---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.290.0380.4500.09
10.29 < nsp <= 0.870.0350.1740.20
20.87 < nsp <= 1.670.0590.0830.71
31.67 < nsp <= 2.700.0740.0641.15
42.70 < nsp <= 3.940.0880.0571.53
53.94 < nsp <= 5.830.1020.0521.98
65.83 < nsp <= 8.880.1280.0512.50
78.88 < nsp <= 14.970.1480.0334.44
814.97 < nsp <= 28.780.1570.0198.05
928.78 < nsp < inf0.1710.01610.75

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4440.00016490
0.990.6920.00025730
0.980.8490.00231548
0.970.8690.003323110
0.960.8790.003326811
0.950.8870.004329612
0.900.9090.005338019
0.800.9360.010347736
0.700.9570.017355562
0.600.9710.025361092
0.500.9890.0383676145
0.401.0000.0493717192
0.301.0000.0493717192
0.201.0000.0493717192
0.101.0000.0493717192
0.001.0000.0493717192
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000016490
0.00160.988429495
0.00210.984930897
0.00250.979331678
0.00300.9692323410
0.00400.9443331413
0.00500.9185336517
0.00600.8864339621
0.00700.8624342224
0.00800.8380344228
0.00900.8204346031
0.01010.8011347635
0.01500.7283353654
0.02020.6530358074
0.02510.5968361293
0.03000.55633639113
0.04010.48583684154

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra18882
num_input_3_spectra13803
num_input_4_spectra3299
num_input_5_spectra458
num_predicted_correct_prots3716.9
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_32A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_32A.pep.xml
total_no_spectrum_ids36089.3
program_details
analysisproteinprophet
time2017-02-20T13:40:10
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 13:40:19 2017




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