+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 21820.1 |
num_iterations | 27 |
prior_probability | 0.691 |
tot_num_spectra | 40414 |
Comet discrim score [fval] negmean: -1.99 | |
pos model | gaussian (mean 2.97, stdev 2.08) |
neg model | gaussian (mean -0.90, stdev 1.09) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.001, ntt=2 0.999) |
neg model | (ntt=0 0.001, ntt=1 0.024, ntt=2 0.975) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.941, 1<=nmc<=2 0.059, nmc>=3 0.000) |
neg model | (nmc=0 0.495, 1<=nmc<=2 0.503, nmc>=3 0.001) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.029, 0 0.862, 1 0.101, 2 0.008, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.311, 0 0.323, 1 0.161, 2 0.114, 3 0.091) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 16366.5 |
num_iterations | 27 |
prior_probability | 0.608 |
tot_num_spectra | 36656 |
Comet discrim score [fval] negmean: -1.59 | |
pos model | gaussian (mean 4.04, stdev 2.46) |
neg model | gaussian (mean -0.53, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.020, ntt=2 0.980) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.830, 1<=nmc<=2 0.170, nmc>=3 0.000) |
neg model | (nmc=0 0.295, 1<=nmc<=2 0.697, nmc>=3 0.008) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.022, 0 0.772, 1 0.152, 2 0.047, 3 0.007) |
neg model | (-3 0.000, -2 0.000, -1 0.240, 0 0.224, 1 0.201, 2 0.175, 3 0.160) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 3267.3 |
num_iterations | 27 |
prior_probability | 0.514 |
tot_num_spectra | 9303 |
Comet discrim score [fval] negmean: -2.05 | |
pos model | gaussian (mean 1.90, stdev 1.52) |
neg model | gaussian (mean -1.24, stdev 0.81) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.028, ntt=2 0.972) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.676, 1<=nmc<=2 0.324, nmc>=3 0.000) |
neg model | (nmc=0 0.173, 1<=nmc<=2 0.808, nmc>=3 0.019) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.017, 0 0.782, 1 0.156, 2 0.040, 3 0.005) |
neg model | (-3 0.000, -2 0.000, -1 0.224, 0 0.224, 1 0.201, 2 0.184, 3 0.168) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 404.8 |
num_iterations | 26 |
prior_probability | 0.341 |
tot_num_spectra | 2006 |
Comet discrim score [fval] negmean: -2.93 | |
pos model | gaussian (mean 1.88, stdev 1.49) |
neg model | gaussian (mean -1.81, stdev 1.12) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.023, ntt=2 0.977) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.548, 1<=nmc<=2 0.452, nmc>=3 0.000) |
neg model | (nmc=0 0.123, 1<=nmc<=2 0.851, nmc>=3 0.026) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.006, 0 0.843, 1 0.145, 2 0.005, 3 0.001) |
neg model | (-3 0.000, -2 0.000, -1 0.210, 0 0.177, 1 0.209, 2 0.219, 3 0.184) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010862 |
pos_bandwidth | 0.010862 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_3A | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_3A |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T13:55:23 (id: 1) |
database_refresh | 2017-02-20T13:55:12 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5435 | 0.0000 | 22750 | 0 |
0.9990 | 0.6307 | 0.0001 | 26401 | 2 |
0.9900 | 0.7377 | 0.0007 | 30879 | 20 |
0.9800 | 0.7749 | 0.0013 | 32437 | 43 |
0.9500 | 0.8278 | 0.0034 | 34651 | 119 |
0.9000 | 0.8717 | 0.0072 | 36488 | 263 |
0.8500 | 0.8990 | 0.0111 | 37632 | 423 |
0.8000 | 0.9180 | 0.0151 | 38427 | 590 |
0.7500 | 0.9338 | 0.0196 | 39088 | 781 |
0.7000 | 0.9470 | 0.0244 | 39639 | 990 |
0.6500 | 0.9542 | 0.0276 | 39942 | 1134 |
0.6000 | 0.9605 | 0.0311 | 40206 | 1292 |
0.5500 | 0.9658 | 0.0348 | 40428 | 1456 |
0.5000 | 0.9701 | 0.0383 | 40608 | 1618 |
0.4500 | 0.9734 | 0.0416 | 40745 | 1771 |
0.4000 | 0.9770 | 0.0461 | 40898 | 1976 |
0.3500 | 0.9799 | 0.0504 | 41018 | 2175 |
0.3000 | 0.9828 | 0.0557 | 41137 | 2425 |
0.2500 | 0.9858 | 0.0627 | 41264 | 2760 |
0.2000 | 0.9888 | 0.0716 | 41388 | 3190 |
0.1500 | 0.9917 | 0.0835 | 41512 | 3782 |
0.1000 | 0.9945 | 0.0998 | 41630 | 4613 |
0.0500 | 0.9974 | 0.1279 | 41748 | 6125 |
0.0000 | 1.0000 | 0.5264 | 41859 | 46520 |
+2 only | ||||
0.9999 | 0.5127 | 0.0000 | 11187 | 0 |
0.9990 | 0.6118 | 0.0001 | 13349 | 1 |
0.9900 | 0.7313 | 0.0007 | 15956 | 12 |
0.9800 | 0.7722 | 0.0015 | 16849 | 25 |
0.9500 | 0.8298 | 0.0037 | 18107 | 68 |
0.9000 | 0.8771 | 0.0077 | 19137 | 149 |
0.8500 | 0.9059 | 0.0118 | 19766 | 237 |
0.8000 | 0.9258 | 0.0160 | 20202 | 328 |
0.7500 | 0.9408 | 0.0201 | 20529 | 422 |
0.7000 | 0.9532 | 0.0246 | 20800 | 524 |
0.6500 | 0.9613 | 0.0282 | 20975 | 608 |
0.6000 | 0.9674 | 0.0315 | 21108 | 688 |
0.5500 | 0.9722 | 0.0348 | 21214 | 765 |
0.5000 | 0.9759 | 0.0378 | 21293 | 837 |
0.4500 | 0.9784 | 0.0404 | 21349 | 899 |
0.4000 | 0.9815 | 0.0441 | 21416 | 989 |
0.3500 | 0.9839 | 0.0477 | 21468 | 1074 |
0.3000 | 0.9860 | 0.0516 | 21514 | 1170 |
0.2500 | 0.9883 | 0.0571 | 21565 | 1306 |
0.2000 | 0.9904 | 0.0635 | 21611 | 1465 |
0.1500 | 0.9929 | 0.0738 | 21666 | 1725 |
0.1000 | 0.9954 | 0.0886 | 21720 | 2112 |
0.0500 | 0.9980 | 0.1144 | 21776 | 2814 |
0.0000 | 1.0000 | 0.4601 | 21820 | 18594 |
+3 only | ||||
0.9999 | 0.5935 | 0.0000 | 9713 | 0 |
0.9990 | 0.6636 | 0.0001 | 10860 | 1 |
0.9900 | 0.7508 | 0.0005 | 12288 | 6 |
0.9800 | 0.7828 | 0.0011 | 12812 | 14 |
0.9500 | 0.8295 | 0.0030 | 13576 | 40 |
0.9000 | 0.8691 | 0.0064 | 14224 | 91 |
0.8500 | 0.8954 | 0.0102 | 14655 | 152 |
0.8000 | 0.9136 | 0.0141 | 14952 | 214 |
0.7500 | 0.9302 | 0.0189 | 15224 | 293 |
0.7000 | 0.9450 | 0.0243 | 15466 | 385 |
0.6500 | 0.9508 | 0.0269 | 15561 | 430 |
0.6000 | 0.9569 | 0.0304 | 15662 | 490 |
0.5500 | 0.9620 | 0.0339 | 15745 | 553 |
0.5000 | 0.9667 | 0.0378 | 15822 | 622 |
0.4500 | 0.9703 | 0.0415 | 15881 | 687 |
0.4000 | 0.9741 | 0.0461 | 15942 | 771 |
0.3500 | 0.9770 | 0.0505 | 15991 | 851 |
0.3000 | 0.9805 | 0.0569 | 16047 | 968 |
0.2500 | 0.9842 | 0.0655 | 16108 | 1129 |
0.2000 | 0.9878 | 0.0762 | 16167 | 1333 |
0.1500 | 0.9911 | 0.0891 | 16220 | 1587 |
0.1000 | 0.9939 | 0.1056 | 16267 | 1921 |
0.0500 | 0.9970 | 0.1358 | 16317 | 2564 |
0.0000 | 1.0000 | 0.5535 | 16367 | 20289 |
+4 only | ||||
0.9999 | 0.5209 | 0.0000 | 1702 | 0 |
0.9990 | 0.6099 | 0.0001 | 1993 | 0 |
0.9900 | 0.7276 | 0.0007 | 2377 | 2 |
0.9800 | 0.7650 | 0.0014 | 2499 | 4 |
0.9500 | 0.8135 | 0.0033 | 2658 | 9 |
0.9000 | 0.8544 | 0.0069 | 2792 | 19 |
0.8500 | 0.8781 | 0.0104 | 2869 | 30 |
0.8000 | 0.8942 | 0.0139 | 2922 | 41 |
0.7500 | 0.9106 | 0.0188 | 2975 | 57 |
0.7000 | 0.9201 | 0.0223 | 3006 | 69 |
0.6500 | 0.9284 | 0.0262 | 3033 | 82 |
0.6000 | 0.9370 | 0.0312 | 3061 | 99 |
0.5500 | 0.9460 | 0.0374 | 3091 | 120 |
0.5000 | 0.9518 | 0.0422 | 3110 | 137 |
0.4500 | 0.9576 | 0.0481 | 3129 | 158 |
0.4000 | 0.9646 | 0.0564 | 3152 | 188 |
0.3500 | 0.9698 | 0.0640 | 3169 | 216 |
0.3000 | 0.9746 | 0.0727 | 3184 | 250 |
0.2500 | 0.9785 | 0.0813 | 3197 | 283 |
0.2000 | 0.9837 | 0.0962 | 3214 | 342 |
0.1500 | 0.9881 | 0.1130 | 3229 | 411 |
0.1000 | 0.9925 | 0.1357 | 3243 | 509 |
0.0500 | 0.9957 | 0.1654 | 3253 | 645 |
0.0000 | 1.0000 | 0.6488 | 3267 | 6036 |
+5 only | ||||
0.9999 | 0.3656 | 0.0000 | 148 | 0 |
0.9990 | 0.4916 | 0.0001 | 199 | 0 |
0.9900 | 0.6368 | 0.0010 | 258 | 0 |
0.9800 | 0.6829 | 0.0021 | 276 | 1 |
0.9500 | 0.7664 | 0.0057 | 310 | 2 |
0.9000 | 0.8282 | 0.0111 | 335 | 4 |
0.8500 | 0.8435 | 0.0132 | 341 | 5 |
0.8000 | 0.8681 | 0.0185 | 351 | 7 |
0.7500 | 0.8889 | 0.0249 | 360 | 9 |
0.7000 | 0.9068 | 0.0315 | 367 | 12 |
0.6500 | 0.9202 | 0.0375 | 372 | 15 |
0.6000 | 0.9249 | 0.0400 | 374 | 16 |
0.5500 | 0.9335 | 0.0458 | 378 | 18 |
0.5000 | 0.9451 | 0.0554 | 383 | 22 |
0.4500 | 0.9544 | 0.0646 | 386 | 27 |
0.4000 | 0.9575 | 0.0684 | 388 | 28 |
0.3500 | 0.9649 | 0.0788 | 391 | 33 |
0.3000 | 0.9689 | 0.0858 | 392 | 37 |
0.2500 | 0.9737 | 0.0960 | 394 | 42 |
0.2000 | 0.9793 | 0.1112 | 396 | 50 |
0.1500 | 0.9835 | 0.1270 | 398 | 58 |
0.1000 | 0.9880 | 0.1509 | 400 | 71 |
0.0500 | 0.9939 | 0.2018 | 402 | 102 |
0.0000 | 1.0000 | 0.7982 | 405 | 1601 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 7431 | 0 |
0.0001 | 0.9986 | 26999 | 3 |
0.0002 | 0.9970 | 28417 | 6 |
0.0003 | 0.9954 | 29239 | 9 |
0.0004 | 0.9940 | 29842 | 12 |
0.0005 | 0.9923 | 30312 | 15 |
0.0006 | 0.9908 | 30697 | 18 |
0.0007 | 0.9893 | 31024 | 22 |
0.0008 | 0.9878 | 31313 | 25 |
0.0009 | 0.9862 | 31569 | 28 |
0.0010 | 0.9847 | 31799 | 32 |
0.0015 | 0.9778 | 32712 | 49 |
0.0020 | 0.9702 | 33377 | 67 |
0.0025 | 0.9631 | 33906 | 85 |
0.0030 | 0.9559 | 34344 | 103 |
0.0040 | 0.9417 | 35042 | 141 |
0.0050 | 0.9281 | 35588 | 179 |
0.0060 | 0.9152 | 36044 | 218 |
0.0070 | 0.9018 | 36435 | 257 |
0.0080 | 0.8896 | 36776 | 297 |
0.0090 | 0.8780 | 37082 | 337 |
0.0100 | 0.8654 | 37358 | 378 |
0.0150 | 0.8015 | 38408 | 585 |
0.0200 | 0.7454 | 39142 | 799 |
0.0250 | 0.6905 | 39706 | 1018 |
0.0300 | 0.6150 | 40127 | 1242 |
0.0400 | 0.4734 | 40681 | 1696 |
0.0500 | 0.3540 | 41009 | 2159 |
0.0750 | 0.1825 | 41428 | 3361 |
0.1000 | 0.0992 | 41632 | 4627 |
+2 only | |||
0.0000 | 1.0000 | 3868 | 0 |
0.0001 | 0.9988 | 13518 | 1 |
0.0002 | 0.9974 | 14356 | 3 |
0.0003 | 0.9960 | 14847 | 4 |
0.0004 | 0.9948 | 15198 | 6 |
0.0005 | 0.9933 | 15478 | 8 |
0.0006 | 0.9918 | 15704 | 9 |
0.0007 | 0.9904 | 15893 | 11 |
0.0008 | 0.9891 | 16060 | 13 |
0.0009 | 0.9880 | 16210 | 15 |
0.0010 | 0.9865 | 16346 | 16 |
0.0015 | 0.9796 | 16873 | 25 |
0.0020 | 0.9727 | 17254 | 35 |
0.0025 | 0.9667 | 17556 | 44 |
0.0030 | 0.9599 | 17808 | 54 |
0.0040 | 0.9463 | 18209 | 73 |
0.0050 | 0.9335 | 18522 | 93 |
0.0060 | 0.9211 | 18781 | 113 |
0.0070 | 0.9080 | 19000 | 134 |
0.0080 | 0.8961 | 19192 | 155 |
0.0090 | 0.8853 | 19364 | 176 |
0.0100 | 0.8747 | 19521 | 197 |
0.0150 | 0.8122 | 20112 | 307 |
0.0200 | 0.7525 | 20520 | 419 |
0.0250 | 0.6930 | 20823 | 535 |
0.0300 | 0.6263 | 21051 | 652 |
0.0400 | 0.4569 | 21342 | 890 |
0.0500 | 0.3187 | 21497 | 1133 |
0.0750 | 0.1456 | 21671 | 1759 |
0.1000 | 0.0749 | 21749 | 2418 |
+3 only | |||
0.0000 | 1.0000 | 2945 | 0 |
0.0001 | 0.9982 | 11212 | 1 |
0.0002 | 0.9961 | 11655 | 2 |
0.0003 | 0.9943 | 11915 | 4 |
0.0004 | 0.9924 | 12107 | 5 |
0.0005 | 0.9904 | 12257 | 6 |
0.0006 | 0.9887 | 12380 | 7 |
0.0007 | 0.9866 | 12483 | 9 |
0.0008 | 0.9850 | 12576 | 10 |
0.0009 | 0.9834 | 12659 | 11 |
0.0010 | 0.9821 | 12734 | 13 |
0.0015 | 0.9735 | 13041 | 20 |
0.0020 | 0.9654 | 13264 | 27 |
0.0025 | 0.9574 | 13443 | 34 |
0.0030 | 0.9493 | 13590 | 41 |
0.0040 | 0.9335 | 13826 | 56 |
0.0050 | 0.9198 | 14015 | 71 |
0.0060 | 0.9061 | 14175 | 86 |
0.0070 | 0.8919 | 14310 | 101 |
0.0080 | 0.8790 | 14430 | 116 |
0.0090 | 0.8668 | 14538 | 132 |
0.0100 | 0.8534 | 14634 | 148 |
0.0150 | 0.7911 | 15009 | 229 |
0.0200 | 0.7385 | 15281 | 312 |
0.0250 | 0.6900 | 15496 | 398 |
0.0300 | 0.6051 | 15653 | 484 |
0.0400 | 0.4674 | 15859 | 661 |
0.0500 | 0.3554 | 15986 | 842 |
0.0750 | 0.2063 | 16161 | 1311 |
0.1000 | 0.1147 | 16254 | 1807 |
+4 only | |||
0.0000 | 1.0000 | 554 | 0 |
0.0001 | 0.9987 | 2038 | 0 |
0.0002 | 0.9973 | 2154 | 0 |
0.0003 | 0.9958 | 2223 | 1 |
0.0004 | 0.9943 | 2272 | 1 |
0.0005 | 0.9929 | 2311 | 1 |
0.0006 | 0.9917 | 2343 | 1 |
0.0007 | 0.9905 | 2371 | 2 |
0.0008 | 0.9889 | 2396 | 2 |
0.0009 | 0.9877 | 2418 | 2 |
0.0010 | 0.9861 | 2438 | 2 |
0.0015 | 0.9790 | 2513 | 4 |
0.0020 | 0.9709 | 2567 | 5 |
0.0025 | 0.9628 | 2607 | 7 |
0.0030 | 0.9549 | 2640 | 8 |
0.0040 | 0.9393 | 2692 | 11 |
0.0050 | 0.9256 | 2733 | 14 |
0.0060 | 0.9124 | 2766 | 17 |
0.0070 | 0.8986 | 2795 | 20 |
0.0080 | 0.8884 | 2821 | 23 |
0.0090 | 0.8744 | 2844 | 26 |
0.0100 | 0.8604 | 2864 | 29 |
0.0150 | 0.7850 | 2936 | 45 |
0.0200 | 0.7330 | 2988 | 61 |
0.0250 | 0.6636 | 3027 | 78 |
0.0300 | 0.6068 | 3056 | 95 |
0.0400 | 0.5277 | 3102 | 130 |
0.0500 | 0.4425 | 3135 | 166 |
0.0750 | 0.2851 | 3188 | 260 |
0.1000 | 0.1851 | 3218 | 359 |
+5 only | |||
0.0000 | 1.0000 | 70 | 0 |
0.0001 | 0.9992 | 192 | 0 |
0.0002 | 0.9983 | 213 | 0 |
0.0003 | 0.9974 | 225 | 0 |
0.0004 | 0.9961 | 234 | 0 |
0.0005 | 0.9950 | 240 | 0 |
0.0006 | 0.9943 | 245 | 0 |
0.0007 | 0.9932 | 249 | 0 |
0.0008 | 0.9920 | 253 | 0 |
0.0009 | 0.9918 | 256 | 0 |
0.0010 | 0.9893 | 260 | 0 |
0.0015 | 0.9825 | 270 | 0 |
0.0020 | 0.9800 | 277 | 1 |
0.0025 | 0.9748 | 284 | 1 |
0.0030 | 0.9700 | 290 | 1 |
0.0040 | 0.9611 | 299 | 1 |
0.0050 | 0.9543 | 306 | 2 |
0.0060 | 0.9469 | 313 | 2 |
0.0070 | 0.9342 | 319 | 2 |
0.0080 | 0.9263 | 324 | 3 |
0.0090 | 0.9217 | 329 | 3 |
0.0100 | 0.9094 | 333 | 3 |
0.0150 | 0.8397 | 346 | 6 |
0.0200 | 0.7761 | 355 | 7 |
0.0250 | 0.7422 | 361 | 10 |
0.0300 | 0.7139 | 366 | 12 |
0.0400 | 0.6225 | 375 | 16 |
0.0500 | 0.5139 | 381 | 21 |
0.0750 | 0.3687 | 390 | 33 |
0.1000 | 0.2376 | 395 | 45 |
peptideprophet | |
---|---|
time | 2017-02-20T13:55:23 |
author | AKeller@ISB |
est_tot_num_correct | 41858.7 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_3A.pep.xml |
database_refresh | |
time | 2017-02-20T13:55:12 |
interact | |
time | 2017-02-20T13:54:33 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_3A.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_3A.pep.xml |
tpp_models | |
time | Mon Feb 20 13:57:49 2017 |