+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 23568.1 |
num_iterations | 26 |
prior_probability | 0.643 |
tot_num_spectra | 48593 |
Comet discrim score [fval] negmean: -1.99 | |
pos model | gaussian (mean 2.99, stdev 2.11) |
neg model | gaussian (mean -0.96, stdev 1.03) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.021, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.932, 1<=nmc<=2 0.068, nmc>=3 0.000) |
neg model | (nmc=0 0.478, 1<=nmc<=2 0.521, nmc>=3 0.002) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.033, 0 0.849, 1 0.108, 2 0.010, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.301, 0 0.323, 1 0.165, 2 0.116, 3 0.095) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 14321.3 |
num_iterations | 26 |
prior_probability | 0.560 |
tot_num_spectra | 36211 |
Comet discrim score [fval] negmean: -1.62 | |
pos model | gaussian (mean 4.07, stdev 2.48) |
neg model | gaussian (mean -0.56, stdev 1.06) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.021, ntt=2 0.979) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.821, 1<=nmc<=2 0.179, nmc>=3 0.000) |
neg model | (nmc=0 0.279, 1<=nmc<=2 0.713, nmc>=3 0.008) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.022, 0 0.775, 1 0.151, 2 0.045, 3 0.007) |
neg model | (-3 0.000, -2 0.000, -1 0.235, 0 0.225, 1 0.194, 2 0.180, 3 0.166) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 2702.5 |
num_iterations | 26 |
prior_probability | 0.489 |
tot_num_spectra | 8138 |
Comet discrim score [fval] negmean: -2.03 | |
pos model | gaussian (mean 1.89, stdev 1.54) |
neg model | gaussian (mean -1.22, stdev 0.81) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.023, ntt=2 0.977) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.679, 1<=nmc<=2 0.321, nmc>=3 0.000) |
neg model | (nmc=0 0.176, 1<=nmc<=2 0.808, nmc>=3 0.017) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.016, 0 0.795, 1 0.145, 2 0.038, 3 0.006) |
neg model | (-3 0.000, -2 0.000, -1 0.236, 0 0.217, 1 0.198, 2 0.180, 3 0.169) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 346.8 |
num_iterations | 27 |
prior_probability | 0.295 |
tot_num_spectra | 1994 |
Comet discrim score [fval] negmean: -2.94 | |
pos model | gaussian (mean 1.84, stdev 1.53) |
neg model | gaussian (mean -1.74, stdev 1.19) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.022, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.562, 1<=nmc<=2 0.438, nmc>=3 0.000) |
neg model | (nmc=0 0.158, 1<=nmc<=2 0.816, nmc>=3 0.026) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.010, 0 0.869, 1 0.114, 2 0.006, 3 0.001) |
neg model | (-3 0.000, -2 0.000, -1 0.209, 0 0.193, 1 0.220, 2 0.183, 3 0.196) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010911 |
pos_bandwidth | 0.010911 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_16A | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_16A |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T12:51:35 (id: 1) |
database_refresh | 2017-02-20T12:51:24 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5575 | 0.0000 | 22822 | 0 |
0.9990 | 0.6375 | 0.0001 | 26099 | 2 |
0.9900 | 0.7397 | 0.0006 | 30282 | 19 |
0.9800 | 0.7726 | 0.0012 | 31629 | 39 |
0.9500 | 0.8222 | 0.0032 | 33661 | 109 |
0.9000 | 0.8618 | 0.0066 | 35283 | 236 |
0.8500 | 0.8870 | 0.0104 | 36313 | 382 |
0.8000 | 0.9068 | 0.0147 | 37123 | 553 |
0.7500 | 0.9230 | 0.0194 | 37786 | 746 |
0.7000 | 0.9363 | 0.0243 | 38333 | 953 |
0.6500 | 0.9473 | 0.0293 | 38783 | 1170 |
0.6000 | 0.9547 | 0.0334 | 39086 | 1350 |
0.5500 | 0.9606 | 0.0374 | 39327 | 1527 |
0.5000 | 0.9659 | 0.0417 | 39541 | 1722 |
0.4500 | 0.9702 | 0.0461 | 39719 | 1919 |
0.4000 | 0.9739 | 0.0506 | 39870 | 2123 |
0.3500 | 0.9775 | 0.0559 | 40018 | 2372 |
0.3000 | 0.9809 | 0.0620 | 40155 | 2655 |
0.2500 | 0.9837 | 0.0686 | 40273 | 2967 |
0.2000 | 0.9868 | 0.0777 | 40399 | 3404 |
0.1500 | 0.9902 | 0.0912 | 40539 | 4067 |
0.1000 | 0.9936 | 0.1101 | 40675 | 5032 |
0.0500 | 0.9968 | 0.1419 | 40809 | 6748 |
0.0000 | 1.0000 | 0.5688 | 40939 | 53997 |
+2 only | ||||
0.9999 | 0.5426 | 0.0000 | 12788 | 0 |
0.9990 | 0.6281 | 0.0001 | 14803 | 1 |
0.9900 | 0.7360 | 0.0007 | 17345 | 12 |
0.9800 | 0.7711 | 0.0013 | 18173 | 24 |
0.9500 | 0.8242 | 0.0034 | 19426 | 67 |
0.9000 | 0.8678 | 0.0071 | 20452 | 146 |
0.8500 | 0.8931 | 0.0109 | 21049 | 231 |
0.8000 | 0.9135 | 0.0152 | 21529 | 333 |
0.7500 | 0.9292 | 0.0197 | 21900 | 440 |
0.7000 | 0.9422 | 0.0244 | 22207 | 556 |
0.6500 | 0.9529 | 0.0293 | 22459 | 677 |
0.6000 | 0.9606 | 0.0335 | 22640 | 785 |
0.5500 | 0.9664 | 0.0374 | 22775 | 884 |
0.5000 | 0.9715 | 0.0416 | 22896 | 993 |
0.4500 | 0.9751 | 0.0452 | 22980 | 1088 |
0.4000 | 0.9779 | 0.0487 | 23048 | 1179 |
0.3500 | 0.9810 | 0.0531 | 23119 | 1298 |
0.3000 | 0.9837 | 0.0581 | 23183 | 1431 |
0.2500 | 0.9862 | 0.0639 | 23243 | 1587 |
0.2000 | 0.9887 | 0.0716 | 23303 | 1796 |
0.1500 | 0.9914 | 0.0821 | 23365 | 2091 |
0.1000 | 0.9945 | 0.1002 | 23438 | 2610 |
0.0500 | 0.9974 | 0.1288 | 23506 | 3475 |
0.0000 | 1.0000 | 0.5150 | 23568 | 25025 |
+3 only | ||||
0.9999 | 0.5957 | 0.0000 | 8531 | 0 |
0.9990 | 0.6651 | 0.0001 | 9524 | 1 |
0.9900 | 0.7554 | 0.0005 | 10818 | 6 |
0.9800 | 0.7836 | 0.0010 | 11222 | 12 |
0.9500 | 0.8254 | 0.0027 | 11821 | 32 |
0.9000 | 0.8591 | 0.0057 | 12304 | 71 |
0.8500 | 0.8838 | 0.0095 | 12657 | 121 |
0.8000 | 0.9018 | 0.0135 | 12915 | 176 |
0.7500 | 0.9186 | 0.0184 | 13156 | 246 |
0.7000 | 0.9328 | 0.0236 | 13359 | 323 |
0.6500 | 0.9446 | 0.0290 | 13528 | 404 |
0.6000 | 0.9505 | 0.0324 | 13613 | 456 |
0.5500 | 0.9558 | 0.0360 | 13689 | 511 |
0.5000 | 0.9610 | 0.0403 | 13762 | 578 |
0.4500 | 0.9659 | 0.0453 | 13832 | 656 |
0.4000 | 0.9704 | 0.0509 | 13898 | 745 |
0.3500 | 0.9748 | 0.0573 | 13960 | 849 |
0.3000 | 0.9784 | 0.0639 | 14012 | 956 |
0.2500 | 0.9814 | 0.0708 | 14055 | 1072 |
0.2000 | 0.9849 | 0.0812 | 14106 | 1246 |
0.1500 | 0.9894 | 0.0986 | 14169 | 1550 |
0.1000 | 0.9928 | 0.1173 | 14218 | 1889 |
0.0500 | 0.9964 | 0.1516 | 14269 | 2550 |
0.0000 | 1.0000 | 0.6045 | 14321 | 21890 |
+4 only | ||||
0.9999 | 0.5195 | 0.0000 | 1404 | 0 |
0.9990 | 0.6057 | 0.0001 | 1637 | 0 |
0.9900 | 0.7137 | 0.0007 | 1929 | 1 |
0.9800 | 0.7487 | 0.0013 | 2023 | 3 |
0.9500 | 0.8059 | 0.0036 | 2178 | 8 |
0.9000 | 0.8402 | 0.0067 | 2271 | 15 |
0.8500 | 0.8649 | 0.0104 | 2337 | 25 |
0.8000 | 0.8870 | 0.0152 | 2397 | 37 |
0.7500 | 0.9015 | 0.0196 | 2436 | 49 |
0.7000 | 0.9122 | 0.0236 | 2465 | 60 |
0.6500 | 0.9210 | 0.0278 | 2489 | 71 |
0.6000 | 0.9320 | 0.0342 | 2519 | 89 |
0.5500 | 0.9412 | 0.0405 | 2544 | 107 |
0.5000 | 0.9476 | 0.0459 | 2561 | 123 |
0.4500 | 0.9553 | 0.0536 | 2582 | 146 |
0.4000 | 0.9612 | 0.0605 | 2598 | 167 |
0.3500 | 0.9665 | 0.0682 | 2612 | 191 |
0.3000 | 0.9732 | 0.0801 | 2630 | 229 |
0.2500 | 0.9779 | 0.0903 | 2643 | 262 |
0.2000 | 0.9829 | 0.1041 | 2656 | 309 |
0.1500 | 0.9869 | 0.1186 | 2667 | 359 |
0.1000 | 0.9914 | 0.1427 | 2679 | 446 |
0.0500 | 0.9955 | 0.1791 | 2690 | 587 |
0.0000 | 1.0000 | 0.6679 | 2703 | 5435 |
+5 only | ||||
0.9999 | 0.2855 | 0.0000 | 99 | 0 |
0.9990 | 0.3892 | 0.0001 | 135 | 0 |
0.9900 | 0.5473 | 0.0011 | 190 | 0 |
0.9800 | 0.6069 | 0.0024 | 210 | 1 |
0.9500 | 0.6818 | 0.0065 | 236 | 2 |
0.9000 | 0.7407 | 0.0120 | 257 | 3 |
0.8500 | 0.7787 | 0.0180 | 270 | 5 |
0.8000 | 0.8119 | 0.0257 | 282 | 7 |
0.7500 | 0.8474 | 0.0365 | 294 | 11 |
0.7000 | 0.8702 | 0.0449 | 302 | 14 |
0.6500 | 0.8875 | 0.0530 | 308 | 17 |
0.6000 | 0.9039 | 0.0614 | 313 | 21 |
0.5500 | 0.9207 | 0.0718 | 319 | 25 |
0.5000 | 0.9297 | 0.0788 | 322 | 28 |
0.4500 | 0.9351 | 0.0839 | 324 | 30 |
0.4000 | 0.9401 | 0.0893 | 326 | 32 |
0.3500 | 0.9433 | 0.0938 | 327 | 34 |
0.3000 | 0.9508 | 0.1064 | 330 | 39 |
0.2500 | 0.9579 | 0.1212 | 332 | 46 |
0.2000 | 0.9637 | 0.1364 | 334 | 53 |
0.1500 | 0.9730 | 0.1668 | 337 | 68 |
0.1000 | 0.9807 | 0.2035 | 340 | 87 |
0.0500 | 0.9913 | 0.2838 | 344 | 136 |
0.0000 | 1.0000 | 0.8261 | 347 | 1647 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 7273 | 0 |
0.0001 | 0.9984 | 26805 | 3 |
0.0002 | 0.9968 | 28087 | 6 |
0.0003 | 0.9952 | 28858 | 9 |
0.0004 | 0.9935 | 29415 | 12 |
0.0005 | 0.9919 | 29849 | 15 |
0.0006 | 0.9903 | 30207 | 18 |
0.0007 | 0.9887 | 30513 | 21 |
0.0008 | 0.9872 | 30781 | 25 |
0.0009 | 0.9855 | 31020 | 28 |
0.0010 | 0.9837 | 31234 | 31 |
0.0015 | 0.9753 | 32051 | 48 |
0.0020 | 0.9676 | 32641 | 65 |
0.0025 | 0.9603 | 33111 | 83 |
0.0030 | 0.9530 | 33506 | 101 |
0.0040 | 0.9384 | 34143 | 137 |
0.0050 | 0.9232 | 34642 | 174 |
0.0060 | 0.9091 | 35053 | 212 |
0.0070 | 0.8947 | 35402 | 250 |
0.0080 | 0.8811 | 35708 | 288 |
0.0090 | 0.8682 | 35978 | 327 |
0.0100 | 0.8549 | 36222 | 366 |
0.0150 | 0.7961 | 37176 | 566 |
0.0200 | 0.7427 | 37866 | 773 |
0.0250 | 0.6908 | 38406 | 985 |
0.0300 | 0.6424 | 38841 | 1202 |
0.0400 | 0.5190 | 39461 | 1645 |
0.0500 | 0.4059 | 39853 | 2098 |
0.0750 | 0.2124 | 40366 | 3274 |
0.1000 | 0.1242 | 40610 | 4513 |
+2 only | |||
0.0000 | 1.0000 | 4206 | 0 |
0.0001 | 0.9986 | 15137 | 2 |
0.0002 | 0.9970 | 15912 | 3 |
0.0003 | 0.9956 | 16384 | 5 |
0.0004 | 0.9940 | 16726 | 7 |
0.0005 | 0.9924 | 16991 | 9 |
0.0006 | 0.9909 | 17210 | 10 |
0.0007 | 0.9896 | 17399 | 12 |
0.0008 | 0.9880 | 17565 | 14 |
0.0009 | 0.9866 | 17712 | 16 |
0.0010 | 0.9848 | 17844 | 18 |
0.0015 | 0.9769 | 18349 | 28 |
0.0020 | 0.9694 | 18712 | 38 |
0.0025 | 0.9623 | 18999 | 48 |
0.0030 | 0.9558 | 19242 | 58 |
0.0040 | 0.9426 | 19635 | 79 |
0.0050 | 0.9296 | 19951 | 100 |
0.0060 | 0.9160 | 20211 | 122 |
0.0070 | 0.9013 | 20431 | 144 |
0.0080 | 0.8879 | 20621 | 166 |
0.0090 | 0.8742 | 20786 | 189 |
0.0100 | 0.8609 | 20935 | 212 |
0.0150 | 0.8017 | 21510 | 328 |
0.0200 | 0.7468 | 21923 | 448 |
0.0250 | 0.6923 | 22240 | 571 |
0.0300 | 0.6443 | 22494 | 696 |
0.0400 | 0.5155 | 22853 | 953 |
0.0500 | 0.3822 | 23072 | 1215 |
0.0750 | 0.1827 | 23326 | 1892 |
0.1000 | 0.1005 | 23437 | 2606 |
+3 only | |||
0.0000 | 1.0000 | 2525 | 0 |
0.0001 | 0.9982 | 9853 | 1 |
0.0002 | 0.9962 | 10247 | 2 |
0.0003 | 0.9943 | 10480 | 3 |
0.0004 | 0.9924 | 10649 | 4 |
0.0005 | 0.9906 | 10783 | 5 |
0.0006 | 0.9887 | 10891 | 7 |
0.0007 | 0.9869 | 10984 | 8 |
0.0008 | 0.9849 | 11066 | 9 |
0.0009 | 0.9830 | 11138 | 10 |
0.0010 | 0.9807 | 11202 | 11 |
0.0015 | 0.9711 | 11445 | 17 |
0.0020 | 0.9630 | 11624 | 23 |
0.0025 | 0.9541 | 11767 | 30 |
0.0030 | 0.9447 | 11885 | 36 |
0.0040 | 0.9252 | 12068 | 49 |
0.0050 | 0.9096 | 12213 | 61 |
0.0060 | 0.8963 | 12334 | 75 |
0.0070 | 0.8814 | 12440 | 88 |
0.0080 | 0.8685 | 12534 | 101 |
0.0090 | 0.8555 | 12618 | 115 |
0.0100 | 0.8428 | 12695 | 129 |
0.0150 | 0.7811 | 12998 | 198 |
0.0200 | 0.7350 | 13225 | 270 |
0.0250 | 0.6858 | 13406 | 344 |
0.0300 | 0.6347 | 13555 | 420 |
0.0400 | 0.5051 | 13758 | 574 |
0.0500 | 0.4063 | 13889 | 732 |
0.0750 | 0.2282 | 14078 | 1142 |
0.1000 | 0.1462 | 14174 | 1576 |
+4 only | |||
0.0000 | 1.0000 | 480 | 0 |
0.0001 | 0.9986 | 1674 | 0 |
0.0002 | 0.9972 | 1769 | 0 |
0.0003 | 0.9956 | 1823 | 1 |
0.0004 | 0.9941 | 1863 | 1 |
0.0005 | 0.9925 | 1893 | 1 |
0.0006 | 0.9909 | 1917 | 1 |
0.0007 | 0.9892 | 1938 | 1 |
0.0008 | 0.9881 | 1955 | 2 |
0.0009 | 0.9864 | 1972 | 2 |
0.0010 | 0.9852 | 1987 | 2 |
0.0015 | 0.9768 | 2044 | 3 |
0.0020 | 0.9719 | 2086 | 4 |
0.0025 | 0.9645 | 2122 | 5 |
0.0030 | 0.9567 | 2149 | 7 |
0.0040 | 0.9439 | 2195 | 9 |
0.0050 | 0.9231 | 2229 | 11 |
0.0060 | 0.9101 | 2255 | 14 |
0.0070 | 0.8958 | 2278 | 16 |
0.0080 | 0.8847 | 2298 | 19 |
0.0090 | 0.8737 | 2317 | 21 |
0.0100 | 0.8572 | 2333 | 24 |
0.0150 | 0.8044 | 2396 | 37 |
0.0200 | 0.7441 | 2441 | 50 |
0.0250 | 0.6787 | 2474 | 64 |
0.0300 | 0.6286 | 2501 | 78 |
0.0400 | 0.5522 | 2542 | 107 |
0.0500 | 0.4691 | 2574 | 136 |
0.0750 | 0.3213 | 2623 | 214 |
0.1000 | 0.2125 | 2653 | 296 |
+5 only | |||
0.0000 | 1.0000 | 68 | 0 |
0.0001 | 0.9993 | 131 | 0 |
0.0002 | 0.9985 | 145 | 0 |
0.0003 | 0.9976 | 154 | 0 |
0.0004 | 0.9972 | 161 | 0 |
0.0005 | 0.9966 | 167 | 0 |
0.0006 | 0.9961 | 172 | 0 |
0.0007 | 0.9955 | 177 | 0 |
0.0008 | 0.9946 | 181 | 0 |
0.0009 | 0.9943 | 185 | 0 |
0.0010 | 0.9926 | 189 | 0 |
0.0015 | 0.9872 | 199 | 0 |
0.0020 | 0.9836 | 207 | 0 |
0.0025 | 0.9783 | 212 | 1 |
0.0030 | 0.9689 | 217 | 1 |
0.0040 | 0.9629 | 224 | 1 |
0.0050 | 0.9558 | 230 | 1 |
0.0060 | 0.9506 | 236 | 1 |
0.0070 | 0.9461 | 240 | 2 |
0.0080 | 0.9392 | 245 | 2 |
0.0090 | 0.9224 | 250 | 2 |
0.0100 | 0.9156 | 252 | 3 |
0.0150 | 0.8810 | 265 | 4 |
0.0200 | 0.8349 | 274 | 6 |
0.0250 | 0.8051 | 282 | 7 |
0.0300 | 0.7677 | 288 | 9 |
0.0400 | 0.7248 | 298 | 13 |
0.0500 | 0.6578 | 306 | 17 |
0.0750 | 0.5185 | 321 | 27 |
0.1000 | 0.3297 | 329 | 37 |
peptideprophet | |
---|---|
time | 2017-02-20T12:51:35 |
author | AKeller@ISB |
est_tot_num_correct | 40938.8 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_16A.pep.xml |
database_refresh | |
time | 2017-02-20T12:51:24 |
interact | |
time | 2017-02-20T12:50:42 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_16A.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_16A.pep.xml |
tpp_models | |
time | Mon Feb 20 12:53:55 2017 |