# ContigOrdering file. This file represents a ContigOrdering object, which describes an ordering of contigs within a Proximo cluster. # See ContigOrdering.h for more documentation. # # Important numbers: # N_contigs 117 (Number of contigs in the input cluster) # N_contigs_used 117 (Number of contigs ordered by this ordering) # has_Q_scores 1 (Boolean: has orientation quality scores?) # has_gaps 0 (Boolean: have gap sizes between contigs been estimated?) # # Columns: #contig_ID(local) contig_name contig_rc orientation_Q_score gap_size_after_contig 39 1216 1 322.244 . 79 512484 1 462.907 . 52 1475 1 522.177 . 54 1493 1 1198.47 . 46 1332 0 62.2344 . 56 1634 0 90.2441 . 26 951 0 293.575 . 15 659 0 467.509 . 111 520010 1 592.105 . 98 517522 0 279.337 . 27 980 1 66.3241 . 110 519771 1 9.09903 . 10 508 1 202.022 . 61 491496 0 88.4467 . 64 500030 1 12.983 . 3 419 1 40861.4 . 6 452 1 27114 . 16 663 1 2178.68 . 29 995 0 1876.13 . 87 514703 1 66.084 . 30 1008 1 401.683 . 42 1270 1 986.344 . 113 520466 0 2232.21 . 96 516372 1 2410.22 . 66 505111 0 72.3861 . 78 512458 0 56.0622 . 2 411 1 209.101 . 65 504371 1 47.9972 . 49 1350 1 442.868 . 18 727 0 122.097 . 60 1765 1 216.476 . 4 430 1 410.487 . 33 1061 0 231.933 . 81 513179 0 4.80305 . 44 1289 0 562.258 . 25 902 1 115.848 . 94 516038 1 17.3188 . 68 508850 1 34.9894 . 67 506485 1 118.449 . 40 1256 0 1294.15 . 83 513644 1 151.316 . 77 512351 0 57.728 . 89 514821 0 71.7763 . 14 652 0 2020.01 . 59 1735 0 1671.13 . 63 498374 1 34.6312 . 43 1277 1 847.494 . 20 785 0 8.85103 . 107 519364 0 10.685 . 100 517971 1 60.7667 . 5 442 0 132.013 . 109 519737 1 2079.68 . 108 519670 0 2258.51 . 0 362 0 1734.61 . 71 509426 0 101.276 . 112 520044 0 150.3 . 51 1472 1 19.5007 . 11 594 1 922.259 . 55 1618 0 214.592 . 37 1112 1 80.3501 . 48 1343 0 82.7458 . 88 514721 0 25.2724 . 70 509189 1 152.838 . 58 1695 0 108.864 . 74 511276 0 69.9306 . 22 854 0 781.164 . 92 515881 0 97.4521 . 17 691 0 541.537 . 93 516003 0 392.253 . 45 1291 1 83.9162 . 1 363 0 587.018 . 82 513251 1 72.1167 . 84 514181 1 259.985 . 86 514631 0 344.88 . 76 512080 0 178.069 . 69 509143 0 77.3407 . 62 496370 1 157.94 . 115 521019 0 521.206 . 53 1488 1 1133.89 . 114 520540 0 369.581 . 95 516048 1 287.647 . 32 1046 0 470.27 . 38 1114 1 445.312 . 13 640 0 697.298 . 28 982 1 341.346 . 35 1079 0 73.1498 . 99 517588 0 201.201 . 9 487 1 258.429 . 41 1259 1 73.476 . 102 518267 0 2162.73 . 101 518245 1 1981.8 . 105 518893 0 2701.25 . 106 518962 1 2292.63 . 116 521090 0 0 . 90 514930 1 54.3696 . 57 1679 0 462.004 . 12 613 0 249.368 . 21 825 0 1743.62 . 31 1032 1 505.854 . 47 1342 1 180.626 . 80 513121 0 103.006 . 97 516818 0 301.638 . 50 1419 0 192.752 . 72 509443 1 3.72175 . 36 1104 0 298.966 . 23 861 1 64.103 . 19 747 0 49.5216 . 91 515249 0 26.6319 . 34 1066 1 335.452 . 24 869 0 78.1299 . 8 477 1 394.586 . 7 463 0 204.431 . 73 509493 0 145.495 . 85 514492 1 81.1575 . 75 511943 0 20.1377 . 103 518522 0 1898.36 . 104 518673 1 1710.68 .