---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.120.0610.4790.13
10.12 < nsp <= 0.480.0300.1530.20
20.48 < nsp <= 0.900.0410.0430.96
30.90 < nsp <= 1.330.0750.0481.57
41.33 < nsp <= 2.000.0880.0581.52 (1.57)
52.00 < nsp <= 3.000.0910.0581.56 (1.57)
63.00 < nsp <= 4.870.1270.0592.15
74.87 < nsp <= 8.360.1600.0463.49
88.36 < nsp <= 18.970.1720.0315.60
918.97 < nsp < inf0.1560.0265.91

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.3990.00010610
0.990.7850.00220874
0.980.8300.00222085
0.970.8510.00322637
0.960.8630.00322958
0.950.8700.00423159
0.900.9000.006239615
0.800.9340.012248531
0.700.9580.020254951
0.600.9820.032261386
0.501.0000.0442660123
0.401.0000.0442660123
0.301.0000.0442660123
0.201.0000.0442660123
0.101.0000.0442660123
0.001.0000.0442660123
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000010610
0.00150.992219993
0.00170.991420664
0.00200.987521394
0.00250.979122146
0.00300.970122637
0.00400.946623239
0.00500.9256236012
0.00600.9073238714
0.00700.8909241017
0.00800.8688242920
0.00900.8518244622
0.01000.8382246025
0.01500.7567251338
0.02000.6986255052
0.02500.6595258066
0.03010.6136260581
0.04010.55462646111

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra11378
num_input_3_spectra4970
num_input_4_spectra652
num_input_5_spectra61
num_predicted_correct_prots2660.5
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_43A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_43A.pep.xml
total_no_spectrum_ids16875.2
program_details
analysisproteinprophet
time2017-02-20T14:09:46
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters3
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 14:09:50 2017




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