# ContigOrdering file. This file represents a ContigOrdering object, which describes an ordering of contigs within a Proximo cluster. # See ContigOrdering.h for more documentation. # # Important numbers: # N_contigs 115 (Number of contigs in the input cluster) # N_contigs_used 115 (Number of contigs ordered by this ordering) # has_Q_scores 1 (Boolean: has orientation quality scores?) # has_gaps 0 (Boolean: have gap sizes between contigs been estimated?) # # Columns: #contig_ID(local) contig_name contig_rc orientation_Q_score gap_size_after_contig 95 517009 1 154.121 . 101 518435 0 1725.93 . 90 516371 0 131.694 . 76 514255 1 372.551 . 66 512114 1 273.54 . 49 505804 1 113.516 . 7 516 0 317.102 . 59 510031 0 197.964 . 50 506425 1 29.5324 . 73 513782 0 54.6933 . 92 516702 0 5.09517 . 33 1337 0 4.07726 . 34 1369 0 1669.84 . 104 519657 1 4395.87 . 105 519686 0 5324.01 . 36 1479 0 3364.44 . 9 611 0 2548.71 . 96 517533 1 169.393 . 3 406 0 1301.48 . 23 1119 1 103.109 . 29 1183 0 3343.67 . 18 836 1 278.295 . 26 1152 1 893.315 . 10 627 1 404.158 . 102 518778 1 1.64114 . 8 590 0 794.955 . 57 509442 1 493.084 . 24 1128 0 464.65 . 52 507410 0 116.928 . 48 505168 0 129.277 . 41 486440 0 120.415 . 44 500180 1 93.6244 . 20 1007 1 7.93764 . 17 819 1 656.727 . 27 1160 1 2413.73 . 12 721 0 3620.71 . 35 1407 1 59.2234 . 5 489 0 70.1891 . 1 359 0 5128.71 . 2 364 1 2584.13 . 69 512911 0 30.6108 . 37 1537 0 9.51859 . 100 518171 1 1356.18 . 70 513021 1 886.432 . 72 513576 0 580.384 . 13 748 1 316.806 . 31 1242 1 145.821 . 65 512066 1 56.6505 . 25 1146 1 631.747 . 64 511942 1 13.3226 . 109 521095 0 2737.21 . 108 520748 0 2724.03 . 61 510238 1 36.4274 . 43 492119 1 28.8832 . 85 515662 0 101.915 . 30 1224 0 74.7252 . 79 514819 1 360.335 . 60 510056 1 29.7298 . 98 518009 0 426.143 . 97 517915 0 306.408 . 42 486725 0 38.6804 . 58 509857 0 170.214 . 53 507803 1 198.808 . 47 505119 0 15.2266 . 71 513359 0 144.671 . 56 509187 1 59.7018 . 39 1691 0 17.2484 . 82 515318 1 596.171 . 68 512878 0 91.1526 . 83 515598 0 98.5363 . 94 516999 1 404.144 . 63 511604 0 21.3805 . 19 862 0 1281.46 . 22 1035 1 977.185 . 67 512216 1 56.2055 . 99 518014 1 259.363 . 77 514681 1 138.25 . 40 1776 1 435.894 . 74 513976 1 317.354 . 87 516034 1 263.53 . 51 507407 1 9.20321 . 89 516124 1 303.583 . 111 521651 0 90.3524 . 11 653 0 305.32 . 81 515309 0 326.359 . 86 515856 1 503.323 . 88 516078 0 498.345 . 62 510274 0 238.324 . 84 515599 0 353.92 . 78 514778 1 188.521 . 106 519709 1 63.9467 . 103 518833 1 246.169 . 15 772 1 125.379 . 54 508371 1 112.361 . 4 436 0 1320.12 . 114 7207663 1 283.909 . 113 7207662 1 255.321 . 6 514 0 82.9261 . 21 1018 1 644.712 . 32 1265 1 1634.15 . 28 1175 1 17.7759 . 107 519950 1 168.28 . 45 502278 1 405.57 . 112 521984 0 78.012 . 75 514182 1 50.1858 . 110 521340 1 545.64 . 80 515250 1 1235.23 . 93 516738 1 64.6943 . 14 763 0 187.264 . 0 335 1 633.006 . 38 1640 0 86.9053 . 16 788 1 80.4214 . 91 516538 0 402.013 . 55 509185 0 54.3209 . 46 503466 0 0 .