FastQCFastQC Report
Tue 27 Mar 2018
160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences42108576
Sequences flagged as poor quality0
Sequence length49
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGAAG54750.024.07214530
TCACGCG61350.021.97310427
CACGCGA62950.021.48292428
ACGCGAA69000.019.53695729
CGGAAGA70050.019.3668821
GTCACGC72900.018.66872626
GCGAAGT73100.018.08823431
CGTATGC75250.017.8285743
GCACACG78500.017.336948
GAACTCC80250.016.90529418
GAAGAGC85700.015.8803973
AGTCACG89500.015.30223425
AATCTCG85150.015.12448638
TCGTATG96000.014.46770942
CTCGTAT95100.014.33333341
CGAAGTA94250.014.25729532
TCTCGTA91450.014.08255940
CACGTCT99900.013.62312211
CGTCTGA101700.013.614552513
ACGTCTG102000.013.59558712
Produced by FastQC (version 0.11.5)