+1 Models | |
---|---|
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: 1.00 | |
pos model | gaussian (mean 2.00, stdev 0.40) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+2 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 23477.1 |
num_iterations | 27 |
prior_probability | 0.691 |
tot_num_spectra | 43545 |
Comet discrim score [fval] negmean: -2.02 | |
pos model | gaussian (mean 2.96, stdev 2.10) |
neg model | gaussian (mean -0.91, stdev 1.11) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.022, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.938, 1<=nmc<=2 0.062, nmc>=3 0.000) |
neg model | (nmc=0 0.491, 1<=nmc<=2 0.507, nmc>=3 0.002) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.031, 0 0.855, 1 0.104, 2 0.009, 3 0.000) |
neg model | (-3 0.000, -2 0.000, -1 0.306, 0 0.318, 1 0.160, 2 0.114, 3 0.102) |
+3 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 16450.7 |
num_iterations | 27 |
prior_probability | 0.596 |
tot_num_spectra | 37816 |
Comet discrim score [fval] negmean: -1.60 | |
pos model | gaussian (mean 4.02, stdev 2.49) |
neg model | gaussian (mean -0.53, stdev 1.07) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.019, ntt=2 0.981) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.825, 1<=nmc<=2 0.175, nmc>=3 0.000) |
neg model | (nmc=0 0.287, 1<=nmc<=2 0.705, nmc>=3 0.009) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.024, 0 0.768, 1 0.156, 2 0.045, 3 0.007) |
neg model | (-3 0.000, -2 0.000, -1 0.242, 0 0.224, 1 0.197, 2 0.176, 3 0.161) |
+4 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 3333.6 |
num_iterations | 26 |
prior_probability | 0.514 |
tot_num_spectra | 9429 |
Comet discrim score [fval] negmean: -2.05 | |
pos model | gaussian (mean 1.92, stdev 1.50) |
neg model | gaussian (mean -1.24, stdev 0.80) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.022, ntt=2 0.978) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.689, 1<=nmc<=2 0.311, nmc>=3 0.000) |
neg model | (nmc=0 0.188, 1<=nmc<=2 0.793, nmc>=3 0.018) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.019, 0 0.770, 1 0.167, 2 0.037, 3 0.006) |
neg model | (-3 0.000, -2 0.000, -1 0.234, 0 0.220, 1 0.191, 2 0.182, 3 0.171) |
+5 Models | |
comments | using no. tolerable trypsin term. [ntt] 0 data as pseudonegatives |
est_tot_correct | 468.5 |
num_iterations | 27 |
prior_probability | 0.348 |
tot_num_spectra | 2223 |
Comet discrim score [fval] negmean: -2.93 | |
pos model | gaussian (mean 1.80, stdev 1.53) |
neg model | gaussian (mean -1.79, stdev 1.14) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.000, ntt=1 0.000, ntt=2 1.000) |
neg model | (ntt=0 0.000, ntt=1 0.024, ntt=2 0.976) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.568, 1<=nmc<=2 0.431, nmc>=3 0.000) |
neg model | (nmc=0 0.143, 1<=nmc<=2 0.831, nmc>=3 0.026) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.000, -2 0.000, -1 0.015, 0 0.808, 1 0.165, 2 0.011, 3 0.001) |
neg model | (-3 0.000, -2 0.000, -1 0.195, 0 0.188, 1 0.211, 2 0.207, 3 0.199) |
+6 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
+7 Models | |
comments | using training data negative distributions |
est_tot_correct | 0.0 |
num_iterations | 21 |
prior_probability | 0.000 |
tot_num_spectra | 0 |
Comet discrim score [fval] negmean: -5.00 | |
pos model | gaussian (mean 4.56, stdev 1.24) |
neg model | gaussian (mean 0.00, stdev 3.16) |
no. tolerable trypsin term. [ntt] | |
pos model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
neg model | (ntt=0 0.333, ntt=1 0.333, ntt=2 0.333) |
no. missed enz. cleavages [nmc] | |
pos model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
neg model | (nmc=0 0.333, 1<=nmc<=2 0.333, nmc>=3 0.333) |
Accurate Mass Model | |
neg_bandwidth | 0.010804 |
pos_bandwidth | 0.010804 |
isotopic peak mass difference [IsoMassDiff] | |
pos model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
neg model | (-3 0.143, -2 0.143, -1 0.143, 0 0.143, 1 0.143, 2 0.143, 3 0.143) |
MS run: /home/sean/Documents/proteome/20161205_Sample_8 | |
---|---|
msManufacturer | Thermo |
msModel | Orbitrap Fusion Lumos |
raw_data | .mzXML |
raw_data_type | raw |
sample_enzyme | |
name | trypsin |
specificity | cut: KR no_cut: P sense: C |
search_summary | |
base_name | /home/sean/Documents/proteome/20161205_Sample_8 |
fragment_mass_type | monoisotopic |
precursor_mass_type | monoisotopic |
search_engine | Comet |
search_engine_version | 2016.01 rev. 2 |
search_id | 1 |
search_database | |
local_path | Cg-Giga_cont_AA.fa |
type | AA |
enzymatic_search_constraint | |
enzyme | Trypsin |
max_num_internal_cleavages | 2 |
min_number_termini | 2 |
Aminoacid and Terminal Modifications | |
M | mass: 147.035385 massdiff: 15.994900 symbol: * variable: Y |
C | mass: 160.030649 massdiff: 57.021464 variable: N |
Search Parameters | |
# comet_version | 2016.01 rev. 0 |
activation_method | ALL |
add_A_alanine | 0.000000 |
add_B_user_amino_acid | 0.000000 |
add_C_cysteine | 57.021464 |
add_Cterm_peptide | 0.000000 |
add_Cterm_protein | 0.000000 |
add_D_aspartic_acid | 0.000000 |
add_E_glutamic_acid | 0.000000 |
add_F_phenylalanine | 0.000000 |
add_G_glycine | 0.000000 |
add_H_histidine | 0.000000 |
add_I_isoleucine | 0.000000 |
add_J_user_amino_acid | 0.000000 |
add_K_lysine | 0.000000 |
add_L_leucine | 0.000000 |
add_M_methionine | 0.000000 |
add_N_asparagine | 0.000000 |
add_Nterm_peptide | 0.000000 |
add_Nterm_protein | 0.000000 |
add_O_ornithine | 0.000000 |
add_P_proline | 0.000000 |
add_Q_glutamine | 0.000000 |
add_R_arginine | 0.000000 |
add_S_serine | 0.000000 |
add_T_threonine | 0.000000 |
add_U_celenocysteinee | 0.000000 |
add_V_valine | 0.000000 |
add_W_tryptophan | 0.000000 |
add_X_user_amino_acid | 0.000000 |
add_Y_tyrosine | 0.000000 |
add_Z_user_amino_acid | 0.000000 |
allowed_missed_cleavage | 2 |
clear_mz_range | 0.000000 0.000000 |
clip_nterm_methionine | 0 |
database_name | Cg-Giga_cont_AA.fa |
decoy_prefix | DECOY_ |
decoy_search | 1 |
digest_mass_range | 600.000000 5000.000000 |
fragment_bin_offset | 0.400000 |
fragment_bin_tol | 1.000500 |
isotope_error | 1 |
mass_offsets | |
mass_type_fragment | 1 |
mass_type_parent | 1 |
max_fragment_charge | 3 |
max_precursor_charge | 6 |
max_variable_mods_in_peptide | 5 |
minimum_intensity | 0 |
minimum_peaks | 10 |
ms_level | 2 |
nucleotide_reading_frame | 0 |
num_enzyme_termini | 2 |
num_output_lines | 5 |
num_results | 100 |
num_threads | 8 |
output_outfiles | 0 |
output_pepxmlfile | 1 |
output_percolatorfile | 0 |
output_sqtfile | 0 |
output_sqtstream | 0 |
output_suffix | |
output_txtfile | 0 |
override_charge | 0 |
peptide_mass_tolerance | 20.000000 |
peptide_mass_units | 2 |
precursor_charge | 0 0 |
precursor_tolerance_type | 1 |
print_expect_score | 1 |
remove_precursor_peak | 0 |
remove_precursor_tolerance | 1.500000 |
require_variable_mod | 0 |
sample_enzyme_number | 1 |
scan_range | 0 0 |
search_enzyme_number | 1 |
show_fragment_ions | 0 |
skip_researching | 1 |
spectrum_batch_size | 0 |
theoretical_fragment_ions | 1 |
use_A_ions | 0 |
use_B_ions | 1 |
use_C_ions | 0 |
use_NL_ions | 0 |
use_X_ions | 0 |
use_Y_ions | 1 |
use_Z_ions | 0 |
variable_mod01 | 15.994900 M 0 3 -1 0 0 |
variable_mod02 | 0.000000 X 0 3 -1 0 0 |
variable_mod03 | 0.000000 X 0 3 -1 0 0 |
variable_mod04 | 0.000000 X 0 3 -1 0 0 |
variable_mod05 | 0.000000 X 0 3 -1 0 0 |
variable_mod06 | 0.000000 X 0 3 -1 0 0 |
variable_mod07 | 0.000000 X 0 3 -1 0 0 |
variable_mod08 | 0.000000 X 0 3 -1 0 0 |
variable_mod09 | 0.000000 X 0 3 -1 0 0 |
Analysis Timestamps | |
peptideprophet | 2017-02-20T14:55:50 (id: 1) |
database_refresh | 2017-02-20T14:55:38 (id: 1) |
database | Cg-Giga_cont_AA.fa |
min_num_enz_term | 0 |
Predicted Sensitivity and Error Rate | ||||
min_prob | Sensitivity | Error_Rate | num_correct | num_incorrect |
---|---|---|---|---|
0.9999 | 0.5315 | 0.0000 | 23241 | 0 |
0.9990 | 0.6207 | 0.0001 | 27145 | 2 |
0.9900 | 0.7310 | 0.0007 | 31967 | 22 |
0.9800 | 0.7688 | 0.0014 | 33619 | 46 |
0.9500 | 0.8237 | 0.0036 | 36020 | 129 |
0.9000 | 0.8679 | 0.0074 | 37951 | 282 |
0.8500 | 0.8958 | 0.0115 | 39174 | 454 |
0.8000 | 0.9165 | 0.0158 | 40080 | 644 |
0.7500 | 0.9321 | 0.0202 | 40763 | 841 |
0.7000 | 0.9455 | 0.0250 | 41345 | 1062 |
0.6500 | 0.9538 | 0.0288 | 41708 | 1235 |
0.6000 | 0.9598 | 0.0321 | 41973 | 1393 |
0.5500 | 0.9644 | 0.0352 | 42173 | 1540 |
0.5000 | 0.9683 | 0.0385 | 42343 | 1693 |
0.4500 | 0.9721 | 0.0423 | 42510 | 1879 |
0.4000 | 0.9753 | 0.0463 | 42652 | 2071 |
0.3500 | 0.9786 | 0.0512 | 42794 | 2309 |
0.3000 | 0.9819 | 0.0574 | 42939 | 2612 |
0.2500 | 0.9850 | 0.0646 | 43075 | 2973 |
0.2000 | 0.9883 | 0.0743 | 43217 | 3469 |
0.1500 | 0.9914 | 0.0868 | 43354 | 4119 |
0.1000 | 0.9944 | 0.1040 | 43484 | 5049 |
0.0500 | 0.9972 | 0.1320 | 43606 | 6631 |
0.0000 | 1.0000 | 0.5299 | 43730 | 49283 |
+2 only | ||||
0.9999 | 0.5017 | 0.0000 | 11778 | 0 |
0.9990 | 0.6029 | 0.0001 | 14155 | 1 |
0.9900 | 0.7253 | 0.0008 | 17027 | 13 |
0.9800 | 0.7671 | 0.0015 | 18008 | 28 |
0.9500 | 0.8265 | 0.0039 | 19403 | 76 |
0.9000 | 0.8744 | 0.0080 | 20528 | 165 |
0.8500 | 0.9034 | 0.0122 | 21210 | 261 |
0.8000 | 0.9253 | 0.0167 | 21723 | 368 |
0.7500 | 0.9403 | 0.0208 | 22074 | 470 |
0.7000 | 0.9524 | 0.0251 | 22359 | 577 |
0.6500 | 0.9611 | 0.0290 | 22564 | 675 |
0.6000 | 0.9670 | 0.0322 | 22702 | 756 |
0.5500 | 0.9713 | 0.0352 | 22804 | 831 |
0.5000 | 0.9743 | 0.0376 | 22873 | 893 |
0.4500 | 0.9773 | 0.0407 | 22945 | 973 |
0.4000 | 0.9799 | 0.0439 | 23006 | 1055 |
0.3500 | 0.9825 | 0.0477 | 23066 | 1156 |
0.3000 | 0.9853 | 0.0530 | 23132 | 1295 |
0.2500 | 0.9878 | 0.0589 | 23191 | 1453 |
0.2000 | 0.9903 | 0.0664 | 23250 | 1653 |
0.1500 | 0.9929 | 0.0768 | 23310 | 1940 |
0.1000 | 0.9956 | 0.0928 | 23373 | 2392 |
0.0500 | 0.9978 | 0.1163 | 23426 | 3083 |
0.0000 | 1.0000 | 0.4609 | 23477 | 20068 |
+3 only | ||||
0.9999 | 0.5805 | 0.0000 | 9550 | 0 |
0.9990 | 0.6507 | 0.0001 | 10704 | 1 |
0.9900 | 0.7437 | 0.0006 | 12235 | 7 |
0.9800 | 0.7763 | 0.0012 | 12770 | 15 |
0.9500 | 0.8245 | 0.0031 | 13564 | 42 |
0.9000 | 0.8633 | 0.0064 | 14202 | 92 |
0.8500 | 0.8897 | 0.0103 | 14635 | 153 |
0.8000 | 0.9094 | 0.0146 | 14961 | 221 |
0.7500 | 0.9267 | 0.0195 | 15245 | 304 |
0.7000 | 0.9420 | 0.0251 | 15497 | 400 |
0.6500 | 0.9492 | 0.0284 | 15615 | 456 |
0.6000 | 0.9550 | 0.0316 | 15710 | 513 |
0.5500 | 0.9593 | 0.0346 | 15781 | 565 |
0.5000 | 0.9638 | 0.0383 | 15855 | 632 |
0.4500 | 0.9681 | 0.0427 | 15926 | 711 |
0.4000 | 0.9716 | 0.0471 | 15984 | 789 |
0.3500 | 0.9753 | 0.0526 | 16045 | 891 |
0.3000 | 0.9792 | 0.0599 | 16109 | 1026 |
0.2500 | 0.9826 | 0.0677 | 16165 | 1173 |
0.2000 | 0.9868 | 0.0802 | 16234 | 1416 |
0.1500 | 0.9905 | 0.0946 | 16294 | 1702 |
0.1000 | 0.9934 | 0.1114 | 16343 | 2048 |
0.0500 | 0.9966 | 0.1428 | 16395 | 2731 |
0.0000 | 1.0000 | 0.5650 | 16451 | 21365 |
+4 only | ||||
0.9999 | 0.5267 | 0.0000 | 1756 | 0 |
0.9990 | 0.6239 | 0.0001 | 2080 | 0 |
0.9900 | 0.7269 | 0.0007 | 2423 | 2 |
0.9800 | 0.7595 | 0.0013 | 2532 | 3 |
0.9500 | 0.8155 | 0.0034 | 2719 | 9 |
0.9000 | 0.8582 | 0.0073 | 2861 | 21 |
0.8500 | 0.8844 | 0.0113 | 2948 | 34 |
0.8000 | 0.9011 | 0.0148 | 3004 | 45 |
0.7500 | 0.9132 | 0.0183 | 3044 | 57 |
0.7000 | 0.9236 | 0.0223 | 3079 | 70 |
0.6500 | 0.9329 | 0.0266 | 3110 | 85 |
0.6000 | 0.9413 | 0.0315 | 3138 | 102 |
0.5500 | 0.9479 | 0.0360 | 3160 | 118 |
0.5000 | 0.9542 | 0.0413 | 3181 | 137 |
0.4500 | 0.9599 | 0.0470 | 3200 | 158 |
0.4000 | 0.9655 | 0.0539 | 3219 | 183 |
0.3500 | 0.9709 | 0.0618 | 3237 | 213 |
0.3000 | 0.9746 | 0.0685 | 3249 | 239 |
0.2500 | 0.9797 | 0.0800 | 3266 | 284 |
0.2000 | 0.9834 | 0.0908 | 3278 | 328 |
0.1500 | 0.9874 | 0.1063 | 3292 | 391 |
0.1000 | 0.9919 | 0.1312 | 3307 | 499 |
0.0500 | 0.9956 | 0.1655 | 3319 | 658 |
0.0000 | 1.0000 | 0.6465 | 3334 | 6095 |
+5 only | ||||
0.9999 | 0.3351 | 0.0000 | 157 | 0 |
0.9990 | 0.4396 | 0.0001 | 206 | 0 |
0.9900 | 0.6012 | 0.0012 | 282 | 0 |
0.9800 | 0.6580 | 0.0023 | 308 | 1 |
0.9500 | 0.7137 | 0.0048 | 334 | 2 |
0.9000 | 0.7691 | 0.0100 | 360 | 4 |
0.8500 | 0.8123 | 0.0166 | 381 | 6 |
0.8000 | 0.8388 | 0.0224 | 393 | 9 |
0.7500 | 0.8520 | 0.0264 | 399 | 11 |
0.7000 | 0.8751 | 0.0353 | 410 | 15 |
0.6500 | 0.8938 | 0.0439 | 419 | 19 |
0.6000 | 0.9031 | 0.0491 | 423 | 22 |
0.5500 | 0.9141 | 0.0567 | 428 | 26 |
0.5000 | 0.9261 | 0.0668 | 434 | 31 |
0.4500 | 0.9372 | 0.0775 | 439 | 37 |
0.4000 | 0.9473 | 0.0886 | 444 | 43 |
0.3500 | 0.9536 | 0.0973 | 447 | 48 |
0.3000 | 0.9578 | 0.1043 | 449 | 52 |
0.2500 | 0.9665 | 0.1224 | 453 | 63 |
0.2000 | 0.9716 | 0.1362 | 455 | 72 |
0.1500 | 0.9780 | 0.1577 | 458 | 86 |
0.1000 | 0.9851 | 0.1917 | 462 | 109 |
0.0500 | 0.9932 | 0.2554 | 465 | 160 |
0.0000 | 1.0000 | 0.7892 | 469 | 1754 |
Error Table | |||
Error_Rate | min_prob | num_correct | num_incorrect |
---|---|---|---|
0.0000 | 1.0000 | 7826 | 0 |
0.0001 | 0.9986 | 27709 | 3 |
0.0002 | 0.9971 | 29200 | 6 |
0.0003 | 0.9956 | 30086 | 9 |
0.0004 | 0.9941 | 30727 | 12 |
0.0005 | 0.9927 | 31232 | 16 |
0.0006 | 0.9913 | 31654 | 19 |
0.0007 | 0.9898 | 32012 | 22 |
0.0008 | 0.9882 | 32323 | 26 |
0.0009 | 0.9866 | 32596 | 29 |
0.0010 | 0.9852 | 32842 | 33 |
0.0015 | 0.9781 | 33821 | 51 |
0.0020 | 0.9712 | 34532 | 69 |
0.0025 | 0.9646 | 35096 | 88 |
0.0030 | 0.9575 | 35569 | 107 |
0.0040 | 0.9440 | 36323 | 146 |
0.0050 | 0.9296 | 36913 | 186 |
0.0060 | 0.9169 | 37398 | 226 |
0.0070 | 0.9045 | 37814 | 267 |
0.0080 | 0.8922 | 38180 | 308 |
0.0090 | 0.8797 | 38504 | 350 |
0.0100 | 0.8678 | 38797 | 392 |
0.0150 | 0.8100 | 39935 | 608 |
0.0200 | 0.7532 | 40734 | 832 |
0.0250 | 0.7005 | 41342 | 1061 |
0.0300 | 0.6338 | 41812 | 1294 |
0.0400 | 0.4786 | 42414 | 1768 |
0.0500 | 0.3604 | 42762 | 2252 |
0.0750 | 0.1968 | 43227 | 3506 |
0.1000 | 0.1091 | 43458 | 4830 |
+2 only | |||
0.0000 | 1.0000 | 4195 | 0 |
0.0001 | 0.9988 | 14321 | 1 |
0.0002 | 0.9975 | 15220 | 3 |
0.0003 | 0.9961 | 15746 | 5 |
0.0004 | 0.9948 | 16127 | 6 |
0.0005 | 0.9935 | 16428 | 8 |
0.0006 | 0.9923 | 16680 | 10 |
0.0007 | 0.9910 | 16895 | 12 |
0.0008 | 0.9895 | 17082 | 14 |
0.0009 | 0.9880 | 17246 | 16 |
0.0010 | 0.9866 | 17393 | 17 |
0.0015 | 0.9805 | 17976 | 27 |
0.0020 | 0.9738 | 18398 | 37 |
0.0025 | 0.9670 | 18730 | 47 |
0.0030 | 0.9611 | 19005 | 57 |
0.0040 | 0.9482 | 19447 | 78 |
0.0050 | 0.9352 | 19794 | 100 |
0.0060 | 0.9227 | 20077 | 121 |
0.0070 | 0.9106 | 20320 | 143 |
0.0080 | 0.8996 | 20533 | 166 |
0.0090 | 0.8871 | 20723 | 188 |
0.0100 | 0.8756 | 20893 | 211 |
0.0150 | 0.8199 | 21552 | 329 |
0.0200 | 0.7623 | 22012 | 450 |
0.0250 | 0.7021 | 22351 | 574 |
0.0300 | 0.6400 | 22609 | 700 |
0.0400 | 0.4612 | 22931 | 956 |
0.0500 | 0.3261 | 23096 | 1217 |
0.0750 | 0.1567 | 23301 | 1890 |
0.1000 | 0.0804 | 23393 | 2601 |
+3 only | |||
0.0000 | 1.0000 | 2954 | 0 |
0.0001 | 0.9982 | 11038 | 1 |
0.0002 | 0.9965 | 11503 | 2 |
0.0003 | 0.9947 | 11786 | 4 |
0.0004 | 0.9929 | 11990 | 5 |
0.0005 | 0.9912 | 12151 | 6 |
0.0006 | 0.9894 | 12284 | 7 |
0.0007 | 0.9874 | 12394 | 9 |
0.0008 | 0.9858 | 12492 | 10 |
0.0009 | 0.9839 | 12579 | 11 |
0.0010 | 0.9825 | 12656 | 13 |
0.0015 | 0.9742 | 12968 | 20 |
0.0020 | 0.9664 | 13198 | 27 |
0.0025 | 0.9591 | 13383 | 34 |
0.0030 | 0.9517 | 13537 | 41 |
0.0040 | 0.9372 | 13786 | 55 |
0.0050 | 0.9220 | 13983 | 70 |
0.0060 | 0.9060 | 14143 | 86 |
0.0070 | 0.8935 | 14280 | 101 |
0.0080 | 0.8800 | 14402 | 116 |
0.0090 | 0.8676 | 14510 | 132 |
0.0100 | 0.8543 | 14607 | 148 |
0.0150 | 0.7950 | 14990 | 228 |
0.0200 | 0.7459 | 15269 | 312 |
0.0250 | 0.7017 | 15492 | 398 |
0.0300 | 0.6272 | 15666 | 485 |
0.0400 | 0.4764 | 15884 | 663 |
0.0500 | 0.3709 | 16018 | 844 |
0.0750 | 0.2174 | 16207 | 1316 |
0.1000 | 0.1299 | 16313 | 1813 |
+4 only | |||
0.0000 | 1.0000 | 597 | 0 |
0.0001 | 0.9987 | 2110 | 0 |
0.0002 | 0.9971 | 2231 | 0 |
0.0003 | 0.9951 | 2293 | 1 |
0.0004 | 0.9937 | 2338 | 1 |
0.0005 | 0.9922 | 2374 | 1 |
0.0006 | 0.9909 | 2404 | 1 |
0.0007 | 0.9897 | 2430 | 2 |
0.0008 | 0.9881 | 2453 | 2 |
0.0009 | 0.9864 | 2474 | 2 |
0.0010 | 0.9848 | 2491 | 3 |
0.0015 | 0.9768 | 2562 | 4 |
0.0020 | 0.9715 | 2614 | 5 |
0.0025 | 0.9658 | 2657 | 7 |
0.0030 | 0.9580 | 2694 | 8 |
0.0040 | 0.9407 | 2749 | 11 |
0.0050 | 0.9239 | 2789 | 14 |
0.0060 | 0.9138 | 2824 | 17 |
0.0070 | 0.9045 | 2854 | 20 |
0.0080 | 0.8863 | 2881 | 23 |
0.0090 | 0.8743 | 2904 | 26 |
0.0100 | 0.8624 | 2925 | 30 |
0.0150 | 0.7978 | 3007 | 46 |
0.0200 | 0.7270 | 3061 | 63 |
0.0250 | 0.6665 | 3100 | 80 |
0.0300 | 0.6148 | 3131 | 97 |
0.0400 | 0.5193 | 3177 | 133 |
0.0500 | 0.4251 | 3209 | 170 |
0.0750 | 0.2719 | 3260 | 265 |
0.1000 | 0.1661 | 3287 | 366 |
+5 only | |||
0.0000 | 1.0000 | 86 | 0 |
0.0001 | 0.9991 | 201 | 0 |
0.0002 | 0.9985 | 221 | 0 |
0.0003 | 0.9974 | 235 | 0 |
0.0004 | 0.9967 | 245 | 0 |
0.0005 | 0.9961 | 252 | 0 |
0.0006 | 0.9955 | 259 | 0 |
0.0007 | 0.9947 | 265 | 0 |
0.0008 | 0.9931 | 270 | 0 |
0.0009 | 0.9926 | 274 | 0 |
0.0010 | 0.9915 | 278 | 0 |
0.0015 | 0.9873 | 293 | 0 |
0.0020 | 0.9835 | 304 | 1 |
0.0025 | 0.9760 | 312 | 1 |
0.0030 | 0.9715 | 319 | 1 |
0.0040 | 0.9628 | 330 | 1 |
0.0050 | 0.9494 | 337 | 2 |
0.0060 | 0.9367 | 344 | 2 |
0.0070 | 0.9297 | 348 | 3 |
0.0080 | 0.9169 | 354 | 3 |
0.0090 | 0.9108 | 358 | 3 |
0.0100 | 0.8997 | 362 | 4 |
0.0150 | 0.8657 | 378 | 6 |
0.0200 | 0.8223 | 390 | 8 |
0.0250 | 0.7708 | 398 | 11 |
0.0300 | 0.7263 | 405 | 13 |
0.0400 | 0.6701 | 416 | 18 |
0.0500 | 0.5864 | 425 | 23 |
0.0750 | 0.4580 | 439 | 36 |
0.1000 | 0.3255 | 448 | 51 |
peptideprophet | |
---|---|
time | 2017-02-20T14:55:50 |
author | AKeller@ISB |
est_tot_num_correct | 43730.0 |
min_prob | 0.90 |
options | DECOY=DECOY_ MINPROB=0.9 ACCMASS |
type | unlinked |
version | PeptideProphet (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64)) |
inputfile | /home/sean/Documents/proteome/20161205_Sample_8.pep.xml |
database_refresh | |
time | 2017-02-20T14:55:38 |
interact | |
time | 2017-02-20T14:54:56 |
directory | /home/sean/Documents/proteome |
filename | /home/sean/Documents/proteome/interact-20161205_Sample_8.pep.xml |
directory | /home/sean/Documents/proteome |
inputfile | 20161205_Sample_8.pep.xml |
tpp_models | |
time | Mon Feb 20 14:58:21 2017 |