zr2096_7_s1_R2_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 6387 lines in total Total number of methylation call strings processed: 6387 Final Cytosine Methylation Report ================================= Total number of C's analysed: 106977 Total methylated C's in CpG context: 9312 Total methylated C's in CHG context: 821 Total methylated C's in CHH context: 2823 Total C to T conversions in CpG context: 4043 Total C to T conversions in CHG context: 22916 Total C to T conversions in CHH context: 67062 C methylated in CpG context: 69.7% C methylated in CHG context: 3.5% C methylated in CHH context: 4.0%