+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 20086.7 |
num_iterations | 27 |
prior_probability | 0.658 |
tot_num_spectra | 40309 |
Comet discrim score [fval] negmean: -2.09 | |
pos model | gaussian (mean 2.94, stdev 2.10) |
neg model | gaussian (mean -0.94, stdev 1.15) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.022, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.878, 1<=nmc<=2 0.122, nmc>=3 0.000) |
neg model | (nmc=0 0.485, 1<=nmc<=2 0.513, nmc>=3 0.002) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.028, 0 0.855, 1 0.108, 2 0.009, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.303, 0 0.317, 1 0.161, 2 0.118, 3 0.100) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 16153.4 |
num_iterations | 26 |
prior_probability | 0.583 |
tot_num_spectra | 38578 |
Comet discrim score [fval] negmean: -1.60 | |
pos model | gaussian (mean 3.98, stdev 2.52) |
neg model | gaussian (mean -0.53, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.018, ntt=2 0.982) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.691, 1<=nmc<=2 0.309, nmc>=3 0.000) |
neg model | (nmc=0 0.282, 1<=nmc<=2 0.709, nmc>=3 0.009) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.023, 0 0.766, 1 0.157, 2 0.048, 3 0.007) |
neg model | (-3 0.000, -2 0.000, -1 0.242, 0 0.227, 1 0.199, 2 0.172, 3 0.159) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 4008.9 |
num_iterations | 27 |
prior_probability | 0.521 |
tot_num_spectra | 11250 |
Comet discrim score [fval] negmean: -2.05 | |
pos model | gaussian (mean 1.90, stdev 1.54) |
neg model | gaussian (mean -1.24, stdev 0.81) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.020, ntt=2 0.979) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.495, 1<=nmc<=2 0.505, nmc>=3 0.000) |
neg model | (nmc=0 0.194, 1<=nmc<=2 0.791, nmc>=3 0.015) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.012, 0 0.792, 1 0.154, 2 0.037, 3 0.005) |
neg model | (-3 0.000, -2 0.000, -1 0.235, 0 0.217, 1 0.201, 2 0.188, 3 0.160) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 575.9 |
num_iterations | 27 |
prior_probability | 0.361 |
tot_num_spectra | 2614 |
Comet discrim score [fval] negmean: -2.98 | |
pos model | gaussian (mean 1.75, stdev 1.54) |
neg model | gaussian (mean -1.82, stdev 1.17) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.024, ntt=2 0.976) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.358, 1<=nmc<=2 0.642, nmc>=3 0.000) |
neg model | (nmc=0 0.151, 1<=nmc<=2 0.821, nmc>=3 0.028) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.006, 0 0.864, 1 0.121, 2 0.008, 3 0.001) |
neg model | (-3 0.000, -2 0.000, -1 0.194, 0 0.172, 1 0.215, 2 0.211, 3 0.207) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010797 |
pos_bandwidth | 0.010797 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_36A | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_36A |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T13:48:56 (id: 1) |
database_refresh | 2017-02-20T13:48:45 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5069 | 0.0000 | 20695 | 0 |
0.9990 | 0.5961 | 0.0001 | 24335 | 2 |
0.9900 | 0.7113 | 0.0007 | 29041 | 21 |
0.9800 | 0.7486 | 0.0014 | 30562 | 44 |
0.9500 | 0.8024 | 0.0036 | 32756 | 119 |
0.9000 | 0.8484 | 0.0076 | 34636 | 266 |
0.8500 | 0.8764 | 0.0118 | 35777 | 427 |
0.8000 | 0.8969 | 0.0162 | 36617 | 604 |
0.7500 | 0.9130 | 0.0209 | 37272 | 794 |
0.7000 | 0.9275 | 0.0262 | 37864 | 1017 |
0.6500 | 0.9397 | 0.0317 | 38362 | 1255 |
0.6000 | 0.9477 | 0.0362 | 38690 | 1452 |
0.5500 | 0.9543 | 0.0406 | 38958 | 1650 |
0.5000 | 0.9599 | 0.0452 | 39187 | 1855 |
0.4500 | 0.9652 | 0.0505 | 39402 | 2094 |
0.4000 | 0.9702 | 0.0565 | 39610 | 2373 |
0.3500 | 0.9750 | 0.0634 | 39802 | 2696 |
0.3000 | 0.9793 | 0.0712 | 39978 | 3064 |
0.2500 | 0.9839 | 0.0814 | 40167 | 3559 |
0.2000 | 0.9872 | 0.0908 | 40301 | 4024 |
0.1500 | 0.9902 | 0.1024 | 40425 | 4611 |
0.1000 | 0.9934 | 0.1204 | 40556 | 5551 |
0.0500 | 0.9967 | 0.1518 | 40692 | 7284 |
0.0000 | 1.0000 | 0.5598 | 40825 | 51926 |
+2 only | ||||
0.9999 | 0.4662 | 0.0000 | 9364 | 0 |
0.9990 | 0.5689 | 0.0001 | 11427 | 1 |
0.9900 | 0.7032 | 0.0009 | 14125 | 12 |
0.9800 | 0.7464 | 0.0017 | 14993 | 25 |
0.9500 | 0.8087 | 0.0042 | 16244 | 68 |
0.9000 | 0.8580 | 0.0084 | 17234 | 146 |
0.8500 | 0.8878 | 0.0127 | 17833 | 230 |
0.8000 | 0.9088 | 0.0172 | 18255 | 319 |
0.7500 | 0.9250 | 0.0217 | 18580 | 412 |
0.7000 | 0.9385 | 0.0266 | 18852 | 515 |
0.6500 | 0.9490 | 0.0313 | 19062 | 616 |
0.6000 | 0.9567 | 0.0355 | 19217 | 708 |
0.5500 | 0.9625 | 0.0395 | 19334 | 794 |
0.5000 | 0.9673 | 0.0434 | 19430 | 882 |
0.4500 | 0.9719 | 0.0479 | 19522 | 983 |
0.4000 | 0.9758 | 0.0525 | 19600 | 1087 |
0.3500 | 0.9796 | 0.0581 | 19676 | 1214 |
0.3000 | 0.9828 | 0.0639 | 19741 | 1348 |
0.2500 | 0.9863 | 0.0719 | 19812 | 1536 |
0.2000 | 0.9890 | 0.0797 | 19865 | 1720 |
0.1500 | 0.9916 | 0.0899 | 19917 | 1968 |
0.1000 | 0.9943 | 0.1059 | 19973 | 2366 |
0.0500 | 0.9974 | 0.1362 | 20035 | 3158 |
0.0000 | 1.0000 | 0.5017 | 20087 | 20222 |
+3 only | ||||
0.9999 | 0.5644 | 0.0000 | 9117 | 0 |
0.9990 | 0.6355 | 0.0001 | 10265 | 1 |
0.9900 | 0.7279 | 0.0006 | 11758 | 7 |
0.9800 | 0.7565 | 0.0011 | 12219 | 14 |
0.9500 | 0.8004 | 0.0029 | 12928 | 38 |
0.9000 | 0.8420 | 0.0066 | 13601 | 90 |
0.8500 | 0.8675 | 0.0105 | 14013 | 149 |
0.8000 | 0.8879 | 0.0150 | 14342 | 218 |
0.7500 | 0.9046 | 0.0199 | 14612 | 297 |
0.7000 | 0.9204 | 0.0258 | 14868 | 393 |
0.6500 | 0.9345 | 0.0321 | 15096 | 501 |
0.6000 | 0.9416 | 0.0361 | 15211 | 570 |
0.5500 | 0.9482 | 0.0406 | 15316 | 648 |
0.5000 | 0.9542 | 0.0456 | 15414 | 737 |
0.4500 | 0.9599 | 0.0513 | 15505 | 838 |
0.4000 | 0.9662 | 0.0589 | 15608 | 977 |
0.3500 | 0.9719 | 0.0671 | 15699 | 1130 |
0.3000 | 0.9771 | 0.0765 | 15784 | 1307 |
0.2500 | 0.9825 | 0.0882 | 15870 | 1535 |
0.2000 | 0.9860 | 0.0981 | 15927 | 1732 |
0.1500 | 0.9894 | 0.1109 | 15982 | 1993 |
0.1000 | 0.9929 | 0.1300 | 16039 | 2397 |
0.0500 | 0.9963 | 0.1611 | 16093 | 3090 |
0.0000 | 1.0000 | 0.5813 | 16153 | 22425 |
+4 only | ||||
0.9999 | 0.5116 | 0.0000 | 2051 | 0 |
0.9990 | 0.6039 | 0.0001 | 2421 | 0 |
0.9900 | 0.7055 | 0.0007 | 2828 | 2 |
0.9800 | 0.7445 | 0.0014 | 2985 | 4 |
0.9500 | 0.7935 | 0.0034 | 3181 | 11 |
0.9000 | 0.8359 | 0.0071 | 3351 | 24 |
0.8500 | 0.8615 | 0.0110 | 3454 | 38 |
0.8000 | 0.8800 | 0.0151 | 3528 | 54 |
0.7500 | 0.8926 | 0.0189 | 3578 | 69 |
0.7000 | 0.9062 | 0.0240 | 3633 | 89 |
0.6500 | 0.9189 | 0.0300 | 3684 | 114 |
0.6000 | 0.9320 | 0.0375 | 3736 | 146 |
0.5500 | 0.9424 | 0.0445 | 3778 | 176 |
0.5000 | 0.9495 | 0.0503 | 3806 | 202 |
0.4500 | 0.9562 | 0.0570 | 3833 | 232 |
0.4000 | 0.9620 | 0.0639 | 3857 | 263 |
0.3500 | 0.9674 | 0.0717 | 3878 | 300 |
0.3000 | 0.9730 | 0.0814 | 3900 | 346 |
0.2500 | 0.9793 | 0.0950 | 3926 | 412 |
0.2000 | 0.9843 | 0.1089 | 3946 | 482 |
0.1500 | 0.9878 | 0.1218 | 3960 | 549 |
0.1000 | 0.9918 | 0.1429 | 3976 | 663 |
0.0500 | 0.9956 | 0.1769 | 3991 | 858 |
0.0000 | 1.0000 | 0.6437 | 4009 | 7241 |
+5 only | ||||
0.9999 | 0.2830 | 0.0000 | 163 | 0 |
0.9990 | 0.3854 | 0.0001 | 222 | 0 |
0.9900 | 0.5722 | 0.0014 | 330 | 0 |
0.9800 | 0.6337 | 0.0027 | 365 | 1 |
0.9500 | 0.6992 | 0.0057 | 403 | 2 |
0.9000 | 0.7812 | 0.0133 | 450 | 6 |
0.8500 | 0.8284 | 0.0203 | 477 | 10 |
0.8000 | 0.8543 | 0.0257 | 492 | 13 |
0.7500 | 0.8717 | 0.0308 | 502 | 16 |
0.7000 | 0.8881 | 0.0367 | 512 | 19 |
0.6500 | 0.9033 | 0.0437 | 520 | 24 |
0.6000 | 0.9142 | 0.0496 | 527 | 27 |
0.5500 | 0.9222 | 0.0549 | 531 | 31 |
0.5000 | 0.9303 | 0.0616 | 536 | 35 |
0.4500 | 0.9402 | 0.0712 | 541 | 42 |
0.4000 | 0.9462 | 0.0779 | 545 | 46 |
0.3500 | 0.9526 | 0.0871 | 549 | 52 |
0.3000 | 0.9610 | 0.1015 | 554 | 62 |
0.2500 | 0.9700 | 0.1202 | 559 | 76 |
0.2000 | 0.9770 | 0.1383 | 563 | 90 |
0.1500 | 0.9814 | 0.1526 | 565 | 102 |
0.1000 | 0.9871 | 0.1796 | 569 | 124 |
0.0500 | 0.9945 | 0.2373 | 573 | 178 |
0.0000 | 1.0000 | 0.7797 | 576 | 2038 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 7276 | 0 |
0.0001 | 0.9987 | 24782 | 2 |
0.0002 | 0.9973 | 26200 | 5 |
0.0003 | 0.9960 | 27053 | 8 |
0.0004 | 0.9946 | 27684 | 11 |
0.0005 | 0.9932 | 28179 | 14 |
0.0006 | 0.9918 | 28586 | 17 |
0.0007 | 0.9904 | 28932 | 20 |
0.0008 | 0.9889 | 29234 | 23 |
0.0009 | 0.9874 | 29498 | 27 |
0.0010 | 0.9860 | 29735 | 30 |
0.0015 | 0.9791 | 30664 | 46 |
0.0020 | 0.9722 | 31337 | 63 |
0.0025 | 0.9652 | 31870 | 80 |
0.0030 | 0.9579 | 32305 | 97 |
0.0040 | 0.9446 | 33001 | 133 |
0.0050 | 0.9326 | 33555 | 169 |
0.0060 | 0.9209 | 34023 | 205 |
0.0070 | 0.9075 | 34420 | 243 |
0.0080 | 0.8954 | 34765 | 281 |
0.0090 | 0.8834 | 35072 | 319 |
0.0100 | 0.8708 | 35347 | 357 |
0.0150 | 0.8134 | 36412 | 555 |
0.0200 | 0.7586 | 37164 | 759 |
0.0250 | 0.7115 | 37746 | 968 |
0.0300 | 0.6683 | 38222 | 1183 |
0.0400 | 0.5566 | 38925 | 1622 |
0.0500 | 0.4545 | 39386 | 2074 |
0.0750 | 0.2807 | 40054 | 3249 |
0.1000 | 0.1597 | 40403 | 4490 |
+2 only | |||
0.0000 | 1.0000 | 3579 | 0 |
0.0001 | 0.9989 | 11474 | 1 |
0.0002 | 0.9978 | 12291 | 2 |
0.0003 | 0.9966 | 12783 | 4 |
0.0004 | 0.9955 | 13144 | 5 |
0.0005 | 0.9942 | 13426 | 7 |
0.0006 | 0.9930 | 13660 | 8 |
0.0007 | 0.9918 | 13855 | 10 |
0.0008 | 0.9907 | 14028 | 11 |
0.0009 | 0.9894 | 14181 | 13 |
0.0010 | 0.9880 | 14319 | 14 |
0.0015 | 0.9821 | 14850 | 22 |
0.0020 | 0.9758 | 15235 | 31 |
0.0025 | 0.9699 | 15538 | 39 |
0.0030 | 0.9631 | 15787 | 48 |
0.0040 | 0.9521 | 16184 | 65 |
0.0050 | 0.9395 | 16497 | 83 |
0.0060 | 0.9285 | 16754 | 101 |
0.0070 | 0.9163 | 16974 | 120 |
0.0080 | 0.9051 | 17166 | 139 |
0.0090 | 0.8941 | 17335 | 158 |
0.0100 | 0.8817 | 17488 | 177 |
0.0150 | 0.8249 | 18068 | 275 |
0.0200 | 0.7687 | 18469 | 377 |
0.0250 | 0.7161 | 18770 | 482 |
0.0300 | 0.6649 | 19010 | 588 |
0.0400 | 0.5445 | 19348 | 807 |
0.0500 | 0.4305 | 19560 | 1030 |
0.0750 | 0.2275 | 19835 | 1609 |
0.1000 | 0.1143 | 19955 | 2219 |
+3 only | |||
0.0000 | 1.0000 | 2894 | 0 |
0.0001 | 0.9982 | 10583 | 1 |
0.0002 | 0.9963 | 11024 | 2 |
0.0003 | 0.9948 | 11295 | 3 |
0.0004 | 0.9931 | 11497 | 5 |
0.0005 | 0.9913 | 11656 | 6 |
0.0006 | 0.9896 | 11785 | 7 |
0.0007 | 0.9878 | 11894 | 8 |
0.0008 | 0.9856 | 11989 | 10 |
0.0009 | 0.9839 | 12071 | 11 |
0.0010 | 0.9821 | 12146 | 12 |
0.0015 | 0.9737 | 12435 | 19 |
0.0020 | 0.9656 | 12650 | 25 |
0.0025 | 0.9564 | 12818 | 32 |
0.0030 | 0.9487 | 12956 | 39 |
0.0040 | 0.9353 | 13183 | 53 |
0.0050 | 0.9223 | 13369 | 67 |
0.0060 | 0.9067 | 13523 | 82 |
0.0070 | 0.8935 | 13657 | 96 |
0.0080 | 0.8807 | 13773 | 111 |
0.0090 | 0.8677 | 13877 | 126 |
0.0100 | 0.8557 | 13971 | 141 |
0.0150 | 0.7997 | 14344 | 219 |
0.0200 | 0.7490 | 14618 | 299 |
0.0250 | 0.7075 | 14838 | 381 |
0.0300 | 0.6742 | 15025 | 465 |
0.0400 | 0.5543 | 15304 | 638 |
0.0500 | 0.4595 | 15487 | 816 |
0.0750 | 0.3072 | 15771 | 1280 |
0.1000 | 0.1912 | 15937 | 1772 |
+4 only | |||
0.0000 | 1.0000 | 695 | 0 |
0.0001 | 0.9988 | 2458 | 0 |
0.0002 | 0.9970 | 2589 | 1 |
0.0003 | 0.9958 | 2669 | 1 |
0.0004 | 0.9941 | 2726 | 1 |
0.0005 | 0.9925 | 2771 | 1 |
0.0006 | 0.9911 | 2807 | 2 |
0.0007 | 0.9895 | 2838 | 2 |
0.0008 | 0.9881 | 2865 | 2 |
0.0009 | 0.9864 | 2888 | 3 |
0.0010 | 0.9854 | 2910 | 3 |
0.0015 | 0.9786 | 2998 | 5 |
0.0020 | 0.9716 | 3063 | 6 |
0.0025 | 0.9636 | 3113 | 8 |
0.0030 | 0.9560 | 3153 | 10 |
0.0040 | 0.9430 | 3217 | 13 |
0.0050 | 0.9308 | 3270 | 17 |
0.0060 | 0.9194 | 3315 | 20 |
0.0070 | 0.9011 | 3350 | 24 |
0.0080 | 0.8870 | 3382 | 27 |
0.0090 | 0.8754 | 3408 | 31 |
0.0100 | 0.8603 | 3433 | 35 |
0.0150 | 0.8024 | 3527 | 54 |
0.0200 | 0.7379 | 3592 | 74 |
0.0250 | 0.6929 | 3643 | 94 |
0.0300 | 0.6505 | 3685 | 114 |
0.0400 | 0.5843 | 3753 | 157 |
0.0500 | 0.5045 | 3806 | 201 |
0.0750 | 0.3345 | 3887 | 316 |
0.1000 | 0.2270 | 3934 | 438 |
+5 only | |||
0.0000 | 1.0000 | 114 | 0 |
0.0001 | 0.9993 | 215 | 0 |
0.0002 | 0.9986 | 237 | 0 |
0.0003 | 0.9979 | 254 | 0 |
0.0004 | 0.9972 | 266 | 0 |
0.0005 | 0.9967 | 277 | 0 |
0.0006 | 0.9964 | 286 | 0 |
0.0007 | 0.9958 | 295 | 0 |
0.0008 | 0.9945 | 303 | 0 |
0.0009 | 0.9938 | 309 | 0 |
0.0010 | 0.9933 | 315 | 0 |
0.0015 | 0.9891 | 335 | 1 |
0.0020 | 0.9843 | 349 | 1 |
0.0025 | 0.9814 | 361 | 1 |
0.0030 | 0.9768 | 371 | 1 |
0.0040 | 0.9655 | 386 | 2 |
0.0050 | 0.9574 | 397 | 2 |
0.0060 | 0.9471 | 406 | 3 |
0.0070 | 0.9397 | 414 | 3 |
0.0080 | 0.9328 | 421 | 4 |
0.0090 | 0.9279 | 428 | 4 |
0.0100 | 0.9250 | 434 | 4 |
0.0150 | 0.8868 | 459 | 7 |
0.0200 | 0.8509 | 477 | 10 |
0.0250 | 0.8133 | 491 | 13 |
0.0300 | 0.7563 | 502 | 16 |
0.0400 | 0.6664 | 517 | 22 |
0.0500 | 0.5944 | 528 | 28 |
0.0750 | 0.4366 | 544 | 45 |
0.1000 | 0.3051 | 554 | 62 |
peptideprophet | |
---|---|
time | 2017-02-20T13:48:56 |
author | AKeller@ISB |
est_tot_num_correct | 40824.9 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_36A.pep.xml |
database_refresh | |
time | 2017-02-20T13:48:45 |
interact | |
time | 2017-02-20T13:48:02 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_36A.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_36A.pep.xml |
tpp_models | |
time | Mon Feb 20 13:51:17 2017 |