---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.280.0400.4430.09
10.28 < nsp <= 0.890.0370.1800.20
20.89 < nsp <= 1.660.0620.1090.57
31.66 < nsp <= 2.670.0780.0761.04
42.67 < nsp <= 3.990.0940.0571.64
53.99 < nsp <= 5.990.1050.0472.21
65.99 < nsp <= 8.970.1230.0353.53
78.97 < nsp <= 14.960.1400.0245.80
814.96 < nsp <= 26.820.1510.01510.04
926.82 < nsp < inf0.1710.01412.13

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4390.00017800
0.990.6930.00028120
0.980.8610.00234949
0.970.8790.003356510
0.960.8880.003360512
0.950.8940.004362913
0.900.9160.005371820
0.800.9390.009381036
0.700.9580.016388762
0.600.9750.024395699
0.500.9910.0374021154
0.401.0000.0464058194
0.301.0000.0464058194
0.201.0000.0464058194
0.101.0000.0464058194
0.001.0000.0464058194
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000017800
0.00170.988932996
0.00200.986733967
0.00250.979135049
0.00300.9663358111
0.00400.9366365815
0.00500.9067370519
0.00600.8784373723
0.00700.8576376427
0.00800.8320378631
0.00900.8093380435
0.01000.7826382039
0.01510.7092388160
0.02010.6431392581
0.02500.59623959102
0.03000.54443989123
0.04010.47714036168

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra22554
num_input_3_spectra13088
num_input_4_spectra2401
num_input_5_spectra283
num_predicted_correct_prots4057.6
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_28A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_28A.pep.xml
total_no_spectrum_ids37975.5
program_details
analysisproteinprophet
time2017-02-20T13:33:21
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 13:33:30 2017




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