---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.200.0410.4800.09
10.20 < nsp <= 0.750.0350.1880.19
20.75 < nsp <= 1.350.0550.0890.62
31.35 < nsp <= 2.220.0740.0561.33
42.22 < nsp <= 3.270.0880.0451.95
53.27 < nsp <= 4.990.1030.0442.34
64.99 < nsp <= 7.920.1270.0413.07
77.92 < nsp <= 13.100.1490.0275.54
813.10 < nsp <= 25.930.1670.01710.08
925.93 < nsp < inf0.1600.01411.52

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4190.00015220
0.990.6690.00024310
0.980.8380.00330468
0.970.8580.003311910
0.960.8670.003315111
0.950.8780.004319113
0.900.9010.006327620
0.800.9330.012339340
0.700.9560.019347466
0.600.9750.0293544104
0.500.9900.0403599149
0.401.0000.0503635192
0.301.0000.0503635192
0.201.0000.0503635192
0.101.0000.0503635192
0.001.0000.0503635192
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000015220
0.00010.990624310
0.00180.988528585
0.00210.987429246
0.00250.982930288
0.00300.974031059
0.00400.9502319113
0.00500.9214324516
0.00600.8990327920
0.00700.8784330823
0.00800.8560333127
0.00910.8380335231
0.01000.8256336834
0.01500.7455343752
0.02010.6879348571
0.02510.6342352191
0.03000.58133552110
0.04010.49843600150
0.05010.43493635192

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra19012
num_input_3_spectra11285
num_input_4_spectra2012
num_input_5_spectra230
num_predicted_correct_prots3635.3
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_52A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_52A.pep.xml
total_no_spectrum_ids32230.9
program_details
analysisproteinprophet
time2017-02-20T14:41:23
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters5
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 14:41:30 2017




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