+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 22482.8 |
num_iterations | 27 |
prior_probability | 0.675 |
tot_num_spectra | 43430 |
Comet discrim score [fval] negmean: -2.04 | |
pos model | gaussian (mean 2.92, stdev 2.11) |
neg model | gaussian (mean -0.95, stdev 1.09) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 0.999) |
neg model | (ntt=0 0.000, ntt=1 0.021, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.942, 1<=nmc<=2 0.058, nmc>=3 0.000) |
neg model | (nmc=0 0.491, 1<=nmc<=2 0.508, nmc>=3 0.002) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.030, 0 0.859, 1 0.102, 2 0.009, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.307, 0 0.315, 1 0.163, 2 0.117, 3 0.099) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 15433.3 |
num_iterations | 27 |
prior_probability | 0.580 |
tot_num_spectra | 37127 |
Comet discrim score [fval] negmean: -1.60 | |
pos model | gaussian (mean 4.05, stdev 2.49) |
neg model | gaussian (mean -0.54, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.019, ntt=2 0.981) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.831, 1<=nmc<=2 0.169, nmc>=3 0.000) |
neg model | (nmc=0 0.291, 1<=nmc<=2 0.700, nmc>=3 0.008) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.022, 0 0.774, 1 0.148, 2 0.049, 3 0.007) |
neg model | (-3 0.000, -2 0.000, -1 0.237, 0 0.227, 1 0.199, 2 0.175, 3 0.163) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 3069.7 |
num_iterations | 27 |
prior_probability | 0.488 |
tot_num_spectra | 9339 |
Comet discrim score [fval] negmean: -2.06 | |
pos model | gaussian (mean 1.92, stdev 1.53) |
neg model | gaussian (mean -1.25, stdev 0.81) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.026, ntt=2 0.974) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.681, 1<=nmc<=2 0.319, nmc>=3 0.000) |
neg model | (nmc=0 0.187, 1<=nmc<=2 0.795, nmc>=3 0.018) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.014, 0 0.764, 1 0.168, 2 0.047, 3 0.006) |
neg model | (-3 0.000, -2 0.000, -1 0.222, 0 0.217, 1 0.205, 2 0.186, 3 0.169) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 335.3 |
num_iterations | 27 |
prior_probability | 0.297 |
tot_num_spectra | 1888 |
Comet discrim score [fval] negmean: -2.90 | |
pos model | gaussian (mean 1.92, stdev 1.42) |
neg model | gaussian (mean -1.72, stdev 1.18) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.001, ntt=1 0.022, ntt=2 0.977) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.569, 1<=nmc<=2 0.430, nmc>=3 0.000) |
neg model | (nmc=0 0.150, 1<=nmc<=2 0.824, nmc>=3 0.027) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.004, 0 0.868, 1 0.114, 2 0.010, 3 0.004) |
neg model | (-3 0.000, -2 0.000, -1 0.217, 0 0.178, 1 0.220, 2 0.198, 3 0.186) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010791 |
pos_bandwidth | 0.010791 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_11 | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_11 |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T12:41:11 (id: 1) |
database_refresh | 2017-02-20T12:40:59 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5373 | 0.0000 | 22201 | 0 |
0.9990 | 0.6225 | 0.0001 | 25722 | 2 |
0.9900 | 0.7323 | 0.0007 | 30259 | 20 |
0.9800 | 0.7682 | 0.0013 | 31744 | 42 |
0.9500 | 0.8225 | 0.0035 | 33985 | 118 |
0.9000 | 0.8660 | 0.0072 | 35786 | 259 |
0.8500 | 0.8939 | 0.0113 | 36939 | 422 |
0.8000 | 0.9144 | 0.0157 | 37782 | 601 |
0.7500 | 0.9313 | 0.0205 | 38484 | 803 |
0.7000 | 0.9448 | 0.0253 | 39039 | 1014 |
0.6500 | 0.9532 | 0.0291 | 39387 | 1180 |
0.6000 | 0.9587 | 0.0321 | 39615 | 1315 |
0.5500 | 0.9638 | 0.0356 | 39826 | 1472 |
0.5000 | 0.9676 | 0.0388 | 39984 | 1615 |
0.4500 | 0.9716 | 0.0428 | 40147 | 1797 |
0.4000 | 0.9751 | 0.0472 | 40293 | 1995 |
0.3500 | 0.9784 | 0.0520 | 40427 | 2218 |
0.3000 | 0.9816 | 0.0580 | 40560 | 2496 |
0.2500 | 0.9846 | 0.0649 | 40684 | 2824 |
0.2000 | 0.9877 | 0.0743 | 40814 | 3277 |
0.1500 | 0.9910 | 0.0872 | 40948 | 3911 |
0.1000 | 0.9940 | 0.1050 | 41075 | 4818 |
0.0500 | 0.9971 | 0.1350 | 41200 | 6432 |
0.0000 | 1.0000 | 0.5498 | 41321 | 50463 |
+2 only | ||||
0.9999 | 0.5080 | 0.0000 | 11422 | 0 |
0.9990 | 0.6045 | 0.0001 | 13591 | 1 |
0.9900 | 0.7284 | 0.0008 | 16376 | 12 |
0.9800 | 0.7679 | 0.0015 | 17264 | 25 |
0.9500 | 0.8264 | 0.0038 | 18581 | 70 |
0.9000 | 0.8738 | 0.0077 | 19645 | 153 |
0.8500 | 0.9035 | 0.0121 | 20314 | 248 |
0.8000 | 0.9247 | 0.0165 | 20790 | 349 |
0.7500 | 0.9420 | 0.0213 | 21179 | 460 |
0.7000 | 0.9543 | 0.0257 | 21456 | 566 |
0.6500 | 0.9616 | 0.0290 | 21620 | 645 |
0.6000 | 0.9668 | 0.0318 | 21736 | 713 |
0.5500 | 0.9709 | 0.0346 | 21828 | 781 |
0.5000 | 0.9737 | 0.0369 | 21891 | 838 |
0.4500 | 0.9767 | 0.0400 | 21959 | 915 |
0.4000 | 0.9798 | 0.0438 | 22029 | 1010 |
0.3500 | 0.9824 | 0.0477 | 22087 | 1107 |
0.3000 | 0.9850 | 0.0526 | 22146 | 1229 |
0.2500 | 0.9872 | 0.0576 | 22195 | 1357 |
0.2000 | 0.9895 | 0.0647 | 22248 | 1540 |
0.1500 | 0.9920 | 0.0745 | 22302 | 1796 |
0.1000 | 0.9950 | 0.0925 | 22370 | 2280 |
0.0500 | 0.9976 | 0.1190 | 22429 | 3030 |
0.0000 | 1.0000 | 0.4823 | 22483 | 20947 |
+3 only | ||||
0.9999 | 0.5876 | 0.0000 | 9068 | 0 |
0.9990 | 0.6552 | 0.0001 | 10112 | 1 |
0.9900 | 0.7453 | 0.0005 | 11503 | 6 |
0.9800 | 0.7756 | 0.0011 | 11971 | 13 |
0.9500 | 0.8226 | 0.0030 | 12695 | 38 |
0.9000 | 0.8612 | 0.0063 | 13291 | 84 |
0.8500 | 0.8869 | 0.0102 | 13687 | 141 |
0.8000 | 0.9062 | 0.0144 | 13986 | 204 |
0.7500 | 0.9229 | 0.0192 | 14244 | 279 |
0.7000 | 0.9384 | 0.0248 | 14482 | 369 |
0.6500 | 0.9474 | 0.0288 | 14621 | 434 |
0.6000 | 0.9526 | 0.0317 | 14701 | 482 |
0.5500 | 0.9588 | 0.0360 | 14797 | 553 |
0.5000 | 0.9631 | 0.0396 | 14863 | 614 |
0.4500 | 0.9679 | 0.0445 | 14937 | 696 |
0.4000 | 0.9717 | 0.0493 | 14997 | 777 |
0.3500 | 0.9753 | 0.0547 | 15052 | 871 |
0.3000 | 0.9789 | 0.0613 | 15108 | 986 |
0.2500 | 0.9824 | 0.0693 | 15161 | 1129 |
0.2000 | 0.9863 | 0.0809 | 15222 | 1340 |
0.1500 | 0.9904 | 0.0969 | 15286 | 1640 |
0.1000 | 0.9933 | 0.1132 | 15330 | 1956 |
0.0500 | 0.9967 | 0.1464 | 15382 | 2639 |
0.0000 | 1.0000 | 0.5843 | 15433 | 21694 |
+4 only | ||||
0.9999 | 0.5245 | 0.0000 | 1610 | 0 |
0.9990 | 0.6117 | 0.0001 | 1878 | 0 |
0.9900 | 0.7088 | 0.0006 | 2176 | 1 |
0.9800 | 0.7469 | 0.0014 | 2293 | 3 |
0.9500 | 0.8005 | 0.0035 | 2457 | 9 |
0.9000 | 0.8428 | 0.0072 | 2587 | 19 |
0.8500 | 0.8668 | 0.0108 | 2661 | 29 |
0.8000 | 0.8867 | 0.0152 | 2722 | 42 |
0.7500 | 0.9018 | 0.0197 | 2768 | 56 |
0.7000 | 0.9134 | 0.0241 | 2804 | 69 |
0.6500 | 0.9264 | 0.0301 | 2844 | 88 |
0.6000 | 0.9356 | 0.0353 | 2872 | 105 |
0.5500 | 0.9427 | 0.0402 | 2894 | 121 |
0.5000 | 0.9506 | 0.0467 | 2918 | 143 |
0.4500 | 0.9565 | 0.0526 | 2936 | 163 |
0.4000 | 0.9610 | 0.0581 | 2950 | 182 |
0.3500 | 0.9666 | 0.0663 | 2967 | 211 |
0.3000 | 0.9719 | 0.0758 | 2983 | 245 |
0.2500 | 0.9781 | 0.0896 | 3003 | 295 |
0.2000 | 0.9828 | 0.1029 | 3017 | 346 |
0.1500 | 0.9873 | 0.1195 | 3031 | 411 |
0.1000 | 0.9917 | 0.1428 | 3044 | 507 |
0.0500 | 0.9955 | 0.1783 | 3056 | 663 |
0.0000 | 1.0000 | 0.6713 | 3070 | 6269 |
+5 only | ||||
0.9999 | 0.3012 | 0.0000 | 101 | 0 |
0.9990 | 0.4204 | 0.0002 | 141 | 0 |
0.9900 | 0.6105 | 0.0014 | 205 | 0 |
0.9800 | 0.6458 | 0.0021 | 217 | 0 |
0.9500 | 0.7497 | 0.0064 | 251 | 2 |
0.9000 | 0.7857 | 0.0095 | 263 | 3 |
0.8500 | 0.8250 | 0.0156 | 277 | 4 |
0.8000 | 0.8471 | 0.0206 | 284 | 6 |
0.7500 | 0.8725 | 0.0281 | 293 | 8 |
0.7000 | 0.8853 | 0.0331 | 297 | 10 |
0.6500 | 0.9014 | 0.0405 | 302 | 13 |
0.6000 | 0.9126 | 0.0467 | 306 | 15 |
0.5500 | 0.9177 | 0.0503 | 308 | 16 |
0.5000 | 0.9304 | 0.0604 | 312 | 20 |
0.4500 | 0.9387 | 0.0688 | 315 | 23 |
0.4000 | 0.9451 | 0.0761 | 317 | 26 |
0.3500 | 0.9528 | 0.0872 | 319 | 31 |
0.3000 | 0.9615 | 0.1019 | 322 | 37 |
0.2500 | 0.9690 | 0.1171 | 325 | 43 |
0.2000 | 0.9757 | 0.1345 | 327 | 51 |
0.1500 | 0.9834 | 0.1610 | 330 | 63 |
0.1000 | 0.9880 | 0.1840 | 331 | 75 |
0.0500 | 0.9939 | 0.2304 | 333 | 100 |
0.0000 | 1.0000 | 0.8224 | 335 | 1553 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 7351 | 0 |
0.0001 | 0.9986 | 26317 | 3 |
0.0002 | 0.9971 | 27728 | 6 |
0.0003 | 0.9956 | 28563 | 9 |
0.0004 | 0.9940 | 29158 | 12 |
0.0005 | 0.9926 | 29623 | 15 |
0.0006 | 0.9911 | 30011 | 18 |
0.0007 | 0.9895 | 30343 | 21 |
0.0008 | 0.9881 | 30632 | 25 |
0.0009 | 0.9867 | 30891 | 28 |
0.0010 | 0.9850 | 31124 | 31 |
0.0015 | 0.9776 | 32019 | 48 |
0.0020 | 0.9706 | 32673 | 66 |
0.0025 | 0.9637 | 33198 | 83 |
0.0030 | 0.9570 | 33637 | 101 |
0.0040 | 0.9432 | 34334 | 138 |
0.0050 | 0.9292 | 34884 | 175 |
0.0060 | 0.9153 | 35336 | 213 |
0.0070 | 0.9027 | 35722 | 252 |
0.0080 | 0.8897 | 36058 | 291 |
0.0090 | 0.8770 | 36356 | 330 |
0.0100 | 0.8646 | 36623 | 370 |
0.0150 | 0.8071 | 37671 | 574 |
0.0200 | 0.7538 | 38426 | 785 |
0.0250 | 0.7028 | 39008 | 1001 |
0.0300 | 0.6369 | 39461 | 1221 |
0.0400 | 0.4829 | 40036 | 1669 |
0.0500 | 0.3685 | 40374 | 2126 |
0.0750 | 0.1975 | 40823 | 3311 |
0.1000 | 0.1122 | 41045 | 4562 |
+2 only | |||
0.0000 | 1.0000 | 4004 | 0 |
0.0001 | 0.9988 | 13768 | 1 |
0.0002 | 0.9975 | 14649 | 3 |
0.0003 | 0.9962 | 15169 | 5 |
0.0004 | 0.9948 | 15544 | 6 |
0.0005 | 0.9934 | 15831 | 8 |
0.0006 | 0.9921 | 16068 | 10 |
0.0007 | 0.9907 | 16270 | 11 |
0.0008 | 0.9894 | 16446 | 13 |
0.0009 | 0.9881 | 16604 | 15 |
0.0010 | 0.9868 | 16747 | 17 |
0.0015 | 0.9796 | 17294 | 26 |
0.0020 | 0.9731 | 17687 | 35 |
0.0025 | 0.9665 | 17999 | 45 |
0.0030 | 0.9604 | 18258 | 55 |
0.0040 | 0.9470 | 18671 | 75 |
0.0050 | 0.9341 | 18998 | 96 |
0.0060 | 0.9214 | 19268 | 116 |
0.0070 | 0.9094 | 19495 | 138 |
0.0080 | 0.8969 | 19696 | 159 |
0.0090 | 0.8846 | 19872 | 181 |
0.0100 | 0.8726 | 20031 | 202 |
0.0150 | 0.8158 | 20646 | 315 |
0.0200 | 0.7639 | 21086 | 431 |
0.0250 | 0.7065 | 21418 | 550 |
0.0300 | 0.6356 | 21666 | 671 |
0.0400 | 0.4499 | 21960 | 916 |
0.0500 | 0.3254 | 22117 | 1165 |
0.0750 | 0.1480 | 22304 | 1810 |
0.1000 | 0.0835 | 22391 | 2489 |
+3 only | |||
0.0000 | 1.0000 | 2757 | 0 |
0.0001 | 0.9981 | 10455 | 1 |
0.0002 | 0.9962 | 10870 | 2 |
0.0003 | 0.9944 | 11117 | 3 |
0.0004 | 0.9927 | 11298 | 5 |
0.0005 | 0.9908 | 11444 | 6 |
0.0006 | 0.9891 | 11564 | 7 |
0.0007 | 0.9874 | 11668 | 8 |
0.0008 | 0.9853 | 11758 | 9 |
0.0009 | 0.9834 | 11836 | 11 |
0.0010 | 0.9817 | 11907 | 12 |
0.0015 | 0.9734 | 12186 | 18 |
0.0020 | 0.9657 | 12395 | 25 |
0.0025 | 0.9582 | 12563 | 32 |
0.0030 | 0.9495 | 12704 | 38 |
0.0040 | 0.9339 | 12926 | 52 |
0.0050 | 0.9195 | 13103 | 66 |
0.0060 | 0.9046 | 13251 | 80 |
0.0070 | 0.8906 | 13376 | 94 |
0.0080 | 0.8775 | 13485 | 109 |
0.0090 | 0.8633 | 13583 | 124 |
0.0100 | 0.8522 | 13672 | 138 |
0.0150 | 0.7921 | 14024 | 214 |
0.0200 | 0.7430 | 14282 | 292 |
0.0250 | 0.6985 | 14489 | 372 |
0.0300 | 0.6314 | 14656 | 454 |
0.0400 | 0.4961 | 14870 | 620 |
0.0500 | 0.3915 | 15005 | 791 |
0.0750 | 0.2232 | 15194 | 1233 |
0.1000 | 0.1380 | 15296 | 1700 |
+4 only | |||
0.0000 | 1.0000 | 537 | 0 |
0.0001 | 0.9986 | 1919 | 0 |
0.0002 | 0.9970 | 2020 | 0 |
0.0003 | 0.9951 | 2077 | 1 |
0.0004 | 0.9935 | 2115 | 1 |
0.0005 | 0.9919 | 2146 | 1 |
0.0006 | 0.9903 | 2172 | 1 |
0.0007 | 0.9881 | 2193 | 2 |
0.0008 | 0.9870 | 2212 | 2 |
0.0009 | 0.9860 | 2230 | 2 |
0.0010 | 0.9843 | 2246 | 2 |
0.0015 | 0.9787 | 2310 | 3 |
0.0020 | 0.9712 | 2358 | 5 |
0.0025 | 0.9656 | 2398 | 6 |
0.0030 | 0.9586 | 2432 | 7 |
0.0040 | 0.9439 | 2483 | 10 |
0.0050 | 0.9300 | 2523 | 13 |
0.0060 | 0.9109 | 2556 | 16 |
0.0070 | 0.9029 | 2583 | 18 |
0.0080 | 0.8887 | 2607 | 21 |
0.0090 | 0.8759 | 2629 | 24 |
0.0100 | 0.8615 | 2648 | 27 |
0.0150 | 0.8025 | 2720 | 42 |
0.0200 | 0.7477 | 2772 | 57 |
0.0250 | 0.6960 | 2812 | 72 |
0.0300 | 0.6503 | 2845 | 88 |
0.0400 | 0.5578 | 2894 | 121 |
0.0500 | 0.4715 | 2929 | 155 |
0.0750 | 0.3058 | 2982 | 243 |
0.1000 | 0.2082 | 3014 | 336 |
+5 only | |||
0.0000 | 1.0000 | 59 | 0 |
0.0001 | 0.9993 | 130 | 0 |
0.0002 | 0.9987 | 147 | 0 |
0.0003 | 0.9981 | 159 | 0 |
0.0004 | 0.9973 | 168 | 0 |
0.0005 | 0.9965 | 174 | 0 |
0.0006 | 0.9957 | 179 | 0 |
0.0007 | 0.9949 | 184 | 0 |
0.0008 | 0.9942 | 188 | 0 |
0.0009 | 0.9934 | 191 | 0 |
0.0010 | 0.9924 | 194 | 0 |
0.0015 | 0.9893 | 208 | 0 |
0.0020 | 0.9838 | 217 | 0 |
0.0025 | 0.9778 | 222 | 1 |
0.0030 | 0.9730 | 228 | 1 |
0.0040 | 0.9672 | 236 | 1 |
0.0050 | 0.9622 | 244 | 1 |
0.0060 | 0.9544 | 250 | 2 |
0.0070 | 0.9438 | 255 | 2 |
0.0080 | 0.9327 | 260 | 2 |
0.0090 | 0.9028 | 263 | 3 |
0.0100 | 0.8985 | 266 | 3 |
0.0150 | 0.8526 | 277 | 4 |
0.0200 | 0.8031 | 285 | 6 |
0.0250 | 0.7675 | 290 | 8 |
0.0300 | 0.7117 | 295 | 10 |
0.0400 | 0.6548 | 303 | 13 |
0.0500 | 0.5504 | 308 | 17 |
0.0750 | 0.4067 | 317 | 27 |
0.1000 | 0.3074 | 322 | 37 |
peptideprophet | |
---|---|
time | 2017-02-20T12:41:11 |
author | AKeller@ISB |
est_tot_num_correct | 41321.1 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_11.pep.xml |
database_refresh | |
time | 2017-02-20T12:40:59 |
interact | |
time | 2017-02-20T12:40:19 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_11.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_11.pep.xml |
tpp_models | |
time | Mon Feb 20 12:43:31 2017 |