Basic Statistics
Measure | Value |
---|---|
Filename | 1SN_25A_2.fq.gz |
File type | Conventional base calls |
Encoding | Illumina 1.5 |
Total Sequences | 3037089 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCACCGG | 11350 | 0.0 | 78.739944 | 8 |
CACCGGC | 11425 | 0.0 | 75.34721 | 9 |
CTTCACC | 12850 | 0.0 | 74.370155 | 6 |
CCTTCAC | 14230 | 0.0 | 70.91818 | 5 |
CGTAGTG | 3060 | 0.0 | 69.02639 | 4 |
GTGTGGC | 5220 | 0.0 | 68.24885 | 7 |
CAGCGTA | 1245 | 0.0 | 66.36959 | 1 |
TTCACCG | 14425 | 0.0 | 64.62305 | 7 |
GCCTTCA | 4555 | 0.0 | 64.095276 | 4 |
TGTGGCA | 5900 | 0.0 | 61.97399 | 8 |
CGGGGCA | 1120 | 0.0 | 61.60605 | 94 |
ACCTTCA | 5655 | 0.0 | 60.425854 | 4 |
TGTGTGG | 5755 | 0.0 | 58.56028 | 6 |
GCAGCCA | 105 | 0.0 | 58.11747 | 2 |
GCGTAGT | 1935 | 0.0 | 57.73246 | 3 |
ATGCAGC | 90 | 0.0 | 57.372375 | 2 |
GGGCCCG | 795 | 0.0 | 57.27019 | 8 |
GCAGCCC | 100 | 0.0 | 56.32553 | 4 |
CGGGCCC | 810 | 0.0 | 56.209633 | 7 |
TAGTGTG | 3255 | 0.0 | 55.8064 | 6 |