>|> 20251002 12:03:14.695 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Start >|> 20251002 12:03:14.695 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- /opt/pacbio/pa-smrt-basecaller-13.0.0/bin/baz2bam --filelist /data/nrtb/0/m84082_251001_025627_s2/pb_internal/m84082_251001_025627_s2.bazfilelist.txt --logoutput /data/icc/m84082_251001_025627_s2/metadata/m84082_251001_025627_s2_full_preview_29hr.baz2bam.log --kestrel-files-layout --metadata /data/icc/m84082_251001_025627_s2/metadata/m84082_251001_025627_s2_full_preview_29hr.metadata.xml -j 24 -b 8 --uuid 5c1a38f8-1e66-4c26-ab16-6443d10d8ae0 --inlinePbi --statusfd=2 --silent --bazThreads 6 --maxInputQueueMB 7000 --zmwBatchMB 500 --zmwHeaderBatchMB 10 --maxOutputQueueMB 10000 --defaultZmwBatchSize 75 --enableBarcodedAdapters=False --samplePercent 0.04 --fileListStride 4 --startFileListIdx 0 --streamedBam -o m84082_251001_025627_s2_full_preview_29hr >|> 20251002 12:03:14.695 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- commit hash: 664e9a3f3e1bb4eac405607fd1fd4bd1485c1cd8-dirty >|> 20251002 12:03:14.695 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- commit date: 2024-09-24 09:52:04 +0200 >|> 20251002 12:03:14.695 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Version: release/kestrel-13.3_664e9a3f3e1bb4eac405607fd1fd4bd1485c1cd8-dirty >|> 20251002 12:03:14.696 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Roughly processing the first 2147483647 ZMWs, up to a slice boundary... >|> 20251002 12:03:14.696 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Processing the first 0.04% ZMWs of each BAZ file >|> 20251002 12:03:20.538 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Processing the first 0.04% ZMWs of each BAZ file >|> 20251002 12:03:26.433 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Processing the first 0.04% ZMWs of each BAZ file >|> 20251002 12:03:32.608 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Processing the first 0.04% ZMWs of each BAZ file >|> 20251002 12:03:38.609 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Processing the first 0.04% ZMWs of each BAZ file >|> 20251002 12:03:44.510 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Processing the first 0.04% ZMWs of each BAZ file >|> 20251002 12:03:52.415 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Parsing /data/icc/m84082_251001_025627_s2/metadata/m84082_251001_025627_s2_full_preview_29hr.metadata.xml >|> 20251002 12:03:52.426 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PPAAlgoConfig = {"adapterFinding":{"disableAdapterFinding":false,"leftAdapter":"CAACAACAACAACGGAGGAGGAGGAAAAG","rightAdapter":"CAACAACAACAACGGAGGAGGAGGAAAAG"},"controlFilter":{"disableControlFiltering":false,"leftAdapter":"TAGAGAGAGAAAAGGAGGAGGAGGCAACAACAACAACTCTCTCTA","rightAdapter":"TAGAGAGAGAAAAGGAGGAGGAGGCAACAACAACAACTCTCTCTA","sequence":"TCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTGTGTGGAATTGTGAGCGGATAACAATTTCACACAGGAAACAGCTATGACCATGATTACGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCCTGGCCGCATCCAGACTCAAATCAACGACCAGATCGCCTACCGGTTCAGCCATACCGGACTCCTCCTGCGATCCCTTCTGATACTGTCATCAGCATTACGTCATCCTCCGTCATGTCCGCCACATCCGGGGAAGCGGGGATAACTTCATTCCCGTCCGGGCCAAAGCGGACACCTCCGGCAAGCCCTGCCGCTTTCTGCAGCAGGCTCGCCAGCAGCGCACTGAGATCCAGCTGCCAGCGGGAAATACTGATGCGCAGCGCCGCCAGCGCATAAACGAAGCAGTCGAGTGCCTCATTGCGTCGCTTTTTGCTGTCCCACAGTATTTTTTTCCTGCCATCCACCCATTTTTCGACCTGCTCTTCAGCAGTCAGCTGCTGCGCTTCGGTCAGATCAAAAATAGGGTACCGAGCTCGAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCCTGATGCGGTATTTTCTCCTTA"},"hqrf":{"method":"N2"},"inputFilter":{"minSnr":1.5},"outputFilter":{"zmwOutputStride":1}} >|> 20251002 12:03:52.686 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- 24 adapter callers have been configured with the standard method >|> 20251002 12:03:52.688 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Created BAM Header comment:{ "collection_metadata_xml" : "", "dataset_uuid" : "db0f4407-9c8a-4ad7-a9a4-4929b50de503", "external_resources" : [ { "file_name" : "../metadata/m84082_251001_025627_s2_full_preview_29hr.sts.xml", "meta_type" : "PacBio.SubreadFile.ChipStatsFile" } ], "name" : "baz2bam_ccs_sideband", "subreadset_name" : "AS-306_Goetz-Pool3_FA253-FA092_Amplicon_300pM-Cell2", "version" : "1.2", "zmws" : 2520 } >|> 20251002 12:03:52.688 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- bam file: - >|> 20251002 12:03:52.688 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- bamThreads = 8 >|> 20251002 12:03:52.688 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Writing streaming BAM file to stdout >|> 20251002 12:03:52.702 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- ZOFFSET_CART_HMM configured >|> 20251002 12:03:52.702 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Creating sts.h5 file pb_internal/m84082_251001_025627_s2_full_preview_29hr.sts.h5 with parameters numHoles:2520 numAnalogs:4 numFilters:1 >|> 20251002 12:03:52.708 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Starting Baz2bam. MovieName: /data/nrtb/0/m84082_251001_025627_s2/pb_internal/m84082_251001_025627_s2.0.baz, BaseCallerVersion: 5.0, BazWriterVersion: 0.0.0, BazVersion: 2.6.1, OutputPrefix: m84082_251001_025627_s2_full_preview_29hr, ProdFileLayout: Kestrel, Baz2bamVersion: release/kestrel-13.3_664e9a3f3e1bb4eac405607fd1fd4bd1485c1cd8-dirty >|> 20251002 12:03:52.708 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Spawn 24 workers >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Beginning read of next slice >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Beginning read of next slice >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- OOM score went from -1 to 677 >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Beginning read of next slice >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Beginning read of next slice >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Beginning read of next slice >|> 20251002 12:03:52.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Beginning read of next slice >|> 20251002 12:03:52.962 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Skipping to end of BAZ file. >|> 20251002 12:03:53.442 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Finished read of next slice >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- ---------------------------------------------------------- >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Full: 0.00e+00 +- 0.00e+00, [ 4.91e+02 ] >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- TOTAL: 8.85e-04 +- 0.00e+00, [ 8.85e-04 ] >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- READ_DATA: 4.91e+02 +- 0.00e+00, [ 4.91e+02 ] >|> 20251002 12:03:53.442 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- SEND_DATA: 2.00e-02 +- 0.00e+00, [ 2.00e-02 ] >|> 20251002 12:03:53.442 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Beginning read of next slice >|> 20251002 12:03:53.445 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103911 -|- Marking all ZMWs as sequencing, Kestrel does not yet have a replacement for Sequel layout >|> 20251002 12:03:53.445 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103911 -|- ZmwStats not setting hole type >|> 20251002 12:03:53.446 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103907 -|- Scaterring Metrology disabled in ChipStats, Kestrel does not yet have a replacement for Sequel layout >|> 20251002 12:03:53.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- OOM score went from 677 to 680 >|> 20251002 12:03:53.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.041666 >|> 20251002 12:03:55.468 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Skipping to end of BAZ file. >|> 20251002 12:03:55.472 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Skipping to end of BAZ file. >|> 20251002 12:03:55.483 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Skipping to end of BAZ file. >|> 20251002 12:03:55.574 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Skipping to end of BAZ file. >|> 20251002 12:03:55.733 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Skipping to end of BAZ file. >|> 20251002 12:03:55.864 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Finished read of next slice >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- ---------------------------------------------------------- >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Full: 0.00e+00 +- 0.00e+00, [ 2.91e+03 ] >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- TOTAL: 4.88e-04 +- 0.00e+00, [ 4.88e-04 ] >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- READ_DATA: 2.91e+03 +- 0.00e+00, [ 2.91e+03 ] >|> 20251002 12:03:55.864 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- SEND_DATA: 2.06e-02 +- 0.00e+00, [ 2.06e-02 ] >|> 20251002 12:03:55.864 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Beginning read of next slice >|> 20251002 12:03:55.876 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Finished read of next slice >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- ---------------------------------------------------------- >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Full: 0.00e+00 +- 0.00e+00, [ 2.92e+03 ] >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- TOTAL: 1.46e-03 +- 0.00e+00, [ 1.46e-03 ] >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- READ_DATA: 2.92e+03 +- 0.00e+00, [ 2.92e+03 ] >|> 20251002 12:03:55.876 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- SEND_DATA: 2.03e-02 +- 0.00e+00, [ 2.03e-02 ] >|> 20251002 12:03:55.876 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Beginning read of next slice >|> 20251002 12:03:55.879 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Finished read of next slice >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- ---------------------------------------------------------- >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Full: 0.00e+00 +- 0.00e+00, [ 2.93e+03 ] >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- TOTAL: 1.22e-03 +- 0.00e+00, [ 1.22e-03 ] >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- READ_DATA: 2.93e+03 +- 0.00e+00, [ 2.93e+03 ] >|> 20251002 12:03:55.880 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- SEND_DATA: 1.53e-02 +- 0.00e+00, [ 1.53e-02 ] >|> 20251002 12:03:55.880 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Beginning read of next slice >|> 20251002 12:03:55.886 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103930 -|- QualityValues not currently supported >|> 20251002 12:03:55.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Finished read of next slice >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- ---------------------------------------------------------- >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Full: 0.00e+00 +- 0.00e+00, [ 3.00e+03 ] >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- TOTAL: 2.93e-03 +- 0.00e+00, [ 2.93e-03 ] >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- READ_DATA: 3.00e+03 +- 0.00e+00, [ 3.00e+03 ] >|> 20251002 12:03:55.952 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- SEND_DATA: 1.80e-02 +- 0.00e+00, [ 1.80e-02 ] >|> 20251002 12:03:55.952 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Beginning read of next slice >|> 20251002 12:03:56.082 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Finished read of next slice >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- ---------------------------------------------------------- >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Full: 0.00e+00 +- 0.00e+00, [ 3.13e+03 ] >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- TOTAL: 1.46e-03 +- 0.00e+00, [ 1.46e-03 ] >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- READ_DATA: 3.13e+03 +- 0.00e+00, [ 3.13e+03 ] >|> 20251002 12:03:56.082 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- SEND_DATA: 1.59e-02 +- 0.00e+00, [ 1.59e-02 ] >|> 20251002 12:03:56.082 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Beginning read of next slice >|> 20251002 12:03:56.199 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Skipping to end of BAZ file. >|> 20251002 12:03:56.688 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Finished read of next slice >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- ---------------------------------------------------------- >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Full: 4.91e+02 +- 0.00e+00, [ 3.25e+03 ] >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- TOTAL: 6.87e-04 +- 2.81e-04, [ 4.88e-04 ] >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- READ_DATA: 1.87e+03 +- 1.95e+03, [ 3.25e+03 ] >|> 20251002 12:03:56.688 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- SEND_DATA: 1.92e-02 +- 1.07e-03, [ 1.85e-02 ] >|> 20251002 12:03:56.688 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Beginning read of next slice >|> 20251002 12:03:56.697 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Skipping to end of BAZ file. >|> 20251002 12:03:56.953 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.095237 >|> 20251002 12:03:57.414 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Finished read of next slice >|> 20251002 12:03:57.415 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Beginning read of next slice >|> 20251002 12:03:57.954 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.333330 >|> 20251002 12:03:58.885 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Skipping to end of BAZ file. >|> 20251002 12:03:59.149 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Skipping to end of BAZ file. >|> 20251002 12:03:59.637 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Finished read of next slice >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- ---------------------------------------------------------- >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Full: 2.93e+03 +- 0.00e+00, [ 3.76e+03 ] >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- TOTAL: 7.32e-04 +- 6.91e-04, [ 2.44e-04 ] >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- READ_DATA: 3.34e+03 +- 5.87e+02, [ 3.76e+03 ] >|> 20251002 12:03:59.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- SEND_DATA: 1.71e-02 +- 2.55e-03, [ 1.89e-02 ] >|> 20251002 12:03:59.637 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Beginning read of next slice >|> 20251002 12:03:59.677 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Skipping to end of BAZ file. >|> 20251002 12:03:59.926 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Skipping to end of BAZ file. >|> 20251002 12:04:00.120 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Finished read of next slice >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- ---------------------------------------------------------- >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Full: 2.91e+03 +- 0.00e+00, [ 4.26e+03 ] >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- TOTAL: 4.88e-04 +- 0.00e+00, [ 4.88e-04 ] >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- READ_DATA: 3.58e+03 +- 9.50e+02, [ 4.26e+03 ] >|> 20251002 12:04:00.120 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- SEND_DATA: 1.95e-02 +- 1.45e-03, [ 1.85e-02 ] >|> 20251002 12:04:00.120 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Beginning read of next slice >|> 20251002 12:04:00.175 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Skipping to end of BAZ file. >|> 20251002 12:04:00.637 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Finished read of next slice >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- ---------------------------------------------------------- >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Full: 2.92e+03 +- 0.00e+00, [ 4.76e+03 ] >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- TOTAL: 7.32e-04 +- 1.04e-03, [ 0.00e+00 ] >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- READ_DATA: 3.84e+03 +- 1.30e+03, [ 4.76e+03 ] >|> 20251002 12:04:00.637 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- SEND_DATA: 2.14e-02 +- 1.58e-03, [ 2.25e-02 ] >|> 20251002 12:04:00.637 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Beginning read of next slice >|> 20251002 12:04:00.954 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.345235 >|> 20251002 12:04:01.109 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Finished read of next slice >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- ---------------------------------------------------------- >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Full: 3.13e+03 +- 0.00e+00, [ 5.03e+03 ] >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- TOTAL: 7.32e-04 +- 1.04e-03, [ 0.00e+00 ] >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- READ_DATA: 4.08e+03 +- 1.34e+03, [ 5.03e+03 ] >|> 20251002 12:04:01.109 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- SEND_DATA: 1.80e-02 +- 3.01e-03, [ 2.01e-02 ] >|> 20251002 12:04:01.109 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Beginning read of next slice >|> 20251002 12:04:01.588 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Finished read of next slice >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Anomalous profiling event (reported in ms): >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- READ_PROFILES measured slower than specified threshold of 3.40282e+38 standard deviations >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- IDs: Historic mean +- stdev, [ Current Measurements ] >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- ---------------------------------------------------------- >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Full: 3.00e+03 +- 0.00e+00, [ 5.64e+03 ] >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- TOTAL: 1.71e-03 +- 1.73e-03, [ 4.88e-04 ] >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- READ_DATA: 4.32e+03 +- 1.86e+03, [ 5.64e+03 ] >|> 20251002 12:04:01.588 -|- WARN -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- SEND_DATA: 1.83e-02 +- 4.53e-04, [ 1.86e-02 ] >|> 20251002 12:04:01.588 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Beginning read of next slice >|> 20251002 12:04:01.957 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.398806 >|> 20251002 12:04:02.561 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Skipping to end of BAZ file. >|> 20251002 12:04:02.602 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103934 -|- Finished read of next slice >|> 20251002 12:04:03.962 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.422615 >|> 20251002 12:04:04.965 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.494043 >|> 20251002 12:04:05.966 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.583327 >|> 20251002 12:04:07.850 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Skipping to end of BAZ file. >|> 20251002 12:04:09.904 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Skipping to end of BAZ file. >|> 20251002 12:04:13.986 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Finished read of next slice >|> 20251002 12:04:13.986 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Beginning read of next slice >|> 20251002 12:04:14.503 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Finished read of next slice >|> 20251002 12:04:14.504 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Beginning read of next slice >|> 20251002 12:04:15.238 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Skipping to end of BAZ file. >|> 20251002 12:04:15.343 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Skipping to end of BAZ file. >|> 20251002 12:04:15.535 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Skipping to end of BAZ file. >|> 20251002 12:04:15.987 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.607137 >|> 20251002 12:04:16.027 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Finished read of next slice >|> 20251002 12:04:16.028 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Beginning read of next slice >|> 20251002 12:04:16.338 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Finished read of next slice >|> 20251002 12:04:16.338 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Beginning read of next slice >|> 20251002 12:04:16.988 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.666660 >|> 20251002 12:04:17.989 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.678565 >|> 20251002 12:04:18.635 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Finished read of next slice >|> 20251002 12:04:18.636 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Beginning read of next slice >|> 20251002 12:04:19.999 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.702374 >|> 20251002 12:04:21.001 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.761897 >|> 20251002 12:04:22.003 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.791659 >|> 20251002 12:04:22.101 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Skipping to end of BAZ file. >|> 20251002 12:04:22.109 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103938 -|- Finished read of next slice >|> 20251002 12:04:23.138 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Skipping to end of BAZ file. >|> 20251002 12:04:23.162 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103937 -|- Finished read of next slice >|> 20251002 12:04:24.010 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.815468 >|> 20251002 12:04:26.014 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.845230 >|> 20251002 12:04:27.016 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.874991 >|> 20251002 12:04:29.550 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Skipping to end of BAZ file. >|> 20251002 12:04:29.554 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103935 -|- Finished read of next slice >|> 20251002 12:04:30.151 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Skipping to end of BAZ file. >|> 20251002 12:04:30.155 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103936 -|- Finished read of next slice >|> 20251002 12:04:30.807 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Skipping to end of BAZ file. >|> 20251002 12:04:30.811 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103939 -|- Finished read of next slice >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Final Performance Profiling Results for READ_PROFILES: (reported in milliseconds) >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: Gathered 24 samples. >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: % Compute, FullMean/OutlierMean FullDev/OutlierDev >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: Full Execution -- 7.53e+03 / 6.97e+03, 4.41e+03 / 4.68e+03 >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.00%, TOTAL -- 4.54e-04 / 5.98e-04, 6.37e-04 / 6.82e-04 >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 100.00%, READ_DATA -- 7.53e+03 / 6.97e+03, 4.41e+03 / 4.68e+03 >|> 20251002 12:04:30.857 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.00%, SEND_DATA -- 1.91e-02 / 1.94e-02, 1.78e-03 / 1.48e-03 >|> 20251002 12:04:31.026 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.898801 >|> 20251002 12:04:32.030 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.940467 >|> 20251002 12:04:33.031 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103933 -|- Sending progress 0.970228 >|> 20251002 12:04:33.632 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Closing BAM files >|> 20251002 12:04:33.632 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Writing PBI files >|> 20251002 12:04:33.752 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Corrected missing adapter (>35% per ZMW) in 30 ZMWs, 2.55754% of 1173 total ZMWs with adapters >|> 20251002 12:04:33.752 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Corrected missed adapter (<=35% per ZMW) in 361 ZMWs, 30.7758% of 1173 total ZMWs with adapters >|> 20251002 12:04:33.752 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Corrected adapters in 391 ZMWs, 33.3333% of 1173 total ZMWs with adapters >|> 20251002 12:04:33.752 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Adapter Correction imputed 1334 of 25253 total adapters (5.28254%) >|> 20251002 12:04:33.752 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Opening file metadata/m84082_251001_025627_s2_full_preview_29hr.sts.xml.tmp >|> 20251002 12:04:33.760 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Renaming file metadata/m84082_251001_025627_s2_full_preview_29hr.sts.xml.tmp -> metadata/m84082_251001_025627_s2_full_preview_29hr.sts.xml >|> 20251002 12:04:33.779 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- BAM files closed and PBIs written >|> 20251002 12:04:33.779 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Closing sts.h5 file >|> 20251002 12:04:33.781 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- sts.h5 file closed and written >|> 20251002 12:04:33.781 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Closing logging >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Logging closed >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:110344 -|- Finished ZMW processing 2520 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Finished >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Final Performance Profiling Results for COMPUTE_PROFILES: (reported in milliseconds) >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: Gathered 72126 samples. >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: % Compute, FullMean/OutlierMean FullDev/OutlierDev >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: Full Execution -- 1.27e+01 / -nan, 5.61e+01 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 90.78%, DATA_WAIT -- 1.16e+01 / 0.00e+00, 1.24e+00 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.00%, DATA_MOVE -- 2.56e-01 / 0.00e+00, 7.17e-01 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.00%, DATA_SEND -- 1.08e-01 / 0.00e+00, 5.47e-02 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.96%, PARSE_BINARY -- 3.51e+00 / 0.00e+00, 5.62e+00 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.37%, PROCESS_PACKETS -- 1.35e+00 / 0.00e+00, 3.01e+00 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.66%, FIND_HQRF -- 2.41e+00 / 0.00e+00, 3.93e+00 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.83%, FIND_INSERTS -- 3.03e+00 / 0.00e+00, 5.32e+00 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.00%, PROD_STATS -- 1.82e-02 / 0.00e+00, 2.75e-01 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 5.53%, FIND_SUBREAD -- 2.02e+01 / 0.00e+00, 3.57e+01 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.78%, ZMW_STATS -- 2.86e+00 / 0.00e+00, 4.78e+00 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- PerfReport: 0.07%, FINALIZE -- 2.67e-01 / 0.00e+00, 9.37e-01 / 0.00e+00 >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- joining thread pool >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- joining loggingThread_ >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- joining done >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Peak RSS : 16.240 GiB >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- ~ConvertBaz2BamDestroyed >|> 20251002 12:04:34.039 -|- INFO -|- PBLogger -|- nrtb-84082|P:103854|T:103854 -|- Remap Stats: shiftedHqRegionStart = 1351 noStartOnLabelTransition = 0 noEndOnLabelTransition = 0