PECAN|WARNING| ====== Initiating
PECAN|INFO| # /home/shared/pecan/bin/pecan -b /home/srlab/Documents/DNR_PECAN_Run_1_20170303/Combined-gigas-QC.txt --minCharge 2 --maxCharge 3 --ionTypes y 2017_January_23_envtstress_oyster1.mzML /home/srlab/Documents/DNR_PECAN_Run_1_20170303/Combined-gigas-QC.txt 400.0 405.0 2017_January_23_envtstress_oyster1
PECAN|INFO| # 2017-03-04T08:52:33.413276
PECAN|INFO| # host = roadrunner
PECAN|INFO| # minElutionTime = 12.00
PECAN|INFO| # maxElutionTime = 30.00
PECAN|INFO| # minCharge = 2
PECAN|INFO| # maxCharge = 3
PECAN|INFO| # topX peaks = 1
PECAN|INFO| # decoyTag = decoy
PECAN|INFO| # bgDecoyNumber = 2000
PECAN|INFO| # isoWindowWidth = 5.00
PECAN|INFO| # idotpThreshold = 0.00
PECAN|INFO| # ms1Tolerance = 10 ppm
PECAN|INFO| # ms2Tolerance = 10 ppm
PECAN|INFO| # overlapPercentage = 0
PECAN|INFO| # alpha = 1.80
PECAN|INFO| # beta = 0.40
PECAN|INFO| # fixedMod = C=C[+57.021464]
PECAN|INFO| # logFile = 2017_January_23_envtstress_oyster1.402.5.log
PECAN|INFO| # mzBoundaries = [58.0, 870.0]
PECAN|INFO| # ionTypes = ('y',)
PECAN|INFO| # backgroundProteome = /home/srlab/Documents/DNR_PECAN_Run_1_20170303/Combined-gigas-QC.txt
PECAN|INFO| # SCIEX mzML? False
PECAN|WARNING| ====== Checking ms2
PECAN.Chromatogram|INFO| Scanned 0 MS2 scans with precursor m/z 400.0 - 405.0
PECAN.Chromatogram|INFO| Cycle time for the first 100 cycles: 0.000000 seconds
PECAN.Chromatogram|INFO| 0 MS2 scans! Quit now