>|> 20250614 16:18:55.830 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Start >|> 20250614 16:18:55.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- /opt/pacbio/pa-smrt-basecaller-13.0.0/bin/baz2bam --filelist /data/nrta/1/m84082_250614_081210_s3/pb_internal/m84082_250614_081210_s3.bazfilelist.txt --logoutput /data/icc/m84082_250614_081210_s3/metadata/m84082_250614_081210_s3_basic_preview_4hr.baz2bam.log --kestrel-files-layout --metadata /data/icc/m84082_250614_081210_s3/metadata/m84082_250614_081210_s3_basic_preview_4hr.metadata.xml -j 24 -b 8 --uuid d229ab8f-3c9d-4271-a38b-93ae0c0cf395 --inlinePbi --statusfd=2 --silent --bazThreads 6 --maxInputQueueMB 7000 --zmwBatchMB 500 --zmwHeaderBatchMB 10 --maxOutputQueueMB 10000 --defaultZmwBatchSize 75 --enableBarcodedAdapters=False --samplePercent 0.4 --fileListStride 4 --startFileListIdx 0 --streamedBam -o m84082_250614_081210_s3_basic_preview_4hr >|> 20250614 16:18:55.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- commit hash: 664e9a3f3e1bb4eac405607fd1fd4bd1485c1cd8-dirty >|> 20250614 16:18:55.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- commit date: 2024-09-24 09:52:04 +0200 >|> 20250614 16:18:55.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Version: release/kestrel-13.3_664e9a3f3e1bb4eac405607fd1fd4bd1485c1cd8-dirty >|> 20250614 16:18:55.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Roughly processing the first 2147483647 ZMWs, up to a slice boundary... >|> 20250614 16:18:55.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Processing the first 0.4% ZMWs of each BAZ file >|> 20250614 16:19:01.043 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Processing the first 0.4% ZMWs of each BAZ file >|> 20250614 16:19:06.106 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Processing the first 0.4% ZMWs of each BAZ file >|> 20250614 16:19:11.122 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Processing the first 0.4% ZMWs of each BAZ file >|> 20250614 16:19:16.392 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Processing the first 0.4% ZMWs of each BAZ file >|> 20250614 16:19:21.438 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Processing the first 0.4% ZMWs of each BAZ file >|> 20250614 16:19:28.255 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Parsing /data/icc/m84082_250614_081210_s3/metadata/m84082_250614_081210_s3_basic_preview_4hr.metadata.xml >|> 20250614 16:19:28.260 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PPAAlgoConfig = {"adapterFinding":{"disableAdapterFinding":false,"leftAdapter":"CAACAACAACAACGGAGGAGGAGGAAAAG","rightAdapter":"CAACAACAACAACGGAGGAGGAGGAAAAG"},"controlFilter":{"disableControlFiltering":false,"leftAdapter":"TAGAGAGAGAAAAGGAGGAGGAGGCAACAACAACAACTCTCTCTA","rightAdapter":"TAGAGAGAGAAAAGGAGGAGGAGGCAACAACAACAACTCTCTCTA","sequence":"TCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCCTGGCCGCATCCAGACTCAAATCAACGACCAGATCGCCTACCGGTTCAGCCATACCGGACTCCTCCTGCGATCCCTTCTGATACTGTCATCAGCATTACGTCATCCTCCGTCATGTCCGCCACATCCGGGGAAGCGGGGATAACTTCATTCCCGTCCGGGCCAAAGCGGACACCTCCGGCAAGCCCTGCCGCTTTCTGCAGCAGGCTCGCCAGCAGCGCACTGAGATCCAGCTGCCAGCGGGAAATACTGATGCGCAGCGCCGCCAGCGCATAAACGAAGCAGTCGAGTGCCTCATTGCGTCGCTTTTTGCTGTCCCACAGTATTTTTTTCCTGCCATCCACCCATTTTTCGACCTGCTCTTCAGCAGTCAGCTGCTGCGCTTCGGTCAGATCAAAAATAGGGTACCGAGCTCGAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTA"},"hqrf":{"method":"N2"},"inputFilter":{"minSnr":1.5},"outputFilter":{"zmwOutputStride":1}} >|> 20250614 16:19:28.521 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- 24 adapter callers have been configured with the standard method >|> 20250614 16:19:28.522 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Created BAM Header comment:{ "collection_metadata_xml" : "", "dataset_uuid" : "ea368156-7d09-425d-9228-52a09dc68d5a", "external_resources" : [ { "file_name" : "../metadata/m84082_250614_081210_s3_basic_preview_4hr.sts.xml", "meta_type" : "PacBio.SubreadFile.ChipStatsFile" } ], "name" : "baz2bam_ccs_sideband", "subreadset_name" : "AS-266_Goetz-Pool1_HiFi_300pM-Cell3", "version" : "1.2", "zmws" : 25176 } >|> 20250614 16:19:28.522 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- bam file: - >|> 20250614 16:19:28.522 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- bamThreads = 8 >|> 20250614 16:19:28.522 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Writing streaming BAM file to stdout >|> 20250614 16:19:28.535 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- ZOFFSET_CART_HMM configured >|> 20250614 16:19:28.535 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Creating sts.h5 file pb_internal/m84082_250614_081210_s3_basic_preview_4hr.sts.h5 with parameters numHoles:25176 numAnalogs:4 numFilters:1 >|> 20250614 16:19:28.539 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Starting Baz2bam. MovieName: /data/nrta/1/m84082_250614_081210_s3/pb_internal/m84082_250614_081210_s3.0.baz, BaseCallerVersion: 5.0, BazWriterVersion: 0.0.0, BazVersion: 2.6.1, OutputPrefix: m84082_250614_081210_s3_basic_preview_4hr, ProdFileLayout: Kestrel, Baz2bamVersion: release/kestrel-13.3_664e9a3f3e1bb4eac405607fd1fd4bd1485c1cd8-dirty >|> 20250614 16:19:28.539 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Spawn 24 workers >|> 20250614 16:19:28.782 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Beginning read of next slice >|> 20250614 16:19:28.782 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Beginning read of next slice >|> 20250614 16:19:28.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- OOM score went from -1 to 672 >|> 20250614 16:19:28.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Beginning read of next slice >|> 20250614 16:19:28.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Beginning read of next slice >|> 20250614 16:19:28.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Beginning read of next slice >|> 20250614 16:19:28.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Beginning read of next slice >|> 20250614 16:19:28.796 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Skipping to end of BAZ file. >|> 20250614 16:19:28.838 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Finished read of next slice >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- ---------------------------------------------------------- >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Full: 0.00e+00 +- 0.00e+00, [ 5.58e+01 ] >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- TOTAL: 1.04e-03 +- 0.00e+00, [ 1.04e-03 ] >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- READ_DATA: 5.52e+01 +- 0.00e+00, [ 5.52e+01 ] >|> 20250614 16:19:28.838 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- SEND_DATA: 6.49e-02 +- 0.00e+00, [ 6.49e-02 ] >|> 20250614 16:19:28.838 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Beginning read of next slice >|> 20250614 16:19:28.843 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122711 -|- Marking all ZMWs as sequencing, Kestrel does not yet have a replacement for Sequel layout >|> 20250614 16:19:28.843 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122732 -|- ZmwStats not setting hole type >|> 20250614 16:19:28.857 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122709 -|- Scaterring Metrology disabled in ChipStats, Kestrel does not yet have a replacement for Sequel layout >|> 20250614 16:19:29.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.041666 >|> 20250614 16:19:30.501 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Skipping to end of BAZ file. >|> 20250614 16:19:30.536 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Skipping to end of BAZ file. >|> 20250614 16:19:30.552 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Skipping to end of BAZ file. >|> 20250614 16:19:30.553 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Skipping to end of BAZ file. >|> 20250614 16:19:30.555 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Skipping to end of BAZ file. >|> 20250614 16:19:30.555 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Finished read of next slice >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- ---------------------------------------------------------- >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Full: 0.00e+00 +- 0.00e+00, [ 1.77e+03 ] >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- TOTAL: 9.77e-04 +- 0.00e+00, [ 9.77e-04 ] >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- READ_DATA: 1.77e+03 +- 0.00e+00, [ 1.77e+03 ] >|> 20250614 16:19:30.555 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- SEND_DATA: 6.81e-02 +- 0.00e+00, [ 6.81e-02 ] >|> 20250614 16:19:30.555 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Beginning read of next slice >|> 20250614 16:19:30.556 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Skipping to end of BAZ file. >|> 20250614 16:19:30.557 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122724 -|- QualityValues not currently supported >|> 20250614 16:19:30.581 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Finished read of next slice >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- ---------------------------------------------------------- >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Full: 0.00e+00 +- 0.00e+00, [ 1.80e+03 ] >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- TOTAL: 1.10e-03 +- 0.00e+00, [ 1.10e-03 ] >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- READ_DATA: 1.80e+03 +- 0.00e+00, [ 1.80e+03 ] >|> 20250614 16:19:30.581 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- SEND_DATA: 7.65e-02 +- 0.00e+00, [ 7.65e-02 ] >|> 20250614 16:19:30.581 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Beginning read of next slice >|> 20250614 16:19:30.609 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Finished read of next slice >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- ---------------------------------------------------------- >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Full: 0.00e+00 +- 0.00e+00, [ 1.83e+03 ] >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- TOTAL: 1.34e-03 +- 0.00e+00, [ 1.34e-03 ] >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- READ_DATA: 1.83e+03 +- 0.00e+00, [ 1.83e+03 ] >|> 20250614 16:19:30.609 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- SEND_DATA: 5.04e-02 +- 0.00e+00, [ 5.04e-02 ] >|> 20250614 16:19:30.609 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Beginning read of next slice >|> 20250614 16:19:30.611 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Finished read of next slice >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- ---------------------------------------------------------- >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Full: 0.00e+00 +- 0.00e+00, [ 1.83e+03 ] >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- TOTAL: 7.32e-04 +- 0.00e+00, [ 7.32e-04 ] >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- READ_DATA: 1.83e+03 +- 0.00e+00, [ 1.83e+03 ] >|> 20250614 16:19:30.611 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- SEND_DATA: 4.59e-02 +- 0.00e+00, [ 4.59e-02 ] >|> 20250614 16:19:30.611 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Beginning read of next slice >|> 20250614 16:19:30.612 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Finished read of next slice >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- ---------------------------------------------------------- >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Full: 0.00e+00 +- 0.00e+00, [ 1.83e+03 ] >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- TOTAL: 9.77e-04 +- 0.00e+00, [ 9.77e-04 ] >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- READ_DATA: 1.83e+03 +- 0.00e+00, [ 1.83e+03 ] >|> 20250614 16:19:30.612 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- SEND_DATA: 4.68e-02 +- 0.00e+00, [ 4.68e-02 ] >|> 20250614 16:19:30.612 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Beginning read of next slice >|> 20250614 16:19:30.614 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Finished read of next slice >|> 20250614 16:19:30.614 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:30.614 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:30.614 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:30.615 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- ---------------------------------------------------------- >|> 20250614 16:19:30.615 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Full: 5.58e+01 +- 0.00e+00, [ 1.78e+03 ] >|> 20250614 16:19:30.615 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- TOTAL: 6.43e-04 +- 5.64e-04, [ 2.44e-04 ] >|> 20250614 16:19:30.615 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- READ_DATA: 9.16e+02 +- 1.22e+03, [ 1.78e+03 ] >|> 20250614 16:19:30.615 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- SEND_DATA: 5.69e-02 +- 1.14e-02, [ 4.88e-02 ] >|> 20250614 16:19:30.615 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Beginning read of next slice >|> 20250614 16:19:30.783 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.059540 >|> 20250614 16:19:31.784 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.211429 >|> 20250614 16:19:32.784 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.291664 >|> 20250614 16:19:33.671 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Skipping to end of BAZ file. >|> 20250614 16:19:33.963 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Skipping to end of BAZ file. >|> 20250614 16:19:33.969 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Finished read of next slice >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- ---------------------------------------------------------- >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Full: 1.80e+03 +- 0.00e+00, [ 3.39e+03 ] >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- TOTAL: 7.93e-04 +- 4.32e-04, [ 4.88e-04 ] >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- READ_DATA: 2.59e+03 +- 1.12e+03, [ 3.39e+03 ] >|> 20250614 16:19:33.970 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- SEND_DATA: 6.79e-02 +- 1.22e-02, [ 5.92e-02 ] >|> 20250614 16:19:33.970 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Beginning read of next slice >|> 20250614 16:19:33.988 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Skipping to end of BAZ file. >|> 20250614 16:19:34.041 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Skipping to end of BAZ file. >|> 20250614 16:19:34.180 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Finished read of next slice >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- ---------------------------------------------------------- >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Full: 1.83e+03 +- 0.00e+00, [ 3.57e+03 ] >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- TOTAL: 4.88e-04 +- 3.45e-04, [ 2.44e-04 ] >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- READ_DATA: 2.70e+03 +- 1.23e+03, [ 3.57e+03 ] >|> 20250614 16:19:34.180 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- SEND_DATA: 5.71e-02 +- 1.58e-02, [ 6.83e-02 ] >|> 20250614 16:19:34.180 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Beginning read of next slice >|> 20250614 16:19:34.193 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Finished read of next slice >|> 20250614 16:19:34.194 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Beginning read of next slice >|> 20250614 16:19:34.618 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Skipping to end of BAZ file. >|> 20250614 16:19:34.808 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.398828 >|> 20250614 16:19:34.944 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Finished read of next slice >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- ---------------------------------------------------------- >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Full: 1.83e+03 +- 0.00e+00, [ 4.33e+03 ] >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- TOTAL: 9.16e-04 +- 6.04e-04, [ 4.88e-04 ] >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- READ_DATA: 3.08e+03 +- 1.77e+03, [ 4.33e+03 ] >|> 20250614 16:19:34.944 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- SEND_DATA: 5.62e-02 +- 8.22e-03, [ 6.20e-02 ] >|> 20250614 16:19:34.944 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Beginning read of next slice >|> 20250614 16:19:34.946 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Skipping to end of BAZ file. >|> 20250614 16:19:35.090 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Finished read of next slice >|> 20250614 16:19:35.090 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:35.090 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:35.090 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:35.090 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- ---------------------------------------------------------- >|> 20250614 16:19:35.090 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Full: 1.83e+03 +- 0.00e+00, [ 4.48e+03 ] >|> 20250614 16:19:35.091 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- TOTAL: 4.88e-04 +- 6.91e-04, [ 0.00e+00 ] >|> 20250614 16:19:35.091 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- READ_DATA: 3.15e+03 +- 1.87e+03, [ 4.48e+03 ] >|> 20250614 16:19:35.091 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- SEND_DATA: 5.81e-02 +- 1.60e-02, [ 6.94e-02 ] >|> 20250614 16:19:35.091 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Beginning read of next slice >|> 20250614 16:19:35.809 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.479182 >|> 20250614 16:19:36.266 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Finished read of next slice >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Anomalous profiling event (reported in ms): >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- ---------------------------------------------------------- >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Full: 1.77e+03 +- 0.00e+00, [ 5.71e+03 ] >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- TOTAL: 7.32e-04 +- 3.45e-04, [ 4.88e-04 ] >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- READ_DATA: 3.74e+03 +- 2.78e+03, [ 5.71e+03 ] >|> 20250614 16:19:36.266 -|- WARN -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- SEND_DATA: 6.63e-02 +- 2.59e-03, [ 6.44e-02 ] >|> 20250614 16:19:36.266 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Beginning read of next slice >|> 20250614 16:19:36.360 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Skipping to end of BAZ file. >|> 20250614 16:19:36.397 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Finished read of next slice >|> 20250614 16:19:36.398 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Beginning read of next slice >|> 20250614 16:19:36.812 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.544640 >|> 20250614 16:19:37.301 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Skipping to end of BAZ file. >|> 20250614 16:19:37.331 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Finished read of next slice >|> 20250614 16:19:37.331 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Beginning read of next slice >|> 20250614 16:19:37.816 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.622015 >|> 20250614 16:19:38.130 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Skipping to end of BAZ file. >|> 20250614 16:19:38.167 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Finished read of next slice >|> 20250614 16:19:38.167 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Beginning read of next slice >|> 20250614 16:19:38.192 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Skipping to end of BAZ file. >|> 20250614 16:19:38.204 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122736 -|- Finished read of next slice >|> 20250614 16:19:38.820 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.705347 >|> 20250614 16:19:38.880 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Skipping to end of BAZ file. >|> 20250614 16:19:39.137 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Skipping to end of BAZ file. >|> 20250614 16:19:39.195 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Finished read of next slice >|> 20250614 16:19:39.195 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Beginning read of next slice >|> 20250614 16:19:39.273 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Skipping to end of BAZ file. >|> 20250614 16:19:39.274 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122738 -|- Finished read of next slice >|> 20250614 16:19:39.330 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Skipping to end of BAZ file. >|> 20250614 16:19:39.331 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122740 -|- Finished read of next slice >|> 20250614 16:19:39.821 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.758929 >|> 20250614 16:19:40.312 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Finished read of next slice >|> 20250614 16:19:40.313 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Beginning read of next slice >|> 20250614 16:19:40.824 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.851159 >|> 20250614 16:19:41.229 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Skipping to end of BAZ file. >|> 20250614 16:19:41.230 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122737 -|- Finished read of next slice >|> 20250614 16:19:41.385 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Skipping to end of BAZ file. >|> 20250614 16:19:41.386 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122739 -|- Finished read of next slice >|> 20250614 16:19:41.828 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.934531 >|> 20250614 16:19:42.541 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Skipping to end of BAZ file. >|> 20250614 16:19:42.542 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122741 -|- Finished read of next slice >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Final Performance Profiling Results for READ_PROFILES: (reported in milliseconds) >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: Gathered 24 samples. >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: % Compute, FullMean/OutlierMean FullDev/OutlierDev >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: Full Execution -- 2.89e+03 / 2.70e+03, 1.08e+03 / 1.03e+03 >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 0.00%, TOTAL -- 4.91e-04 / 6.77e-04, 3.05e-04 / 3.17e-04 >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 99.99%, READ_DATA -- 2.89e+03 / 2.70e+03, 1.08e+03 / 1.03e+03 >|> 20250614 16:19:42.597 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 0.00%, SEND_DATA -- 6.09e-02 / 6.04e-02, 9.75e-03 / 7.63e-03 >|> 20250614 16:19:42.829 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122735 -|- Sending progress 0.999990 >|> 20250614 16:19:42.851 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Closing BAM files >|> 20250614 16:19:42.851 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Writing PBI files >|> 20250614 16:19:43.852 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Corrected missing adapter (>35% per ZMW) in 91 ZMWs, 1.04935% of 8672 total ZMWs with adapters >|> 20250614 16:19:43.852 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Corrected missed adapter (<=35% per ZMW) in 380 ZMWs, 4.38192% of 8672 total ZMWs with adapters >|> 20250614 16:19:43.852 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Corrected adapters in 471 ZMWs, 5.43127% of 8672 total ZMWs with adapters >|> 20250614 16:19:43.852 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Adapter Correction imputed 643 of 29059 total adapters (2.21274%) >|> 20250614 16:19:43.852 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Opening file metadata/m84082_250614_081210_s3_basic_preview_4hr.sts.xml.tmp >|> 20250614 16:19:43.904 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Renaming file metadata/m84082_250614_081210_s3_basic_preview_4hr.sts.xml.tmp -> metadata/m84082_250614_081210_s3_basic_preview_4hr.sts.xml >|> 20250614 16:19:43.915 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- BAM files closed and PBIs written >|> 20250614 16:19:43.915 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Closing sts.h5 file >|> 20250614 16:19:43.917 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- sts.h5 file closed and written >|> 20250614 16:19:43.917 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Closing logging >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Logging closed >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:124027 -|- Finished ZMW processing 25176 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Finished >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Final Performance Profiling Results for COMPUTE_PROFILES: (reported in milliseconds) >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: Gathered 17072 samples. >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: % Compute, FullMean/OutlierMean FullDev/OutlierDev >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: Full Execution -- 1.97e+01 / 4.16e+02, 6.39e+01 / 1.82e+02 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 59.50%, DATA_WAIT -- 1.17e+01 / 5.42e-01, 4.43e+00 / 1.63e+00 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 0.03%, DATA_MOVE -- 2.47e-01 / 2.61e-01, 1.67e+00 / 2.00e-03 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 0.01%, DATA_SEND -- 8.49e-02 / 4.24e-02, 5.14e-01 / 1.19e-02 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 5.27%, PARSE_BINARY -- 7.05e-01 / 7.72e-01, 2.62e+00 / 2.17e+00 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 1.97%, PROCESS_PACKETS -- 2.64e-01 / 2.36e-01, 1.56e+00 / 9.65e-01 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 3.64%, FIND_HQRF -- 4.86e-01 / 4.16e-01, 4.17e+00 / 1.56e+00 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 4.01%, FIND_INSERTS -- 5.36e-01 / 5.90e-01, 2.09e+00 / 2.00e+00 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 0.03%, PROD_STATS -- 4.41e-03 / 2.44e-03, 1.39e-01 / 2.12e-03 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 20.72%, FIND_SUBREAD -- 2.77e+00 / 2.92e+00, 7.23e+00 / 5.64e+00 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 3.97%, ZMW_STATS -- 5.31e-01 / 5.27e-01, 2.11e+00 / 1.70e+00 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- PerfReport: 0.85%, FINALIZE -- 1.13e-01 / 6.97e-02, 1.41e+00 / 8.30e-01 >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- joining thread pool >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- joining loggingThread_ >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- joining done >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Peak RSS : 4.534 GiB >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- ~ConvertBaz2BamDestroyed >|> 20250614 16:19:44.831 -|- INFO -|- PBLogger -|- nrta-84082|P:122636|T:122636 -|- Remap Stats: shiftedHqRegionStart = 13573 noStartOnLabelTransition = 0 noEndOnLabelTransition = 0