FastQCFastQC Report
Mon 29 Jan 2018
NR006_S3_L002_R2_001_val_2.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameNR006_S3_L002_R2_001_val_2.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3031025
Sequences flagged as poor quality0
Sequence length20-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG389121.2837901369998599No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT53360.17604605702691334No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)