# ContigOrdering file. This file represents a ContigOrdering object, which describes an ordering of contigs within a Proximo cluster. # See ContigOrdering.h for more documentation. # # Important numbers: # N_contigs 103 (Number of contigs in the input cluster) # N_contigs_used 103 (Number of contigs ordered by this ordering) # has_Q_scores 1 (Boolean: has orientation quality scores?) # has_gaps 0 (Boolean: have gap sizes between contigs been estimated?) # # Columns: #contig_ID(local) contig_name contig_rc orientation_Q_score gap_size_after_contig 87 518593 1 2249.48 . 85 518402 0 2242.48 . 69 511791 1 76.052 . 64 510399 0 51.6592 . 10 522 0 574.79 . 11 620 0 1022.44 . 39 1215 0 227.601 . 75 513396 1 236.954 . 50 1480 1 811.99 . 80 516049 0 101.356 . 79 515183 0 116.138 . 95 519734 1 8088.85 . 94 519667 0 6467.53 . 51 1487 1 455.88 . 44 1303 1 695.351 . 88 518745 0 51.5574 . 92 519596 0 3374.85 . 93 519638 1 3561.56 . 86 518514 1 2117.54 . 89 518865 0 1590.23 . 91 519571 1 3.35011 . 8 484 1 105.865 . 6 476 0 1133.52 . 46 1411 0 89.7214 . 70 511929 0 79.9569 . 66 511463 1 93.4408 . 9 520 1 229.139 . 7 483 0 726.725 . 33 1144 1 404.378 . 81 516729 1 66.4091 . 41 1280 1 659.139 . 63 510248 1 1.74403 . 20 831 0 0.88617 . 48 1415 0 71.1753 . 84 518306 0 70.052 . 26 985 0 1555.81 . 55 1704 1 300.838 . 29 1075 1 225.609 . 77 515130 0 458.845 . 76 514318 1 468.427 . 71 512058 0 526.467 . 34 1149 1 199.056 . 65 511332 1 309.028 . 53 1660 0 222.396 . 99 521599 1 156.462 . 2 431 1 866.928 . 5 456 1 606.307 . 1 421 0 846.959 . 16 745 1 1345.53 . 72 512287 0 76.1732 . 0 412 0 1703.76 . 38 1200 0 14.2776 . 57 504038 1 4.74285 . 4 449 1 1918.19 . 27 1034 1 890.391 . 22 867 0 280.493 . 67 511509 0 121.667 . 73 512914 1 154.613 . 101 6252962 1 13.0566 . 102 6252963 0 11.478 . 100 6245277 1 67.983 . 23 897 1 108.003 . 97 520232 0 691.199 . 96 520229 1 460.18 . 37 1193 1 137.37 . 54 1693 1 448.556 . 49 1432 0 325.975 . 18 757 1 29.5669 . 3 434 1 1111.88 . 25 962 1 428.937 . 40 1253 1 1058.52 . 47 1413 1 884.36 . 24 939 1 769.829 . 43 1298 1 1905.26 . 90 519378 0 139.479 . 30 1108 0 441.056 . 78 515131 1 1507.09 . 82 517170 0 1272.74 . 45 1393 0 1394.9 . 42 1287 1 163.525 . 13 714 0 193.3 . 60 509460 0 126.63 . 68 511599 0 16.9619 . 31 1115 1 242.401 . 52 1496 0 460.999 . 19 787 0 424.473 . 12 687 1 386.746 . 56 1711 1 417.618 . 15 744 1 316.691 . 14 718 1 33.505 . 61 510028 0 15.1943 . 17 753 1 1250.78 . 28 1069 1 1738.92 . 36 1189 0 545.846 . 35 1184 0 203.341 . 98 520852 0 183.996 . 74 513372 1 174.531 . 58 507001 1 37.1988 . 21 837 0 292.435 . 83 518177 1 63.5041 . 62 510045 1 31.5337 . 32 1129 1 582.888 . 59 507977 1 0.00703779 .