---
Predicted Sensitivity and Error Rate
Learned NSP distributions

Learned Number of Sibling Peptide Distributions
Neighboring bin smoothing: Y
bin_numbernsp_rangepos_freqneg_freqpos/neg_ratio
00.00 < nsp <= 0.260.0390.4490.09
10.26 < nsp <= 0.830.0350.1800.20
20.83 < nsp <= 1.520.0590.1030.57
31.52 < nsp <= 2.500.0710.0701.01
42.50 < nsp <= 3.780.0880.0591.50
53.78 < nsp <= 5.610.1110.0462.42
65.61 < nsp <= 8.560.1280.0304.25
78.56 < nsp <= 13.930.1420.0226.51
813.93 < nsp <= 24.020.1560.0198.03
924.02 < nsp < inf0.1720.0227.76 (8.03)

Predicted Sensitivity and Error Rate
min_probSensitivityError_Ratenum_correctnum_incorrect
1.000.4460.00018220
0.990.7050.00028820
0.980.8510.00234778
0.970.8690.003355210
0.960.8800.003359811
0.950.8920.004364414
0.900.9120.005372920
0.800.9400.010384240
0.700.9600.017392568
0.600.9780.0263995106
0.500.9910.0364052153
0.401.0000.0454087194
0.301.0000.0454087194
0.201.0000.0454087194
0.101.0000.0454087194
0.001.0000.0454087194
 
Error Table
Error_Ratemin_probnum_correctnum_incorrect
0.00001.000018220
0.00010.989228830
0.00150.988532705
0.00170.987433466
0.00200.984034287
0.00260.975135269
0.00300.9652358411
0.00400.9387366415
0.00500.9096371419
0.00600.8839374823
0.00710.8640377727
0.00810.8406379931
0.00900.8264381935
0.01000.8063383739
0.01500.7223390560
0.02020.6576395481
0.02510.60563990103
0.03000.54344021124
0.04020.46564068170

protein_summary_header
initial_min_peptide_prob0.05
min_peptide_probability0.20
min_peptide_weight0.50
num_input_1_spectra0
num_input_2_spectra20196
num_input_3_spectra14992
num_input_4_spectra3059
num_input_5_spectra312
num_predicted_correct_prots4087.1
reference_databaseCg-Giga_cont_AA.fa
residue_substitution_listI -> L
sample_enzymetrypsin
source_files/home/sean/Documents/proteome/interact-20161205_sample_1.pep.xml
source_files_alt/home/sean/Documents/proteome/interact-20161205_sample_1.pep.xml
total_no_spectrum_ids38203.9
program_details
analysisproteinprophet
time2017-02-20T13:10:43
version Insilicos_LabKey_C++ (TPP v5.0.0 Typhoon, Build 201612091438-exported (Linux-x86_64))
proteinprophet_details
degen_flagY
final_peptide_wt_iters4
fpkm_flagN
groups_flagY
initial_peptide_wt_iters2
nsp_distribution_iters9
nsp_flagY
occam_flagY
tpp_models
timeMon Feb 20 13:10:52 2017




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