Basic Statistics
Measure | Value |
---|---|
Filename | NR006_S3_L002_R1_001_val_1.fq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3031025 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-151 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC | 97289 | 3.209772271756254 | TruSeq Adapter, Index 6 (100% over 50bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCGCGTATGC | 36290 | 1.1972847469090488 | TruSeq Adapter, Index 6 (98% over 50bp) |
CGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCCGT | 10015 | 0.33041627832168985 | TruSeq Adapter, Index 6 (100% over 50bp) |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4923 | 0.1624203033627238 | No Hit |
CGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCGCGTATGCCGT | 4047 | 0.13351918905320806 | TruSeq Adapter, Index 6 (98% over 50bp) |