zr2096_3_s1_R2_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 6387 lines in total Total number of methylation call strings processed: 6387 Final Cytosine Methylation Report ================================= Total number of C's analysed: 111400 Total methylated C's in CpG context: 12185 Total methylated C's in CHG context: 810 Total methylated C's in CHH context: 2682 Total C to T conversions in CpG context: 3947 Total C to T conversions in CHG context: 24833 Total C to T conversions in CHH context: 66943 C methylated in CpG context: 75.5% C methylated in CHG context: 3.2% C methylated in CHH context: 3.9%