+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 24441.8 |
num_iterations | 27 |
prior_probability | 0.664 |
tot_num_spectra | 48949 |
Comet discrim score [fval] negmean: -2.06 | |
pos model | gaussian (mean 2.91, stdev 2.16) |
neg model | gaussian (mean -0.99, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.024, ntt=2 0.976) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.938, 1<=nmc<=2 0.062, nmc>=3 0.000) |
neg model | (nmc=0 0.481, 1<=nmc<=2 0.517, nmc>=3 0.002) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.033, 0 0.842, 1 0.115, 2 0.010, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.307, 0 0.304, 1 0.169, 2 0.118, 3 0.102) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 14588.5 |
num_iterations | 26 |
prior_probability | 0.572 |
tot_num_spectra | 35943 |
Comet discrim score [fval] negmean: -1.65 | |
pos model | gaussian (mean 4.08, stdev 2.51) |
neg model | gaussian (mean -0.58, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.021, ntt=2 0.979) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.821, 1<=nmc<=2 0.179, nmc>=3 0.000) |
neg model | (nmc=0 0.305, 1<=nmc<=2 0.688, nmc>=3 0.008) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.021, 0 0.759, 1 0.161, 2 0.051, 3 0.008) |
neg model | (-3 0.000, -2 0.000, -1 0.235, 0 0.225, 1 0.200, 2 0.177, 3 0.163) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 2803.7 |
num_iterations | 26 |
prior_probability | 0.487 |
tot_num_spectra | 8554 |
Comet discrim score [fval] negmean: -2.05 | |
pos model | gaussian (mean 1.89, stdev 1.51) |
neg model | gaussian (mean -1.21, stdev 0.83) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.025, ntt=2 0.975) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.676, 1<=nmc<=2 0.324, nmc>=3 0.000) |
neg model | (nmc=0 0.186, 1<=nmc<=2 0.796, nmc>=3 0.018) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.013, 0 0.760, 1 0.173, 2 0.045, 3 0.009) |
neg model | (-3 0.000, -2 0.000, -1 0.236, 0 0.198, 1 0.208, 2 0.189, 3 0.170) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 319.3 |
num_iterations | 28 |
prior_probability | 0.259 |
tot_num_spectra | 2171 |
Comet discrim score [fval] negmean: -2.85 | |
pos model | gaussian (mean 1.96, stdev 1.48) |
neg model | gaussian (mean -1.69, stdev 1.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.025, ntt=2 0.975) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.635, 1<=nmc<=2 0.365, nmc>=3 0.000) |
neg model | (nmc=0 0.161, 1<=nmc<=2 0.819, nmc>=3 0.020) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.005, 0 0.808, 1 0.161, 2 0.021, 3 0.005) |
neg model | (-3 0.000, -2 0.000, -1 0.215, 0 0.208, 1 0.200, 2 0.198, 3 0.179) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010855 |
pos_bandwidth | 0.010855 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_16 | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_16 |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T12:54:49 (id: 1) |
database_refresh | 2017-02-20T12:54:38 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5446 | 0.0000 | 22959 | 0 |
0.9990 | 0.6282 | 0.0001 | 26482 | 2 |
0.9900 | 0.7369 | 0.0007 | 31062 | 21 |
0.9800 | 0.7738 | 0.0013 | 32616 | 44 |
0.9500 | 0.8249 | 0.0033 | 34771 | 116 |
0.9000 | 0.8680 | 0.0070 | 36591 | 259 |
0.8500 | 0.8957 | 0.0111 | 37755 | 424 |
0.8000 | 0.9162 | 0.0154 | 38620 | 605 |
0.7500 | 0.9315 | 0.0198 | 39265 | 792 |
0.7000 | 0.9439 | 0.0243 | 39790 | 990 |
0.6500 | 0.9519 | 0.0279 | 40126 | 1151 |
0.6000 | 0.9564 | 0.0304 | 40314 | 1264 |
0.5500 | 0.9614 | 0.0339 | 40527 | 1422 |
0.5000 | 0.9659 | 0.0376 | 40715 | 1592 |
0.4500 | 0.9700 | 0.0418 | 40887 | 1784 |
0.4000 | 0.9736 | 0.0463 | 41042 | 1994 |
0.3500 | 0.9771 | 0.0515 | 41189 | 2238 |
0.3000 | 0.9802 | 0.0573 | 41320 | 2513 |
0.2500 | 0.9834 | 0.0647 | 41454 | 2867 |
0.2000 | 0.9867 | 0.0747 | 41594 | 3357 |
0.1500 | 0.9903 | 0.0890 | 41746 | 4081 |
0.1000 | 0.9936 | 0.1074 | 41882 | 5038 |
0.0500 | 0.9967 | 0.1383 | 42015 | 6745 |
0.0000 | 1.0000 | 0.5591 | 42153 | 53464 |
+2 only | ||||
0.9999 | 0.5239 | 0.0000 | 12806 | 0 |
0.9990 | 0.6139 | 0.0001 | 15006 | 1 |
0.9900 | 0.7327 | 0.0007 | 17908 | 13 |
0.9800 | 0.7728 | 0.0015 | 18888 | 28 |
0.9500 | 0.8288 | 0.0036 | 20256 | 74 |
0.9000 | 0.8750 | 0.0075 | 21388 | 162 |
0.8500 | 0.9037 | 0.0117 | 22088 | 261 |
0.8000 | 0.9251 | 0.0161 | 22611 | 371 |
0.7500 | 0.9404 | 0.0204 | 22985 | 479 |
0.7000 | 0.9520 | 0.0245 | 23268 | 585 |
0.6500 | 0.9576 | 0.0271 | 23406 | 651 |
0.6000 | 0.9617 | 0.0293 | 23505 | 710 |
0.5500 | 0.9658 | 0.0322 | 23606 | 786 |
0.5000 | 0.9696 | 0.0354 | 23700 | 870 |
0.4500 | 0.9731 | 0.0389 | 23784 | 963 |
0.4000 | 0.9763 | 0.0429 | 23863 | 1070 |
0.3500 | 0.9795 | 0.0477 | 23940 | 1198 |
0.3000 | 0.9822 | 0.0527 | 24006 | 1336 |
0.2500 | 0.9851 | 0.0595 | 24077 | 1524 |
0.2000 | 0.9880 | 0.0685 | 24149 | 1775 |
0.1500 | 0.9912 | 0.0815 | 24227 | 2149 |
0.1000 | 0.9945 | 0.1004 | 24307 | 2713 |
0.0500 | 0.9973 | 0.1287 | 24376 | 3601 |
0.0000 | 1.0000 | 0.5007 | 24442 | 24507 |
+3 only | ||||
0.9999 | 0.5951 | 0.0000 | 8681 | 0 |
0.9990 | 0.6641 | 0.0001 | 9688 | 1 |
0.9900 | 0.7515 | 0.0005 | 10963 | 6 |
0.9800 | 0.7820 | 0.0011 | 11408 | 12 |
0.9500 | 0.8255 | 0.0028 | 12043 | 34 |
0.9000 | 0.8636 | 0.0061 | 12599 | 78 |
0.8500 | 0.8886 | 0.0099 | 12964 | 129 |
0.8000 | 0.9077 | 0.0140 | 13243 | 188 |
0.7500 | 0.9231 | 0.0185 | 13467 | 254 |
0.7000 | 0.9364 | 0.0234 | 13661 | 328 |
0.6500 | 0.9477 | 0.0285 | 13825 | 406 |
0.6000 | 0.9520 | 0.0310 | 13888 | 444 |
0.5500 | 0.9573 | 0.0346 | 13966 | 501 |
0.5000 | 0.9622 | 0.0387 | 14037 | 565 |
0.4500 | 0.9671 | 0.0438 | 14108 | 646 |
0.4000 | 0.9712 | 0.0488 | 14168 | 726 |
0.3500 | 0.9750 | 0.0545 | 14224 | 820 |
0.3000 | 0.9786 | 0.0612 | 14277 | 931 |
0.2500 | 0.9821 | 0.0691 | 14327 | 1064 |
0.2000 | 0.9860 | 0.0806 | 14384 | 1261 |
0.1500 | 0.9900 | 0.0965 | 14443 | 1543 |
0.1000 | 0.9929 | 0.1125 | 14484 | 1836 |
0.0500 | 0.9961 | 0.1442 | 14532 | 2448 |
0.0000 | 1.0000 | 0.5941 | 14589 | 21354 |
+4 only | ||||
0.9999 | 0.4890 | 0.0000 | 1371 | 0 |
0.9990 | 0.5863 | 0.0001 | 1644 | 0 |
0.9900 | 0.7135 | 0.0008 | 2000 | 2 |
0.9800 | 0.7525 | 0.0015 | 2110 | 3 |
0.9500 | 0.7970 | 0.0033 | 2235 | 7 |
0.9000 | 0.8397 | 0.0071 | 2354 | 17 |
0.8500 | 0.8707 | 0.0117 | 2441 | 29 |
0.8000 | 0.8901 | 0.0159 | 2496 | 40 |
0.7500 | 0.9051 | 0.0202 | 2538 | 52 |
0.7000 | 0.9212 | 0.0261 | 2583 | 69 |
0.6500 | 0.9317 | 0.0310 | 2612 | 84 |
0.6000 | 0.9391 | 0.0352 | 2633 | 96 |
0.5500 | 0.9493 | 0.0423 | 2662 | 117 |
0.5000 | 0.9562 | 0.0479 | 2681 | 135 |
0.4500 | 0.9611 | 0.0528 | 2695 | 150 |
0.4000 | 0.9665 | 0.0591 | 2710 | 170 |
0.3500 | 0.9705 | 0.0650 | 2721 | 189 |
0.3000 | 0.9744 | 0.0720 | 2732 | 212 |
0.2500 | 0.9780 | 0.0802 | 2742 | 239 |
0.2000 | 0.9816 | 0.0905 | 2752 | 274 |
0.1500 | 0.9858 | 0.1069 | 2764 | 331 |
0.1000 | 0.9904 | 0.1314 | 2777 | 420 |
0.0500 | 0.9954 | 0.1760 | 2791 | 596 |
0.0000 | 1.0000 | 0.6722 | 2804 | 5750 |
+5 only | ||||
0.9999 | 0.3163 | 0.0000 | 101 | 0 |
0.9990 | 0.4509 | 0.0002 | 144 | 0 |
0.9900 | 0.5976 | 0.0011 | 191 | 0 |
0.9800 | 0.6593 | 0.0023 | 211 | 0 |
0.9500 | 0.7409 | 0.0060 | 237 | 1 |
0.9000 | 0.7816 | 0.0097 | 250 | 2 |
0.8500 | 0.8228 | 0.0160 | 263 | 4 |
0.8000 | 0.8462 | 0.0211 | 270 | 6 |
0.7500 | 0.8610 | 0.0252 | 275 | 7 |
0.7000 | 0.8701 | 0.0286 | 278 | 8 |
0.6500 | 0.8849 | 0.0357 | 283 | 10 |
0.6000 | 0.9025 | 0.0458 | 288 | 14 |
0.5500 | 0.9189 | 0.0566 | 293 | 18 |
0.5000 | 0.9319 | 0.0672 | 298 | 21 |
0.4500 | 0.9406 | 0.0759 | 300 | 25 |
0.4000 | 0.9460 | 0.0819 | 302 | 27 |
0.3500 | 0.9531 | 0.0916 | 304 | 31 |
0.3000 | 0.9571 | 0.0986 | 306 | 33 |
0.2500 | 0.9648 | 0.1148 | 308 | 40 |
0.2000 | 0.9704 | 0.1297 | 310 | 46 |
0.1500 | 0.9778 | 0.1562 | 312 | 58 |
0.1000 | 0.9829 | 0.1806 | 314 | 69 |
0.0500 | 0.9900 | 0.2401 | 316 | 100 |
0.0000 | 1.0000 | 0.8529 | 319 | 1852 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 7583 | 0 |
0.0001 | 0.9985 | 27131 | 3 |
0.0002 | 0.9970 | 28510 | 6 |
0.0003 | 0.9955 | 29341 | 9 |
0.0004 | 0.9939 | 29946 | 12 |
0.0005 | 0.9925 | 30422 | 15 |
0.0006 | 0.9911 | 30820 | 19 |
0.0007 | 0.9895 | 31160 | 22 |
0.0008 | 0.9881 | 31458 | 25 |
0.0009 | 0.9867 | 31723 | 29 |
0.0010 | 0.9850 | 31962 | 32 |
0.0015 | 0.9774 | 32884 | 49 |
0.0020 | 0.9706 | 33554 | 67 |
0.0025 | 0.9630 | 34088 | 85 |
0.0030 | 0.9552 | 34522 | 104 |
0.0040 | 0.9404 | 35207 | 141 |
0.0050 | 0.9267 | 35749 | 180 |
0.0060 | 0.9129 | 36197 | 219 |
0.0070 | 0.9005 | 36579 | 258 |
0.0080 | 0.8875 | 36915 | 298 |
0.0090 | 0.8754 | 37214 | 338 |
0.0100 | 0.8638 | 37485 | 379 |
0.0150 | 0.8051 | 38546 | 587 |
0.0200 | 0.7476 | 39295 | 802 |
0.0250 | 0.6915 | 39863 | 1023 |
0.0300 | 0.6074 | 40287 | 1247 |
0.0400 | 0.4695 | 40817 | 1702 |
0.0500 | 0.3641 | 41149 | 2167 |
0.0750 | 0.1986 | 41599 | 3374 |
0.1000 | 0.1190 | 41834 | 4650 |
+2 only | |||
0.0000 | 1.0000 | 4417 | 0 |
0.0001 | 0.9987 | 15297 | 2 |
0.0002 | 0.9973 | 16157 | 3 |
0.0003 | 0.9959 | 16685 | 5 |
0.0004 | 0.9945 | 17068 | 7 |
0.0005 | 0.9931 | 17368 | 9 |
0.0006 | 0.9918 | 17618 | 11 |
0.0007 | 0.9905 | 17833 | 13 |
0.0008 | 0.9891 | 18023 | 14 |
0.0009 | 0.9879 | 18191 | 16 |
0.0010 | 0.9865 | 18344 | 18 |
0.0015 | 0.9792 | 18929 | 28 |
0.0020 | 0.9729 | 19351 | 39 |
0.0025 | 0.9668 | 19694 | 49 |
0.0030 | 0.9593 | 19974 | 60 |
0.0040 | 0.9451 | 20410 | 82 |
0.0050 | 0.9315 | 20752 | 104 |
0.0060 | 0.9192 | 21032 | 127 |
0.0070 | 0.9061 | 21273 | 150 |
0.0080 | 0.8940 | 21484 | 173 |
0.0090 | 0.8808 | 21670 | 197 |
0.0100 | 0.8704 | 21837 | 221 |
0.0150 | 0.8147 | 22494 | 343 |
0.0200 | 0.7544 | 22954 | 469 |
0.0250 | 0.6950 | 23296 | 598 |
0.0300 | 0.5859 | 23531 | 729 |
0.0400 | 0.4366 | 23807 | 993 |
0.0500 | 0.3252 | 23972 | 1263 |
0.0750 | 0.1723 | 24192 | 1962 |
0.1000 | 0.1014 | 24306 | 2702 |
+3 only | |||
0.0000 | 1.0000 | 2611 | 0 |
0.0001 | 0.9981 | 10008 | 1 |
0.0002 | 0.9962 | 10393 | 2 |
0.0003 | 0.9943 | 10628 | 3 |
0.0004 | 0.9925 | 10798 | 4 |
0.0005 | 0.9904 | 10934 | 5 |
0.0006 | 0.9887 | 11044 | 7 |
0.0007 | 0.9869 | 11139 | 8 |
0.0008 | 0.9852 | 11223 | 9 |
0.0009 | 0.9833 | 11297 | 10 |
0.0010 | 0.9816 | 11364 | 11 |
0.0015 | 0.9724 | 11624 | 17 |
0.0020 | 0.9638 | 11813 | 24 |
0.0025 | 0.9549 | 11963 | 30 |
0.0030 | 0.9469 | 12087 | 36 |
0.0040 | 0.9320 | 12290 | 49 |
0.0050 | 0.9172 | 12451 | 63 |
0.0060 | 0.9017 | 12586 | 76 |
0.0070 | 0.8873 | 12701 | 90 |
0.0080 | 0.8741 | 12802 | 103 |
0.0090 | 0.8613 | 12893 | 117 |
0.0100 | 0.8492 | 12975 | 131 |
0.0150 | 0.7890 | 13297 | 203 |
0.0200 | 0.7349 | 13533 | 276 |
0.0250 | 0.6854 | 13716 | 352 |
0.0300 | 0.6177 | 13866 | 429 |
0.0400 | 0.4847 | 14057 | 586 |
0.0500 | 0.3888 | 14181 | 748 |
0.0750 | 0.2229 | 14358 | 1166 |
0.1000 | 0.1394 | 14454 | 1607 |
+4 only | |||
0.0000 | 1.0000 | 497 | 0 |
0.0001 | 0.9988 | 1658 | 0 |
0.0002 | 0.9977 | 1772 | 0 |
0.0003 | 0.9962 | 1836 | 1 |
0.0004 | 0.9952 | 1883 | 1 |
0.0005 | 0.9938 | 1920 | 1 |
0.0006 | 0.9926 | 1951 | 1 |
0.0007 | 0.9915 | 1978 | 1 |
0.0008 | 0.9900 | 2001 | 2 |
0.0009 | 0.9884 | 2021 | 2 |
0.0010 | 0.9867 | 2039 | 2 |
0.0015 | 0.9802 | 2108 | 3 |
0.0020 | 0.9738 | 2157 | 4 |
0.0025 | 0.9648 | 2194 | 6 |
0.0030 | 0.9550 | 2223 | 7 |
0.0040 | 0.9405 | 2267 | 9 |
0.0050 | 0.9262 | 2302 | 12 |
0.0060 | 0.9106 | 2330 | 14 |
0.0070 | 0.9013 | 2353 | 17 |
0.0080 | 0.8894 | 2376 | 19 |
0.0090 | 0.8805 | 2395 | 22 |
0.0100 | 0.8713 | 2414 | 25 |
0.0150 | 0.8129 | 2486 | 38 |
0.0200 | 0.7549 | 2537 | 52 |
0.0250 | 0.7119 | 2576 | 67 |
0.0300 | 0.6584 | 2608 | 81 |
0.0400 | 0.5597 | 2654 | 111 |
0.0500 | 0.4768 | 2688 | 142 |
0.0750 | 0.2795 | 2736 | 223 |
0.1000 | 0.1695 | 2760 | 307 |
+5 only | |||
0.0000 | 1.0000 | 64 | 0 |
0.0001 | 0.9994 | 132 | 0 |
0.0002 | 0.9988 | 151 | 0 |
0.0003 | 0.9982 | 164 | 0 |
0.0004 | 0.9965 | 171 | 0 |
0.0005 | 0.9950 | 176 | 0 |
0.0006 | 0.9938 | 180 | 0 |
0.0007 | 0.9933 | 183 | 0 |
0.0008 | 0.9924 | 186 | 0 |
0.0009 | 0.9912 | 188 | 0 |
0.0010 | 0.9903 | 191 | 0 |
0.0015 | 0.9869 | 200 | 0 |
0.0020 | 0.9833 | 208 | 0 |
0.0025 | 0.9771 | 213 | 1 |
0.0030 | 0.9739 | 218 | 1 |
0.0040 | 0.9628 | 226 | 1 |
0.0050 | 0.9588 | 233 | 1 |
0.0060 | 0.9474 | 238 | 2 |
0.0070 | 0.9358 | 242 | 2 |
0.0080 | 0.9208 | 246 | 2 |
0.0090 | 0.9063 | 249 | 2 |
0.0100 | 0.8984 | 251 | 3 |
0.0150 | 0.8668 | 262 | 4 |
0.0200 | 0.8084 | 270 | 6 |
0.0250 | 0.7786 | 276 | 7 |
0.0300 | 0.6885 | 280 | 9 |
0.0400 | 0.6266 | 286 | 12 |
0.0500 | 0.5894 | 291 | 16 |
0.0750 | 0.4517 | 301 | 25 |
0.1000 | 0.2911 | 306 | 35 |
peptideprophet | |
---|---|
time | 2017-02-20T12:54:49 |
author | AKeller@ISB |
est_tot_num_correct | 42153.3 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_16.pep.xml |
database_refresh | |
time | 2017-02-20T12:54:38 |
interact | |
time | 2017-02-20T12:53:55 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_16.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_16.pep.xml |
tpp_models | |
time | Mon Feb 20 12:57:20 2017 |