---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.280.0400.4320.09
10.28 < nsp <= 0.870.0350.1760.20
20.87 < nsp <= 1.620.0590.1070.55
31.62 < nsp <= 2.670.0770.0761.01
42.67 < nsp <= 3.920.0920.0571.60
53.92 < nsp <= 5.990.1070.0532.01
65.99 < nsp <= 8.980.1250.0383.30
78.98 < nsp <= 14.980.1430.0245.89
814.98 < nsp <= 27.820.1530.0198.07
927.82 < nsp < inf0.1690.0179.65

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4400.00018030
0.990.6900.00028310
0.980.8690.00235639
0.970.8860.003363211
0.960.8950.003367212
0.950.9010.004369713
0.900.9200.005377219
0.800.9440.009387237
0.700.9620.015394461
0.600.9780.024401097
0.500.9930.0354072148
0.401.0000.0424101180
0.301.0000.0424101180
0.201.0000.0424101180
0.101.0000.0424101180
0.001.0000.0424101180
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000018030
0.00170.989333356
0.00210.987234607
0.00260.979935779
0.00300.9684364311
0.00400.9361372715
0.00510.8983377419
0.00600.8699380323
0.00700.8454382727
0.00800.8259384831
0.00900.8065386635
0.01010.7857388340
0.01510.7016394460
0.02010.6320398782
0.02510.58714021103
0.03010.53864048126
0.04000.46344093171

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra22295
num_input_3_spectra13628
num_input_4_spectra2507
num_input_5_spectra292
num_predicted_correct_prots4101.1
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_20A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_20A.pep.xml
total_no_spectrum_ids38382.8
program_details
analysisproteinprophet
time2017-02-20T13:14:05
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 13:14:14 2017




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