 000000626 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:37.195 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:37.195 -07 000000501 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 0 ms.
17-03-18 02:21:37.195 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:37.195 -07 000000501 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 2 ms.
17-03-18 02:21:37.195 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:37.195 -07 000000626 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 3 ms.
17-03-18 02:21:37.195 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:37.205 -07 000000501 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 8 ms.
17-03-18 02:21:37.205 -07 000000501 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 12 ms.
17-03-18 02:21:37.205 -07 000000626 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 10 ms.
17-03-18 02:21:37.205 -07 000000626 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 15 ms.
17-03-18 02:21:37.215 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 28064 150\n [Camera]
17-03-18 02:21:37.415 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:37.805 -07 000000502 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:37.805 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:37.805 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:37.805 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:37.805 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) start.
17-03-18 02:21:37.805 -07 000000579 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:37.805 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:37.805 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:37.815 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:37.815 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) start.
17-03-18 02:21:37.995 -07 000000569 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 28064 779
17-03-18 02:21:38.145 -07 000000462 INF: FPGA: Recv @CAMDBLSNAP turning grn on 929
17-03-18 02:21:38.185 -07 000000502 INF: Camera: sBCa_ReadImage(785074704, 1441468064, 0x0, 418435064) end. Duration was 373 ms.
17-03-18 02:21:38.185 -07 000000502 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 373 ms.
17-03-18 02:21:38.185 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:38.185 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:38.185 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1147047128, 0x0, 391868352) end. Duration was 382 ms.
17-03-18 02:21:38.195 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 382 ms.
17-03-18 02:21:38.195 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:38.195 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:38.195 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 386 ms.
17-03-18 02:21:38.195 -07 000000502 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 02:21:38.335 -07 000000512 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:38.345 -07 000000606 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:38.345 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:38.345 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:38.345 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:38.345 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:38.345 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) start.
17-03-18 02:21:38.345 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:38.345 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:38.345 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) start.
17-03-18 02:21:38.525 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP 1310
17-03-18 02:21:38.535 -07 000000462 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:38.535 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 28064 150' command took 2 ms to send, 1310 ms to get response, and 1317 ms overall
17-03-18 02:21:38.535 -07 000000610 INF: Skipping AutoFocus in Tile 19: adopting Best-Z from the cache: -0.127506
17-03-18 02:21:38.535 -07 000000610 INF: Y Motor: MoveYZ optimized starting. Moving Y to 74.8526 mm, moving Z to -0.12751 mm
17-03-18 02:21:38.535 -07 000000610 INF: Y Motor: Temporarily changing Y settling times from 3000 or 1100 to 2850 or 950 ms because of parallel Y move
17-03-18 02:21:38.535 -07 000000512 INF: Z Motor: Entering MoveAbsStepped (DAC = 27854, sync = True, waitForSettling = False)
17-03-18 02:21:38.535 -07 000000569 INF: Y Motor: Entering MoveAbsStepped (target = 119764 steps, sync = True, waitForSettling = True)
17-03-18 02:21:38.535 -07 000000569 INF: Y Motor: Moving to 74.8526 mm, started at 74.0083 mm, delta = 0.8443 mm
17-03-18 02:21:38.535 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:38.535 -07 000000512 INF: Z Motor: Moving to -0.127507 mm, started at -0.127660 mm, distance = 0.15 um
17-03-18 02:21:38.535 -07 000000561 INF: FPGA: Recv YRDPOS 151569
17-03-18 02:21:38.545 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:38.545 -07 000000569 INF: Y Motor: Encoder = 151569 = motor step 118413.3 = 74.0083 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:38.545 -07 000000569 INF: Y Motor: Last commanded position = 74.0226 mm (118436.2 steps), delta from last commanded position = 0.8300 mm (1328.0 steps). UsingTableMove = True
17-03-18 02:21:38.545 -07 000000569 INF: Y Motor: Moving 1351 steps-29
17-03-18 02:21:38.545 -07 000000512 INF: FPGA: Xmit ZDACW 27854\n [Z Motor]
17-03-18 02:21:38.545 -07 000000579 INF: FPGA: Recv ZDACW
17-03-18 02:21:38.555 -07 000000512 INF: FPGA: 'ZDACW 27854' command took 1 ms to send, 0 ms to get response, and 13 ms overall
17-03-18 02:21:38.555 -07 000000512 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:38.555 -07 000000455 INF: FPGA: Recv ZDACR 27854
17-03-18 02:21:38.565 -07 000000512 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:38.565 -07 000000512 INF: Z Motor: MoveAbsStepped took 24 ms (did NOT wait for settling yet))
17-03-18 02:21:38.565 -07 000000569 INF: FPGA: Xmit YMVTILE 1327\n [Y Motor]
17-03-18 02:21:38.735 -07 000000501 INF: Camera: sBCa_ReadImage(785074288, 1476890328, 0x0, 391868352) end. Duration was 385 ms.
17-03-18 02:21:38.735 -07 000000501 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 385 ms.
17-03-18 02:21:38.735 -07 000000501 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:38.735 -07 000000430 INF: Camera: sBCa_ReadImage(785074704, 2147487792, 0x0, 418435064) end. Duration was 386 ms.
17-03-18 02:21:38.735 -07 000000430 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 386 ms.
17-03-18 02:21:38.735 -07 000000430 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:38.735 -07 000000501 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:38.735 -07 000000501 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 391 ms.
17-03-18 02:21:38.735 -07 000000430 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:38.745 -07 000000430 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 398 ms.
17-03-18 02:21:38.935 -07 000000561 INF: FPGA: Recv YMVTILE
17-03-18 02:21:38.935 -07 000000569 INF: FPGA: 'YMVTILE 1327' command took 0 ms to send, 368 ms to get response, and 397 ms overall
17-03-18 02:21:38.965 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:38.965 -07 000000455 INF: FPGA: Recv YRDPOS 153256
17-03-18 02:21:38.975 -07 000000569 INF: FPGA: 'YRDPOS' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:38.975 -07 000000569 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:38.975 -07 000000569 INF: Y Motor: Position error before settling (table move) = -42 encoder counts (-0.021 mm)
17-03-18 02:21:38.975 -07 000000569 INF: Y Motor: FPGA table move command 'YMVTILE 1327' took 398 ms, distance = 0.844 mm, average velocity = 2.121 mm/sec
17-03-18 02:21:39.925 -07 000000569 INF: FPGA: Xmit YRDPOS\n [Y Motor]
17-03-18 02:21:39.925 -07 000000461 INF: FPGA: Recv YRDPOS 153256
17-03-18 02:21:39.935 -07 000000569 INF: FPGA: 'YRDPOS' command took 1 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:39.935 -07 000000569 INF: Y Motor: Encoder = 153256 = motor step 119731.3 = 74.8320 mm (step is ~0.63 um, encoder count is ~0.49 um)
17-03-18 02:21:39.945 -07 000000569 INF: Y Motor: After move to 74.852608, error = -0.020576, min/max error = -0.022606/0.004383, tolerance = 0.500000 mm
17-03-18 02:21:39.945 -07 000000569 INF: Y Motor: Position error after settling (table move) = -42 encoder counts (-0.021 mm), Delta during settling = 0 counts (0.000 mm)
17-03-18 02:21:39.945 -07 000000569 INF: Y Motor: Moved to 74.8320 after 1412 ms (table move)
17-03-18 02:21:39.955 -07 000000610 INF: Z Motor: EndOfMoveAbsStepped: target = -0.127507 mm (DAC = 27854)
17-03-18 02:21:39.955 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:39.955 -07 000000512 INF: FPGA: Recv ZSGSRD 29148
17-03-18 02:21:39.965 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:39.965 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:39.965 -07 000000467 INF: FPGA: Recv ZSGSRD 29132
17-03-18 02:21:39.975 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:39.975 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:39.975 -07 000000462 INF: FPGA: Recv ZSGSRD 29134
17-03-18 02:21:39.985 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:39.985 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:39.985 -07 000000502 INF: FPGA: Recv ZSGSRD 29136
17-03-18 02:21:39.995 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:39.995 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:39.995 -07 000000576 INF: FPGA: Recv ZSGSRD 29136
17-03-18 02:21:40.005 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.005 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.005 -07 000000591 INF: FPGA: Recv ZSGSRD 29145
17-03-18 02:21:40.015 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.015 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.015 -07 000000569 INF: FPGA: Recv ZSGSRD 29137
17-03-18 02:21:40.025 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.025 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.025 -07 000000618 INF: FPGA: Recv ZSGSRD 29140
17-03-18 02:21:40.035 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.035 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.035 -07 000000502 INF: FPGA: Recv ZSGSRD 29140
17-03-18 02:21:40.045 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.045 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.045 -07 000000606 INF: FPGA: Recv ZSGSRD 29135
17-03-18 02:21:40.055 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.055 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:40.055 -07 000000444 INF: FPGA: Recv ZPIEZORD 24673
17-03-18 02:21:40.065 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.065 -07 000000610 INF: Z Motor: Piezo is near 32.7 V (nominally 0 to 100 V), expect near 42.5 V, since DAC is at 4.250 V. Piezo Error = -9.8 V.
17-03-18 02:21:40.065 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -127.5 um, Read 10 ADC samples: Avg = 29138 (-126.7 uncal um), Error = 0.8 uncal um, Median = 29136 (-126.7 uncal um), StdDev = 5 (0.0 uncal um), Range = 16 (0.1 uncal um), Min = 29132 (-126.7 uncal um), Max = 29148 (-126.8 uncal um), Pos Noise = 10 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:40.065 -07 000000610 INF: Z Motor: ADC noise = 10, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29138, posNoise = 10, negNoise = 6
17-03-18 02:21:40.065 -07 000000610 INF: Z Motor: After move to -0.127507, error = -0.000005, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:40.065 -07 000000610 INF: Z Motor: Settle wait time = 1414 ms, measure time = 110 ms (allowed 150 ms), total time = 1524 ms
17-03-18 02:21:40.065 -07 000000610 INF: Z Motor: Waiting extra 40 ms after reading position to reach expected total of 150 ms
17-03-18 02:21:40.105 -07 000000610 INF: Y Motor: MoveYZ optimized (reads Z position after Y move and settle) took 1566 ms
17-03-18 02:21:40.105 -07 000000610 INF: Y Motor: Restored settling times back to 3000 or 1100 ms
17-03-18 02:21:40.105 -07 000000610 INF: ------------ Scan Snapping tile 19 at Y-position 74.83203125, Z-position -0.127512045397766. ----------
17-03-18 02:21:40.105 -07 000000610 INF: Cycle	98	Tile	19	Exposure Settings		A	394	G	189	T	189	C	394
17-03-18 02:21:40.105 -07 000000610 INF: Z Motor: Entering MoveAbsStepped (DAC = 27677, sync = True, waitForSettling = True)
17-03-18 02:21:40.105 -07 000000610 INF: Z Motor: Moving to -0.126697 mm, started at -0.127512 mm, distance = 0.81 um
17-03-18 02:21:40.105 -07 000000610 INF: FPGA: Xmit ZDACW 27677\n [Z Motor]
17-03-18 02:21:40.105 -07 000000430 INF: FPGA: Recv ZDACW
17-03-18 02:21:40.115 -07 000000610 INF: FPGA: 'ZDACW 27677' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:40.115 -07 000000610 INF: FPGA: Xmit ZDACR\n [Z Motor]
17-03-18 02:21:40.115 -07 000000618 INF: FPGA: Recv ZDACR 27677
17-03-18 02:21:40.125 -07 000000610 INF: FPGA: 'ZDACR' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.125 -07 000000610 INF: Z Motor: Waiting 150 ms for short move
17-03-18 02:21:40.275 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.275 -07 000000461 INF: FPGA: Recv ZSGSRD 29017
17-03-18 02:21:40.285 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 10 ms overall
17-03-18 02:21:40.285 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.285 -07 000000606 INF: FPGA: Recv ZSGSRD 29015
17-03-18 02:21:40.295 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.295 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.295 -07 000000444 INF: FPGA: Recv ZSGSRD 29007
17-03-18 02:21:40.305 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.305 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.305 -07 000000561 INF: FPGA: Recv ZSGSRD 29008
17-03-18 02:21:40.315 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.315 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.315 -07 000000626 INF: FPGA: Recv ZSGSRD 29017
17-03-18 02:21:40.325 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.325 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.325 -07 000000590 INF: FPGA: Recv ZSGSRD 29024
17-03-18 02:21:40.335 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.335 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.345 -07 000000501 INF: FPGA: Recv ZSGSRD 29007
17-03-18 02:21:40.345 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 2 ms overall
17-03-18 02:21:40.345 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.345 -07 000000591 INF: FPGA: Recv ZSGSRD 29009
17-03-18 02:21:40.355 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.355 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.355 -07 000000430 INF: FPGA: Recv ZSGSRD 29015
17-03-18 02:21:40.365 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.365 -07 000000610 INF: FPGA: Xmit ZSGSRD\n [Z Motor]
17-03-18 02:21:40.365 -07 000000579 INF: FPGA: Recv ZSGSRD 29012
17-03-18 02:21:40.375 -07 000000610 INF: FPGA: 'ZSGSRD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.375 -07 000000610 INF: FPGA: Xmit ZPIEZORD\n [Z Motor]
17-03-18 02:21:40.375 -07 000000461 INF: FPGA: Recv ZPIEZORD 24509
17-03-18 02:21:40.385 -07 000000610 INF: FPGA: 'ZPIEZORD' command took 0 ms to send, 0 ms to get response, and 9 ms overall
17-03-18 02:21:40.385 -07 000000610 INF: Z Motor: Piezo is near 32.4 V (nominally 0 to 100 V), expect near 42.2 V, since DAC is at 4.223 V. Piezo Error = -9.9 V.
17-03-18 02:21:40.385 -07 000000610 INF: Z Motor: ReadAdcAverage: Commanded Z = -126.7 um, Read 10 ADC samples: Avg = 29013 (-125.9 uncal um), Error = 0.8 uncal um, Median = 29014 (-125.9 uncal um), StdDev = 6 (0.0 uncal um), Range = 17 (0.1 uncal um), Min = 29007 (-125.9 uncal um), Max = 29024 (-126.0 uncal um), Pos Noise = 11 (0.1 uncal um), Neg Noise = 6 (0.0 uncal um)
17-03-18 02:21:40.385 -07 000000610 INF: Z Motor: ADC noise = 11, warning limit = 655, error limit = 3277, numSamples = 10x8, avg = 29013, posNoise = 11, negNoise = 6
17-03-18 02:21:40.385 -07 000000610 INF: Z Motor: After move to -0.126697, error = -0.000012, min/max error = -0.000831/0.000062, tolerance = 0.004001 mm
17-03-18 02:21:40.385 -07 000000610 INF: Z Motor: MoveAbsStepped took 274 ms)
17-03-18 02:21:40.385 -07 000000610 INF: GreenLED: Using Green data: Target power 180 mW --> 5964.0 mA drive current
17-03-18 02:21:40.385 -07 000000610 INF: RedLED: Using Red data: Target power 205 mW --> 1930.0 mA drive current
17-03-18 02:21:40.385 -07 000000591 INF: RedLED: Enabling LED using existing current: 1930 mA (862 DAC).
17-03-18 02:21:40.385 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger start.
17-03-18 02:21:40.385 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) start.
17-03-18 02:21:40.385 -07 000000626 INF: GreenLED: Enabling LED using existing current: 5964 mA (2663 DAC).
17-03-18 02:21:40.385 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger start.
17-03-18 02:21:40.385 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) start.
17-03-18 02:21:40.385 -07 000000606 INF: Camera: sBCa_GetPowerMode(785074288) end. Duration was 1 ms.
17-03-18 02:21:40.385 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) start.
17-03-18 02:21:40.385 -07 000000430 INF: Camera: sBCa_GetPowerMode(785074704) end. Duration was 1 ms.
17-03-18 02:21:40.385 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) start.
17-03-18 02:21:40.395 -07 000000606 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074288) end. Duration was 2 ms.
17-03-18 02:21:40.395 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) start.
17-03-18 02:21:40.395 -07 000000430 INF: Camera: sBCa_DisarmCaptureTwoImagesTriggered(785074704) end. Duration was 3 ms.
17-03-18 02:21:40.395 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) start.
17-03-18 02:21:40.405 -07 000000606 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074288, 255) end. Duration was 13 ms.
17-03-18 02:21:40.405 -07 000000606 INF: Disarm and arm camera sensor 0: TwoImagesTrigger end. Duration was 17 ms.
17-03-18 02:21:40.405 -07 000000430 INF: Camera: sBCa_ArmCaptureTwoImagesTriggered(785074704, 255) end. Duration was 13 ms.
17-03-18 02:21:40.405 -07 000000430 INF: Disarm and arm camera sensor 1: TwoImagesTrigger end. Duration was 19 ms.
17-03-18 02:21:40.405 -07 000000610 INF: FPGA: Xmit CAMDBLSNAP 394 394 189 189 27854 150\n [Camera]
17-03-18 02:21:40.605 -07 000000424 INF: FPGA: Recv @CAMDBLSNAP turning red on 192
17-03-18 02:21:41.005 -07 000000444 INF: FPGA: Recv @CAMDBLSNAP cam1 red img rdy 586
17-03-18 02:21:41.005 -07 000000005 INF: Reading out camIdx 0 ledIdx 0 channel image index 3 channel name C. Args Cmd: cam1 red img rdy 586
17-03-18 02:21:41.005 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:41.005 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:41.005 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) start.
17-03-18 02:21:41.005 -07 000000501 INF: FPGA: Recv @CAMDBLSNAP cam2 red img rdy 586
17-03-18 02:21:41.005 -07 000000005 INF: Reading out camIdx 1 ledIdx 0 channel image index 0 channel name A. Args Cmd: cam2 red img rdy 586
17-03-18 02:21:41.005 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:41.005 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:41.005 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) start.
17-03-18 02:21:41.195 -07 000000590 INF: FPGA: Recv @CAMDBLSNAP Zmove 150 ms 27854 779
17-03-18 02:21:41.345 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP turning grn on 932
17-03-18 02:21:41.395 -07 000000561 INF: Camera: sBCa_ReadImage(785074288, 2182910056, 0x0, 391868352) end. Duration was 389 ms.
17-03-18 02:21:41.395 -07 000000561 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 389 ms.
17-03-18 02:21:41.395 -07 000000561 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:41.395 -07 000000424 INF: Camera: sBCa_ReadImage(785074704, 2218332320, 0x0, 418435064) end. Duration was 385 ms.
17-03-18 02:21:41.395 -07 000000424 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 385 ms.
17-03-18 02:21:41.395 -07 000000424 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:41.395 -07 000000561 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:41.395 -07 000000561 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 394 ms.
17-03-18 02:21:41.395 -07 000000424 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:41.405 -07 000000424 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 397 ms.
17-03-18 02:21:41.475 -07 000000561 INF: FPGA: Recv @BUBEN2 C2 0 C1 0 R2 0 R1 0
17-03-18 02:21:41.475 -07 000000005 INF: Predictive Diagnostics Bubble Status: CyclesCompleted: 97. Bubbles during last 5000 ms interval: R1=0, R2=0, Total=0. Max bubbles per interval: R1=25, R2=22, Total=47. Bubbles this run: R1=1480, R2=1541, Total=3021. Warn if over 250 bubbles per interval.
17-03-18 02:21:41.535 -07 000000591 INF: FPGA: Recv @CAMDBLSNAP cam1 grn img rdy 1118
17-03-18 02:21:41.535 -07 000000005 INF: Reading out camIdx 0 ledIdx 1 channel image index 2 channel name T. Args Cmd: cam1 grn img rdy 1118
17-03-18 02:21:41.535 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. start.
17-03-18 02:21:41.655 -07 000000461 INF: FPGA: Recv @CAMDBLSNAP cam2 grn img rdy 1118
17-03-18 02:21:41.655 -07 000000005 INF: Reading out camIdx 1 ledIdx 1 channel image index 1 channel name G. Args Cmd: cam2 grn img rdy 1118
17-03-18 02:21:41.665 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. start.
17-03-18 02:21:41.665 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. start.
17-03-18 02:21:41.665 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) start.
17-03-18 02:21:41.665 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. start.
17-03-18 02:21:41.665 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) start.
17-03-18 02:21:41.725 -07 000000467 INF: FPGA: Recv @CAMDBLSNAP 1311
17-03-18 02:21:41.725 -07 000000618 INF: FPGA: Recv CAMDBLSNAP
17-03-18 02:21:41.725 -07 000000610 INF: FPGA: 'CAMDBLSNAP 394 394 189 189 27854 150' command took 2 ms to send, 1307 ms to get response, and 1318 ms overall
17-03-18 02:21:42.045 -07 000000502 INF: Camera: sBCa_ReadImage(785074288, 639799168, 0x0, 391868352) end. Duration was 375 ms.
17-03-18 02:21:42.045 -07 000000502 INF: Camera 1: ReadSquareImageHardwareTrigger (data transfer) from sensor 0. end. Duration was 376 ms.
17-03-18 02:21:42.045 -07 000000502 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:42.045 -07 000000455 INF: Camera: sBCa_ReadImage(785074704, 1077874736, 0x0, 418435064) end. Duration was 376 ms.
17-03-18 02:21:42.045 -07 000000455 INF: Camera 2: ReadSquareImageHardwareTrigger (data transfer) from sensor 1. end. Duration was 376 ms.
17-03-18 02:21:42.045 -07 000000455 INF: Camera: CopyActivePixFullImage start.
17-03-18 02:21:42.045 -07 000000502 INF: Camera: CopyActivePixFullImage end. Duration was 4 ms.
17-03-18 02:21:42.045 -07 000000502 INF: Camera 1: ReadSquareImage (data transfer) from sensor 0. end. Duration was 510 ms.
17-03-18 02:21:42.045 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) start.
17-03-18 02:21:42.045 -07 000000455 INF: Camera: CopyActivePixFullImage end. Duration was 3 ms.
17-03-18 02:21:42.055 -07 000000455 INF: Camera 2: ReadSquareImage (data transfer) from sensor 1. end. Duration was 393 ms.
17-03-18 02:21:42.085 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074288, 0) end. Duration was 42 ms.
17-03-18 02:21:42.085 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) start.
17-03-18 02:21:42.125 -07 000000610 INF: Camera: sBCa_SetPowerMode(785074704, 0) end. Duration was 41 ms.
17-03-18 02:21:42.145 -07 000000610 INF: Enabling Skipping AutoFocus in the next 0 cycles.
17-03-18 02:21:42.145 -07 000000610 INF: Imaging Cycle 98: ScanTilesCommand Cycle 98 time end. Duration was 139123 ms.
17-03-18 02:21:42.145 -07 000000610 INF: =================== Cycle #98 ===================
17-03-18 02:21:42.145 -07 000000610 INF: ===================  ===================
17-03-18 02:21:42.145 -07 000000561 INF: FPGA: Xmit EXLED1ADCR\n [GreenLED]
17-03-18 02:21:42.155 -07 000000579 INF: FPGA: Recv EXLED1ADCR 25
17-03-18 02:21:42.155 -07 000000561 INF: FPGA: 'EXLED1ADCR' command took 0 ms to send, 0 ms to get response, and 3 ms overall
17-03-18 02:21:42.155 -07 000000561 INF: GreenLED: Using Green data: Photodiode ADC 25 --> 0.0 mW (old method), or 1.8 mW (new method). Difference = 1.8 mW
17-03-18 02:21:42.155 -07 000000561 INF: Predictive Diagnostic Log Cycle Entry Metrics: RunId: 170317_M03814_0172_000000000-B2K79, InstrumentID: M03814, TotalCycles 158, CycleNumber: 98, FrontChillerTemperature: 4.015368, FrontChillerHeatSinkTemperature: 0.291347, AmbientTemperature: 18.75098, FlowCellCompartmentTemperature: 21.98965, FlowCellTargetTemperature: 22, FlowCellHeatSinkTemperature: 18.63512, GreenLEDSensorTemperature: 25.45569, PhotodiodePowerAdcGreen: 25, PhotodiodePowerMwGreen: 1.835864
17-03-18 02:21:42.235 -07 000000610 INF: Y-Drift Offset assigned 0.002126916.