+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 20364.6 |
num_iterations | 27 |
prior_probability | 0.618 |
tot_num_spectra | 44953 |
Comet discrim score [fval] negmean: -2.15 | |
pos model | gaussian (mean 2.74, stdev 2.14) |
neg model | gaussian (mean -1.03, stdev 1.11) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.001, ntt=2 0.999) |
neg model | (ntt=0 0.000, ntt=1 0.024, ntt=2 0.976) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.946, 1<=nmc<=2 0.054, nmc>=3 0.000) |
neg model | (nmc=0 0.508, 1<=nmc<=2 0.491, nmc>=3 0.002) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.031, 0 0.859, 1 0.101, 2 0.008, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.304, 0 0.309, 1 0.169, 2 0.122, 3 0.097) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 12984.4 |
num_iterations | 26 |
prior_probability | 0.555 |
tot_num_spectra | 33385 |
Comet discrim score [fval] negmean: -1.66 | |
pos model | gaussian (mean 3.94, stdev 2.46) |
neg model | gaussian (mean -0.58, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.021, ntt=2 0.979) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.829, 1<=nmc<=2 0.171, nmc>=3 0.000) |
neg model | (nmc=0 0.293, 1<=nmc<=2 0.700, nmc>=3 0.007) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.024, 0 0.772, 1 0.154, 2 0.044, 3 0.006) |
neg model | (-3 0.000, -2 0.000, -1 0.233, 0 0.223, 1 0.197, 2 0.180, 3 0.167) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 2508.6 |
num_iterations | 26 |
prior_probability | 0.446 |
tot_num_spectra | 8505 |
Comet discrim score [fval] negmean: -2.03 | |
pos model | gaussian (mean 1.86, stdev 1.54) |
neg model | gaussian (mean -1.20, stdev 0.83) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.001, ntt=1 0.023, ntt=2 0.977) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.688, 1<=nmc<=2 0.312, nmc>=3 0.000) |
neg model | (nmc=0 0.192, 1<=nmc<=2 0.789, nmc>=3 0.019) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.022, 0 0.767, 1 0.164, 2 0.042, 3 0.005) |
neg model | (-3 0.000, -2 0.000, -1 0.227, 0 0.214, 1 0.201, 2 0.182, 3 0.175) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 265.5 |
num_iterations | 28 |
prior_probability | 0.234 |
tot_num_spectra | 2016 |
Comet discrim score [fval] negmean: -2.94 | |
pos model | gaussian (mean 1.88, stdev 1.56) |
neg model | gaussian (mean -1.76, stdev 1.18) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.031, ntt=2 0.969) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.558, 1<=nmc<=2 0.442, nmc>=3 0.000) |
neg model | (nmc=0 0.151, 1<=nmc<=2 0.828, nmc>=3 0.021) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.003, 0 0.841, 1 0.138, 2 0.017, 3 0.001) |
neg model | (-3 0.000, -2 0.000, -1 0.227, 0 0.194, 1 0.188, 2 0.205, 3 0.186) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010857 |
pos_bandwidth | 0.010857 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_51 | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_51 |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T14:36:06 (id: 1) |
database_refresh | 2017-02-20T14:35:54 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5047 | 0.0000 | 18231 | 0 |
0.9990 | 0.5941 | 0.0001 | 21462 | 2 |
0.9900 | 0.7091 | 0.0007 | 25616 | 19 |
0.9800 | 0.7476 | 0.0015 | 27007 | 39 |
0.9500 | 0.8033 | 0.0037 | 29016 | 109 |
0.9000 | 0.8499 | 0.0078 | 30700 | 241 |
0.8500 | 0.8807 | 0.0124 | 31815 | 399 |
0.8000 | 0.9038 | 0.0173 | 32648 | 574 |
0.7500 | 0.9211 | 0.0222 | 33271 | 755 |
0.7000 | 0.9360 | 0.0276 | 33810 | 959 |
0.6500 | 0.9469 | 0.0324 | 34203 | 1147 |
0.6000 | 0.9528 | 0.0357 | 34418 | 1276 |
0.5500 | 0.9575 | 0.0389 | 34587 | 1401 |
0.5000 | 0.9625 | 0.0430 | 34767 | 1564 |
0.4500 | 0.9669 | 0.0474 | 34927 | 1740 |
0.4000 | 0.9710 | 0.0524 | 35075 | 1940 |
0.3500 | 0.9747 | 0.0579 | 35210 | 2165 |
0.3000 | 0.9780 | 0.0640 | 35330 | 2415 |
0.2500 | 0.9818 | 0.0726 | 35466 | 2778 |
0.2000 | 0.9855 | 0.0833 | 35598 | 3236 |
0.1500 | 0.9892 | 0.0978 | 35732 | 3874 |
0.1000 | 0.9929 | 0.1186 | 35866 | 4824 |
0.0500 | 0.9964 | 0.1523 | 35993 | 6467 |
0.0000 | 1.0000 | 0.5935 | 36123 | 52736 |
+2 only | ||||
0.9999 | 0.4672 | 0.0000 | 9515 | 0 |
0.9990 | 0.5654 | 0.0001 | 11515 | 1 |
0.9900 | 0.6938 | 0.0008 | 14129 | 12 |
0.9800 | 0.7384 | 0.0017 | 15037 | 25 |
0.9500 | 0.7991 | 0.0041 | 16273 | 68 |
0.9000 | 0.8503 | 0.0085 | 17316 | 149 |
0.8500 | 0.8838 | 0.0135 | 17999 | 246 |
0.8000 | 0.9100 | 0.0189 | 18531 | 358 |
0.7500 | 0.9283 | 0.0240 | 18904 | 465 |
0.7000 | 0.9427 | 0.0292 | 19197 | 577 |
0.6500 | 0.9523 | 0.0334 | 19392 | 670 |
0.6000 | 0.9577 | 0.0364 | 19503 | 736 |
0.5500 | 0.9621 | 0.0393 | 19592 | 802 |
0.5000 | 0.9662 | 0.0427 | 19676 | 878 |
0.4500 | 0.9700 | 0.0465 | 19755 | 964 |
0.4000 | 0.9738 | 0.0511 | 19831 | 1068 |
0.3500 | 0.9772 | 0.0562 | 19901 | 1185 |
0.3000 | 0.9802 | 0.0616 | 19961 | 1310 |
0.2500 | 0.9833 | 0.0687 | 20024 | 1478 |
0.2000 | 0.9865 | 0.0784 | 20090 | 1708 |
0.1500 | 0.9899 | 0.0919 | 20160 | 2040 |
0.1000 | 0.9935 | 0.1121 | 20231 | 2554 |
0.0500 | 0.9970 | 0.1459 | 20303 | 3467 |
0.0000 | 1.0000 | 0.5470 | 20365 | 24588 |
+3 only | ||||
0.9999 | 0.5755 | 0.0000 | 7472 | 0 |
0.9990 | 0.6508 | 0.0001 | 8450 | 1 |
0.9900 | 0.7413 | 0.0006 | 9625 | 5 |
0.9800 | 0.7706 | 0.0011 | 10006 | 11 |
0.9500 | 0.8178 | 0.0030 | 10619 | 32 |
0.9000 | 0.8566 | 0.0064 | 11123 | 72 |
0.8500 | 0.8840 | 0.0106 | 11478 | 122 |
0.8000 | 0.9025 | 0.0146 | 11718 | 174 |
0.7500 | 0.9184 | 0.0192 | 11925 | 234 |
0.7000 | 0.9344 | 0.0252 | 12133 | 313 |
0.6500 | 0.9472 | 0.0309 | 12299 | 392 |
0.6000 | 0.9526 | 0.0339 | 12369 | 435 |
0.5500 | 0.9567 | 0.0367 | 12422 | 473 |
0.5000 | 0.9624 | 0.0414 | 12496 | 540 |
0.4500 | 0.9669 | 0.0460 | 12555 | 605 |
0.4000 | 0.9710 | 0.0509 | 12607 | 677 |
0.3500 | 0.9746 | 0.0563 | 12655 | 755 |
0.3000 | 0.9780 | 0.0625 | 12699 | 846 |
0.2500 | 0.9821 | 0.0718 | 12752 | 986 |
0.2000 | 0.9856 | 0.0823 | 12798 | 1147 |
0.1500 | 0.9892 | 0.0963 | 12844 | 1369 |
0.1000 | 0.9928 | 0.1162 | 12891 | 1694 |
0.0500 | 0.9961 | 0.1483 | 12934 | 2252 |
0.0000 | 1.0000 | 0.6111 | 12984 | 20401 |
+4 only | ||||
0.9999 | 0.4668 | 0.0000 | 1171 | 0 |
0.9990 | 0.5529 | 0.0001 | 1387 | 0 |
0.9900 | 0.6826 | 0.0009 | 1712 | 2 |
0.9800 | 0.7184 | 0.0016 | 1802 | 3 |
0.9500 | 0.7765 | 0.0041 | 1948 | 8 |
0.9000 | 0.8246 | 0.0083 | 2069 | 17 |
0.8500 | 0.8512 | 0.0123 | 2135 | 27 |
0.8000 | 0.8733 | 0.0171 | 2191 | 38 |
0.7500 | 0.8889 | 0.0216 | 2230 | 49 |
0.7000 | 0.9010 | 0.0262 | 2260 | 61 |
0.6500 | 0.9115 | 0.0311 | 2287 | 73 |
0.6000 | 0.9225 | 0.0374 | 2314 | 90 |
0.5500 | 0.9321 | 0.0440 | 2338 | 108 |
0.5000 | 0.9401 | 0.0506 | 2358 | 126 |
0.4500 | 0.9476 | 0.0581 | 2377 | 147 |
0.4000 | 0.9539 | 0.0656 | 2393 | 168 |
0.3500 | 0.9603 | 0.0749 | 2409 | 195 |
0.3000 | 0.9654 | 0.0837 | 2422 | 221 |
0.2500 | 0.9725 | 0.0994 | 2440 | 269 |
0.2000 | 0.9784 | 0.1155 | 2454 | 321 |
0.1500 | 0.9844 | 0.1371 | 2470 | 392 |
0.1000 | 0.9900 | 0.1652 | 2483 | 492 |
0.0500 | 0.9943 | 0.2021 | 2494 | 632 |
0.0000 | 1.0000 | 0.7050 | 2509 | 5996 |
+5 only | ||||
0.9999 | 0.2749 | 0.0000 | 73 | 0 |
0.9990 | 0.4142 | 0.0002 | 110 | 0 |
0.9900 | 0.5643 | 0.0012 | 150 | 0 |
0.9800 | 0.6088 | 0.0021 | 162 | 0 |
0.9500 | 0.6635 | 0.0047 | 176 | 1 |
0.9000 | 0.7264 | 0.0109 | 193 | 2 |
0.8500 | 0.7661 | 0.0173 | 203 | 4 |
0.8000 | 0.7816 | 0.0211 | 208 | 4 |
0.7500 | 0.8020 | 0.0277 | 213 | 6 |
0.7000 | 0.8265 | 0.0375 | 219 | 9 |
0.6500 | 0.8495 | 0.0482 | 226 | 11 |
0.6000 | 0.8731 | 0.0614 | 232 | 15 |
0.5500 | 0.8861 | 0.0700 | 235 | 18 |
0.5000 | 0.8940 | 0.0764 | 237 | 20 |
0.4500 | 0.9067 | 0.0881 | 241 | 23 |
0.4000 | 0.9178 | 0.1007 | 244 | 27 |
0.3500 | 0.9237 | 0.1082 | 245 | 30 |
0.3000 | 0.9371 | 0.1300 | 249 | 37 |
0.2500 | 0.9462 | 0.1483 | 251 | 44 |
0.2000 | 0.9635 | 0.1904 | 256 | 60 |
0.1500 | 0.9737 | 0.2189 | 259 | 72 |
0.1000 | 0.9803 | 0.2455 | 260 | 85 |
0.0500 | 0.9890 | 0.3053 | 263 | 115 |
0.0000 | 1.0000 | 0.8683 | 266 | 1750 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 6498 | 0 |
0.0001 | 0.9987 | 21851 | 2 |
0.0002 | 0.9973 | 23105 | 5 |
0.0003 | 0.9959 | 23860 | 7 |
0.0004 | 0.9946 | 24407 | 10 |
0.0005 | 0.9932 | 24841 | 12 |
0.0006 | 0.9919 | 25202 | 15 |
0.0007 | 0.9906 | 25511 | 18 |
0.0008 | 0.9890 | 25779 | 21 |
0.0009 | 0.9877 | 26017 | 23 |
0.0010 | 0.9863 | 26231 | 26 |
0.0015 | 0.9792 | 27068 | 41 |
0.0020 | 0.9722 | 27667 | 55 |
0.0025 | 0.9657 | 28139 | 71 |
0.0030 | 0.9595 | 28532 | 86 |
0.0040 | 0.9465 | 29170 | 117 |
0.0050 | 0.9336 | 29676 | 149 |
0.0060 | 0.9222 | 30094 | 182 |
0.0070 | 0.9094 | 30454 | 215 |
0.0080 | 0.8978 | 30768 | 248 |
0.0090 | 0.8853 | 31046 | 282 |
0.0100 | 0.8755 | 31299 | 316 |
0.0150 | 0.8230 | 32294 | 492 |
0.0200 | 0.7725 | 33015 | 674 |
0.0250 | 0.7228 | 33569 | 861 |
0.0300 | 0.6776 | 34016 | 1052 |
0.0400 | 0.5376 | 34638 | 1444 |
0.0500 | 0.4212 | 35007 | 1844 |
0.0750 | 0.2365 | 35499 | 2879 |
0.1000 | 0.1450 | 35749 | 3973 |
+2 only | |||
0.0000 | 1.0000 | 3696 | 0 |
0.0001 | 0.9989 | 11596 | 1 |
0.0002 | 0.9977 | 12388 | 2 |
0.0003 | 0.9964 | 12862 | 4 |
0.0004 | 0.9953 | 13204 | 5 |
0.0005 | 0.9941 | 13477 | 7 |
0.0006 | 0.9929 | 13704 | 8 |
0.0007 | 0.9916 | 13897 | 10 |
0.0008 | 0.9905 | 14068 | 11 |
0.0009 | 0.9891 | 14218 | 13 |
0.0010 | 0.9880 | 14353 | 14 |
0.0015 | 0.9821 | 14887 | 22 |
0.0020 | 0.9758 | 15273 | 31 |
0.0025 | 0.9697 | 15574 | 39 |
0.0030 | 0.9638 | 15824 | 48 |
0.0040 | 0.9518 | 16225 | 65 |
0.0050 | 0.9409 | 16541 | 83 |
0.0060 | 0.9288 | 16802 | 102 |
0.0070 | 0.9175 | 17026 | 120 |
0.0080 | 0.9061 | 17221 | 139 |
0.0090 | 0.8947 | 17394 | 158 |
0.0100 | 0.8836 | 17549 | 177 |
0.0150 | 0.8368 | 18164 | 277 |
0.0200 | 0.7910 | 18618 | 380 |
0.0250 | 0.7408 | 18966 | 487 |
0.0300 | 0.6909 | 19240 | 596 |
0.0400 | 0.5397 | 19611 | 818 |
0.0500 | 0.4082 | 19814 | 1044 |
0.0750 | 0.2145 | 20069 | 1629 |
0.1000 | 0.1264 | 20192 | 2245 |
+3 only | |||
0.0000 | 1.0000 | 2284 | 0 |
0.0001 | 0.9982 | 8704 | 1 |
0.0002 | 0.9964 | 9070 | 2 |
0.0003 | 0.9945 | 9290 | 3 |
0.0004 | 0.9928 | 9446 | 4 |
0.0005 | 0.9910 | 9570 | 5 |
0.0006 | 0.9892 | 9671 | 6 |
0.0007 | 0.9873 | 9757 | 7 |
0.0008 | 0.9855 | 9832 | 8 |
0.0009 | 0.9835 | 9899 | 9 |
0.0010 | 0.9818 | 9958 | 10 |
0.0015 | 0.9731 | 10190 | 15 |
0.0020 | 0.9643 | 10359 | 21 |
0.0025 | 0.9575 | 10496 | 26 |
0.0030 | 0.9505 | 10614 | 32 |
0.0040 | 0.9344 | 10801 | 43 |
0.0050 | 0.9209 | 10950 | 55 |
0.0060 | 0.9059 | 11076 | 67 |
0.0070 | 0.8934 | 11183 | 79 |
0.0080 | 0.8804 | 11278 | 91 |
0.0090 | 0.8671 | 11363 | 103 |
0.0100 | 0.8557 | 11439 | 116 |
0.0150 | 0.7939 | 11739 | 179 |
0.0200 | 0.7417 | 11956 | 244 |
0.0250 | 0.7014 | 12129 | 311 |
0.0300 | 0.6617 | 12275 | 380 |
0.0400 | 0.5153 | 12475 | 521 |
0.0500 | 0.4074 | 12599 | 664 |
0.0750 | 0.2338 | 12767 | 1037 |
0.1000 | 0.1434 | 12854 | 1430 |
+4 only | |||
0.0000 | 1.0000 | 471 | 0 |
0.0001 | 0.9987 | 1410 | 0 |
0.0002 | 0.9975 | 1494 | 0 |
0.0003 | 0.9963 | 1549 | 0 |
0.0004 | 0.9951 | 1587 | 1 |
0.0005 | 0.9942 | 1620 | 1 |
0.0006 | 0.9933 | 1649 | 1 |
0.0007 | 0.9921 | 1673 | 1 |
0.0008 | 0.9911 | 1695 | 1 |
0.0009 | 0.9899 | 1714 | 2 |
0.0010 | 0.9880 | 1732 | 2 |
0.0015 | 0.9819 | 1795 | 3 |
0.0020 | 0.9740 | 1839 | 4 |
0.0025 | 0.9685 | 1873 | 5 |
0.0030 | 0.9615 | 1901 | 6 |
0.0040 | 0.9505 | 1946 | 8 |
0.0050 | 0.9400 | 1983 | 10 |
0.0060 | 0.9286 | 2015 | 12 |
0.0070 | 0.9150 | 2041 | 14 |
0.0080 | 0.9021 | 2064 | 17 |
0.0090 | 0.8913 | 2084 | 19 |
0.0100 | 0.8805 | 2102 | 21 |
0.0150 | 0.8218 | 2170 | 33 |
0.0200 | 0.7732 | 2218 | 46 |
0.0250 | 0.7090 | 2254 | 58 |
0.0300 | 0.6623 | 2282 | 71 |
0.0400 | 0.5808 | 2325 | 98 |
0.0500 | 0.5034 | 2357 | 125 |
0.0750 | 0.3492 | 2410 | 196 |
0.1000 | 0.2471 | 2441 | 272 |
+5 only | |||
0.0000 | 1.0000 | 53 | 0 |
0.0001 | 0.9995 | 102 | 0 |
0.0002 | 0.9987 | 116 | 0 |
0.0003 | 0.9981 | 124 | 0 |
0.0004 | 0.9970 | 130 | 0 |
0.0005 | 0.9966 | 135 | 0 |
0.0006 | 0.9959 | 139 | 0 |
0.0007 | 0.9939 | 142 | 0 |
0.0008 | 0.9926 | 145 | 0 |
0.0009 | 0.9919 | 147 | 0 |
0.0010 | 0.9910 | 149 | 0 |
0.0015 | 0.9859 | 157 | 0 |
0.0020 | 0.9833 | 162 | 0 |
0.0025 | 0.9723 | 167 | 0 |
0.0030 | 0.9697 | 169 | 1 |
0.0040 | 0.9606 | 174 | 1 |
0.0050 | 0.9474 | 178 | 1 |
0.0060 | 0.9412 | 182 | 1 |
0.0070 | 0.9343 | 185 | 1 |
0.0080 | 0.9253 | 187 | 2 |
0.0090 | 0.9158 | 190 | 2 |
0.0100 | 0.9079 | 192 | 2 |
0.0150 | 0.8682 | 202 | 3 |
0.0200 | 0.8121 | 208 | 4 |
0.0250 | 0.7667 | 212 | 6 |
0.0300 | 0.7335 | 216 | 7 |
0.0400 | 0.6835 | 222 | 10 |
0.0500 | 0.6458 | 228 | 12 |
0.0750 | 0.5042 | 238 | 20 |
0.1000 | 0.4092 | 244 | 28 |
peptideprophet | |
---|---|
time | 2017-02-20T14:36:06 |
author | AKeller@ISB |
est_tot_num_correct | 36123.1 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_51.pep.xml |
database_refresh | |
time | 2017-02-20T14:35:54 |
interact | |
time | 2017-02-20T14:35:14 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_51.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_51.pep.xml |
tpp_models | |
time | Mon Feb 20 14:38:17 2017 |