---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.290.0390.4120.09
10.29 < nsp <= 0.930.0370.1740.21
20.93 < nsp <= 1.660.0620.1120.55
31.66 < nsp <= 2.730.0800.0880.91
42.73 < nsp <= 4.020.0940.0691.36
54.02 < nsp <= 6.180.1050.0522.01
66.18 < nsp <= 9.860.1250.0373.34
79.86 < nsp <= 15.980.1450.0236.20
815.98 < nsp <= 31.240.1550.0188.78
931.24 < nsp < inf0.1590.01510.86

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4380.00017910
0.990.6930.00028350
0.980.8560.00235058
0.970.8740.003357510
0.960.8840.003361812
0.950.8940.004365813
0.900.9200.006376522
0.800.9460.010387241
0.700.9630.016394063
0.600.9800.0254011102
0.500.9940.0354067148
0.401.0000.0414092176
0.301.0000.0414092176
0.201.0000.0414092176
0.101.0000.0414092176
0.001.0000.0414092176
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000017910
0.00150.989432725
0.00210.985334387
0.00250.976035339
0.00300.9649359811
0.00400.9434368115
0.00500.9190373619
0.00600.8897377523
0.00710.8669380627
0.00800.8475382731
0.00900.8282384835
0.01000.8059386739
0.01500.7165393260
0.02000.6456397781
0.02520.59784013104
0.03000.54784042125
0.04010.46374088171

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra23782
num_input_3_spectra13772
num_input_4_spectra2588
num_input_5_spectra330
num_predicted_correct_prots4092.3
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_48A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_48A.pep.xml
total_no_spectrum_ids40113.7
program_details
analysisproteinprophet
time2017-02-20T14:21:39
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 14:21:48 2017




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