Basic Statistics
Measure | Value |
---|---|
Filename | NR006_S3_L001_R1_001_val_1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3414678 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-151 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC | 60579 | 1.7740765015032165 | TruSeq Adapter, Index 6 (100% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCGCGTATGC | 28095 | 0.8227715761193296 | TruSeq Adapter, Index 6 (98% over 50bp) |
CGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCCGT | 6490 | 0.19006184477716492 | TruSeq Adapter, Index 6 (100% over 50bp) |