zr2096_7_s1_R1_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 6352 lines in total Total number of methylation call strings processed: 6352 Final Cytosine Methylation Report ================================= Total number of C's analysed: 107029 Total methylated C's in CpG context: 9550 Total methylated C's in CHG context: 804 Total methylated C's in CHH context: 2977 Total C to T conversions in CpG context: 4133 Total C to T conversions in CHG context: 23247 Total C to T conversions in CHH context: 66318 C methylated in CpG context: 69.8% C methylated in CHG context: 3.3% C methylated in CHH context: 4.3%