---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.270.0390.4400.09
10.27 < nsp <= 0.860.0360.1640.22
20.86 < nsp <= 1.590.0580.0880.66
31.59 < nsp <= 2.590.0720.0760.94
42.59 < nsp <= 3.910.0880.0741.18
53.91 < nsp <= 5.510.1020.0581.76
65.51 < nsp <= 8.810.1260.0423.00
78.81 < nsp <= 14.870.1470.0275.44
814.87 < nsp <= 26.930.1590.0188.82
926.93 < nsp < inf0.1730.01313.60

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4280.00015650
0.990.6810.00024910
0.980.8340.00230547
0.970.8520.00331179
0.960.8650.003316411
0.950.8710.004318912
0.900.9030.006330520
0.800.9330.012341440
0.700.9550.019349467
0.600.9730.0283561103
0.500.9900.0413625154
0.401.0000.0503660194
0.301.0000.0503660194
0.201.0000.0503660194
0.101.0000.0503660194
0.001.0000.0503660194
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000015650
0.00160.988928765
0.00200.984629966
0.00260.975930868
0.00300.966431399
0.00400.9437321213
0.00500.9240326216
0.00610.9031330120
0.00700.8876333023
0.00800.8561335427
0.00900.8347337331
0.01000.8180339134
0.01500.7463345853
0.02000.6878350672
0.02510.6270354391
0.03000.58183572111
0.04000.50903621151
0.05010.44623659193

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra17379
num_input_3_spectra13691
num_input_4_spectra3375
num_input_5_spectra456
num_predicted_correct_prots3660.0
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_36A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_36A.pep.xml
total_no_spectrum_ids34561.7
program_details
analysisproteinprophet
time2017-02-20T13:51:09
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 13:51:17 2017




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