---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.250.0400.3090.13
10.25 < nsp <= 0.840.0340.1370.25
20.84 < nsp <= 1.570.0580.1320.44
31.57 < nsp <= 2.520.0750.1660.45
42.52 < nsp <= 3.860.0900.0990.91
53.86 < nsp <= 5.660.1060.0611.73
65.66 < nsp <= 8.640.1270.0432.97
78.64 < nsp <= 14.730.1470.0285.19
814.73 < nsp <= 28.980.1600.01411.41
928.98 < nsp < inf0.1630.01016.31

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4070.00015030
0.990.8120.00129964
0.980.8530.00231477
0.970.8670.00232008
0.960.8780.00332399
0.950.8860.003327011
0.900.9140.006337119
0.800.9440.011348238
0.700.9670.018356766
0.600.9880.0293645108
0.501.0000.0373690142
0.401.0000.0373690142
0.301.0000.0373690142
0.201.0000.0373690142
0.101.0000.0373690142
0.001.0000.0373690142
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000015030
0.00010.994524750
0.00120.992328733
0.00160.989330235
0.00200.981831386
0.00250.969232068
0.00300.9569325410
0.00400.9345331313
0.00500.9091335517
0.00600.8892338721
0.00700.8682341424
0.00810.8452343628
0.00910.8259345432
0.01010.8144347235
0.01500.7403353554
0.02000.6824358273
0.02520.6338362193
0.03010.59113652113

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra17269
num_input_3_spectra14012
num_input_4_spectra3458
num_input_5_spectra472
num_predicted_correct_prots3689.9
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_40.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_40.pep.xml
total_no_spectrum_ids34861.4
program_details
analysisproteinprophet
time2017-02-20T14:07:20
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters8
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 14:07:29 2017




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