Basic Statistics
Measure | Value |
---|---|
Filename | 1NF_31A_2.fq.gz |
File type | Conventional base calls |
Encoding | Illumina 1.5 |
Total Sequences | 3561574 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCACCGG | 14130 | 0.0 | 80.8554 | 8 |
CACCGGC | 14210 | 0.0 | 76.89879 | 9 |
CTTCACC | 15885 | 0.0 | 74.37493 | 6 |
CCTTCAC | 17575 | 0.0 | 69.760315 | 5 |
CGGGGCA | 1450 | 0.0 | 69.59869 | 94 |
GGCGCGC | 655 | 0.0 | 68.07896 | 6 |
GTGTGGC | 5815 | 0.0 | 67.966194 | 7 |
TTCACCG | 17620 | 0.0 | 67.07805 | 7 |
CGTAGTG | 2815 | 0.0 | 66.69791 | 4 |
CGGGCCC | 1070 | 0.0 | 65.80185 | 7 |
GGCCCGA | 1085 | 0.0 | 63.594307 | 9 |
TGTGGCA | 6415 | 0.0 | 60.950733 | 8 |
ACCTTCA | 7125 | 0.0 | 60.47674 | 4 |
GGGCCCG | 1155 | 0.0 | 60.146496 | 8 |
AGGCTGC | 55 | 1.3000317E-8 | 59.744297 | 2 |
AGGCGCG | 755 | 0.0 | 59.683586 | 5 |
TGTGTGG | 6195 | 0.0 | 58.644897 | 6 |
AACGGGC | 1200 | 0.0 | 57.499847 | 5 |
GCGCGCA | 790 | 0.0 | 57.03937 | 7 |
ATGTGTG | 5970 | 0.0 | 56.923923 | 5 |