+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 14190.5 |
num_iterations | 28 |
prior_probability | 0.412 |
tot_num_spectra | 53897 |
Comet discrim score [fval] negmean: -2.14 | |
pos model | gaussian (mean 2.41, stdev 2.12) |
neg model | gaussian (mean -1.12, stdev 1.02) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.001, ntt=1 0.023, ntt=2 0.976) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.932, 1<=nmc<=2 0.068, nmc>=3 0.000) |
neg model | (nmc=0 0.519, 1<=nmc<=2 0.480, nmc>=3 0.001) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.039, 0 0.858, 1 0.096, 2 0.007, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.287, 0 0.310, 1 0.180, 2 0.124, 3 0.099) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 6100.9 |
num_iterations | 27 |
prior_probability | 0.390 |
tot_num_spectra | 25238 |
Comet discrim score [fval] negmean: -1.66 | |
pos model | gaussian (mean 3.87, stdev 2.37) |
neg model | gaussian (mean -0.60, stdev 1.06) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.022, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.770, 1<=nmc<=2 0.230, nmc>=3 0.000) |
neg model | (nmc=0 0.288, 1<=nmc<=2 0.704, nmc>=3 0.008) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.021, 0 0.764, 1 0.159, 2 0.049, 3 0.007) |
neg model | (-3 0.000, -2 0.000, -1 0.231, 0 0.226, 1 0.201, 2 0.175, 3 0.167) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 898.8 |
num_iterations | 27 |
prior_probability | 0.271 |
tot_num_spectra | 5735 |
Comet discrim score [fval] negmean: -2.04 | |
pos model | gaussian (mean 1.78, stdev 1.45) |
neg model | gaussian (mean -1.21, stdev 0.83) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.001, ntt=1 0.023, ntt=2 0.977) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.572, 1<=nmc<=2 0.428, nmc>=3 0.000) |
neg model | (nmc=0 0.192, 1<=nmc<=2 0.790, nmc>=3 0.018) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.018, 0 0.794, 1 0.149, 2 0.029, 3 0.010) |
neg model | (-3 0.000, -2 0.000, -1 0.216, 0 0.217, 1 0.203, 2 0.194, 3 0.169) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 76.9 |
num_iterations | 29 |
prior_probability | 0.094 |
tot_num_spectra | 1609 |
Comet discrim score [fval] negmean: -2.86 | |
pos model | gaussian (mean 1.61, stdev 1.53) |
neg model | gaussian (mean -1.71, stdev 1.15) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.027, ntt=2 0.973) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.362, 1<=nmc<=2 0.637, nmc>=3 0.001) |
neg model | (nmc=0 0.166, 1<=nmc<=2 0.806, nmc>=3 0.028) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.037, 0 0.868, 1 0.074, 2 0.016, 3 0.004) |
neg model | (-3 0.000, -2 0.000, -1 0.210, 0 0.213, 1 0.198, 2 0.190, 3 0.189) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010679 |
pos_bandwidth | 0.010679 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_43 | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_43 |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T14:10:40 (id: 1) |
database_refresh | 2017-02-20T14:10:29 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.4613 | 0.0000 | 9811 | 0 |
0.9990 | 0.5457 | 0.0001 | 11605 | 1 |
0.9900 | 0.6539 | 0.0007 | 13906 | 10 |
0.9800 | 0.6887 | 0.0015 | 14647 | 21 |
0.9500 | 0.7429 | 0.0038 | 15800 | 61 |
0.9000 | 0.7890 | 0.0082 | 16779 | 138 |
0.8500 | 0.8187 | 0.0129 | 17411 | 227 |
0.8000 | 0.8421 | 0.0182 | 17908 | 332 |
0.7500 | 0.8620 | 0.0242 | 18332 | 455 |
0.7000 | 0.8798 | 0.0310 | 18711 | 599 |
0.6500 | 0.8968 | 0.0390 | 19073 | 774 |
0.6000 | 0.9118 | 0.0474 | 19391 | 964 |
0.5500 | 0.9247 | 0.0561 | 19666 | 1168 |
0.5000 | 0.9377 | 0.0663 | 19941 | 1417 |
0.4500 | 0.9454 | 0.0736 | 20105 | 1598 |
0.4000 | 0.9514 | 0.0806 | 20234 | 1774 |
0.3500 | 0.9571 | 0.0884 | 20354 | 1975 |
0.3000 | 0.9621 | 0.0969 | 20461 | 2196 |
0.2500 | 0.9674 | 0.1081 | 20574 | 2494 |
0.2000 | 0.9733 | 0.1241 | 20700 | 2933 |
0.1500 | 0.9792 | 0.1447 | 20825 | 3522 |
0.1000 | 0.9854 | 0.1759 | 20956 | 4472 |
0.0500 | 0.9924 | 0.2327 | 21106 | 6401 |
0.0000 | 1.0000 | 0.7541 | 21267 | 65212 |
+2 only | ||||
0.9999 | 0.4296 | 0.0000 | 6097 | 0 |
0.9990 | 0.5187 | 0.0001 | 7360 | 1 |
0.9900 | 0.6308 | 0.0008 | 8952 | 7 |
0.9800 | 0.6681 | 0.0016 | 9481 | 15 |
0.9500 | 0.7266 | 0.0042 | 10311 | 44 |
0.9000 | 0.7771 | 0.0090 | 11028 | 100 |
0.8500 | 0.8087 | 0.0140 | 11476 | 163 |
0.8000 | 0.8339 | 0.0197 | 11833 | 238 |
0.7500 | 0.8554 | 0.0263 | 12139 | 327 |
0.7000 | 0.8753 | 0.0338 | 12421 | 434 |
0.6500 | 0.8934 | 0.0422 | 12678 | 559 |
0.6000 | 0.9098 | 0.0513 | 12910 | 698 |
0.5500 | 0.9237 | 0.0605 | 13108 | 844 |
0.5000 | 0.9383 | 0.0719 | 13315 | 1031 |
0.4500 | 0.9459 | 0.0790 | 13423 | 1151 |
0.4000 | 0.9524 | 0.0863 | 13515 | 1277 |
0.3500 | 0.9580 | 0.0939 | 13594 | 1408 |
0.3000 | 0.9628 | 0.1020 | 13663 | 1552 |
0.2500 | 0.9678 | 0.1124 | 13734 | 1738 |
0.2000 | 0.9738 | 0.1283 | 13819 | 2034 |
0.1500 | 0.9795 | 0.1479 | 13899 | 2412 |
0.1000 | 0.9852 | 0.1764 | 13980 | 2995 |
0.0500 | 0.9926 | 0.2358 | 14085 | 4347 |
0.0000 | 1.0000 | 0.7367 | 14191 | 39706 |
+3 only | ||||
0.9999 | 0.5471 | 0.0000 | 3338 | 0 |
0.9990 | 0.6205 | 0.0001 | 3786 | 0 |
0.9900 | 0.7149 | 0.0006 | 4361 | 3 |
0.9800 | 0.7433 | 0.0011 | 4535 | 5 |
0.9500 | 0.7888 | 0.0030 | 4812 | 15 |
0.9000 | 0.8240 | 0.0063 | 5027 | 32 |
0.8500 | 0.8481 | 0.0100 | 5174 | 53 |
0.8000 | 0.8678 | 0.0144 | 5294 | 78 |
0.7500 | 0.8841 | 0.0193 | 5394 | 106 |
0.7000 | 0.8953 | 0.0237 | 5462 | 133 |
0.6500 | 0.9101 | 0.0307 | 5552 | 176 |
0.6000 | 0.9223 | 0.0378 | 5627 | 221 |
0.5500 | 0.9331 | 0.0452 | 5693 | 269 |
0.5000 | 0.9416 | 0.0522 | 5745 | 316 |
0.4500 | 0.9492 | 0.0597 | 5791 | 368 |
0.4000 | 0.9541 | 0.0655 | 5821 | 408 |
0.3500 | 0.9590 | 0.0725 | 5851 | 457 |
0.3000 | 0.9635 | 0.0805 | 5878 | 515 |
0.2500 | 0.9692 | 0.0931 | 5913 | 607 |
0.2000 | 0.9746 | 0.1084 | 5946 | 723 |
0.1500 | 0.9803 | 0.1292 | 5981 | 887 |
0.1000 | 0.9872 | 0.1648 | 6023 | 1188 |
0.0500 | 0.9929 | 0.2129 | 6057 | 1639 |
0.0000 | 1.0000 | 0.7583 | 6101 | 19137 |
+4 only | ||||
0.9999 | 0.4039 | 0.0000 | 363 | 0 |
0.9990 | 0.4895 | 0.0001 | 440 | 0 |
0.9900 | 0.6291 | 0.0010 | 565 | 1 |
0.9800 | 0.6664 | 0.0017 | 599 | 1 |
0.9500 | 0.7128 | 0.0037 | 641 | 2 |
0.9000 | 0.7602 | 0.0083 | 683 | 6 |
0.8500 | 0.7934 | 0.0137 | 713 | 10 |
0.8000 | 0.8135 | 0.0185 | 731 | 14 |
0.7500 | 0.8333 | 0.0248 | 749 | 19 |
0.7000 | 0.8624 | 0.0360 | 775 | 29 |
0.6500 | 0.8774 | 0.0430 | 789 | 35 |
0.6000 | 0.8878 | 0.0490 | 798 | 41 |
0.5500 | 0.8999 | 0.0573 | 809 | 49 |
0.5000 | 0.9158 | 0.0700 | 823 | 62 |
0.4500 | 0.9232 | 0.0770 | 830 | 69 |
0.4000 | 0.9289 | 0.0836 | 835 | 76 |
0.3500 | 0.9389 | 0.0975 | 844 | 91 |
0.3000 | 0.9470 | 0.1115 | 851 | 107 |
0.2500 | 0.9543 | 0.1266 | 858 | 124 |
0.2000 | 0.9620 | 0.1465 | 865 | 148 |
0.1500 | 0.9712 | 0.1773 | 873 | 188 |
0.1000 | 0.9794 | 0.2155 | 880 | 242 |
0.0500 | 0.9887 | 0.2833 | 889 | 351 |
0.0000 | 1.0000 | 0.8433 | 899 | 4836 |
+5 only | ||||
0.9999 | 0.1690 | 0.0000 | 13 | 0 |
0.9990 | 0.2470 | 0.0002 | 19 | 0 |
0.9900 | 0.3506 | 0.0010 | 27 | 0 |
0.9800 | 0.4147 | 0.0031 | 32 | 0 |
0.9500 | 0.4649 | 0.0066 | 36 | 0 |
0.9000 | 0.5255 | 0.0140 | 40 | 1 |
0.8500 | 0.6161 | 0.0328 | 47 | 2 |
0.8000 | 0.6481 | 0.0413 | 50 | 2 |
0.7500 | 0.6578 | 0.0452 | 51 | 2 |
0.7000 | 0.6862 | 0.0574 | 53 | 3 |
0.6500 | 0.7038 | 0.0666 | 54 | 4 |
0.6000 | 0.7198 | 0.0771 | 55 | 5 |
0.5500 | 0.7350 | 0.0880 | 57 | 5 |
0.5000 | 0.7622 | 0.1117 | 59 | 7 |
0.4500 | 0.7929 | 0.1409 | 61 | 10 |
0.4000 | 0.8204 | 0.1696 | 63 | 13 |
0.3500 | 0.8592 | 0.2132 | 66 | 18 |
0.3000 | 0.8884 | 0.2490 | 68 | 23 |
0.2500 | 0.8988 | 0.2644 | 69 | 25 |
0.2000 | 0.9107 | 0.2852 | 70 | 28 |
0.1500 | 0.9312 | 0.3306 | 72 | 35 |
0.1000 | 0.9506 | 0.3907 | 73 | 47 |
0.0500 | 0.9700 | 0.4632 | 75 | 64 |
0.0000 | 1.0000 | 0.9522 | 77 | 1532 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 3788 | 0 |
0.0001 | 0.9987 | 11797 | 1 |
0.0002 | 0.9974 | 12499 | 3 |
0.0003 | 0.9961 | 12922 | 4 |
0.0004 | 0.9947 | 13231 | 5 |
0.0005 | 0.9933 | 13474 | 7 |
0.0006 | 0.9918 | 13670 | 8 |
0.0007 | 0.9906 | 13838 | 10 |
0.0008 | 0.9892 | 13986 | 11 |
0.0009 | 0.9878 | 14117 | 13 |
0.0010 | 0.9863 | 14234 | 14 |
0.0015 | 0.9792 | 14685 | 22 |
0.0020 | 0.9727 | 15011 | 30 |
0.0025 | 0.9664 | 15272 | 38 |
0.0030 | 0.9605 | 15493 | 47 |
0.0040 | 0.9479 | 15851 | 64 |
0.0050 | 0.9360 | 16135 | 81 |
0.0060 | 0.9242 | 16372 | 99 |
0.0070 | 0.9127 | 16575 | 117 |
0.0080 | 0.9021 | 16754 | 135 |
0.0090 | 0.8896 | 16914 | 154 |
0.0100 | 0.8793 | 17057 | 172 |
0.0150 | 0.8301 | 17628 | 269 |
0.0200 | 0.7833 | 18048 | 369 |
0.0250 | 0.7431 | 18381 | 472 |
0.0300 | 0.7063 | 18659 | 578 |
0.0400 | 0.6427 | 19116 | 797 |
0.0500 | 0.5839 | 19480 | 1026 |
0.0750 | 0.4380 | 20133 | 1633 |
0.1000 | 0.2860 | 20495 | 2278 |
+2 only | |||
0.0000 | 1.0000 | 2525 | 0 |
0.0001 | 0.9989 | 7418 | 1 |
0.0002 | 0.9976 | 7919 | 2 |
0.0003 | 0.9964 | 8215 | 2 |
0.0004 | 0.9952 | 8429 | 3 |
0.0005 | 0.9939 | 8598 | 4 |
0.0006 | 0.9925 | 8735 | 5 |
0.0007 | 0.9912 | 8851 | 6 |
0.0008 | 0.9900 | 8953 | 7 |
0.0009 | 0.9888 | 9044 | 8 |
0.0010 | 0.9874 | 9126 | 9 |
0.0015 | 0.9810 | 9440 | 14 |
0.0020 | 0.9748 | 9670 | 19 |
0.0025 | 0.9690 | 9853 | 25 |
0.0030 | 0.9636 | 10008 | 30 |
0.0040 | 0.9530 | 10266 | 41 |
0.0050 | 0.9416 | 10468 | 53 |
0.0060 | 0.9310 | 10639 | 64 |
0.0070 | 0.9195 | 10786 | 76 |
0.0080 | 0.9092 | 10915 | 88 |
0.0090 | 0.8997 | 11031 | 100 |
0.0100 | 0.8890 | 11135 | 113 |
0.0150 | 0.8414 | 11546 | 176 |
0.0200 | 0.7964 | 11848 | 242 |
0.0250 | 0.7583 | 12086 | 310 |
0.0300 | 0.7242 | 12287 | 380 |
0.0400 | 0.6625 | 12617 | 526 |
0.0500 | 0.6072 | 12881 | 679 |
0.0750 | 0.4768 | 13366 | 1084 |
0.1000 | 0.3138 | 13648 | 1517 |
+3 only | |||
0.0000 | 1.0000 | 1092 | 0 |
0.0001 | 0.9983 | 3899 | 0 |
0.0002 | 0.9966 | 4068 | 1 |
0.0003 | 0.9950 | 4175 | 1 |
0.0004 | 0.9934 | 4253 | 2 |
0.0005 | 0.9915 | 4314 | 2 |
0.0006 | 0.9899 | 4363 | 3 |
0.0007 | 0.9883 | 4406 | 3 |
0.0008 | 0.9865 | 4443 | 4 |
0.0009 | 0.9844 | 4475 | 4 |
0.0010 | 0.9826 | 4503 | 5 |
0.0015 | 0.9741 | 4612 | 7 |
0.0020 | 0.9666 | 4693 | 9 |
0.0025 | 0.9574 | 4757 | 12 |
0.0030 | 0.9506 | 4809 | 15 |
0.0040 | 0.9339 | 4894 | 20 |
0.0050 | 0.9188 | 4961 | 25 |
0.0060 | 0.9049 | 5017 | 30 |
0.0070 | 0.8867 | 5063 | 36 |
0.0080 | 0.8763 | 5104 | 41 |
0.0090 | 0.8663 | 5140 | 47 |
0.0100 | 0.8501 | 5174 | 53 |
0.0150 | 0.7942 | 5309 | 81 |
0.0200 | 0.7378 | 5407 | 111 |
0.0250 | 0.6921 | 5482 | 141 |
0.0300 | 0.6544 | 5545 | 172 |
0.0400 | 0.5856 | 5649 | 236 |
0.0500 | 0.5167 | 5731 | 302 |
0.0750 | 0.3338 | 5860 | 476 |
0.1000 | 0.2231 | 5929 | 660 |
+4 only | |||
0.0000 | 1.0000 | 162 | 0 |
0.0001 | 0.9988 | 447 | 0 |
0.0002 | 0.9979 | 478 | 0 |
0.0003 | 0.9969 | 499 | 0 |
0.0004 | 0.9961 | 515 | 0 |
0.0005 | 0.9949 | 529 | 0 |
0.0006 | 0.9937 | 539 | 0 |
0.0007 | 0.9924 | 548 | 0 |
0.0008 | 0.9912 | 555 | 0 |
0.0009 | 0.9904 | 561 | 1 |
0.0010 | 0.9895 | 567 | 1 |
0.0015 | 0.9843 | 592 | 1 |
0.0020 | 0.9771 | 609 | 1 |
0.0025 | 0.9691 | 620 | 2 |
0.0030 | 0.9636 | 630 | 2 |
0.0040 | 0.9472 | 645 | 3 |
0.0050 | 0.9360 | 657 | 3 |
0.0060 | 0.9263 | 666 | 4 |
0.0070 | 0.9165 | 675 | 5 |
0.0080 | 0.9021 | 682 | 6 |
0.0090 | 0.8960 | 690 | 6 |
0.0100 | 0.8853 | 695 | 7 |
0.0150 | 0.8351 | 720 | 11 |
0.0200 | 0.7821 | 737 | 15 |
0.0250 | 0.7481 | 750 | 20 |
0.0300 | 0.7280 | 763 | 24 |
0.0400 | 0.6723 | 784 | 33 |
0.0500 | 0.5988 | 800 | 43 |
0.0750 | 0.4658 | 829 | 68 |
0.1000 | 0.3333 | 846 | 95 |
+5 only | |||
0.0000 | 0.9997 | 15 | 0 |
0.0001 | 0.9993 | 19 | 0 |
0.0002 | 0.9986 | 21 | 0 |
0.0003 | 0.9984 | 23 | 0 |
0.0004 | 0.9984 | 24 | 0 |
0.0005 | 0.9962 | 26 | 0 |
0.0006 | 0.9962 | 26 | 0 |
0.0007 | 0.9956 | 27 | 0 |
0.0008 | 0.9916 | 28 | 0 |
0.0009 | 0.9916 | 28 | 0 |
0.0010 | 0.9916 | 28 | 0 |
0.0015 | 0.9863 | 30 | 0 |
0.0020 | 0.9863 | 31 | 0 |
0.0025 | 0.9862 | 32 | 0 |
0.0030 | 0.9815 | 33 | 0 |
0.0040 | 0.9709 | 35 | 0 |
0.0050 | 0.9625 | 36 | 0 |
0.0060 | 0.9543 | 37 | 0 |
0.0070 | 0.9444 | 38 | 0 |
0.0080 | 0.9428 | 39 | 0 |
0.0090 | 0.9428 | 39 | 0 |
0.0100 | 0.9355 | 40 | 0 |
0.0150 | 0.8915 | 42 | 1 |
0.0200 | 0.8804 | 44 | 1 |
0.0250 | 0.8661 | 46 | 1 |
0.0300 | 0.8577 | 47 | 2 |
0.0400 | 0.8016 | 51 | 2 |
0.0500 | 0.7190 | 53 | 3 |
0.0750 | 0.6023 | 56 | 5 |
0.1000 | 0.5149 | 59 | 7 |
peptideprophet | |
---|---|
time | 2017-02-20T14:10:40 |
author | AKeller@ISB |
est_tot_num_correct | 21267.2 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_43.pep.xml |
database_refresh | |
time | 2017-02-20T14:10:29 |
interact | |
time | 2017-02-20T14:09:50 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_43.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_43.pep.xml |
tpp_models | |
time | Mon Feb 20 14:12:14 2017 |