zr2096_5_s1_R2_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 6202 lines in total Total number of methylation call strings processed: 6202 Final Cytosine Methylation Report ================================= Total number of C's analysed: 103940 Total methylated C's in CpG context: 8868 Total methylated C's in CHG context: 757 Total methylated C's in CHH context: 2856 Total C to T conversions in CpG context: 4481 Total C to T conversions in CHG context: 22166 Total C to T conversions in CHH context: 64812 C methylated in CpG context: 66.4% C methylated in CHG context: 3.3% C methylated in CHH context: 4.2%