---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.270.0420.4040.10
10.27 < nsp <= 0.860.0370.1650.23
20.86 < nsp <= 1.590.0590.1060.55
31.59 < nsp <= 2.570.0740.0930.80
42.57 < nsp <= 3.860.0860.0701.23
53.86 < nsp <= 5.940.1080.0591.81
65.94 < nsp <= 8.900.1230.0403.05
78.90 < nsp <= 14.780.1450.0304.84
814.78 < nsp <= 26.700.1590.0188.82
926.70 < nsp < inf0.1680.01312.51

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4320.00018110
0.990.7970.00133365
0.980.8570.00235898
0.970.8730.003365710
0.960.8830.003369911
0.950.8910.003373113
0.900.9170.006383922
0.800.9390.010393238
0.700.9630.017403270
0.600.9820.0274114115
0.500.9980.0394178169
0.401.0000.0414188179
0.301.0000.0414188179
0.201.0000.0414188179
0.101.0000.0414188179
0.001.0000.0414188179
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000018110
0.00140.990433355
0.00170.989434176
0.00200.985635237
0.00250.975336279
0.00300.9625369111
0.00400.9360376815
0.00500.9140381819
0.00600.8843385423
0.00700.8570388227
0.00800.8340390432
0.00900.8133392436
0.01000.7916394140
0.01510.7245400961
0.02000.6685405883
0.02510.61714099105
0.03000.57564132128
0.04010.48994184175

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra21651
num_input_3_spectra14011
num_input_4_spectra2693
num_input_5_spectra327
num_predicted_correct_prots4188.2
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_Sample_8A.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_Sample_8A.pep.xml
total_no_spectrum_ids38318.9
program_details
analysisproteinprophet
time2017-02-20T14:54:47
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 14:54:56 2017




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