zr2096_8_s1_R1_bismark_bt2.bam Parameters used to extract methylation information: Bismark Extractor Version: v0.19.0 Bismark result file: single-end (SAM format) Output specified: strand-specific (default) Processed 5715 lines in total Total number of methylation call strings processed: 5715 Final Cytosine Methylation Report ================================= Total number of C's analysed: 94042 Total methylated C's in CpG context: 7628 Total methylated C's in CHG context: 699 Total methylated C's in CHH context: 2957 Total C to T conversions in CpG context: 4076 Total C to T conversions in CHG context: 20470 Total C to T conversions in CHH context: 58212 C methylated in CpG context: 65.2% C methylated in CHG context: 3.3% C methylated in CHH context: 4.8%