Bowtie seems to be working fine (tested command '/home/shared/bowtie2-2.3.4.1-linux-x86_64/bowtie2 --version' [2.3.4]) Output format is BAM (default) Alignments will be written out in BAM format. Samtools found here: '/home/shared/bin/samtools' Reference genome folder provided is /home/sam/data/oly_methylseq/oly_genome/ (absolute path is '/home/sam/data/oly_methylseq/oly_genome/)' Processing sequences up to read no. 1000000 from the input file Attention: using more than 4 cores per alignment thread has been reported to have diminishing returns. If possible try to limit -p to a value of 4 Input files to be analysed (in current folder '/home/sam/analyses/20180507_oly_methylseq_bismark'): /home/sam/analyses/20180503_oly_methylseq_trimgalore/1_ATCACG_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/2_CGATGT_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/3_TTAGGC_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/4_TGACCA_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/5_ACAGTG_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/6_GCCAAT_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/7_CAGATC_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/8_ACTTGA_L001_R1_001_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_10_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_11_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_12_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_13_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_14_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_15_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_16_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_17_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_18_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_1_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_2_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_3_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_4_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_5_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_6_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_7_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_8_s456_trimmed.fq.gz /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_9_s456_trimmed.fq.gz Library was specified to be not strand-specific (non-directional), therefore alignments to all four possible bisulfite strands (OT, CTOT, OB and CTOB) will be reported Setting parallelization to single-threaded (default) Current working directory is: /home/sam/analyses/20180507_oly_methylseq_bismark Now reading in and storing sequence information of the genome specified in: /home/sam/data/oly_methylseq/oly_genome/ Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/1_ATCACG_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 1_ATCACG_L001_R1_001_trimmed.fq.gz to 1_ATCACG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 1_ATCACG_L001_R1_001_trimmed.fq.gz to 1_ATCACG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 1_ATCACG_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 1_ATCACG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 1_ATCACG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 1_ATCACG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1346:2178_1:N:0:ATCACG 0 Contig73175_CT_converted 4546 1 31M * 0 0 GATGTTGATTGAATGTGGTTTTGTGGTTGTG HDHIIIJIJJJGEHDFJIGEHGEGGIFHIBG AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for CTreadGAgenome (reading in sequences from 1_ATCACG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1346:2178_1:N:0:ATCACG 16 Contig81388_GA_converted 2016 1 31M * 0 0 CACAACCACAAAACCACATTCAATCAACATC GBIHFIGGEGHEGIJFDHEGJJJIJIIIHDH AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadCTgenome (reading in sequences from 1_ATCACG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1346:2178_1:N:0:ATCACG 4 * 0 0 * * 0 0 AATATTAATTAAATATAATTTTATAATTATA HDHIIIJIJJJGEHDFJIGEHGEGGIFHIBG YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 1_ATCACG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1346:2178_1:N:0:ATCACG 4 * 0 0 * * 0 0 AATATTAATTAAATATAATTTTATAATTATA HDHIIIJIJJJGEHDFJIGEHGEGGIFHIBG YT:Z:UU >>> Writing bisulfite mapping results to 1_ATCACG_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/1_ATCACG_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16842:3702_1:N:0:ATCACG Contig238624 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9464:5753_1:N:0:ATCACG Contig521501 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2360:7327_1:N:0:ATCACG Contig559109 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9385:12762_1:N:0:ATCACG Contig427971 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2900:13143_1:N:0:ATCACG Contig36335 7478 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17640:16956_1:N:0:ATCACG Contig156638 13242 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4207:18353_1:N:0:ATCACG Contig29443 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6866:19581_1:N:0:ATCACG Contig256351 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17651:20343_1:N:0:ATCACG Contig1548 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18624:20317_1:N:0:ATCACG Contig641140 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9561:24472_1:N:0:ATCACG Contig152604 1014 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9248:25311_1:N:0:ATCACG Contig22197 6040 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1942:26850_1:N:0:ATCACG Contig515508 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7080:27936_1:N:0:ATCACG Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12831:28678_1:N:0:ATCACG Contig16971 7947 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19112:30628_1:N:0:ATCACG Contig215022 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4113:30790_1:N:0:ATCACG Contig184770 462 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19140:31855_1:N:0:ATCACG Contig38329 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3662:33398_1:N:0:ATCACG Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1487:34989_1:N:0:ATCACG Contig308188 142 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20861:36365_1:N:0:ATCACG Contig118590 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4610:36503_1:N:0:ATCACG Contig207148 777 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11094:37612_1:N:0:ATCACG Contig23729 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13209:41472_1:N:0:ATCACG Contig366066 184 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17046:41773_1:N:0:ATCACG Contig402473 209 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2963:44425_1:N:0:ATCACG Contig48256 1599 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16825:46257_1:N:0:ATCACG Contig7921 5269 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2733:47109_1:N:0:ATCACG Contig11480 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10249:48503_1:N:0:ATCACG Contig170353 811 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16419:49761_1:N:0:ATCACG Contig579553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8209:51893_1:N:0:ATCACG Contig304780 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15180:52640_1:N:0:ATCACG Contig111391 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3619:52755_1:N:0:ATCACG Contig459870 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1755:58273_1:N:0:ATCACG Contig512407 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20874:61661_1:N:0:ATCACG Contig270296 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12721:63483_1:N:0:ATCACG Contig448469 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17895:70430_1:N:0:ATCACG Contig241902 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7745:74455_1:N:0:ATCACG Contig56191 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11301:75971_1:N:0:ATCACG Contig484009 293 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9994:79415_1:N:0:ATCACG Contig253321 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15009:79334_1:N:0:ATCACG Contig289669 367 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2108:83170_1:N:0:ATCACG Contig568002 128 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7171:83222_1:N:0:ATCACG Contig488045 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19874:83086_1:N:0:ATCACG Contig299081 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14736:83468_1:N:0:ATCACG Contig48729 5936 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6157:84669_1:N:0:ATCACG Contig54452 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13324:85541_1:N:0:ATCACG Contig150027 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16080:86264_1:N:0:ATCACG Contig34492 3656 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12271:90000_1:N:0:ATCACG Contig204282 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9770:90429_1:N:0:ATCACG Contig171707 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14704:90778_1:N:0:ATCACG Contig43363 37542 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21258:95194_1:N:0:ATCACG Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12882:95301_1:N:0:ATCACG Contig189202 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4170:95568_1:N:0:ATCACG Contig319782 170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16747:96932_1:N:0:ATCACG Contig137089 1038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12021:97063_1:N:0:ATCACG Contig343408 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5109:97686_1:N:0:ATCACG Contig196982 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3936:98076_1:N:0:ATCACG Contig184682 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5184:4788_1:N:0:ATCACG Contig147292 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7253:6314_1:N:0:ATCACG Contig645560 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3324:8059_1:N:0:ATCACG Contig34599 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8015:8600_1:N:0:ATCACG Contig274803 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19644:8942_1:N:0:ATCACG Contig27610 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13865:10635_1:N:0:ATCACG Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19024:13393_1:N:0:ATCACG Contig631463 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5733:13654_1:N:0:ATCACG Contig266883 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13103:14600_1:N:0:ATCACG Contig220404 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18372:14738_1:N:0:ATCACG Contig632545 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12933:16626_1:N:0:ATCACG Contig377908 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7477:16774_1:N:0:ATCACG Contig606524 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14354:20310_1:N:0:ATCACG Contig87209 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15414:22853_1:N:0:ATCACG Contig117276 7099 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16426:22793_1:N:0:ATCACG Contig37751 947 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14218:24684_1:N:0:ATCACG Contig14410 174 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14073:27839_1:N:0:ATCACG Contig591427 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7007:28616_1:N:0:ATCACG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10336:30255_1:N:0:ATCACG Contig9424 2289 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2478:33423_1:N:0:ATCACG Contig496014 282 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1454:35218_1:N:0:ATCACG Contig561557 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11934:35301_1:N:0:ATCACG Contig324978 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11925:35337_1:N:0:ATCACG Contig324978 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13539:36700_1:N:0:ATCACG Contig371823 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14979:40387_1:N:0:ATCACG Contig236944 131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15473:40520_1:N:0:ATCACG Contig302826 270 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14943:41262_1:N:0:ATCACG Contig530019 131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20634:42351_1:N:0:ATCACG Contig694583 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20682:43619_1:N:0:ATCACG Contig60925 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6670:43900_1:N:0:ATCACG Contig154133 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10913:45740_1:N:0:ATCACG Contig362232 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8570:46374_1:N:0:ATCACG Contig349501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3001:47290_1:N:0:ATCACG Contig204850 1222 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18548:47545_1:N:0:ATCACG Contig186372 6130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5077:47755_1:N:0:ATCACG Contig342617 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17530:47766_1:N:0:ATCACG Contig212312 982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13158:48231_1:N:0:ATCACG Contig401060 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20787:51152_1:N:0:ATCACG Contig318852 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3558:52963_1:N:0:ATCACG Contig584498 122 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11648:54029_1:N:0:ATCACG Contig51130 26565 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11812:56185_1:N:0:ATCACG Contig206888 690 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8919:59476_1:N:0:ATCACG Contig166447 712 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16413:61717_1:N:0:ATCACG Contig19712 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8684:62358_1:N:0:ATCACG Contig124506 1057 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17998:63358_1:N:0:ATCACG Contig140382 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3367:66598_1:N:0:ATCACG Contig313433 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12136:66656_1:N:0:ATCACG Contig4150 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20461:71135_1:N:0:ATCACG Contig629431 217 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16463:73872_1:N:0:ATCACG Contig455509 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1740:74048_1:N:0:ATCACG Contig414811 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4448:77910_1:N:0:ATCACG Contig46359 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7662:79532_1:N:0:ATCACG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9085:81203_1:N:0:ATCACG Contig430926 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3588:81329_1:N:0:ATCACG Contig352277 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12577:81369_1:N:0:ATCACG Contig108449 1170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18203:82881_1:N:0:ATCACG Contig266499 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1757:84005_1:N:0:ATCACG Contig391491 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9354:84729_1:N:0:ATCACG Contig10434 2274 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3019:85561_1:N:0:ATCACG Contig475499 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12615:88285_1:N:0:ATCACG Contig31612 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5249:89863_1:N:0:ATCACG Contig612958 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7981:90226_1:N:0:ATCACG Contig212960 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16690:90922_1:N:0:ATCACG Contig606367 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3071:91045_1:N:0:ATCACG Contig397146 363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8975:91348_1:N:0:ATCACG Contig435713 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3522:92392_1:N:0:ATCACG Contig211035 785 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9735:99050_1:N:0:ATCACG Contig431712 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15104:2717_1:N:0:ATCACG Contig359995 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13712:5340_1:N:0:ATCACG Contig302095 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15216:5796_1:N:0:ATCACG Contig50959 2337 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4232:6654_1:N:0:ATCACG Contig4083 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7662:6743_1:N:0:ATCACG Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7767:10003_1:N:0:ATCACG Contig393847 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2832:10877_1:N:0:ATCACG Contig556038 407 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12482:11279_1:N:0:ATCACG Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1118:11802_1:N:0:ATCACG Contig24199 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15866:13384_1:N:0:ATCACG Contig53023 9203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9610:15758_1:N:0:ATCACG Contig598552 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1170:17818_1:N:0:ATCACG Contig71189 25017 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5251:18536_1:N:0:ATCACG Contig232335 215 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8611:19930_1:N:0:ATCACG Contig687501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8636:19968_1:N:0:ATCACG Contig687501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12660:21206_1:N:0:ATCACG Contig81801 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1515:21610_1:N:0:ATCACG Contig631884 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2517:24862_1:N:0:ATCACG Contig150027 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14480:29660_1:N:0:ATCACG Contig619682 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14215:34396_1:N:0:ATCACG Contig352543 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13875:35450_1:N:0:ATCACG Contig338556 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11195:37434_1:N:0:ATCACG Contig222310 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18667:37734_1:N:0:ATCACG Contig241992 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19885:39193_1:N:0:ATCACG Contig454885 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6950:41342_1:N:0:ATCACG Contig675749 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6838:42729_1:N:0:ATCACG Contig138211 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19023:43920_1:N:0:ATCACG Contig667415 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4512:44924_1:N:0:ATCACG Contig565889 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9946:45837_1:N:0:ATCACG Contig25160 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9202:46313_1:N:0:ATCACG Contig587578 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15525:46399_1:N:0:ATCACG Contig20927 31992 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19386:47644_1:N:0:ATCACG Contig155508 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15623:48232_1:N:0:ATCACG Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11872:53369_1:N:0:ATCACG Contig90430 2981 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6703:55655_1:N:0:ATCACG Contig160526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20442:56270_1:N:0:ATCACG Contig203034 484 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20819:62126_1:N:0:ATCACG Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3562:64385_1:N:0:ATCACG Contig192275 1703 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1291:64972_1:N:0:ATCACG Contig9576 783 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19793:65262_1:N:0:ATCACG Contig696944 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7330:65974_1:N:0:ATCACG Contig54452 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3862:66205_1:N:0:ATCACG Contig160770 2243 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10965:67155_1:N:0:ATCACG Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7769:70057_1:N:0:ATCACG Contig365760 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11435:71691_1:N:0:ATCACG Contig55975 12926 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19800:72018_1:N:0:ATCACG Contig402793 150 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17865:74003_1:N:0:ATCACG Contig352517 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1217:76036_1:N:0:ATCACG Contig267665 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11314:76752_1:N:0:ATCACG Contig667258 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10950:77064_1:N:0:ATCACG Contig363540 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4652:79596_1:N:0:ATCACG Contig44367 662 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20611:80600_1:N:0:ATCACG Contig68472 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9232:81917_1:N:0:ATCACG Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14200:86057_1:N:0:ATCACG Contig690156 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5943:89114_1:N:0:ATCACG Contig113399 883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11839:92202_1:N:0:ATCACG Contig115342 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10000:93395_1:N:0:ATCACG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13425:94817_1:N:0:ATCACG Contig584153 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18062:94777_1:N:0:ATCACG Contig492255 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18447:98105_1:N:0:ATCACG Contig338315 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8797:99310_1:N:0:ATCACG Contig486028 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6949:101022_1:N:0:ATCACG Contig435135 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20346:2288_1:N:0:ATCACG Contig135488 2214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19546:2668_1:N:0:ATCACG Contig595789 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8247:4873_1:N:0:ATCACG Contig56716 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10028:7922_1:N:0:ATCACG Contig264341 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13640:10450_1:N:0:ATCACG Contig223842 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20901:11435_1:N:0:ATCACG Contig360647 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13917:13890_1:N:0:ATCACG Contig547110 313 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20497:14503_1:N:0:ATCACG Contig342167 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3099:15088_1:N:0:ATCACG Contig652810 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5090:17012_1:N:0:ATCACG Contig31460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4681:21420_1:N:0:ATCACG Contig306327 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10614:21669_1:N:0:ATCACG Contig118205 1583 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14232:25996_1:N:0:ATCACG Contig548856 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12519:26081_1:N:0:ATCACG Contig7920 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13947:33795_1:N:0:ATCACG Contig279673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7762:34679_1:N:0:ATCACG Contig87338 6048 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12798:34789_1:N:0:ATCACG Contig202325 716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4433:43575_1:N:0:ATCACG Contig384774 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14071:44217_1:N:0:ATCACG Contig63111 2845 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8908:44456_1:N:0:ATCACG Contig130907 824 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5973:44688_1:N:0:ATCACG Contig503511 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5403:46087_1:N:0:ATCACG Contig29385 31100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4072:46488_1:N:0:ATCACG Contig219343 4057 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6388:49385_1:N:0:ATCACG Contig74243 6005 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8149:50650_1:N:0:ATCACG Contig104895 10861 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18467:51141_1:N:0:ATCACG Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15731:51544_1:N:0:ATCACG Contig455098 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12300:52643_1:N:0:ATCACG Contig197153 628 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19299:52687_1:N:0:ATCACG Contig546408 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12972:55176_1:N:0:ATCACG Contig606186 232 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10154:55713_1:N:0:ATCACG Contig169721 708 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18309:56661_1:N:0:ATCACG Contig78456 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6546:56890_1:N:0:ATCACG Contig478818 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13663:58063_1:N:0:ATCACG Contig203024 1962 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13815:58350_1:N:0:ATCACG Contig13167 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14522:59538_1:N:0:ATCACG Contig110796 2074 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14922:61033_1:N:0:ATCACG Contig376959 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11829:62336_1:N:0:ATCACG Contig679309 286 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1518:63275_1:N:0:ATCACG Contig61432 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6229:63492_1:N:0:ATCACG Contig398227 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3881:65259_1:N:0:ATCACG Contig105312 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4566:66395_1:N:0:ATCACG Contig146131 1132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18109:67783_1:N:0:ATCACG Contig484839 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9409:72973_1:N:0:ATCACG Contig646142 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18246:75443_1:N:0:ATCACG Contig248441 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18700:77275_1:N:0:ATCACG Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2052:80193_1:N:0:ATCACG Contig212553 495 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7800:81896_1:N:0:ATCACG Contig24029 6626 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8875:82667_1:N:0:ATCACG Contig263177 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19277:82944_1:N:0:ATCACG Contig72124 9363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3299:84038_1:N:0:ATCACG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11457:84497_1:N:0:ATCACG Contig518805 319 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13895:84327_1:N:0:ATCACG Contig258763 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11199:84609_1:N:0:ATCACG Contig633885 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13782:85358_1:N:0:ATCACG Contig411197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20585:85808_1:N:0:ATCACG Contig406233 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16232:86850_1:N:0:ATCACG Contig543958 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13458:88967_1:N:0:ATCACG Contig671806 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10044:89433_1:N:0:ATCACG Contig315549 115 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4997:98796_1:N:0:ATCACG Contig212073 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16360:99617_1:N:0:ATCACG Contig306375 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14416:2714_1:N:0:ATCACG Contig165074 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11196:2968_1:N:0:ATCACG Contig153389 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19710:5182_1:N:0:ATCACG Contig551111 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18458:7392_1:N:0:ATCACG Contig625211 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7197:11888_1:N:0:ATCACG Contig385826 132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7421:11859_1:N:0:ATCACG Contig147850 1368 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4345:15735_1:N:0:ATCACG Contig292420 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11529:20123_1:N:0:ATCACG Contig398248 143 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6584:20889_1:N:0:ATCACG Contig501892 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12928:21745_1:N:0:ATCACG Contig444393 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5251:22628_1:N:0:ATCACG Contig343139 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14463:24249_1:N:0:ATCACG Contig458377 135 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13863:24865_1:N:0:ATCACG Contig266475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5862:25751_1:N:0:ATCACG Contig641200 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3543:27276_1:N:0:ATCACG Contig664971 217 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3398:27783_1:N:0:ATCACG Contig533827 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6406:31432_1:N:0:ATCACG Contig91312 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13631:31684_1:N:0:ATCACG Contig22185 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21153:32240_1:N:0:ATCACG Contig152902 410 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17952:32735_1:N:0:ATCACG Contig681504 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1327:32968_1:N:0:ATCACG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10341:32988_1:N:0:ATCACG Contig498424 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4380:34794_1:N:0:ATCACG Contig348151 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6028:36239_1:N:0:ATCACG Contig281988 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12986:39625_1:N:0:ATCACG Contig159379 8237 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4623:40055_1:N:0:ATCACG Contig497555 157 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20812:40855_1:N:0:ATCACG Contig434624 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11250:41233_1:N:0:ATCACG Contig34870 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2676:47702_1:N:0:ATCACG Contig628977 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9569:50919_1:N:0:ATCACG Contig493485 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15387:50777_1:N:0:ATCACG Contig149010 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15353:50784_1:N:0:ATCACG Contig149010 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16549:51576_1:N:0:ATCACG Contig14546 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18606:54749_1:N:0:ATCACG Contig339384 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11195:55689_1:N:0:ATCACG Contig191232 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7009:55960_1:N:0:ATCACG Contig1033 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15918:56135_1:N:0:ATCACG Contig211439 1102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11934:56829_1:N:0:ATCACG Contig341230 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14708:57654_1:N:0:ATCACG Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13860:58668_1:N:0:ATCACG Contig250960 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4884:59154_1:N:0:ATCACG Contig29630 3993 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9914:61468_1:N:0:ATCACG Contig34049 3456 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7218:61709_1:N:0:ATCACG Contig573418 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18152:63986_1:N:0:ATCACG Contig156199 239 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5835:64118_1:N:0:ATCACG Contig198635 414 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13909:64789_1:N:0:ATCACG Contig53023 9203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5943:66102_1:N:0:ATCACG Contig512767 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18971:68161_1:N:0:ATCACG Contig676640 300 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7642:68256_1:N:0:ATCACG Contig93734 7001 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4753:69371_1:N:0:ATCACG Contig431770 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2148:70597_1:N:0:ATCACG Contig573103 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12535:71055_1:N:0:ATCACG Contig334754 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4812:72895_1:N:0:ATCACG Contig687035 201 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17145:72984_1:N:0:ATCACG Contig637253 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15831:73262_1:N:0:ATCACG Contig288953 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4591:73915_1:N:0:ATCACG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16473:78286_1:N:0:ATCACG Contig238503 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16553:78403_1:N:0:ATCACG Contig463676 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4141:83267_1:N:0:ATCACG Contig458473 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16625:84459_1:N:0:ATCACG Contig613094 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14494:85245_1:N:0:ATCACG Contig603513 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17180:85714_1:N:0:ATCACG Contig144464 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15865:87550_1:N:0:ATCACG Contig378758 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12675:89508_1:N:0:ATCACG Contig636632 224 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12821:89984_1:N:0:ATCACG Contig26049 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10375:93490_1:N:0:ATCACG Contig676269 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5750:94494_1:N:0:ATCACG Contig562541 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10650:94475_1:N:0:ATCACG Contig74886 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18774:94915_1:N:0:ATCACG Contig269160 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6816:95173_1:N:0:ATCACG Contig205813 1525 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6222:96550_1:N:0:ATCACG Contig664564 112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8333:96613_1:N:0:ATCACG Contig41951 370 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2132:97611_1:N:0:ATCACG Contig423232 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11717:98359_1:N:0:ATCACG Contig328954 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6118:98990_1:N:0:ATCACG Contig303040 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19025:100455_1:N:0:ATCACG Contig68996 9958 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3005:3940_1:N:0:ATCACG Contig44086 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8918:3867_1:N:0:ATCACG Contig72124 9363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13034:4714_1:N:0:ATCACG Contig68810 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9144:5264_1:N:0:ATCACG Contig513829 121 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7037:7818_1:N:0:ATCACG Contig688257 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8592:8757_1:N:0:ATCACG Contig182247 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5811:9801_1:N:0:ATCACG Contig568374 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7107:10091_1:N:0:ATCACG Contig600084 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1632:12067_1:N:0:ATCACG Contig71887 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10315:12783_1:N:0:ATCACG Contig335108 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1282:14316_1:N:0:ATCACG Contig512982 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1578:15076_1:N:0:ATCACG Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9655:15562_1:N:0:ATCACG Contig30655 1639 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17170:15631_1:N:0:ATCACG Contig32976 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6210:17523_1:N:0:ATCACG Contig642414 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4248:18352_1:N:0:ATCACG Contig122701 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2556:19306_1:N:0:ATCACG Contig43880 6705 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6987:19878_1:N:0:ATCACG Contig519196 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18732:21835_1:N:0:ATCACG Contig5662 15487 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12019:22682_1:N:0:ATCACG Contig561083 106 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20459:23400_1:N:0:ATCACG Contig427683 132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11040:25064_1:N:0:ATCACG Contig367894 214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13319:27010_1:N:0:ATCACG Contig690156 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13417:28597_1:N:0:ATCACG Contig344875 112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16802:28708_1:N:0:ATCACG Contig291316 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2876:30500_1:N:0:ATCACG Contig637735 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18027:31677_1:N:0:ATCACG Contig288087 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16169:31784_1:N:0:ATCACG Contig152528 406 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13420:35347_1:N:0:ATCACG Contig672134 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2363:37784_1:N:0:ATCACG Contig271630 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11146:38334_1:N:0:ATCACG Contig359990 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18213:39957_1:N:0:ATCACG Contig243511 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18087:40018_1:N:0:ATCACG Contig568374 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5214:40590_1:N:0:ATCACG Contig408113 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11946:45401_1:N:0:ATCACG Contig52058 3536 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19878:45531_1:N:0:ATCACG Contig402077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9024:45972_1:N:0:ATCACG Contig58406 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4989:46224_1:N:0:ATCACG Contig56716 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2431:46643_1:N:0:ATCACG Contig449308 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11105:48744_1:N:0:ATCACG Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11978:48840_1:N:0:ATCACG Contig248714 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11248:50550_1:N:0:ATCACG Contig75372 2716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18747:50575_1:N:0:ATCACG Contig617625 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8270:51076_1:N:0:ATCACG Contig553625 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9498:51987_1:N:0:ATCACG Contig263569 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4921:52647_1:N:0:ATCACG Contig196877 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13384:54693_1:N:0:ATCACG Contig637551 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7451:57848_1:N:0:ATCACG Contig625707 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10486:58456_1:N:0:ATCACG Contig316799 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10900:58426_1:N:0:ATCACG Contig315471 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8584:58518_1:N:0:ATCACG Contig178875 629 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6977:65738_1:N:0:ATCACG Contig204267 1242 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10370:66470_1:N:0:ATCACG Contig4150 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17310:67980_1:N:0:ATCACG Contig198045 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5737:71650_1:N:0:ATCACG Contig487124 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21214:71723_1:N:0:ATCACG Contig679606 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13844:72877_1:N:0:ATCACG Contig425233 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19086:73055_1:N:0:ATCACG Contig3651 7069 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11138:74403_1:N:0:ATCACG Contig27938 18522 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3731:76044_1:N:0:ATCACG Contig379674 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5908:77906_1:N:0:ATCACG Contig436570 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16547:79564_1:N:0:ATCACG Contig123177 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3102:81903_1:N:0:ATCACG Contig618843 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16420:83162_1:N:0:ATCACG Contig221471 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5147:83991_1:N:0:ATCACG Contig2151 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14118:85148_1:N:0:ATCACG Contig351498 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14419:85055_1:N:0:ATCACG Contig91749 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10381:85259_1:N:0:ATCACG Contig260780 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6210:87026_1:N:0:ATCACG Contig476497 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18927:87334_1:N:0:ATCACG Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13859:88031_1:N:0:ATCACG Contig82776 4205 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10087:89426_1:N:0:ATCACG Contig512380 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3837:89644_1:N:0:ATCACG Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1483:90073_1:N:0:ATCACG Contig180871 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19210:90881_1:N:0:ATCACG Contig654091 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6807:91287_1:N:0:ATCACG Contig427683 132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13950:92572_1:N:0:ATCACG Contig49813 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11104:92907_1:N:0:ATCACG Contig331062 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7387:95704_1:N:0:ATCACG Contig74 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11610:96691_1:N:0:ATCACG Contig98221 1525 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2640:97956_1:N:0:ATCACG Contig245890 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7078:98357_1:N:0:ATCACG Contig28864 27256 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12337:98755_1:N:0:ATCACG Contig308706 265 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14162:98857_1:N:0:ATCACG Contig156638 13243 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13937:100707_1:N:0:ATCACG Contig479887 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10924:7705_1:N:0:ATCACG Contig476380 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12212:8975_1:N:0:ATCACG Contig565990 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1229:15311_1:N:0:ATCACG Contig645616 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13270:15502_1:N:0:ATCACG Contig488370 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7160:16265_1:N:0:ATCACG Contig631016 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13932:18086_1:N:0:ATCACG Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19899:22247_1:N:0:ATCACG Contig642394 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1577:22407_1:N:0:ATCACG Contig194922 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5303:22849_1:N:0:ATCACG Contig209339 1925 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16656:26178_1:N:0:ATCACG Contig44707 8095 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20032:26642_1:N:0:ATCACG Contig59569 5109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13838:29240_1:N:0:ATCACG Contig178183 951 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7951:31239_1:N:0:ATCACG Contig454200 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14001:31284_1:N:0:ATCACG Contig433622 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20025:32596_1:N:0:ATCACG Contig326651 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11313:39188_1:N:0:ATCACG Contig145728 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10593:39830_1:N:0:ATCACG Contig492185 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14326:41926_1:N:0:ATCACG Contig11214 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11473:42926_1:N:0:ATCACG Contig32967 6464 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11035:45332_1:N:0:ATCACG Contig572431 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10266:47036_1:N:0:ATCACG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5905:48299_1:N:0:ATCACG Contig660569 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10684:50139_1:N:0:ATCACG Contig119430 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1379:51086_1:N:0:ATCACG Contig77955 1765 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4095:51440_1:N:0:ATCACG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12708:53975_1:N:0:ATCACG Contig675635 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7208:56597_1:N:0:ATCACG Contig231516 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19952:57815_1:N:0:ATCACG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2806:58361_1:N:0:ATCACG Contig67821 3136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5323:59717_1:N:0:ATCACG Contig454365 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15171:59938_1:N:0:ATCACG Contig178183 951 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10045:61309_1:N:0:ATCACG Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15465:61574_1:N:0:ATCACG Contig690156 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7573:62290_1:N:0:ATCACG Contig213739 1425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4274:62929_1:N:0:ATCACG Contig66675 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16013:62755_1:N:0:ATCACG Contig4058 8822 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15460:65732_1:N:0:ATCACG Contig46726 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6323:66418_1:N:0:ATCACG Contig8329 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16251:66288_1:N:0:ATCACG Contig91749 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5896:69355_1:N:0:ATCACG Contig232722 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9885:69382_1:N:0:ATCACG Contig262857 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20108:72744_1:N:0:ATCACG Contig579908 126 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7609:76292_1:N:0:ATCATG Contig598613 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14207:77771_1:N:0:ATCACG Contig129205 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17704:80330_1:N:0:ATCACG Contig508824 209 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10590:80544_1:N:0:ATCACG Contig260166 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3282:84255_1:N:0:ATCACG Contig53023 9203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19469:84495_1:N:0:ATCACG Contig102835 1345 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7853:87683_1:N:0:ATCACG Contig692833 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15424:87839_1:N:0:ATCACG Contig417335 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20754:88245_1:N:0:ATCACG Contig26431 64865 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20208:88647_1:N:0:ATCACG Contig250604 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4805:89151_1:N:0:ATCACG Contig347934 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7392:89705_1:N:0:ATCACG Contig598079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3154:90271_1:N:0:ATCACG Contig328267 273 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8242:90251_1:N:0:ATCACG Contig25284 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4958:92080_1:N:0:ATCACG Contig24949 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15783:92080_1:N:0:ATCACG Contig379249 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15796:92085_1:N:0:ATCACG Contig379249 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17475:93604_1:N:0:ATCACG Contig109565 864 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4556:94324_1:N:0:ATCACA Contig105211 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17278:95499_1:N:0:ATCACG Contig10077 1732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5796:95550_1:N:0:ATCACG Contig14819 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12157:95886_1:N:0:ATCACG Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14488:97277_1:N:0:ATCACG Contig1548 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5241:98460_1:N:0:ATCACG Contig332501 198 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14220:99326_1:N:0:ATCACG Contig51703 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5939:3972_1:N:0:ATCACG Contig181046 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11100:5545_1:N:0:ATCACG Contig341373 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9587:8441_1:N:0:ATCACG Contig397203 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6800:10808_1:N:0:ATCACG Contig622320 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15493:12587_1:N:0:ATCACG Contig478091 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6667:13634_1:N:0:ATCACG Contig357315 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17208:15406_1:N:0:ATCACG Contig552872 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1411:16003_1:N:0:ATCACG Contig466091 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1807:17870_1:N:0:ATCACG Contig128909 3374 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16420:17857_1:N:0:ATCACG Contig453452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14592:22250_1:N:0:ATCACG Contig16985 787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20448:23050_1:N:0:ATCACG Contig554726 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3984:23289_1:N:0:ATCACG Contig80896 2001 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13125:25150_1:N:0:ATCACG Contig516916 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7194:28506_1:N:0:ATCACG Contig116148 1295 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8340:30204_1:N:0:ATCACG Contig236904 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5072:30450_1:N:0:ATCACG Contig205642 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21225:30653_1:N:0:ATCACG Contig110194 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4936:32479_1:N:0:ATCACG Contig349501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7589:32530_1:N:0:ATCACG Contig401584 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2168:37116_1:N:0:ATCACG Contig1200 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13815:38148_1:N:0:ATCACG Contig600751 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16492:40613_1:N:0:ATCACG Contig179806 470 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4092:42644_1:N:0:ATCACG Contig254250 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5635:42657_1:N:0:ATCACG Contig467201 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13161:42590_1:N:0:ATCACG Contig119155 26788 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18041:45746_1:N:0:ATCACG Contig26049 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8985:46097_1:N:0:ATCACG Contig95152 1485 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6424:46882_1:N:0:ATCACG Contig617335 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11536:47425_1:N:0:ATCACG Contig188238 1945 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3345:47550_1:N:0:ATCACG Contig422159 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9878:48130_1:N:0:ATCACG Contig340208 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8002:48896_1:N:0:ATCACG Contig365372 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10693:49690_1:N:0:ATCACG Contig50451 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6265:50278_1:N:0:ATCACG Contig395289 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14703:50958_1:N:0:ATCACG Contig93775 1630 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8472:54781_1:N:0:ATCACG Contig611330 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9177:54941_1:N:0:ATCACG Contig309170 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20936:56261_1:N:0:ATCACG Contig298345 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13716:57998_1:N:0:ATCACG Contig280945 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16971:58516_1:N:0:ATCACG Contig534865 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20960:59211_1:N:0:ATCACG Contig625279 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6392:60686_1:N:0:ATCACG Contig158704 1089 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20385:60928_1:N:0:ATCACG Contig690156 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16895:61142_1:N:0:ATCACG Contig52594 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17747:61746_1:N:0:ATCACG Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10393:62773_1:N:0:ATCACG Contig435 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7776:63069_1:N:0:ATCACG Contig164275 437 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11369:63014_1:N:0:ATCACG Contig655851 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10597:63331_1:N:0:ATCACG Contig673515 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8133:63662_1:N:0:ATCACG Contig179806 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14386:64093_1:N:0:ATCACG Contig390735 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4904:65339_1:N:0:ATCACG Contig63821 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7282:67836_1:N:0:ATCACG Contig399988 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2557:70685_1:N:0:ATCACG Contig243497 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6291:71506_1:N:0:ATCACG Contig244443 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7695:72014_1:N:0:ATCACG Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7594:73064_1:N:0:ATCACG Contig339581 592 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13397:74199_1:N:0:ATCACG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18912:74663_1:N:0:ATCACG Contig538625 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3642:74927_1:N:0:ATCACG Contig76256 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18954:75058_1:N:0:ATCACG Contig622798 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12332:76507_1:N:0:ATCACG Contig185107 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16376:80331_1:N:0:ATCACG Contig355919 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9395:81490_1:N:0:ATCACG Contig539186 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10166:82093_1:N:0:ATCACG Contig61695 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13509:83681_1:N:0:ATCACG Contig265350 180 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5385:84083_1:N:0:ATCACG Contig310027 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4237:84709_1:N:0:ATCACG Contig447780 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5972:84907_1:N:0:ATCACG Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20660:85098_1:N:0:ATCACG Contig338556 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20829:85106_1:N:0:ATCACG Contig54452 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19504:85477_1:N:0:ATCACG Contig483238 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1727:87147_1:N:0:ATCACG Contig654451 111 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16636:87356_1:N:0:ATCACG Contig137089 1038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18719:90449_1:N:0:ATCACG Contig203549 1148 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11428:91443_1:N:0:ATCACG Contig407304 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8893:92109_1:N:0:ATCACG Contig617279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9269:92685_1:N:0:ATCACG Contig211506 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13591:93268_1:N:0:ATCACG Contig308921 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12429:93515_1:N:0:ATCACG Contig110860 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4417:95508_1:N:0:ATCACG Contig53528 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3308:96426_1:N:0:ATCACG Contig39374 398 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13009:98876_1:N:0:ATCACG Contig86935 2023 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3706:100044_1:N:0:ATCACG Contig87970 8051 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20301:2235_1:N:0:ATCACG Contig132109 5282 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7564:2655_1:N:0:ATCACG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19064:2959_1:N:0:ATCACG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20756:2803_1:N:0:ATCACG Contig271009 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14101:5346_1:N:0:ATCACG Contig125259 1317 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8966:8270_1:N:0:ATCACG Contig330000 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12380:9808_1:N:0:ATCACG Contig458752 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18934:9931_1:N:0:ATCACG Contig8946 1926 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5044:11166_1:N:0:ATCACG Contig283049 442 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6448:11945_1:N:0:ATCACG Contig172694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11113:12861_1:N:0:ATCACG Contig170350 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13144:13464_1:N:0:ATCACG Contig44216 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6021:15041_1:N:0:ATCACG Contig24176 345 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19445:17315_1:N:0:ATCACG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2335:17676_1:N:0:ATCACG Contig325954 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3547:19741_1:N:0:ATCACG Contig56777 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13036:19548_1:N:0:ATCACG Contig268182 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8804:19785_1:N:0:ATCACG Contig279398 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1741:22104_1:N:0:ATCACG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16594:22401_1:N:0:ATCACG Contig559707 329 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17462:22338_1:N:0:ATCACG Contig167850 590 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1512:22877_1:N:0:ATCACG Contig102838 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5380:23278_1:N:0:ATCACG Contig368019 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18557:25018_1:N:0:ATCACG Contig402431 132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12021:25797_1:N:0:ATCACG Contig676633 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14789:26352_1:N:0:ATCACG Contig478525 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2246:27033_1:N:0:ATCACG Contig159471 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14532:30108_1:N:0:ATCACG Contig602857 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19829:32365_1:N:0:ATCACG Contig9137 6894 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1672:33890_1:N:0:ATCACG Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11727:33997_1:N:0:ATCACG Contig642301 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1748:34746_1:N:0:ATCACG Contig401196 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11788:35190_1:N:0:ATCACG Contig110194 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15417:35590_1:N:0:ATCACG Contig17375 666 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9977:38114_1:N:0:ATCACG Contig85594 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14471:39481_1:N:0:ATCACG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20045:39709_1:N:0:ATCACG Contig372243 160 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1731:40636_1:N:0:ATCACG Contig667907 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17163:40723_1:N:0:ATCACG Contig598079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3893:42216_1:N:0:ATCACG Contig572129 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18719:43677_1:N:0:ATCACG Contig15974 2999 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11715:45232_1:N:0:ATCACG Contig538657 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10936:46074_1:N:0:ATCACG Contig657013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8193:47462_1:N:0:ATCACG Contig694092 118 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2494:47617_1:N:0:ATCACG Contig502258 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9798:47990_1:N:0:ATCACG Contig129205 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11556:48667_1:N:0:ATCACG Contig210354 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16173:48746_1:N:0:ATCACG Contig67821 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14943:50442_1:N:0:ATCACG Contig28478 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11106:51159_1:N:0:ATCACG Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14694:51217_1:N:0:ATCACG Contig145853 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7061:51269_1:N:0:ATCACG Contig418030 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2989:51638_1:N:0:ATCACG Contig326435 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14272:54182_1:N:0:ATCACG Contig134290 1092 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12592:55012_1:N:0:ATCACG Contig128149 1465 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14883:55212_1:N:0:ATCACG Contig428100 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:21127:56708_1:N:0:ATCACG Contig636666 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10744:56818_1:N:0:ATCACG Contig614144 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3419:57914_1:N:0:ATCACG Contig567455 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11213:59935_1:N:0:ATCACG Contig319439 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5744:63362_1:N:0:ATCACG Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:21038:65837_1:N:0:ATGACG Contig467490 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16884:66168_1:N:0:ATCACG Contig652400 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11785:67275_1:N:0:ATCACG Contig597754 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15275:67303_1:N:0:ATCACG Contig216935 747 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13301:67836_1:N:0:ATCACG Contig175015 755 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16374:68296_1:N:0:ATCACG Contig328183 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4513:68718_1:N:0:ATCACG Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12187:69308_1:N:0:ATCACG Contig211945 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18891:71471_1:N:0:ATCACG Contig572456 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16079:74236_1:N:0:ATCACG Contig57447 3326 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9148:74693_1:N:0:ATCACG Contig410851 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9503:75079_1:N:0:ATCACG Contig315784 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19992:75909_1:N:0:ATCACG Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14567:76006_1:N:0:ATCACG Contig410765 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18678:77656_1:N:0:ATCACG Contig581906 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15824:79079_1:N:0:ATCACG Contig572150 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17041:79356_1:N:0:ATCACG Contig140341 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1403:79634_1:N:0:ATCACG Contig54040 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15675:81682_1:N:0:ATCACG Contig120734 2360 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7480:82368_1:N:0:ATCACG Contig111171 6771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7515:82375_1:N:0:ATCACG Contig111171 6771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16628:83043_1:N:0:ATCACG Contig48797 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18858:85920_1:N:0:ATCACG Contig302024 129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13474:87315_1:N:0:ATCACG Contig200528 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2239:89023_1:N:0:ATCACG Contig598079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20811:90332_1:N:0:ATCACG Contig340208 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5609:91250_1:N:0:ATCACG Contig649984 165 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17634:91208_1:N:0:ATCACG Contig310077 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16756:91370_1:N:0:ATCACG Contig138338 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7008:91934_1:N:0:ATCACG Contig457488 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1889:92764_1:N:0:ATCACG Contig251828 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8987:93454_1:N:0:ATCACG Contig203034 485 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12462:95272_1:N:0:ATCACG Contig392759 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19138:97453_1:N:0:ATCACG Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2622:98114_1:N:0:ATCACG Contig484374 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19452:98031_1:N:0:ATCACG Contig140867 1336 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1693:99625_1:N:0:ATCACG Contig298153 304 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13554:100826_1:N:0:ATCACG Contig88252 5309 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7195:4097_1:N:0:ATCACG Contig454885 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20925:4130_1:N:0:ATCACG Contig464425 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:8418:4289_1:N:0:ATCACG Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7609:12747_1:N:0:ATCACG Contig52883 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:17296:13298_1:N:0:ATCACG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18783:13704_1:N:0:ATCACG Contig178183 951 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18885:13894_1:N:0:ATCACG Contig486727 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:8076:15398_1:N:0:ATCACG Contig160526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7177:16950_1:N:0:ATCACG Contig569910 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:13980:17375_1:N:0:ATCACG Contig574936 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16256:17925_1:N:0:ATCACG Contig618292 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:4756:21102_1:N:0:ATCACG Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:2344:21901_1:N:0:ATCACG Contig213533 930 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16876:22545_1:N:0:ATCACG Contig99807 3834 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7037:22871_1:N:0:ATCACG Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:8907:23554_1:N:0:ATCACG Contig472890 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3325:25342_1:N:0:ATCACG Contig500144 128 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:9813:25575_1:N:0:ATCACG Contig7844 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1614:28037_1:N:0:ATCACG Contig146112 2013 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:9840:28344_1:N:0:ATCACG Contig46982 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1609:28961_1:N:0:ATCACG Contig518065 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:9083:29153_1:N:0:ATCACG Contig634792 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:13739:30065_1:N:0:ATCACG Contig133579 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:8171:30748_1:N:0:ATCACG Contig113399 883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1596:33672_1:N:0:ATCACG Contig628410 117 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:12723:33741_1:N:0:ATCACG Contig200542 2475 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:5291:34560_1:N:0:ATCACG Contig190979 802 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19716:35761_1:N:0:ATCACG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7549:37516_1:N:0:ATCACG Contig118861 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3853:39562_1:N:0:ATCACG Contig345919 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3668:41068_1:N:0:ATCACA Contig399688 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:5107:41221_1:N:0:ATCACG Contig287273 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:4301:41626_1:N:0:ATCACG Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:2768:45281_1:N:0:ATCACG Contig51452 7799 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3618:46180_1:N:0:ATCACG Contig301540 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:2174:46883_1:N:0:ATCACG Contig306730 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:2509:48203_1:N:0:ATCACG Contig77722 6580 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20988:48150_1:N:0:ATCACG Contig629945 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:12998:48479_1:N:0:ATCACG Contig166245 1482 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20951:49142_1:N:0:ATCACG Contig568374 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18294:51501_1:N:0:ATCACG Contig345418 145 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20025:52244_1:N:0:ATCACG Contig526460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3028:54380_1:N:0:ATCACG Contig574235 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16509:55972_1:N:0:ATCACG Contig315618 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19783:56490_1:N:0:ATCACG Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3151:57226_1:N:0:ATCACG Contig658195 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:8590:57376_1:N:0:ATCACG Contig623043 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:14991:60087_1:N:0:ATCACG Contig258676 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16116:60369_1:N:0:ATCACG Contig366056 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16822:60275_1:N:0:ATCACG Contig623906 320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7642:61803_1:N:0:ATCACG Contig22900 28602 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:11734:61806_1:N:0:ATCACG Contig352277 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20622:61836_1:N:0:ATCACG Contig345930 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:4474:62258_1:N:0:ATCACG Contig218635 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18650:63490_1:N:0:ATCACG Contig46712 6253 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:11722:64768_1:N:0:ATCACG Contig457780 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3792:67820_1:N:0:ATCACG Contig384268 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:17653:68937_1:N:0:ATCACG Contig439573 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7857:69777_1:N:0:ATCACG Contig301173 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:17784:69785_1:N:0:ATCACG Contig55590 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1880:73505_1:N:0:ATCACG Contig287122 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:10752:74243_1:N:0:ATCACG Contig285119 182 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:12103:74262_1:N:0:ATCACG Contig367943 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1472:74551_1:N:0:ATCACG Contig460670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:5382:74918_1:N:0:ATCACG Contig9323 1624 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:2747:75649_1:N:0:ATCACG Contig379298 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:12869:78733_1:N:0:ATCACG Contig63536 9413 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:2891:80554_1:N:0:ATCACG Contig61666 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7961:80502_1:N:0:ATCACG Contig259256 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:10437:80547_1:N:0:ATCACG Contig82972 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:11324:80839_1:N:0:ATCACG Contig587867 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1762:82248_1:N:0:ATCACG Contig27322 3521 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3787:83130_1:N:0:ATCACG Contig36268 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:4657:83585_1:N:0:ATCACG Contig295496 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18395:85951_1:N:0:ATCACG Contig436335 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:17370:86062_1:N:0:ATCACG Contig12407 965 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1201:86860_1:N:0:ATCACG Contig302359 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18012:87255_1:N:0:ATCACG Contig531173 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16326:89024_1:N:0:ATCACG Contig575667 1041 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:4157:92411_1:N:0:ATCACG Contig510283 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1995:93894_1:N:0:ATCACG Contig98081 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19768:94582_1:N:0:ATCACG Contig619856 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3910:95706_1:N:0:ATCACG Contig482041 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:8476:96178_1:N:0:ATCACG Contig616288 391 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20961:96104_1:N:0:ATCACG Contig137206 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:15390:96370_1:N:0:ATCACG Contig238624 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20604:96679_1:N:0:ATCACG Contig632311 136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:10537:98810_1:N:0:ATCACG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:15545:98916_1:N:0:ATCACG Contig52673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:6322:2364_1:N:0:ATCACG Contig212165 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:3118:3752_1:N:0:ATCACG Contig14689 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:4946:3793_1:N:0:ATCACG Contig542642 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:11164:4400_1:N:0:ATCACG Contig347987 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:20358:5435_1:N:0:ATCACG Contig118556 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:10926:5997_1:N:0:ATCACG Contig189418 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:20939:6180_1:N:0:ATCACG Contig126385 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:9982:7636_1:N:0:ATCACG Contig173061 1158 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:15191:8258_1:N:0:ATCACG Contig641200 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:11462:9375_1:N:0:ATCACG Contig574750 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:7630:10134_1:N:0:ATCACG Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:12283:11528_1:N:0:ATCACG Contig671104 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:4108:13297_1:N:0:ATCACG Contig300694 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:16605:14200_1:N:0:ATCACG Contig560004 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:18741:15261_1:N:0:ATCACG Contig474901 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:1117:16807_1:N:0:ATCACG Contig637386 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:5233:17345_1:N:0:ATCACG Contig417066 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:9161:18015_1:N:0:ATCACG Contig257530 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:5673:20086_1:N:0:ATCACG Contig186958 845 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:13759:20793_1:N:0:ATCACG Contig221011 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:9050:22048_1:N:0:ATCACG Contig385341 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:11585:23719_1:N:0:ATCACG Contig690108 338 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:3760:24510_1:N:0:ATCACG Contig285268 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:11650:24879_1:N:0:ATCACG Contig61463 7252 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:16732:25202_1:N:0:ATCACG Contig433142 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:5768:26171_1:N:0:ATCACG Contig167863 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:3560:26455_1:N:0:ATCACG Contig608154 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:11095:26417_1:N:0:ATCACG Contig117977 180 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1111:18938:26892_1:N:0:ATCACG Contig679820 73 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 363675 (36.37%) aligned 0 times 220081 (22.01%) aligned exactly 1 time 416244 (41.62%) aligned >1 times 63.63% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 791762 (79.18%) aligned 0 times 109464 (10.95%) aligned exactly 1 time 98774 (9.88%) aligned >1 times 20.82% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 792556 (79.26%) aligned 0 times 109167 (10.92%) aligned exactly 1 time 98277 (9.83%) aligned >1 times 20.74% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 363567 (36.36%) aligned 0 times 218994 (21.90%) aligned exactly 1 time 417439 (41.74%) aligned >1 times 63.64% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 1_ATCACG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 1_ATCACG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 402696 Mapping efficiency: 40.3% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2271556 Total methylated C's in CpG context: 89270 Total methylated C's in CHG context: 6460 Total methylated C's in CHH context: 118528 Total methylated C's in Unknown context: 31 Total unmethylated C's in CpG context: 220987 Total unmethylated C's in CHG context: 414387 Total unmethylated C's in CHH context: 1421924 Total unmethylated C's in Unknown context: 389 C methylated in CpG context: 28.8% C methylated in CHG context: 1.5% C methylated in CHH context: 7.7% C methylated in Unknown context (CN or CHN): 7.4% Bismark completed in 0d 0h 22m 37s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/2_CGATGT_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 2_CGATGT_L001_R1_001_trimmed.fq.gz to 2_CGATGT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 2_CGATGT_L001_R1_001_trimmed.fq.gz to 2_CGATGT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 2_CGATGT_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 2_CGATGT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 2_CGATGT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 2_CGATGT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1167:2169_1:N:0:CGATGT 0 Contig89802_CT_converted 3947 1 31M * 0 0 GATTTTTTAATTATGATAATTTGTTTATTTT HFHIJJIJJIIHEHGGIIJJGGIGIJJIIIJ AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for CTreadGAgenome (reading in sequences from 2_CGATGT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1167:2169_1:N:0:CGATGT 16 Contig54799_GA_converted 25022 1 31M * 0 0 AAAATAAACAAATTATCATAATTAAAAAATC JIIIJJIGIGGJJIIGGHEHIIJJIJJIHFH AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadCTgenome (reading in sequences from 2_CGATGT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1167:2169_1:N:0:CGATGT 4 * 0 0 * * 0 0 AATTTTTTAATTATAATAATTTATTTATTTT HFHIJJIJJIIHEHGGIIJJGGIGIJJIIIJ YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 2_CGATGT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1167:2169_1:N:0:CGATGT 4 * 0 0 * * 0 0 AATTTTTTAATTATAATAATTTATTTATTTT HFHIJJIJJIIHEHGGIIJJGGIGIJJIIIJ YT:Z:UU >>> Writing bisulfite mapping results to 2_CGATGT_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/2_CGATGT_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21204:3032_1:N:0:CGATGT Contig322052 403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16665:6950_1:N:0:CGATGT Contig517180 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7589:8353_1:N:0:CGATGT Contig527534 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10304:8362_1:N:0:CGATGT Contig312162 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16352:9364_1:N:0:CGATGT Contig133654 3854 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6810:9744_1:N:0:CGATGT Contig93742 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21051:9568_1:N:0:CGATGT Contig557455 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20856:11523_1:N:0:CGATGT Contig345113 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5240:11774_1:N:0:CGATGT Contig95356 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19006:12167_1:N:0:CGATGT Contig226780 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11190:12444_1:N:0:CGATGT Contig177153 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9552:13225_1:N:0:CGATGT Contig455746 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4036:14154_1:N:0:CGATGT Contig52673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12764:14204_1:N:0:CGATGT Contig130996 2210 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16632:16138_1:N:0:CGATGT Contig252221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6727:18481_1:N:0:CGATGT Contig19038 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17628:18949_1:N:0:CGATGT Contig54975 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18187:20038_1:N:0:CGATGT Contig488312 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13319:21518_1:N:0:CGATGT Contig42134 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15194:21600_1:N:0:CGATGT Contig307743 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11121:23326_1:N:0:CGATGT Contig690219 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13109:24345_1:N:0:CGATGT Contig7020 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13070:25655_1:N:0:CGATGT Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5046:26865_1:N:0:CGATGT Contig16748 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19017:29106_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3810:34055_1:N:0:CGATGT Contig262483 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15079:34857_1:N:0:CGATGT Contig590020 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9976:35275_1:N:0:CGATGT Contig208406 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1256:35516_1:N:0:CGATGT Contig135488 2214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8930:37249_1:N:0:CGATGT Contig553555 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11040:37325_1:N:0:CGATGT Contig584703 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6769:37669_1:N:0:CGATGT Contig224520 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6649:38270_1:N:0:CGATGT Contig670177 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11975:38507_1:N:0:CGATGT Contig81493 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10356:39362_1:N:0:CGATGT Contig267885 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14001:39311_1:N:0:CGATGT Contig321491 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12894:39759_1:N:0:CGATGT Contig282812 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8130:40683_1:N:0:CGATGT Contig181492 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6332:40901_1:N:0:CGATGT Contig277889 142 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5941:42352_1:N:0:CGATGC Contig594240 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16927:44205_1:N:0:CGATGT Contig108449 1169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4586:45878_1:N:0:CGATGT Contig138148 822 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21132:46531_1:N:0:CGATGT Contig622798 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8544:47849_1:N:0:CGATGT Contig59667 9630 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17871:49209_1:N:0:CGATGT Contig525422 329 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3467:51282_1:N:0:CGATGT Contig241113 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13422:52451_1:N:0:CGATGT Contig659317 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5443:54196_1:N:0:CGATGT Contig668722 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18659:54757_1:N:0:CGATGT Contig565844 462 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12054:55641_1:N:0:CGATGT Contig288558 1165 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9529:56252_1:N:0:CGATGT Contig279673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15865:57286_1:N:0:CGATGT Contig107152 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4726:58381_1:N:0:CGATGT Contig536932 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15508:58791_1:N:0:CGATGT Contig600125 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21138:59226_1:N:0:CGATGT Contig340642 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10375:59921_1:N:0:CGATGT Contig579591 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3089:62122_1:N:0:CGATGT Contig28864 27255 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4183:62684_1:N:0:CGATGT Contig216355 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16218:65295_1:N:0:CGATGT Contig474461 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1189:65530_1:N:0:CGATGT Contig397146 363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1160:67248_1:N:0:CGATGT Contig61252 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15775:68765_1:N:0:CGATGT Contig418019 202 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20014:70252_1:N:0:CGATGT Contig166456 730 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16666:70954_1:N:0:CGATGT Contig141690 1245 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18462:70780_1:N:0:CGATGT Contig420610 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3210:71877_1:N:0:CGATGT Contig368268 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17294:72561_1:N:0:CGATGT Contig46469 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6400:75020_1:N:0:CGATGT Contig601866 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6779:76647_1:N:0:CGATGT Contig551859 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7073:76928_1:N:0:CGATGT Contig605214 121 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12159:77043_1:N:0:CGATGT Contig48997 34081 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17141:77163_1:N:0:CGATGT Contig121448 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4182:77788_1:N:0:CGATGT Contig382759 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15688:78991_1:N:0:CGATGT Contig63990 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13355:80982_1:N:0:CGATGT Contig333917 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1103:82074_1:N:0:CGATGT Contig165125 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21112:82247_1:N:0:CGATGT Contig573096 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17791:82295_1:N:0:CGATGT Contig84752 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12249:82655_1:N:0:CGATGT Contig113133 1412 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5003:83822_1:N:0:CGATGT Contig158250 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17257:84535_1:N:0:CGATGT Contig556038 409 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13996:85497_1:N:0:CGATGT Contig36213 43292 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17491:86016_1:N:0:CGATGT Contig218980 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20638:86067_1:N:0:CGATGT Contig387289 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4840:87589_1:N:0:CGATGT Contig7833 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9187:90796_1:N:0:CGATGT Contig396501 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4142:91805_1:N:0:CGATGT Contig549480 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4095:93303_1:N:0:CGATGT Contig225560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14277:93362_1:N:0:CGATGT Contig271437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11366:94209_1:N:0:CGATGT Contig136803 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9533:96794_1:N:0:CGATGT Contig111597 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5070:98216_1:N:0:CGATGT Contig657184 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15537:101000_1:N:0:CGATGT Contig679507 189 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1447:2862_1:N:0:CGATGT Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17468:4301_1:N:0:CGATGT Contig463006 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5574:4889_1:N:0:CGATGT Contig210378 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7676:5561_1:N:0:CGATGT Contig236325 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9812:5540_1:N:0:CGATGT Contig371017 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19439:5930_1:N:0:CGATGT Contig543309 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14158:6533_1:N:0:CGATGT Contig164539 739 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2894:7955_1:N:0:CGATGT Contig542746 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4465:7862_1:N:0:CGATGT Contig287817 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4496:7883_1:N:0:CGATGT Contig287817 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4465:7903_1:N:0:CGATGT Contig287817 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19957:8268_1:N:0:CGATGT Contig91984 1491 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7905:9518_1:N:0:CGATGT Contig183189 607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2147:9785_1:N:0:CGATGT Contig428748 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17053:10678_1:N:0:CGATGT Contig234001 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14165:11305_1:N:0:CGATGT Contig383077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2022:13567_1:N:0:CGATGT Contig380042 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5240:14242_1:N:0:CGATGT Contig376171 299 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18810:16314_1:N:0:CGATGT Contig177874 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2646:20059_1:N:0:CGATGT Contig645455 578 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18303:22347_1:N:0:CGATGT Contig417636 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1201:24737_1:N:0:CGATGT Contig406779 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6469:25060_1:N:0:CGATGT Contig342405 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11809:25498_1:N:0:CGATGT Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14039:28005_1:N:0:CGATGT Contig379249 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10898:28938_1:N:0:CGATGT Contig271136 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5887:29628_1:N:0:CGATGT Contig537341 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9503:34415_1:N:0:CGATGT Contig146877 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17706:34300_1:N:0:CGATGT Contig299960 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6218:35743_1:N:0:CGATGT Contig79305 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14128:37156_1:N:0:CGATGT Contig203279 847 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7805:38755_1:N:0:CGATGT Contig615795 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3355:39109_1:N:0:CGATGT Contig440005 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17035:44233_1:N:0:CGATGT Contig512300 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16133:46567_1:N:0:CGATGT Contig298950 271 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10374:47400_1:N:0:CGATGT Contig289669 367 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16650:48919_1:N:0:CGATGT Contig22197 6039 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16785:49282_1:N:0:CGATGT Contig313675 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17399:51016_1:N:0:CGATGT Contig16324 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8117:53659_1:N:0:CGATGT Contig561977 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14254:54495_1:N:0:CGATGT Contig343303 185 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17388:55578_1:N:0:CGATGT Contig275407 184 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5301:55759_1:N:0:CGATGT Contig536185 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16157:56123_1:N:0:CGATGT Contig52820 12646 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14488:56568_1:N:0:CGATGT Contig569051 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11219:60226_1:N:0:CGATGT Contig28913 2787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17785:60105_1:N:0:CGATGT Contig297835 141 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13719:61249_1:N:0:CGATGT Contig665672 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2119:63096_1:N:0:CGATGT Contig585321 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5168:65409_1:N:0:CGATGT Contig243625 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11351:65492_1:N:0:CGATGT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18916:66150_1:N:0:CGATGT Contig327554 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1874:66894_1:N:0:CGATGT Contig330338 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20632:66861_1:N:0:CGATGT Contig16849 12309 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2154:68957_1:N:0:CGATGT Contig596429 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12164:68979_1:N:0:CGATGT Contig165102 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16756:70354_1:N:0:CGATGT Contig248441 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3375:70728_1:N:0:CGATGT Contig273068 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9651:72063_1:N:0:CGATGT Contig245735 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11569:73209_1:N:0:CGATGT Contig508610 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5975:73744_1:N:0:CGATGT Contig422060 194 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1377:76963_1:N:0:CGATGT Contig533263 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11005:77440_1:N:0:CGATGT Contig174064 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16502:77379_1:N:0:CGATGT Contig574431 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7446:81554_1:N:0:CGATGT Contig646713 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10590:81518_1:N:0:CGATGT Contig662769 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20431:81920_1:N:0:CGATGT Contig205088 825 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1232:83392_1:N:0:CGATGT Contig4671 11395 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12137:87649_1:N:0:CGATGT Contig149883 4023 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13669:88727_1:N:0:CGATGT Contig575772 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12305:89009_1:N:0:CGATGT Contig206982 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12169:90623_1:N:0:CGATGT Contig205212 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5303:91476_1:N:0:CGATGT Contig556038 407 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5673:91363_1:N:0:CGATGT Contig660750 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4731:92154_1:N:0:CGATGT Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11143:92735_1:N:0:CGATGT Contig145309 3210 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6845:93760_1:N:0:CGATGT Contig11785 174 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15035:94371_1:N:0:CGATGT Contig319929 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7907:96921_1:N:0:CGATGT Contig201640 420 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4040:99099_1:N:0:CGATGT Contig661099 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4664:99067_1:N:0:CGATGT Contig267041 150 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10057:99893_1:N:0:CGATGT Contig108449 1169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18569:100201_1:N:0:CGATGT Contig410657 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13561:3838_1:N:0:CGATGT Contig213426 7245 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15720:7792_1:N:0:CGATGT Contig346842 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6601:10197_1:N:0:CGATGT Contig299365 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14487:12744_1:N:0:CGATGT Contig218578 446 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9832:14802_1:N:0:CGATGT Contig671433 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18778:15494_1:N:0:CGATGT Contig293433 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2912:15581_1:N:0:CGATGT Contig671884 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4615:16814_1:N:0:CGATGT Contig350123 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3362:18490_1:N:0:CGATGT Contig89586 1068 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9905:19451_1:N:0:CGATGT Contig641690 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5757:20443_1:N:0:CGATGT Contig135488 2214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21224:20322_1:N:0:CGATGT Contig589599 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13343:20974_1:N:0:CGATGT Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7701:21839_1:N:0:CGATGT Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4322:22056_1:N:0:CGATGT Contig252927 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13637:22018_1:N:0:CGATGT Contig367550 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14642:22878_1:N:0:CGATGT Contig363076 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14315:23452_1:N:0:CGATGT Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5611:23544_1:N:0:CGATGT Contig154943 771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5599:23577_1:N:0:CGATGT Contig154943 771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16112:23673_1:N:0:CGATGT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4735:24159_1:N:0:CGATGT Contig583767 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12089:24965_1:N:0:CGATGT Contig63078 8606 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17660:25066_1:N:0:CGATGT Contig12277 218 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18445:26453_1:N:0:CGATGT Contig642647 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18787:26829_1:N:0:CGATGT Contig258423 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3841:28689_1:N:0:CGATGT Contig572941 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15877:28559_1:N:0:CGATGT Contig10151 1979 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6376:28793_1:N:0:CGATGT Contig87676 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20406:29121_1:N:0:CGATGT Contig607134 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8454:29827_1:N:0:CGATGT Contig58406 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8828:32156_1:N:0:CGATGT Contig235362 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8563:33737_1:N:0:CGATGT Contig56875 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12684:34221_1:N:0:CGATGT Contig351256 129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4647:35600_1:N:0:CGATGT Contig77043 2598 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13823:38273_1:N:0:CGATGT Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18040:39279_1:N:0:CGATGT Contig199610 756 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18077:39294_1:N:0:CGATGT Contig199610 756 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8110:40453_1:N:0:CGATGT Contig222128 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20484:41037_1:N:0:CGATGT Contig452192 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3491:42174_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12719:42052_1:N:0:CGATGT Contig357869 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11035:42925_1:N:0:CGATGT Contig50320 19246 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15255:43690_1:N:0:CGATGT Contig135495 1650 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17228:44626_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20188:46802_1:N:0:CGATGT Contig527538 149 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4206:50449_1:N:0:CGATGT Contig166447 712 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6011:50674_1:N:0:CGATGT Contig290221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5467:54003_1:N:0:CGATGT Contig360581 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1763:54358_1:N:0:CGATGT Contig100960 9393 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17458:55074_1:N:0:CGATGT Contig10151 1981 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18983:56349_1:N:0:CGATGT Contig244947 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5032:57195_1:N:0:CGATGT Contig441527 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5073:57379_1:N:0:CGATGT Contig322856 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16524:57870_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15522:58236_1:N:0:CGATGT Contig263754 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17822:59106_1:N:0:CGATTT Contig341236 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21039:60176_1:N:0:CGATGT Contig512468 4704 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15967:61244_1:N:0:CGATGT Contig129461 2286 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16464:62977_1:N:0:CGATGT Contig371521 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19706:62879_1:N:0:CGATGA Contig15438 385 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5213:64301_1:N:0:CGATGT Contig684219 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12821:65757_1:N:0:CGATGT Contig187556 736 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6264:67496_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1986:67629_1:N:0:CGATGT Contig371982 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10392:71908_1:N:0:CGATGT Contig391203 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10407:71941_1:N:0:CGATGT Contig391203 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19014:71811_1:N:0:CGATGT Contig197257 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11515:72821_1:N:0:CGATGT Contig579354 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19422:73277_1:N:0:CGATGT Contig328797 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1413:74720_1:N:0:CGATGT Contig176386 464 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7602:76656_1:N:0:CGATGT Contig411073 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15922:80521_1:N:0:CGATGT Contig335108 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9019:82235_1:N:0:CGATGT Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5072:83230_1:N:0:CGATGT Contig36263 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1152:83909_1:N:0:CGATGT Contig88007 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9951:83830_1:N:0:CGATGT Contig15656 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6401:86063_1:N:0:CGATGT Contig609188 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20892:86213_1:N:0:CGATGT Contig265711 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20704:87984_1:N:0:CGATGT Contig363124 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15557:88261_1:N:0:CGATGT Contig285851 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6887:89364_1:N:0:CGATGT Contig679613 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19524:91027_1:N:0:CGATGT Contig351188 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14596:92289_1:N:0:CGATGT Contig108449 1170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1185:93301_1:N:0:CGATGT Contig109947 2284 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14725:94627_1:N:0:CGATGT Contig152558 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9647:94896_1:N:0:CGATGT Contig193747 509 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18083:97836_1:N:0:CGAAGT Contig205529 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6831:98779_1:N:0:CGATGT Contig229260 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21046:99472_1:N:0:CGATGT Contig90954 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17501:100378_1:N:0:CGATGT Contig421515 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10732:100973_1:N:0:CGATGT Contig423609 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20395:4729_1:N:0:CGATGT Contig481919 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7002:5017_1:N:0:CGATGT Contig572994 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10319:5091_1:N:0:CGATGT Contig552207 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5156:5534_1:N:0:GGATGT Contig107729 980 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6499:6782_1:N:0:CGATGT Contig511581 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7378:7195_1:N:0:CGATGT Contig148531 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5135:7844_1:N:0:CGATGT Contig146049 392 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3204:8609_1:N:0:CGATGT Contig345073 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15060:9988_1:N:0:CGATGT Contig81239 2277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16209:10117_1:N:0:CGATGT Contig164003 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12155:10392_1:N:0:CGATGT Contig49104 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15564:11523_1:N:0:CGATGT Contig74793 2537 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8892:12028_1:N:0:CGATGT Contig467912 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13124:14783_1:N:0:CGATGT Contig140091 729 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7705:17383_1:N:0:CGATGT Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18723:17570_1:N:0:CGATGT Contig64084 484 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10541:19022_1:N:0:CGATGT Contig667548 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17328:20361_1:N:0:CGATGT Contig222624 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17016:21092_1:N:0:CGATGT Contig450017 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5877:24730_1:N:0:CGATGT Contig637260 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10825:24558_1:N:0:CGATGT Contig37039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14559:25595_1:N:0:CGATGT Contig584847 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16484:25909_1:N:0:CGATGT Contig184175 3925 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12957:27503_1:N:0:CGATGT Contig124071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19243:28077_1:N:0:CGATGT Contig110928 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9946:29550_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19296:31060_1:N:0:CGATGT Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21241:32313_1:N:0:CGATGT Contig175345 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15957:32651_1:N:0:CGATGT Contig393387 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2887:32956_1:N:0:CGATGT Contig64718 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19563:33173_1:N:0:CGATGT Contig215132 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15189:33826_1:N:0:CGATGT Contig5289 6359 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2946:34481_1:N:0:CGATGT Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4188:35930_1:N:0:CGATGT Contig568374 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20948:36139_1:N:0:CGATGT Contig126253 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17364:36403_1:N:0:CGATGT Contig481475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4122:37364_1:N:0:CGATGT Contig447612 403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7578:37297_1:N:0:CGATGT Contig561509 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14680:37594_1:N:0:CGATGT Contig488183 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18553:40664_1:N:0:CGATGT Contig11769 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16984:41284_1:N:0:CGATGT Contig244309 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20573:41836_1:N:0:CGATGT Contig576570 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18112:42316_1:N:0:CGATGT Contig159106 1269 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6315:46473_1:N:0:CGATGT Contig556672 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6496:48747_1:N:0:CGATGT Contig571869 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3096:49724_1:N:0:CGATGT Contig96647 2924 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2120:49934_1:N:0:CGATGT Contig56020 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8383:49843_1:N:0:CGATGT Contig485270 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12370:50939_1:N:0:CGATGT Contig50798 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19820:52652_1:N:0:CGATGT Contig615365 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19109:54437_1:N:0:CGATGT Contig620133 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6449:57566_1:N:0:CGATGT Contig521979 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11040:59936_1:N:0:CGATGT Contig352939 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11479:60086_1:N:0:CGATGT Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12176:62381_1:N:0:CGATGT Contig556672 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17005:64009_1:N:0:CGATGT Contig449948 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5333:66189_1:N:0:CGATGT Contig679613 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5133:66826_1:N:0:CGATGT Contig382515 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14769:66926_1:N:0:CGATGT Contig111553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10767:71233_1:N:0:CGATGT Contig66412 2498 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9635:73397_1:N:0:CGATGT Contig51473 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6830:74743_1:N:0:CGATGT Contig69735 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16139:75753_1:N:0:CGATGT Contig457548 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11200:76010_1:N:0:CGATGT Contig66788 11500 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7815:77188_1:N:0:CGATGT Contig16135 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3526:77550_1:N:0:CGATGT Contig31360 38607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6409:78444_1:N:0:CGATGT Contig26636 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17483:79034_1:N:0:CGATGT Contig362048 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5901:79471_1:N:0:CGATGT Contig76342 15825 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14530:80406_1:N:0:CGATGT Contig180011 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7038:82364_1:N:0:CGATGT Contig458609 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17495:82520_1:N:0:CGATGT Contig609703 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1400:83051_1:N:0:CGATGT Contig490291 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18312:83805_1:N:0:CGATGT Contig22993 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10931:84585_1:N:0:CGATGT Contig241970 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5121:85433_1:N:0:CGATGT Contig92320 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10589:85340_1:N:0:CGATGT Contig20863 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18269:85810_1:N:0:CGATGT Contig23411 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11298:86157_1:N:0:CGATGT Contig116662 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20543:86882_1:N:0:CGATGT Contig165074 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14839:87761_1:N:0:CGATGT Contig207539 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11278:89342_1:N:0:CGATGT Contig551582 270 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17691:90728_1:N:0:CGATGT Contig632284 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14107:90880_1:N:0:CGATGT Contig333156 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2412:92192_1:N:0:CGATGT Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2398:92911_1:N:0:CGATGT Contig639335 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14952:92985_1:N:0:CGATGT Contig63084 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1159:96343_1:N:0:CGATGT Contig3684 8963 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11414:96647_1:N:0:CGATGT Contig531876 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16740:97473_1:N:0:CGATGT Contig615419 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10421:99793_1:N:0:CGATGT Contig384085 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1869:100006_1:N:0:CGATGT Contig45395 31218 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15515:100027_1:N:0:CGATGT Contig526302 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7066:100292_1:N:0:CGATGT Contig424115 199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14388:2460_1:N:0:CGATGT Contig583874 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20107:2905_1:N:0:CGATGT Contig572941 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4096:3641_1:N:0:CGATGT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5050:4926_1:N:0:CGATGT Contig35839 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12840:7707_1:N:0:CGATGT Contig440263 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7506:8935_1:N:0:CGATGT Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12163:8780_1:N:0:CGATGT Contig362597 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20662:11193_1:N:0:CGATGT Contig687343 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2294:11484_1:N:0:CGATGT Contig85159 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6735:11693_1:N:0:CGATGT Contig489961 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11893:11921_1:N:0:CGATGT Contig127528 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10160:12686_1:N:0:CGATGT Contig130518 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6868:13085_1:N:0:CGATGT Contig16736 3287 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11230:13255_1:N:0:CGATGT Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2292:13622_1:N:0:CGATGT Contig277489 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20036:14598_1:N:0:CGATGT Contig205286 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9287:14986_1:N:0:CGATGT Contig279673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6003:16929_1:N:0:CGATGT Contig549805 253 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13449:17976_1:N:0:CGATGT Contig143225 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11245:18967_1:N:0:CGATGT Contig165074 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18399:19116_1:N:0:CGATGT Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17971:20162_1:N:0:CGATGT Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4826:21494_1:N:0:CGATGT Contig159488 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5101:21654_1:N:0:CGATGT Contig114129 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6191:22062_1:N:0:CGATGT Contig338905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10652:22484_1:N:0:CGATGT Contig168413 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14978:22965_1:N:0:CGATGT Contig33186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19799:22765_1:N:0:CGATGT Contig277964 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5626:24074_1:N:0:CGATGT Contig24643 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8937:24553_1:N:0:CGATGT Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2436:24969_1:N:0:CGATGT Contig125721 3257 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21209:26055_1:N:0:CGATGT Contig83218 7103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20667:27254_1:N:0:CGATGT Contig100960 9394 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12890:28618_1:N:0:CGATGT Contig37235 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1644:29764_1:N:0:CGATGA Contig54892 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10711:29858_1:N:0:CGATGT Contig547388 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20013:29895_1:N:0:CGATGT Contig262188 1913 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20077:29908_1:N:0:CGATGT Contig439555 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20255:29760_1:N:0:CGATGT Contig604698 118 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15943:32136_1:N:0:CGATGT Contig93308 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8504:32961_1:N:0:CGATGT Contig367342 189 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9359:34127_1:N:0:CGATGT Contig29050 13759 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4178:34863_1:N:0:CGATGT Contig445780 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19641:36051_1:N:0:CGATGT Contig373510 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7945:36896_1:N:0:CGATGT Contig31085 14933 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3336:37822_1:N:0:CGATGT Contig79146 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6616:40060_1:N:0:CGATGT Contig176314 832 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17724:40131_1:N:0:CGATGT Contig307018 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2995:40660_1:N:0:CGATGT Contig290117 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12160:42469_1:N:0:CGATGT Contig225359 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7984:42508_1:N:0:CGATGT Contig79309 2453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15641:43946_1:N:0:CGATGT Contig253398 236 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7313:45306_1:N:0:CGATGT Contig76313 19089 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9357:45587_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20928:48941_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20669:49706_1:N:0:CGATGT Contig479758 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1496:50899_1:N:0:CGATGT Contig626070 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10497:51851_1:N:0:CGATGT Contig16398 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4352:53743_1:N:0:CGATGT Contig141835 3667 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18351:54607_1:N:0:CGATGT Contig407487 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11362:55480_1:N:0:CGATGT Contig377985 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4957:55610_1:N:0:CGATGT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10337:56077_1:N:0:CGATGT Contig9580 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1172:60163_1:N:0:CGATGT Contig136298 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5787:61049_1:N:0:CGATGT Contig339390 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2582:62977_1:N:0:CGATGT Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9287:62753_1:N:0:CGATGT Contig334859 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13126:71941_1:N:0:CGATGT Contig658345 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17325:72298_1:N:0:CGATGT Contig282780 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4428:73738_1:N:0:CGATGT Contig38185 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15833:74631_1:N:0:CGATGT Contig505247 177 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20837:75564_1:N:0:CGATGT Contig555354 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21115:76153_1:N:0:CGATGT Contig122733 778 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2313:81303_1:N:0:CGATGT Contig218693 459 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21150:81918_1:N:0:CGATGT Contig575589 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19812:83235_1:N:0:CGATGT Contig39396 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4782:83368_1:N:0:CGATGT Contig447369 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3786:83703_1:N:0:CGATGT Contig487894 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3655:84689_1:N:0:CGATGT Contig371406 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15223:85439_1:N:0:CGATGT Contig50320 19245 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20530:87091_1:N:0:CGATGT Contig250907 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3776:87395_1:N:0:CGAGGT Contig524673 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7210:87378_1:N:0:CGATGT Contig512821 482 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10610:90490_1:N:0:CGATGT Contig79057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13159:94259_1:N:0:CGATGT Contig52673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11527:95198_1:N:0:CGATGT Contig674123 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16749:95126_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7072:95519_1:N:0:CGATGT Contig67821 3136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1752:96036_1:N:0:CGATGT Contig657875 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13773:96387_1:N:0:CGATGT Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15109:97954_1:N:0:CGATGT Contig366879 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17456:98473_1:N:0:CGATGT Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18576:98934_1:N:0:CGATGT Contig389111 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3464:2673_1:N:0:CGATGT Contig92686 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10500:3114_1:N:0:CGATGT Contig67821 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15561:3640_1:N:0:CGATGT Contig564770 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1815:4316_1:N:0:CGATGT Contig542642 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6619:5478_1:N:0:CGATGT Contig486659 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15039:7691_1:N:0:CGATGT Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1729:8361_1:N:0:CGATGT Contig145807 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3816:9855_1:N:0:CGATGT Contig126754 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15884:10398_1:N:0:CGATGT Contig3459 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8947:11565_1:N:0:CGATGT Contig585966 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10319:12230_1:N:0:CGATGT Contig297976 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1979:12450_1:N:0:CGATGT Contig360201 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15671:13268_1:N:0:CGATGT Contig530378 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2536:14109_1:N:0:CGATGT Contig268099 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10580:16141_1:N:0:CGATGT Contig626070 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4307:17389_1:N:0:CGATGT Contig336119 188 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11181:19761_1:N:0:CGATGT Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11738:21883_1:N:0:CGATGT Contig66163 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10246:22349_1:N:0:CGATGT Contig279673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17534:23871_1:N:0:CGATGT Contig670368 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10363:24317_1:N:0:CGATGT Contig52530 14128 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12948:24481_1:N:0:CGATGT Contig509432 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18212:24593_1:N:0:CGATGT Contig112110 4071 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3570:25185_1:N:0:CGATGT Contig143583 4038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8668:25529_1:N:0:CGATGA Contig274543 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5625:26291_1:N:0:CGATGT Contig444636 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13248:27090_1:N:0:CGATGT Contig521501 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15380:28002_1:N:0:CGATGT Contig67554 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5904:28957_1:N:0:CGATGT Contig475499 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17544:29359_1:N:0:CGATGT Contig608148 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19349:30331_1:N:0:CGATGT Contig491737 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4672:30913_1:N:0:CGATGT Contig141825 751 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5268:33191_1:N:0:CGATGT Contig47680 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16204:33124_1:N:0:CGATGT Contig109913 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2722:35175_1:N:0:CGATGT Contig105623 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1279:35439_1:N:0:CGATGT Contig59947 3805 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15147:35701_1:N:0:CGATGT Contig54452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10285:37092_1:N:0:CGATGT Contig568374 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8983:38129_1:N:0:CGATGT Contig417 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8018:38601_1:N:0:CGATGT Contig393446 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14753:39136_1:N:0:CGATGT Contig425720 162 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2589:39265_1:N:0:CGATGT Contig683689 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11145:41010_1:N:0:CGATGT Contig5974 8404 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19220:42470_1:N:0:CGATGT Contig312272 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3270:44232_1:N:0:CGATGT Contig88851 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14663:45415_1:N:0:CGATGT Contig656981 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13802:45876_1:N:0:CGATGT Contig201993 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14608:46380_1:N:0:CGATGT Contig243636 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15533:46480_1:N:0:CGATGT Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17558:49180_1:N:0:CGATGT Contig334209 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3287:51926_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20256:52388_1:N:0:CGATGT Contig403800 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7067:52908_1:N:0:CGATGT Contig481475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7139:53461_1:N:0:CGATGT Contig21071 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15319:53320_1:N:0:CGATGT Contig134742 3193 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16255:53397_1:N:0:CGATGT Contig449600 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9775:54687_1:N:0:CGATGT Contig92070 2097 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17885:54690_1:N:0:CGATGT Contig145069 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2375:55090_1:N:0:CGATGT Contig440638 213 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18509:55877_1:N:0:CGATGT Contig175238 982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12617:56340_1:N:0:CGATGT Contig102858 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10193:56914_1:N:0:CGATGT Contig64902 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2628:58356_1:N:0:CGATGT Contig274666 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12249:58543_1:N:0:CGATGT Contig370881 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1263:59303_1:N:0:CGATGT Contig695691 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8881:60152_1:N:0:CGATGT Contig181140 1031 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11568:61017_1:N:0:CGATGT Contig552736 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11075:62221_1:N:0:CGATGT Contig565198 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9365:65243_1:N:0:CGATGT Contig512497 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6443:66172_1:N:0:CGATGT Contig650985 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17937:66177_1:N:0:CGATGT Contig310256 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4411:68432_1:N:0:CGATGT Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11061:68453_1:N:0:CGATGT Contig426130 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2568:68554_1:N:0:CGAAGT Contig467791 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18450:68873_1:N:0:CGATGT Contig502281 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2094:69439_1:N:0:CGATGT Contig226203 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16551:70533_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9391:71178_1:N:0:CGATGT Contig35932 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18213:71311_1:N:0:CGATGT Contig305045 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1524:72243_1:N:0:CGATGT Contig298950 271 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19479:72019_1:N:0:CGATGT Contig542890 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6079:75238_1:N:0:CGATGT Contig678828 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17505:76045_1:N:0:CGATGT Contig643741 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20610:76626_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10270:77889_1:N:0:CGATGT Contig322856 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9440:79607_1:N:0:CGATGT Contig296274 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13744:79891_1:N:0:CGATGT Contig322890 229 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12920:81773_1:N:0:CGATGT Contig309585 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12116:82115_1:N:0:CGATGT Contig277135 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5263:82868_1:N:0:CGATGT Contig212132 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18686:83334_1:N:0:CGATGT Contig246676 164 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6729:83613_1:N:0:CGATGT Contig445780 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5374:84433_1:N:0:CGATGT Contig382515 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21145:85402_1:N:0:CGATGT Contig679613 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14729:85654_1:N:0:CGATGT Contig197017 509 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3391:86126_1:N:0:CGATGT Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15447:86663_1:N:0:CGATGT Contig661863 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18377:86514_1:N:0:CGATGT Contig622364 1180 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9164:86928_1:N:0:CGATGT Contig407379 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12052:87776_1:N:0:CGATGT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3644:88432_1:N:0:CGATGC Contig53023 9204 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4592:90743_1:N:0:CGATGT Contig255772 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12770:90915_1:N:0:CGATGT Contig111553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9766:91023_1:N:0:CGATGT Contig130389 2451 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19088:91202_1:N:0:CGATGT Contig382081 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17781:92763_1:N:0:CGATGT Contig106927 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4335:93504_1:N:0:CGATGT Contig452484 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13533:94078_1:N:0:CGATGT Contig573277 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17630:94614_1:N:0:CGATGT Contig147186 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3558:95996_1:N:0:CGATGT Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11202:97958_1:N:0:CGATGT Contig233955 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1791:98486_1:N:0:CGATGT Contig532781 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14273:98677_1:N:0:CGATGT Contig690973 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3996:99148_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2956:99628_1:N:0:CGATGT Contig146131 1132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19043:99737_1:N:0:CGATGT Contig346782 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2673:100742_1:N:0:CGACGT Contig670368 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20744:3505_1:N:0:CGATGT Contig672266 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10810:6681_1:N:0:CGATGT Contig270296 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13386:6903_1:N:0:CGATGT Contig497550 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3397:7350_1:N:0:CGATGT Contig73219 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17587:9111_1:N:0:CGATGT Contig197442 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3723:9884_1:N:0:CGATGT Contig208562 702 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15072:9909_1:N:0:CGATGT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16212:10182_1:N:0:CGATGT Contig533847 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11584:11286_1:N:0:CGATGT Contig15345 1082 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17070:13766_1:N:0:CGATGT Contig359627 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2060:14459_1:N:0:CGATGT Contig456187 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4335:14371_1:N:0:CGATGT Contig645289 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3316:16127_1:N:0:CGATGT Contig488185 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1907:17544_1:N:0:CGATGT Contig373353 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2673:17501_1:N:0:CGATGT Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3278:18178_1:N:0:CGATGT Contig696262 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12451:19632_1:N:0:CGATGT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18202:19545_1:N:0:CGATGT Contig431398 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4976:20201_1:N:0:CGATGT Contig282855 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5496:21206_1:N:0:CGATGT Contig249933 1866 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2038:21778_1:N:0:CGATGT Contig32293 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11260:23958_1:N:0:CGATGT Contig119155 26788 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11368:25287_1:N:0:CGATGT Contig51467 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2965:26295_1:N:0:CGATGT Contig254790 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14954:27244_1:N:0:CGATGT Contig126564 1716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9776:32098_1:N:0:CGATGT Contig298921 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13965:32482_1:N:0:CGATGT Contig625184 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13323:33314_1:N:0:CGATGT Contig135766 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15492:34889_1:N:0:CGATGT Contig310256 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2043:38211_1:N:0:CGATGT Contig468658 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10783:39921_1:N:0:CGATGT Contig560873 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19550:40264_1:N:0:CGATGT Contig351666 309 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8406:41408_1:N:0:CGATGT Contig345136 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15295:41735_1:N:0:CGATGT Contig89397 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13584:42924_1:N:0:CGATGT Contig136662 1038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11993:43800_1:N:0:CGATGT Contig558855 120 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4785:44365_1:N:0:CGATGT Contig158505 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3674:44644_1:N:0:CGATGT Contig5332 12401 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6118:46865_1:N:0:CGATGT Contig621061 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5219:48680_1:N:0:CGATGT Contig217677 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18743:48549_1:N:0:CGATGT Contig500563 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11036:49398_1:N:0:CGATGT Contig406952 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16658:50616_1:N:0:CGATGT Contig618226 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20844:52297_1:N:0:CGATGT Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2765:53229_1:N:0:CGATGT Contig141825 751 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19081:53615_1:N:0:CGATGT Contig213442 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19430:55072_1:N:0:CGATGT Contig149883 4021 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7559:55413_1:N:0:CGATGT Contig646732 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17846:58327_1:N:0:CGATGT Contig258175 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8215:59088_1:N:0:CGATGT Contig252639 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10088:59211_1:N:0:CGATGT Contig526833 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11063:59817_1:N:0:CGATGT Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15639:61707_1:N:0:CGATGT Contig110194 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19193:63513_1:N:0:CGATGT Contig667066 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16328:65204_1:N:0:CGATGT Contig312177 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11325:65967_1:N:0:CGATGT Contig647407 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17341:67868_1:N:0:CGATGT Contig650299 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11830:69143_1:N:0:CGATGT Contig101135 7140 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13814:70942_1:N:0:CGATGT Contig225546 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20738:72598_1:N:0:CGATGT Contig38042 3697 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20109:72953_1:N:0:CGATGT Contig509274 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4625:73767_1:N:0:CGATGT Contig559860 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16982:74053_1:N:0:CGATGT Contig211468 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12362:75561_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19307:75628_1:N:0:CGATGT Contig412774 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13947:76002_1:N:0:CGATGT Contig487566 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1709:77409_1:N:0:CGATGT Contig178537 523 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1290:78639_1:N:0:CGATGT Contig578008 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12154:81263_1:N:0:CGATGT Contig422690 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3362:81657_1:N:0:CGATGT Contig497287 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19106:82266_1:N:0:CGATGT Contig672214 570 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19844:83082_1:N:0:CGATGT Contig218578 446 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7358:84326_1:N:0:CGATGT Contig398864 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15574:84871_1:N:0:CGATGT Contig222869 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7893:87595_1:N:0:CGATGT Contig204018 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6645:91431_1:N:0:CGATGT Contig671175 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10946:91490_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1671:91573_1:N:0:CGATGT Contig170554 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15288:92260_1:N:0:CGATGT Contig129062 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16109:92404_1:N:0:CGATGT Contig261705 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19721:93292_1:N:0:CGATGT Contig168888 795 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16745:98988_1:N:0:CGATGT Contig25 92794 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20145:98770_1:N:0:CGATGT Contig629652 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11678:100724_1:N:0:CGATGT Contig223247 6771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15833:100556_1:N:0:CGATGT Contig608213 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13204:100985_1:N:0:CGAAGT Contig491386 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7404:2256_1:N:0:CGATGT Contig152050 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7835:2704_1:N:0:CGATGT Contig76964 2048 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2492:4527_1:N:0:CGATGT Contig416546 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13778:5273_1:N:0:CGATGT Contig46299 11131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11926:5981_1:N:0:CGAAGT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15664:5789_1:N:0:CGATGT Contig578992 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5663:6162_1:N:0:CGATGT Contig218474 504 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4496:6691_1:N:0:CGATGT Contig218333 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5410:6513_1:N:0:CGATGT Contig61328 7315 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20358:7094_1:N:0:CGATGT Contig529065 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18704:7896_1:N:0:CGATGT Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10089:8026_1:N:0:CGATGT Contig668602 515 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3099:8344_1:N:0:CGATGT Contig606672 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17245:9739_1:N:0:CAATGT Contig439156 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17136:10393_1:N:0:CGATGT Contig651031 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12814:12156_1:N:0:CGATGT Contig167884 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12905:12829_1:N:0:CGATGT Contig61589 13323 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11982:15409_1:N:0:CGATGT Contig195665 467 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1243:16239_1:N:0:CGATGT Contig290008 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10098:16223_1:N:0:CGATGT Contig576713 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14761:16622_1:N:0:CGATGT Contig37842 35921 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20174:16869_1:N:0:CGATGT Contig24030 11403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4753:17037_1:N:0:CGATGT Contig98831 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13817:21923_1:N:0:CGATGT Contig185522 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13492:22079_1:N:0:CGATGT Contig179813 400 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9261:22824_1:N:0:CGATGT Contig417182 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20489:26100_1:N:0:CGATGT Contig633970 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9102:28124_1:N:0:CGATGT Contig19140 10460 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6235:30436_1:N:0:CGATGT Contig51851 912 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14806:30866_1:N:0:CGATGT Contig181954 890 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6053:31625_1:N:0:CGATGT Contig383732 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9221:32480_1:N:0:CGATGT Contig516151 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8622:32700_1:N:0:CGATGT Contig94742 8680 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2472:33088_1:N:0:CGATGT Contig91624 8987 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18705:33034_1:N:0:CGATGT Contig98115 9838 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3442:33427_1:N:0:CGATGT Contig248355 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17687:34566_1:N:0:CGATGT Contig270031 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12344:35809_1:N:0:CGATGT Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19064:40574_1:N:0:CGATGT Contig481575 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6084:41371_1:N:0:CGATGT Contig497925 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15892:41355_1:N:0:CGATGT Contig428061 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15200:42478_1:N:0:CGATGT Contig459890 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10217:42538_1:N:0:CGATGT Contig287273 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7285:43566_1:N:0:CGATGT Contig203102 505 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13965:44212_1:N:0:CGATGT Contig196877 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7116:44688_1:N:0:CGATGT Contig502099 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11872:45411_1:N:0:CGATGT Contig239957 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4785:45784_1:N:0:CGATGT Contig149493 1194 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4737:46347_1:N:0:CGATGT Contig450934 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12733:48131_1:N:0:CGATGT Contig469863 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19539:49151_1:N:0:CGATGT Contig116775 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13907:51112_1:N:0:CGATGT Contig38952 1543 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5469:52053_1:N:0:CGATGT Contig489967 427 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13609:52848_1:N:0:CGATGT Contig269317 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4757:53541_1:N:0:CGATGT Contig111553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10714:53840_1:N:0:CGATGT Contig653957 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8987:54339_1:N:0:CGATGT Contig513025 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1421:55646_1:N:0:CGATGT Contig165074 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8410:55543_1:N:0:CGATGT Contig28864 27255 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9035:55643_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15779:55651_1:N:0:CGATGT Contig236672 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4431:56107_1:N:0:CGATGT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14215:56299_1:N:0:CGATGT Contig83124 2131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9369:60728_1:N:0:CGATGT Contig123371 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7977:60880_1:N:0:CGATGT Contig94564 2391 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9425:63422_1:N:0:CGATGT Contig43004 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12069:64603_1:N:0:CGATGT Contig181379 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7913:66358_1:N:0:CGATGT Contig265669 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18942:67037_1:N:0:CGATGT Contig541619 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11286:68013_1:N:0:CGATGT Contig168318 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16960:68553_1:N:0:CGATGT Contig219450 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10774:68965_1:N:0:CGATGT Contig426598 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16691:71449_1:N:0:CGATGT Contig456591 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10008:71616_1:N:0:CGATGT Contig450365 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16093:73296_1:N:0:CGATGT Contig127394 5049 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16635:73408_1:N:0:CGATGT Contig77115 3384 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4899:74540_1:N:0:CGATGT Contig533827 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4831:75622_1:N:0:CGATGT Contig238604 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4352:75919_1:N:0:CGATGT Contig335668 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11830:76196_1:N:0:CGATGT Contig134638 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6682:76422_1:N:0:CGATGT Contig392759 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3534:76930_1:N:0:CGATGT Contig488965 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18006:80331_1:N:0:CGATGT Contig57442 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7443:84794_1:N:0:CGATGT Contig189159 7854 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12760:85206_1:N:0:CGATGT Contig187690 750 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16457:86624_1:N:0:CGATGT Contig137089 1039 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8844:87866_1:N:0:CGATGT Contig662118 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4213:88035_1:N:0:CGATGT Contig74916 7867 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15896:89302_1:N:0:CGATGT Contig129205 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9010:89795_1:N:0:CGATGT Contig468225 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1837:90268_1:N:0:CGATGT Contig630807 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18929:92494_1:N:0:CGATGT Contig85861 3248 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7385:96230_1:N:0:CGATGT Contig485540 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4043:96484_1:N:0:CGATGT Contig633476 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7286:97609_1:N:0:CGATGT Contig51452 7800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20921:98056_1:N:0:CGATGT Contig423149 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4345:99292_1:N:0:CGATGT Contig389111 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11235:99488_1:N:0:CGATGT Contig695952 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5916:2863_1:N:0:CGATGT Contig537814 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5045:3990_1:N:0:CGATGT Contig585770 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14509:3813_1:N:0:CGATGT Contig502030 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3325:4928_1:N:0:CGATGT Contig261084 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19399:5508_1:N:0:CGATGT Contig668788 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4620:5948_1:N:0:CGATGT Contig596078 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15449:7430_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7599:8855_1:N:0:CGATGT Contig553880 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10111:9803_1:N:0:CGATGT Contig592335 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19998:9769_1:N:0:CGATGT Contig51545 1945 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13649:10634_1:N:0:CGATGT Contig479049 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8302:12210_1:N:0:CGATGT Contig683091 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20777:13573_1:N:0:CGATGT Contig482678 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5920:15473_1:N:0:CGATGT Contig102113 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3002:16749_1:N:0:CGATGT Contig308788 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1457:16787_1:N:0:CGATGT Contig167884 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20909:18208_1:N:0:CGATGT Contig43910 1277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16935:18406_1:N:0:CGATGT Contig530378 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4444:18520_1:N:0:CGATGT Contig70586 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20806:18751_1:N:0:CGATGT Contig696209 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16755:19071_1:N:0:CGATGT Contig174296 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13310:20628_1:N:0:CGATGT Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19287:21811_1:N:0:CGATGT Contig568374 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14760:22877_1:N:0:CGATGT Contig85962 6906 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10750:23373_1:N:0:CGATGT Contig82400 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10499:23823_1:N:0:CGATGT Contig236604 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15301:24734_1:N:0:CGATGT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18038:24826_1:N:0:CGATGT Contig177606 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14226:27755_1:N:0:CGATGT Contig635415 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1986:30503_1:N:0:CGATGT Contig33104 9808 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6707:32110_1:N:0:CGATGT Contig653957 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16683:32110_1:N:0:CGATGT Contig411564 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12086:32461_1:N:0:CGATGT Contig435226 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9296:36559_1:N:0:CGATGT Contig380239 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14676:37325_1:N:0:CGATGT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17902:37489_1:N:0:CGATGT Contig541926 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1603:37968_1:N:0:CGATGT Contig360581 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11918:38844_1:N:0:CGATGT Contig54452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14705:39975_1:N:0:CGATGT Contig159125 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2111:40058_1:N:0:CGATGT Contig618630 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4941:40172_1:N:0:CGATGT Contig126773 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15313:40400_1:N:0:CGATGT Contig483238 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15179:41143_1:N:0:CGATGT Contig38547 1921 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2439:41679_1:N:0:CGATGT Contig8735 5909 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4921:41784_1:N:0:CGATGT Contig520165 2 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 784862 (78.49%) aligned 0 times 109921 (10.99%) aligned exactly 1 time 105217 (10.52%) aligned >1 times 21.51% overall alignment rate Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3982:43472_1:N:0:CGATGT Contig158704 1089 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 785807 (78.58%) aligned 0 times 109338 (10.93%) aligned exactly 1 time 104855 (10.49%) aligned >1 times 21.42% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 365427 (36.54%) aligned 0 times 217630 (21.76%) aligned exactly 1 time 416943 (41.69%) aligned >1 times 63.46% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 365267 (36.53%) aligned 0 times 218392 (21.84%) aligned exactly 1 time 416341 (41.63%) aligned >1 times 63.47% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 2_CGATGT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 2_CGATGT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 399343 Mapping efficiency: 39.9% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2256185 Total methylated C's in CpG context: 86136 Total methylated C's in CHG context: 9408 Total methylated C's in CHH context: 129242 Total methylated C's in Unknown context: 32 Total unmethylated C's in CpG context: 220939 Total unmethylated C's in CHG context: 405831 Total unmethylated C's in CHH context: 1404629 Total unmethylated C's in Unknown context: 408 C methylated in CpG context: 28.1% C methylated in CHG context: 2.3% C methylated in CHH context: 8.4% C methylated in Unknown context (CN or CHN): 7.3% Bismark completed in 0d 0h 44m 14s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/3_TTAGGC_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 3_TTAGGC_L001_R1_001_trimmed.fq.gz to 3_TTAGGC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 3_TTAGGC_L001_R1_001_trimmed.fq.gz to 3_TTAGGC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 3_TTAGGC_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 3_TTAGGC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 3_TTAGGC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 3_TTAGGC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1120:2166_1:N:0:TTAGGC 4 * 0 0 * * 0 0 TTTTGTTTTTTATATGTTAAATTTTTAAATG >> Writing bisulfite mapping results to 3_TTAGGC_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/3_TTAGGC_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5081:5741_1:N:0:TTAGGC Contig42137 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4111:8238_1:N:0:TTAGGC Contig402464 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17996:8041_1:N:0:TTAGGC Contig199452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13835:8556_1:N:0:TTAGGC Contig96488 1435 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8197:10152_1:N:0:TTAGGC Contig235100 511 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9314:10561_1:N:0:TTAGGC Contig456426 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21261:12190_1:N:0:TTAGGC Contig574936 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17053:15929_1:N:0:TTAGGC Contig132053 3541 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19618:16814_1:N:0:TTAGGC Contig290221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4146:20954_1:N:0:TTAGGC Contig97879 5453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4986:22540_1:N:0:TTAGGC Contig636094 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17441:24232_1:N:0:TTAGGC Contig443643 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3213:25142_1:N:0:TTAGGC Contig115521 2733 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4136:25527_1:N:0:TTAGGC Contig358786 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20772:30836_1:N:0:TTAGGC Contig598912 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18961:34608_1:N:0:TTAGGC Contig181492 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1537:35521_1:N:0:TTAGGC Contig649415 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8342:36155_1:N:0:TTAGGC Contig462266 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1243:41191_1:N:0:TTAGGC Contig421917 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7521:41207_1:N:0:TTAGGC Contig125524 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10695:43566_1:N:0:TTAGGC Contig254288 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4962:45227_1:N:0:TTAGGC Contig644370 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20300:45607_1:N:0:TTAGGC Contig194667 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17638:49552_1:N:0:TTAGGC Contig4083 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1744:50107_1:N:0:TTAGGC Contig3196 17803 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16252:50313_1:N:0:TTAGGC Contig66183 854 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16785:51537_1:N:0:TTAGGC Contig222718 630 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3570:52963_1:N:0:TTAGGC Contig347271 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8832:52894_1:N:0:TTAGGC Contig365299 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14830:54124_1:N:0:TTAGGC Contig26380 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6153:54331_1:N:0:TTAGGC Contig76256 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12627:55510_1:N:0:TTATGC Contig94293 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15085:56355_1:N:0:TTAGGC Contig514909 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5917:57122_1:N:0:TTAGGC Contig397146 363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10288:58030_1:N:0:TTAGGC Contig117977 180 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20315:59168_1:N:0:TTAGGC Contig300694 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15555:59368_1:N:0:TTAGGC Contig44673 12648 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8009:60048_1:N:0:TTAGGC Contig641383 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14259:70473_1:N:0:TTAGGC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14730:70357_1:N:0:TTAGGC Contig290221 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9563:70552_1:N:0:TTAGGC Contig79305 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9843:71111_1:N:0:TTAGGC Contig468652 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14067:71580_1:N:0:TTAGGC Contig596016 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5744:75297_1:N:0:TTAGGC Contig13974 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8262:75494_1:N:0:TTAGGC Contig695575 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16485:75383_1:N:0:TTAGGC Contig438635 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15415:76678_1:N:0:TTAGGC Contig443404 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14404:77547_1:N:0:TTAGGC Contig74607 3434 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19937:79777_1:N:0:TTAGGC Contig57928 21869 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2924:81225_1:N:0:TTAGGC Contig117 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2487:81994_1:N:0:TTAGGC Contig246517 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2955:83812_1:N:0:TTAGGC Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2249:86665_1:N:0:TTAGGC Contig652532 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14440:86832_1:N:0:TTAGGC Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15883:86839_1:N:0:TTAGGC Contig31794 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6977:87284_1:N:0:TTAGGC Contig178270 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11595:87450_1:N:0:TTAGGC Contig449110 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11314:89185_1:N:0:TTAGGC Contig330951 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7697:89833_1:N:0:TTAGGC Contig197804 447 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3591:92075_1:N:0:TTAGGC Contig113133 1414 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19627:92462_1:N:0:TTAGGC Contig13945 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10125:93167_1:N:0:TTAGGC Contig207546 808 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16411:93166_1:N:0:TTAGGC Contig52933 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13728:95368_1:N:0:TTAGGC Contig367397 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5297:97537_1:N:0:TTAGGC Contig160526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2057:97896_1:N:0:TTAGGC Contig36127 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20078:100336_1:N:0:TTAGGC Contig506165 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5614:4526_1:N:0:TTAGGC Contig540388 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18198:6026_1:N:0:TTAGGC Contig281184 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14839:7492_1:N:0:TTAGGC Contig452211 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3716:8902_1:N:0:TTAGGC Contig582711 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10444:8839_1:N:0:TTAGGC Contig94524 8135 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2073:11160_1:N:0:TTAGGC Contig507662 117 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4777:12696_1:N:0:TTAGGC Contig536181 115 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7473:13166_1:N:0:TTAGGC Contig52820 12647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21241:13385_1:N:0:TTAGGC Contig141320 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18857:14154_1:N:0:TTAGGC Contig506591 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17460:16689_1:N:0:TTAGGC Contig638766 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17011:16895_1:N:0:TTAGGC Contig67821 3136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13854:17062_1:N:0:TTAGGC Contig137598 1841 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13796:17070_1:N:0:TTAGGC Contig653221 320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20842:19136_1:N:0:TTAGGC Contig36851 1099 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5757:19626_1:N:0:TTAGGC Contig509274 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15014:20254_1:N:0:TTAGGC Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21259:21296_1:N:0:TTAGGC Contig624250 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16865:23851_1:N:0:TTAGGC Contig623140 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14527:25831_1:N:0:TTAGGC Contig570472 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7663:26447_1:N:0:TTAGGC Contig528791 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8876:26265_1:N:0:TTAGGC Contig406952 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9093:27142_1:N:0:TTAGGC Contig12930 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16842:28320_1:N:0:TTAGGC Contig12338 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18971:29460_1:N:0:TTAGGC Contig60519 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14590:30297_1:N:0:TTAGGC Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14762:30912_1:N:0:TTAGGC Contig393691 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11236:32756_1:N:0:TTAGGC Contig258679 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1722:33694_1:N:0:TTAGGC Contig378594 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6382:33526_1:N:0:TTAGGC Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13706:33805_1:N:0:TTAGGC Contig125724 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1916:34010_1:N:0:TTAGGC Contig175238 982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15002:35446_1:N:0:TTAGGC Contig334562 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12519:35968_1:N:0:TTAGGC Contig112922 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3157:36936_1:N:0:TTAGGC Contig397195 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5314:38664_1:N:0:TTAGGC Contig94064 954 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16873:39795_1:N:0:TTAGGC Contig50844 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1508:41561_1:N:0:TTAGGC Contig637690 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1937:42625_1:N:0:TTAGGC Contig420490 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15263:43108_1:N:0:TTAGGC Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15913:43877_1:N:0:TTAGGC Contig508137 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1172:51506_1:N:0:TTAGGC Contig686969 1578 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15884:51837_1:N:0:TTAGGC Contig53023 9203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8447:52162_1:N:0:TTAGGC Contig504077 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2663:52468_1:N:0:TTAGGC Contig178534 1616 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11386:52512_1:N:0:TTAGGC Contig248206 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6469:52984_1:N:0:TTAGGC Contig67849 9410 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11310:53150_1:N:0:TTAGGC Contig232924 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8728:54060_1:N:0:TTAGGC Contig194927 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18093:56033_1:N:0:TTAGGC Contig1284 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4702:57556_1:N:0:TTAGGC Contig696381 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15230:57538_1:N:0:TTAGGC Contig125459 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2129:57808_1:N:0:TTAGGC Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16497:59102_1:N:0:TTAGGC Contig256892 390 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19407:59118_1:N:0:TTAGGC Contig48449 5296 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15793:63310_1:N:0:TTAGGC Contig343041 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14491:63605_1:N:0:TTAGGC Contig542664 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18313:64469_1:N:0:TTAGGC Contig310480 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18513:65345_1:N:0:TTAGGC Contig76080 2248 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13426:66247_1:N:0:TTAGGC Contig645560 111 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8887:66408_1:N:0:TTAGGC Contig396095 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19678:67047_1:N:0:TTAGGC Contig609328 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13220:68723_1:N:0:TTAGGC Contig301723 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19058:69864_1:N:0:TTAGGC Contig439697 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12296:70061_1:N:0:TTAGGC Contig102480 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17741:70189_1:N:0:TTAGGC Contig187556 736 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1484:73012_1:N:0:TTAGGC Contig533378 215 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9994:73097_1:N:0:TTAGGC Contig24100 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10296:73317_1:N:0:TTAGGC Contig143855 2495 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2699:74349_1:N:0:TTAGGC Contig140547 3880 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7784:75097_1:N:0:TTAGGC Contig4813 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2134:75280_1:N:0:TTAGGC Contig671779 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20642:75679_1:N:0:TTAGGC Contig123279 704 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1211:76462_1:N:0:TTAGGC Contig15307 2314 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3263:78202_1:N:0:TTAGGC Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2558:78556_1:N:0:TTAGGC Contig405449 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1235:80407_1:N:0:TTAGGC Contig137493 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15845:81805_1:N:0:TTAGGC Contig527515 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7485:82764_1:N:0:TTAGGC Contig191294 706 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10743:88301_1:N:0:TTAGGC Contig113856 1122 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8409:91131_1:N:0:TTAGGC Contig202387 464 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15267:93284_1:N:0:TTAGGC Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12456:97303_1:N:0:TTAGGC Contig576534 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20441:98788_1:N:0:TTAGGC Contig215795 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15385:99610_1:N:0:TTAGGC Contig248441 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1565:99873_1:N:0:TTAGGC Contig535967 266 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12149:100203_1:N:0:TTAGGC Contig502728 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10572:4994_1:N:0:TTAGGC Contig685384 110 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12787:5542_1:N:0:TTAGGC Contig362824 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3017:6549_1:N:0:TTAGGC Contig134939 3112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4308:8028_1:N:0:TTAGGC Contig12009 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12745:8826_1:N:0:TTAGGC Contig657013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20620:9405_1:N:0:TTAGGC Contig452682 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8878:12290_1:N:0:TTAGGC Contig253003 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19921:12942_1:N:0:TTAGGC Contig219580 567 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16956:13975_1:N:0:TTAGGC Contig402077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10937:14777_1:N:0:TTAGGC Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17748:15556_1:N:0:TTAGGC Contig52742 9895 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11485:18247_1:N:0:TTAGGC Contig504043 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18715:19173_1:N:0:TTAGGC Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19638:19207_1:N:0:TTAGGC Contig86218 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19428:22286_1:N:0:TTAGGC Contig181365 922 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12886:23288_1:N:0:TTAGGC Contig304761 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15410:23893_1:N:0:TTAGGC Contig30756 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12946:25274_1:N:0:TTAGGC Contig12865 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6626:26048_1:N:0:TTAGGC Contig440625 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17838:26922_1:N:0:TTAGGC Contig395361 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16152:27652_1:N:0:TTAGGC Contig32779 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18078:29596_1:N:0:TTAGGC Contig432804 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6172:29833_1:N:0:TTAGGC Contig88172 2575 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1428:30756_1:N:0:TTAGGC Contig544373 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16044:31738_1:N:0:TTAGGC Contig492823 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8056:34494_1:N:0:TTAGGC Contig206213 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18605:34473_1:N:0:TTAGGC Contig18356 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4324:34717_1:N:0:TTAGGC Contig234615 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16667:34566_1:N:0:TTAGGC Contig348950 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2700:35595_1:N:0:TTAGGC Contig627364 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2693:35613_1:N:0:TTAGGC Contig627364 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8360:36796_1:N:0:TTAGGC Contig55673 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6897:41690_1:N:0:TTAGGC Contig234905 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16788:41969_1:N:0:TTAGGC Contig466298 234 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5958:42643_1:N:0:TTAGGC Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7696:45350_1:N:0:TTAGGC Contig583785 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12386:45379_1:N:0:TTAGGC Contig62938 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8437:46054_1:N:0:TTAGGC Contig639777 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16611:47466_1:N:0:TTAGGC Contig40273 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6439:48063_1:N:0:TTAGGC Contig526039 129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21156:49783_1:N:0:TTAGGC Contig635923 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8304:51064_1:N:0:TTAGGC Contig360581 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18841:52172_1:N:0:TTAGGC Contig104841 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7696:54111_1:N:0:TTAGGC Contig139593 1691 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19969:54068_1:N:0:TTAGGC Contig157520 590 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14355:55339_1:N:0:TTAGGC Contig631106 326 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3052:56336_1:N:0:TTAGGC Contig30760 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8293:57157_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2190:58427_1:N:0:TTAGGC Contig41108 1372 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8533:59997_1:N:0:TTAGGC Contig181140 1031 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17257:60235_1:N:0:TTAGGC Contig309032 1104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1773:62621_1:N:0:TTAGGC Contig126510 1451 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17560:62890_1:N:0:TTAGGC Contig299698 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4438:66080_1:N:0:TTAGGC Contig98491 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5296:66178_1:N:0:TTAGGC Contig315 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10546:67867_1:N:0:TTAGGC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1880:68826_1:N:0:TTAGGC Contig8057 8186 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18258:69416_1:N:0:TTAGGC Contig438716 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6115:70177_1:N:0:TTAGGC Contig52112 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19713:70189_1:N:0:TTAGGC Contig424848 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20690:70489_1:N:0:TTAGGC Contig312699 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14337:71707_1:N:0:TTAGGC Contig681062 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7457:73389_1:N:0:TTAGGC Contig635923 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1274:74503_1:N:0:TTAGGC Contig593612 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14257:75764_1:N:0:TTAGGC Contig274870 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3112:78042_1:N:0:TTAGGC Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2109:78699_1:N:0:TTAGGC Contig119084 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18054:78627_1:N:0:TTAGGC Contig13493 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15480:80806_1:N:0:TTAGGC Contig60846 5639 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4246:81427_1:N:0:TTAGGC Contig509199 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16079:81267_1:N:0:TTAGGC Contig334342 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21145:82379_1:N:0:TTAGGC Contig692813 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5849:83240_1:N:0:TTAGGC Contig582114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3451:84068_1:N:0:TTAGGC Contig320955 144 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11609:86142_1:N:0:TTAGGC Contig288959 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3691:89953_1:N:0:TTAGGC Contig349733 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18694:93075_1:N:0:TTAGGC Contig255068 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2826:96051_1:N:0:TTAGGC Contig129530 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12334:96647_1:N:0:TTAGGC Contig395140 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6997:97272_1:N:0:TTAGGC Contig424115 199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2668:97789_1:N:0:TTAGGC Contig63431 18762 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19506:99186_1:N:0:TTAGGC Contig149883 4021 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12970:100534_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5296:3476_1:N:0:TTAGGC Contig427146 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2224:3534_1:N:0:TTAGGC Contig5974 8404 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19871:6357_1:N:0:TTAGGC Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14286:6693_1:N:0:TTAGGC Contig73546 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9746:7253_1:N:0:TTAGGC Contig438716 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19724:9532_1:N:0:TTAGGC Contig374237 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10641:10386_1:N:0:TTAGGC Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17040:10462_1:N:0:TTAGGC Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17603:10547_1:N:0:TTAGGC Contig79341 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11864:12669_1:N:0:TTAGGC Contig560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19970:17120_1:N:0:TTAGGC Contig171330 809 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16405:17417_1:N:0:TTAGGC Contig491795 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2260:18521_1:N:0:TTAGGC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12256:20315_1:N:0:TTAGGC Contig85944 7534 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8637:21449_1:N:0:TTAGGC Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13812:23488_1:N:0:TTAGGC Contig115245 2017 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3344:27093_1:N:0:TTAGGC Contig584021 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6457:29428_1:N:0:TTAGGC Contig18716 78249 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20779:29326_1:N:0:TTAGGC Contig302895 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13456:29528_1:N:0:TTAGGC Contig604950 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21063:29855_1:N:0:TTAGGC Contig337113 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20992:30965_1:N:0:TTAGGC Contig422215 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14683:31947_1:N:0:TTAGGC Contig356621 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4082:34557_1:N:0:TTAGGC Contig459495 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16864:35603_1:N:0:TTAGGC Contig481862 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3593:37530_1:N:0:TTAGGC Contig162809 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18701:38899_1:N:0:TTAGGC Contig481475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6451:41243_1:N:0:TTAGGC Contig436741 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9826:42861_1:N:0:TTAGGC Contig13974 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13888:42965_1:N:0:TTAGGC Contig54137 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10955:44028_1:N:0:TTAGGC Contig550634 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17712:46708_1:N:0:TTAGGC Contig601866 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18494:49621_1:N:0:TTAGGC Contig481475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16461:50566_1:N:0:TTAGGC Contig518022 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3102:51351_1:N:0:TTAGGC Contig299709 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19231:51695_1:N:0:TTAGGC Contig38356 140 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13863:52595_1:N:0:TTAGGC Contig616588 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17663:53503_1:N:0:TTAGGC Contig4012 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20027:55551_1:N:0:TTAGGC Contig467150 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13204:57003_1:N:0:TTAGGC Contig461438 143 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3845:58293_1:N:0:TTAGGC Contig421939 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13761:58722_1:N:0:TTAGGC Contig240617 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12262:59557_1:N:0:TTAGGC Contig498219 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16044:59649_1:N:0:TTAGGC Contig265638 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17796:59799_1:N:0:TTAGGC Contig48205 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2325:62164_1:N:0:TTAGGC Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20553:63953_1:N:0:TTAGGC Contig71779 14343 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4561:65489_1:N:0:TTAGGC Contig582114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15352:66706_1:N:0:TTAGGC Contig41565 1934 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2110:67209_1:N:0:TTAGGC Contig81899 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4021:67062_1:N:0:TTAGGC Contig631140 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4836:68689_1:N:0:TTAGGC Contig55038 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15543:69285_1:N:0:TTAGGC Contig81093 1327 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19397:70279_1:N:0:TTAGGC Contig642394 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5207:72845_1:N:0:TTAGGC Contig84290 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19353:73527_1:N:0:TTAGGC Contig61967 1879 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1731:74355_1:N:0:TTAGGC Contig553515 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12499:75118_1:N:0:TTAGGC Contig679613 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12760:76002_1:N:0:TTAGGC Contig414877 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16919:78226_1:N:0:TTAGGC Contig37976 3601 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3443:79255_1:N:0:TTAGGC Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7984:79652_1:N:0:TTAGGC Contig385088 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8004:79670_1:N:0:TTAGGC Contig385088 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10152:79609_1:N:0:TTAGGC Contig181713 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21194:79601_1:N:0:TTAGGC Contig19038 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15766:79959_1:N:0:TTAGGC Contig551859 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18374:80971_1:N:0:TTAGGC Contig86128 6054 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18591:81210_1:N:0:TTAGGC Contig313509 169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1906:82240_1:N:0:TTAGGC Contig3115 10399 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15222:83394_1:N:0:TTAGGC Contig344292 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10459:84683_1:N:0:TTAGGC Contig201881 2228 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18166:84629_1:N:0:TTAGGC Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13829:84861_1:N:0:TTAGGC Contig481847 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17142:85098_1:N:0:TTAGGC Contig287632 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3599:85522_1:N:0:TTAGGC Contig77627 3459 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6592:86966_1:N:0:TTAGGC Contig601288 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9915:86924_1:N:0:TTAGGC Contig209389 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2116:88465_1:N:0:TTAGGC Contig159793 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12104:88658_1:N:0:TTAGGC Contig120444 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15195:89122_1:N:0:TTAGGC Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4931:89283_1:N:0:TTAGGC Contig164550 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19808:89298_1:N:0:TTAGGC Contig602712 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13603:90130_1:N:0:TTAGGC Contig558405 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9085:91379_1:N:0:TTAGGC Contig173269 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16350:91913_1:N:0:TTAGGC Contig40436 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1345:92844_1:N:0:TTAGGC Contig463946 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18962:94405_1:N:0:TTAGGC Contig282460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3239:98039_1:N:0:TTAGGC Contig425455 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8732:98016_1:N:0:TTAGGC Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19698:3118_1:N:0:TTAGGC Contig576478 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19698:5884_1:N:0:TTAGGC Contig604213 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4919:7622_1:N:0:TTAGGC Contig506473 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10260:8283_1:N:0:TTAGGC Contig287273 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19656:8418_1:N:0:TTAGGC Contig36605 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19353:8777_1:N:0:TTAGGC Contig494493 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2777:10526_1:N:0:TTAGGC Contig159515 959 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17387:12506_1:N:0:TTAGGC Contig627288 239 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17632:14284_1:N:0:TTAGGC Contig200043 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3658:14709_1:N:0:TTAGGC Contig71779 14343 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9257:14562_1:N:0:TTAGGC Contig400035 4363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14382:17175_1:N:0:TTAGGC Contig21483 8466 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11289:17691_1:N:0:TTAGGC Contig110856 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13222:17569_1:N:0:TTAGGC Contig418362 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13116:17830_1:N:0:TTAGGC Contig657301 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3330:18668_1:N:0:TTAGGC Contig364634 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6338:18803_1:N:0:TTAGGC Contig561725 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15956:19284_1:N:0:TTAGGC Contig617279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3106:19924_1:N:0:TTAGGC Contig46276 5981 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5519:21377_1:N:0:TTAGGC Contig98714 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9857:21862_1:N:0:TTAGGC Contig414822 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2251:23240_1:N:0:TTAGGC Contig663506 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11708:23486_1:N:0:TTAGGC Contig434043 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10980:25430_1:N:0:TTAGGC Contig176386 464 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8086:27598_1:N:0:TTAGGC Contig11695 296 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15430:28905_1:N:0:TTAGGC Contig86131 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2441:31924_1:N:0:TTAGGC Contig312846 186 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10510:33527_1:N:0:TTAGGC Contig124718 1521 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14458:33983_1:N:0:TTAGGC Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13132:34341_1:N:0:TTAGGC Contig493970 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1366:35421_1:N:0:TTAGGC Contig536074 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2003:35447_1:N:0:TTAGGC Contig502478 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20388:35375_1:N:0:TTAGGC Contig689225 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7912:36606_1:N:0:TTAGGC Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15065:37793_1:N:0:TTAGGC Contig471809 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16464:38269_1:N:0:TTAGGC Contig140622 827 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6457:41319_1:N:0:TTAGGC Contig476339 501 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11913:41489_1:N:0:TTAGGC Contig406834 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17334:41938_1:N:0:TTAGGC Contig472559 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16947:42039_1:N:0:TTAGGC Contig448454 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10173:42563_1:N:0:TTAGGC Contig265958 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11890:42617_1:N:0:TTAGGC Contig83500 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5554:46939_1:N:0:TTAGGC Contig602526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12303:46925_1:N:0:TTAGGC Contig29630 3993 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2352:47906_1:N:0:TTAGGC Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16898:49767_1:N:0:TTAGGC Contig224877 121 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4444:51275_1:N:0:TTAGGC Contig645616 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6599:52401_1:N:0:TTAGGC Contig132467 794 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15226:52631_1:N:0:TTAGGC Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8436:56520_1:N:0:TTAGGC Contig454724 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18689:58302_1:N:0:TTAGGC Contig81716 5541 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12576:58684_1:N:0:TTAGGC Contig427991 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15631:58912_1:N:0:TTAGGC Contig222427 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14133:59275_1:N:0:TTAGGC Contig661481 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13961:60255_1:N:0:TTAGGC Contig490162 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8248:61421_1:N:0:TTAGGC Contig57824 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20296:61257_1:N:0:TTAGGC Contig513923 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19536:62171_1:N:0:TTAGGC Contig116644 8056 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1773:63795_1:N:0:TTAGGC Contig14063 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7106:64561_1:N:0:TTAGGC Contig607903 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16998:64800_1:N:0:TTAGGC Contig209986 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2781:65433_1:N:0:TTAGGC Contig676666 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12236:65720_1:N:0:TTAGGC Contig669075 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17209:65560_1:N:0:TTAGGC Contig16579 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7108:66174_1:N:0:TTAGGC Contig303561 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12277:67897_1:N:0:TTAGGC Contig612339 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9950:70555_1:N:0:TTAGGC Contig113399 883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3492:73663_1:N:0:TTAGGC Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12117:73724_1:N:0:TTAGGC Contig300726 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12534:76018_1:N:0:TTAGGC Contig676959 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4279:77023_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7139:78354_1:N:0:TTAGGC Contig232351 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12975:78667_1:N:0:TTAGGC Contig196177 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20407:78604_1:N:0:TTAGGC Contig597406 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2590:79398_1:N:0:TTAGGC Contig186329 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16934:79686_1:N:0:TTAGGC Contig132467 794 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12571:79948_1:N:0:TTAGGC Contig482273 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15077:80259_1:N:0:TTAGGC Contig215132 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16027:80267_1:N:0:TTAGGC Contig62730 10859 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8735:82764_1:N:0:TTAGGC Contig53573 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15604:83912_1:N:0:TTAGGC Contig525565 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18356:85129_1:N:0:TTAGGC Contig482295 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18087:86019_1:N:0:TTAGGC Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2329:87598_1:N:0:TTAGGC Contig399609 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2693:92859_1:N:0:TTAGGC Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4092:92817_1:N:0:TTAGGC Contig347934 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3111:93485_1:N:0:TTAGGC Contig505475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17132:93705_1:N:0:TTAGGC Contig46442 4147 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16117:93928_1:N:0:TTAGGC Contig278847 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1848:94401_1:N:0:TTAGGC Contig29266 8007 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8825:96571_1:N:0:TTAGGC Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6690:96802_1:N:0:TTAGGC Contig338229 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12315:2181_1:N:0:TTAGGC Contig510483 172 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4023:3403_1:N:0:TTAGGC Contig180914 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20746:3353_1:N:0:TTAGGC Contig298872 244 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4673:5054_1:N:0:TTAGGC Contig190851 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15845:6444_1:N:0:TTAGGC Contig267114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17056:6778_1:N:0:TTAGGC Contig414121 137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4612:7893_1:N:0:TTAGGC Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9856:9131_1:N:0:TTAGGC Contig421797 209 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10814:10684_1:N:0:TTAGGC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8735:11261_1:N:0:TTAGGC Contig628196 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14020:13086_1:N:0:TTAGGC Contig51364 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9644:13555_1:N:0:TTAGGC Contig387236 475 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9382:13947_1:N:0:TTAGGC Contig108449 1169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12254:15299_1:N:0:TTAGGC Contig565143 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15532:15737_1:N:0:TTAGGC Contig114702 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19389:15530_1:N:0:TTAGGC Contig74124 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10935:16594_1:N:0:TTAGGC Contig270296 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5630:17039_1:N:0:TTAGGC Contig439473 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18610:17629_1:N:0:TTAGGC Contig613521 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13100:19021_1:N:0:TTAGGC Contig201881 2228 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4816:19982_1:N:0:TTAGGC Contig291855 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11397:19838_1:N:0:TTAGGC Contig69704 8771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16733:21630_1:N:0:TTAGGC Contig142950 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11277:22472_1:N:0:TTAGGC Contig2853 8527 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5996:23559_1:N:0:TTAGGC Contig129430 4992 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21120:25258_1:N:0:TTAGGC Contig111553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17885:26935_1:N:0:TTAGGC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18082:29069_1:N:0:TTAGGC Contig233413 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15851:29393_1:N:0:TTAGGC Contig179374 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18236:31137_1:N:0:TTAGGC Contig38775 1897 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18678:31229_1:N:0:TTAGGC Contig22143 11814 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5149:31697_1:N:0:TTAGGC Contig419606 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1964:32816_1:N:0:TTAGGC Contig355919 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11960:33156_1:N:0:TTAGGC Contig129402 1531 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18844:33150_1:N:0:TTAGGC Contig135488 2214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18479:34421_1:N:0:TTAGGC Contig683417 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9982:36324_1:N:0:TTAGGC Contig140879 639 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18194:38106_1:N:0:TTAGGC Contig531515 203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4890:39484_1:N:0:TTAGGC Contig338686 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9001:40479_1:N:0:TTAGGC Contig135527 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12293:40330_1:N:0:TTAGGC Contig678349 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4996:41621_1:N:0:TTAGGC Contig452877 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4649:41770_1:N:0:TTAGGC Contig393866 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15760:41888_1:N:0:TTAGGC Contig477449 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11265:42736_1:N:0:TTAGGC Contig518500 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18137:43278_1:N:0:TTAGGC Contig333158 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2954:43662_1:N:0:TTAGGC Contig362985 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20886:44074_1:N:0:TTAGGC Contig613594 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2772:44488_1:N:0:TTAGGC Contig135488 2215 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17665:44492_1:N:0:TTAGGC Contig648802 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2345:45854_1:N:0:TTAGGC Contig1548 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9584:46292_1:N:0:TTAGGC Contig402077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9908:47334_1:N:0:TTAGGC Contig151200 1210 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14691:47274_1:N:0:TTAGGC Contig85159 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1627:47523_1:N:0:TTAGGC Contig116639 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3964:48140_1:N:0:TTAGGC Contig15160 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18047:50460_1:N:0:TTAGGC Contig396992 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19412:52640_1:N:0:TTAGGC Contig14864 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16544:52846_1:N:0:TTAGGC Contig113467 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6134:53902_1:N:0:TTAGGC Contig9424 2288 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10673:53827_1:N:0:TTAGGC Contig506303 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18913:54737_1:N:0:TTAGGC Contig118590 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12768:56161_1:N:0:TTAGGC Contig231625 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18674:56979_1:N:0:TTAGGC Contig147146 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15051:57391_1:N:0:TTAGGC Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2359:57680_1:N:0:TTAGGC Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13209:58465_1:N:0:TTAGGC Contig247044 119 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8160:58945_1:N:0:TTAGGC Contig521557 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16639:59903_1:N:0:TTAGGC Contig9323 1624 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1659:61381_1:N:0:TTAGGC Contig161423 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6374:63047_1:N:0:TTAGGC Contig642394 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17949:63662_1:N:0:TTAGGC Contig650344 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18044:64622_1:N:0:TTAGGC Contig86197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6401:66087_1:N:0:TTAGGC Contig128061 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9679:66269_1:N:0:TTAGGC Contig445714 708 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12645:66920_1:N:0:TTAGGC Contig58675 4540 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15337:66977_1:N:0:TTAGGC Contig121994 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12878:67219_1:N:0:TTAGGC Contig257227 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3581:68275_1:N:0:TTAGGC Contig254888 107 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3436:69519_1:N:0:TTAGGC Contig290044 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8305:70332_1:N:0:TTAGGC Contig9112 2445 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4188:72038_1:N:0:TAAGGC Contig194977 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13199:72397_1:N:0:TTAGGC Contig273362 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8194:75270_1:N:0:TTAGGC Contig442470 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10726:76480_1:N:0:TTAGGC Contig448533 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12671:78124_1:N:0:TTAGGC Contig594266 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7062:78413_1:N:0:TTAGGC Contig562505 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8947:78973_1:N:0:TTAGGC Contig470205 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12210:80094_1:N:0:TTAGGC Contig540798 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10910:80798_1:N:0:TTAGGC Contig127394 5049 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12504:81411_1:N:0:TTAGGC Contig122733 778 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3649:81517_1:N:0:TTAGGC Contig139473 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7910:81760_1:N:0:TTAGGC Contig101747 3795 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9871:84747_1:N:0:TTAGGC Contig289013 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10336:85798_1:N:0:TTAGGC Contig181632 1458 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19494:86609_1:N:0:TTAGGC Contig651224 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16336:87575_1:N:0:TTAGGC Contig402077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10177:90540_1:N:0:TTAGGC Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16530:90946_1:N:0:TTAGGC Contig102838 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6968:91377_1:N:0:TTAGGC Contig389772 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18765:91573_1:N:0:TTAGGC Contig138977 783 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4295:92748_1:N:0:TTAGGC Contig200043 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21091:93184_1:N:0:TTAGGC Contig296591 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13090:93369_1:N:0:TTAGGC Contig44950 1346 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18403:95396_1:N:0:TTAGGC Contig206320 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17481:95685_1:N:0:TTAGGC Contig1113 17491 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14494:96170_1:N:0:TTAGGC Contig618344 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20170:96430_1:N:0:TTAGGC Contig139048 1034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2497:98447_1:N:0:TTAGGC Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1124:98824_1:N:0:TTAGGC Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16737:99421_1:N:0:TTAGGC Contig613809 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13795:100511_1:N:0:TTAGGC Contig201196 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10178:2834_1:N:0:TTAGGC Contig85959 1695 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8006:4352_1:N:0:TTAGGC Contig570507 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9106:4328_1:N:0:TTAGGC Contig686371 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11119:4511_1:N:0:TTAGGC Contig414737 307 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8240:4775_1:N:0:TTAGGC Contig325954 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17881:5573_1:N:0:TTAGGC Contig365437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15462:7993_1:N:0:TTAGGC Contig282460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5124:10422_1:N:0:TTAGGC Contig688103 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15951:10918_1:N:0:TTAGGC Contig175238 982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7993:11985_1:N:0:TTAGGC Contig386999 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18805:13556_1:N:0:TTAGGC Contig87970 8051 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1653:13878_1:N:0:TTAGGC Contig182266 2784 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11269:14656_1:N:0:TTAGGC Contig468427 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2603:16782_1:N:0:TTAGGC Contig206561 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9698:17191_1:N:0:TTAGGA Contig126029 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17065:19726_1:N:0:TTAGGC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15185:20728_1:N:0:TTAGGC Contig8057 8186 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1185:21614_1:N:0:TTAGGC Contig306152 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11181:22158_1:N:0:TTAGGC Contig627812 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8603:22650_1:N:0:TTAGGC Contig37817 19532 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17149:22581_1:N:0:TTAGGC Contig60519 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15829:25863_1:N:0:TTAGGC Contig454609 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2694:26629_1:N:0:TTAGGC Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12188:26619_1:N:0:TTAGGA Contig432604 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6534:27355_1:N:0:TTAGGC Contig695781 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18203:27538_1:N:0:TTAGGC Contig649689 13132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2440:27831_1:N:0:TTAGGC Contig642394 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20755:28816_1:N:0:TTAGGC Contig604173 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8717:29203_1:N:0:TTAGGC Contig10332 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4299:29366_1:N:0:TTAGGC Contig123716 1094 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14049:29348_1:N:0:TTAGGC Contig75027 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19865:31550_1:N:0:TTAGGC Contig209925 805 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4968:32206_1:N:0:TTAGGC Contig10709 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5458:33321_1:N:0:TTAGGC Contig272720 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4161:34624_1:N:0:TTAGGC Contig139473 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14571:39458_1:N:0:TTAGGC Contig77973 3053 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7579:39952_1:N:0:TTAGGC Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21056:40752_1:N:0:TTAGGC Contig559683 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10138:42423_1:N:0:TTAGGC Contig426912 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10991:45631_1:N:0:TTAGGC Contig341961 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11335:45719_1:N:0:TTAGGC Contig186561 658 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15212:46180_1:N:0:TTAGGC Contig175238 983 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21080:47145_1:N:0:TTAGGC Contig454319 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3417:47297_1:N:0:TTAGGC Contig587279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10679:48150_1:N:0:TTAGGC Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19853:49948_1:N:0:TTAGGC Contig10327 751 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1114:50213_1:N:0:TTAGGC Contig616452 145 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6216:50867_1:N:0:TTAGGC Contig109672 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13801:50830_1:N:0:TTAGGC Contig116644 8055 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14738:51095_1:N:0:TTAGGC Contig265370 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4960:51419_1:N:0:TTAGGC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15016:53504_1:N:0:TTAGGC Contig129663 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20153:54056_1:N:0:TTAGGC Contig179377 405 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6451:54836_1:N:0:TTAGGC Contig270163 172 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6584:56667_1:N:0:TTAGGC Contig260676 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9285:58799_1:N:0:TTAGGC Contig40935 10344 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2356:60453_1:N:0:TTAGGC Contig637676 525 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6610:60311_1:N:0:TTAGGC Contig666417 123 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15482:60430_1:N:0:TTAGGC Contig582114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4082:60761_1:N:0:TTAGGC Contig25926 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4201:61125_1:N:0:TTAGGC Contig160055 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10293:61593_1:N:0:TTAGGC Contig135912 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19978:61748_1:N:0:TTAGGC Contig13633 467 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12047:63002_1:N:0:TTAGGC Contig252221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7954:63988_1:N:0:TTAGGC Contig131142 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1837:66043_1:N:0:TTAGGC Contig493352 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9509:66685_1:N:0:TTAGGC Contig496149 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16574:68156_1:N:0:TTAGGC Contig582114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4764:70177_1:N:0:TTAGGC Contig85039 17760 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13199:76705_1:N:0:TTAGGC Contig65497 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5764:77679_1:N:0:TTAGGC Contig554573 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18271:77698_1:N:0:TTAGGC Contig170937 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13111:79221_1:N:0:TTAGGC Contig403649 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19730:79394_1:N:0:TTAGGC Contig100773 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19327:80965_1:N:0:TTAGGC Contig4832 2990 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2939:82865_1:N:0:TTAGGC Contig456250 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6228:83126_1:N:0:TTAGGC Contig188849 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14730:83128_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7180:86662_1:N:0:TTAGGC Contig610701 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7049:87670_1:N:0:TTAGGC Contig519624 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20703:87677_1:N:0:TTAGGC Contig372463 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15372:88776_1:N:0:TTAGGC Contig277106 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21062:88966_1:N:0:TTAGGC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1341:89787_1:N:0:TTAGGC Contig649058 307 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7519:89950_1:N:0:TTAGGC Contig360400 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5607:90964_1:N:0:TTAGGC Contig88172 2576 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5403:92583_1:N:0:TTAGGC Contig226900 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18256:93376_1:N:0:TTAGGC Contig226569 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15168:93722_1:N:0:TTAGGC Contig305045 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7322:94668_1:N:0:TTAGGC Contig114613 1983 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4590:94846_1:N:0:TTAGGC Contig69704 8771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14996:96867_1:N:0:TTAGGC Contig598509 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16110:98228_1:N:0:TTAGGC Contig462768 140 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16259:98770_1:N:0:TTAGGC Contig315612 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4146:2883_1:N:0:TTAGGC Contig4980 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9439:3342_1:N:0:TTAGGC Contig222677 200 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16384:3982_1:N:0:TTAGGC Contig461296 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6907:4366_1:N:0:TTAGGC Contig369327 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18793:5022_1:N:0:TTAGGC Contig635923 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11635:6582_1:N:0:TTAGGC Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11668:6659_1:N:0:TTAGGC Contig437100 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2327:7065_1:N:0:TTAGGC Contig466873 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16369:7419_1:N:0:TTAGGC Contig64508 473 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20426:7558_1:N:0:TTAGGC Contig498442 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18215:8810_1:N:0:TTAGGC Contig66580 9034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16617:9039_1:N:0:TTAGGC Contig30334 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10577:10590_1:N:0:TTAGGC Contig115560 827 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18397:10888_1:N:0:TTAGGC Contig202057 1035 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13457:11147_1:N:0:TTAGGC Contig383547 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14791:11447_1:N:0:TTAGGC Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3088:12685_1:N:0:TTAGGC Contig242482 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6837:12894_1:N:0:TTAGGC Contig346842 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14425:15162_1:N:0:TTAGGC Contig479819 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20847:15507_1:N:0:TTAGGC Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15078:15892_1:N:0:TTAGGC Contig573103 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9095:16021_1:N:0:TTAGGC Contig329152 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20946:16559_1:N:0:TTAGGC Contig682898 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8488:17011_1:N:0:TTAGGC Contig415296 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8087:18160_1:N:0:TTAGGC Contig653957 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20589:19220_1:N:0:TTAGGC Contig507864 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12404:19543_1:N:0:TTAGGC Contig169861 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13348:19997_1:N:0:TTAGGC Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3194:20425_1:N:0:TTAGGC Contig670368 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13155:21618_1:N:0:TTAGGC Contig589573 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16860:22291_1:N:0:TTAGGC Contig399823 125 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10030:22816_1:N:0:TTAGGC Contig595629 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19828:23540_1:N:0:TTAGGC Contig352517 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19856:23583_1:N:0:TTAGGC Contig352517 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4196:24431_1:N:0:TTAGGC Contig679613 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10446:27329_1:N:0:TTAGGC Contig355406 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3856:28133_1:N:0:TTAGGC Contig567701 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8237:29453_1:N:0:TTAGGC Contig50279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16788:30067_1:N:0:TTAGGC Contig620400 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20217:31690_1:N:0:TTAGGC Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10180:31907_1:N:0:TTAGGC Contig254790 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8062:32932_1:N:0:TTAGGC Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2049:36157_1:N:0:TTAGGC Contig37581 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9642:36134_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5884:36251_1:N:0:TTAGGC Contig458007 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4219:38043_1:N:0:TTAGGC Contig272435 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7369:39166_1:N:0:TTAGGC Contig414714 382 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6062:39405_1:N:0:TTAGGC Contig435226 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7786:40241_1:N:0:TTAGGC Contig436133 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12540:40335_1:N:0:TTAGGC Contig152297 808 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3985:42992_1:N:0:TTAGGC Contig87793 11824 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14834:42890_1:N:0:TTAGGC Contig215522 349 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2522:43728_1:N:0:TTAGGC Contig134085 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15482:44944_1:N:0:TTAGGC Contig28243 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7438:46402_1:N:0:TTAGGC Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1975:47175_1:N:0:TTAGGC Contig526955 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3851:47209_1:N:0:TTAGGC Contig357025 210 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12782:50051_1:N:0:TTAGGC Contig177695 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15410:50139_1:N:0:TTAGGC Contig86484 3057 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17612:50949_1:N:0:TTAGGC Contig356944 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6301:51926_1:N:0:TTAGGC Contig453957 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2200:52252_1:N:0:TTAGGC Contig394386 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8257:52583_1:N:0:TTAGGC Contig506991 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4506:52898_1:N:0:TTAGGC Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5241:53786_1:N:0:TTAGGC Contig533827 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7717:54613_1:N:0:TTAGGC Contig322649 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2514:54841_1:N:0:TTAGGC Contig247792 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13309:55287_1:N:0:TTAGGC Contig40512 29079 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18342:55507_1:N:0:TTAGGC Contig679613 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4842:56031_1:N:0:TTAGGC Contig19580 5387 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4894:59902_1:N:0:TTAGGC Contig51168 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7623:61179_1:N:0:TTAGGC Contig289839 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9984:62015_1:N:0:TTAGGC Contig60519 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3211:62919_1:N:0:TTAGGC Contig589199 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19883:63789_1:N:0:TTAGGC Contig492319 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15153:64039_1:N:0:TTAGGC Contig43403 19744 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2188:64405_1:N:0:TTAGGC Contig529891 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14811:65829_1:N:0:TTAGGC Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16899:66562_1:N:0:TTAGGC Contig198911 1139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1919:69459_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5907:69820_1:N:0:TTAGGC Contig160526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17329:70565_1:N:0:TTAGGC Contig83613 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10990:71189_1:N:0:TTAGGC Contig110928 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8545:71490_1:N:0:TTAGGC Contig420178 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20172:73474_1:N:0:TTAGGC Contig334613 406 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18507:73861_1:N:0:TTAGGC Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15225:74224_1:N:0:TTAGGC Contig218157 5152 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19760:74144_1:N:0:TTAGGC Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9823:74660_1:N:0:TTAGGC Contig1113 17492 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10993:75059_1:N:0:TTAGGC Contig35400 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16266:75030_1:N:0:TTAGGC Contig143909 2188 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11857:76514_1:N:0:TTAGGC Contig311470 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13048:77714_1:N:0:TTAGGC Contig534085 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13669:77697_1:N:0:TTAGGC Contig676401 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6932:77962_1:N:0:TTAGGC Contig175716 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1102:78826_1:N:0:TTAGGC Contig577645 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7905:79016_1:N:0:TTAGGC Contig50279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17130:80094_1:N:0:TTAGGC Contig604831 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12618:80301_1:N:0:TTAGGC Contig449444 387 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16639:82111_1:N:0:TTAGGC Contig133604 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4289:82264_1:N:0:TTAGGC Contig54452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20329:88338_1:N:0:TTAGGC Contig319135 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2521:89448_1:N:0:TTAGGC Contig325954 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3326:89476_1:N:0:TTAGGC Contig146631 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7870:89678_1:N:0:TTAGGC Contig499830 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4544:90846_1:N:0:TTAGGC Contig503972 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6221:91755_1:N:0:TTAGGC Contig187571 511 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4736:92362_1:N:0:TTAGGC Contig205088 824 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9152:92438_1:N:0:TTAGGC Contig79333 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14265:92942_1:N:0:TTAGGC Contig362024 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18923:92871_1:N:0:TTAGGC Contig443495 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19232:93014_1:N:0:TTAGGC Contig560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15705:94335_1:N:0:TTAGGC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6852:95042_1:N:0:TTAGGC Contig404159 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7398:95478_1:N:0:TTAGGC Contig549878 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20415:97361_1:N:0:TTAGGC Contig546541 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5589:98273_1:N:0:TTAGGC Contig414154 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1416:98555_1:N:0:TTAGGC Contig430429 177 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12065:100384_1:N:0:TTAGGC Contig455009 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16312:3605_1:N:0:TTAGGC Contig25249 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6421:7204_1:N:0:TTAGGC Contig35496 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5095:7409_1:N:0:TTAGGC Contig552442 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20001:7701_1:N:0:TTAGGC Contig226281 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9957:9349_1:N:0:TTAGGC Contig9848 760 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10990:10639_1:N:0:TTAGGC Contig104498 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1216:11488_1:N:0:TTAGGC Contig41761 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19766:12370_1:N:0:TTAGGC Contig662056 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9552:12932_1:N:0:TTAGGC Contig537711 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12861:15542_1:N:0:TTAGGC Contig508383 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4621:16978_1:N:0:TTAGGC Contig464061 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14051:18818_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5201:19127_1:N:0:TTAGGC Contig589417 1596 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16865:20091_1:N:0:TTAGGC Contig101644 3646 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9458:20500_1:N:0:TTAGGC Contig384960 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15271:20416_1:N:0:TTAGGC Contig180679 445 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8713:20832_1:N:0:TTAGGC Contig93775 1630 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10840:20807_1:N:0:TTAGGC Contig205529 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3326:21711_1:N:0:TTAGGC Contig581536 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15564:21663_1:N:0:TTAGGC Contig297415 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20320:23169_1:N:0:TTAGGC Contig134754 4017 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9527:23597_1:N:0:TTAGGC Contig167329 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5621:24060_1:N:0:TTAGGC Contig271128 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18574:24648_1:N:0:TTAGGC Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15633:24780_1:N:0:TTAGGC Contig330574 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20130:28092_1:N:0:TTAGGC Contig271925 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:21256:28208_1:N:0:TTAGGC Contig221571 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15774:29481_1:N:0:TTAGGC Contig277839 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9455:30897_1:N:0:TTAGGC Contig394405 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5086:31356_1:N:0:TTAGGC Contig189230 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15935:31574_1:N:0:TTAGGC Contig280805 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18343:32044_1:N:0:TTAGGC Contig189109 1297 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10444:32739_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15202:32899_1:N:0:TTAGGC Contig353871 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7148:33520_1:N:0:TTAGGC Contig67905 4361 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16956:37842_1:N:0:TTAGGC Contig650695 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13530:39028_1:N:0:TTAGGC Contig144346 9313 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14648:39671_1:N:0:TTAGGC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9170:40480_1:N:0:TTAGGC Contig129461 2288 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13661:40288_1:N:0:TTAGGC Contig501412 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12828:40501_1:N:0:TTAGGC Contig54452 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17920:40836_1:N:0:TTAGGC Contig196271 467 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8491:41418_1:N:0:TTAGGC Contig573005 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3894:41627_1:N:0:TTAGGC Contig131342 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4802:42168_1:N:0:TTAGGC Contig460818 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19667:42020_1:N:0:TTAGGC Contig77477 4205 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19827:42658_1:N:0:TTAGGC Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11406:43035_1:N:0:TTAGGC Contig57447 3326 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14037:44638_1:N:0:TTAGGC Contig682021 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13669:45655_1:N:0:TTAGGC Contig132567 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16687:47922_1:N:0:TTAGGC Contig300740 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17286:47776_1:N:0:TTAGGC Contig72572 3955 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12748:48142_1:N:0:TTAGGC Contig90846 4712 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9609:50646_1:N:0:TTAGGC Contig5609 4497 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16773:50663_1:N:0:TTAGGC Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16598:50768_1:N:0:TTAGGC Contig125560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7847:52123_1:N:0:TTAGGC Contig108850 972 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 791230 (79.12%) aligned 0 times 109191 (10.92%) aligned exactly 1 time 99579 (9.96%) aligned >1 times 20.88% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 791595 (79.16%) aligned 0 times 109005 (10.90%) aligned exactly 1 time 99400 (9.94%) aligned >1 times 20.84% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 367748 (36.77%) aligned 0 times 219701 (21.97%) aligned exactly 1 time 412551 (41.26%) aligned >1 times 63.23% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 366470 (36.65%) aligned 0 times 219474 (21.95%) aligned exactly 1 time 414056 (41.41%) aligned >1 times 63.35% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 3_TTAGGC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 3_TTAGGC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 401984 Mapping efficiency: 40.2% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2274644 Total methylated C's in CpG context: 88563 Total methylated C's in CHG context: 6338 Total methylated C's in CHH context: 119475 Total methylated C's in Unknown context: 39 Total unmethylated C's in CpG context: 226901 Total unmethylated C's in CHG context: 415652 Total unmethylated C's in CHH context: 1417715 Total unmethylated C's in Unknown context: 384 C methylated in CpG context: 28.1% C methylated in CHG context: 1.5% C methylated in CHH context: 7.8% C methylated in Unknown context (CN or CHN): 9.2% Bismark completed in 0d 1h 6m 1s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/4_TGACCA_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 4_TGACCA_L001_R1_001_trimmed.fq.gz to 4_TGACCA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 4_TGACCA_L001_R1_001_trimmed.fq.gz to 4_TGACCA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 4_TGACCA_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 4_TGACCA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 4_TGACCA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 4_TGACCA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1150:2211_1:N:0:TGACCA 4 * 0 0 * * 0 0 TTTTTTTTGTGTTTGTAGTTATTATATATGT HHHJJJJJJGHHJJJIEHGIIJJJJEIGIII YT:Z:UU Now starting the Bowtie 2 aligner for CTreadGAgenome (reading in sequences from 4_TGACCA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1150:2211_1:N:0:TGACCA 16 Contig29028_GA_converted 49637 0 31M * 0 0 ACATATATAATAACTACAAACACAAAAAAAA IIIGIEJJJJIIGHEIJJJHHGJJJJJJHHH AS:i:-6 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:10C20 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadCTgenome (reading in sequences from 4_TGACCA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1150:2211_1:N:0:TGACCA 4 * 0 0 * * 0 0 TTTTTTTTATATTTATAATCATTATATATAT HHHJJJJJJGHHJJJIEHGIIJJJJEIGIII YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 4_TGACCA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1150:2211_1:N:0:TGACCA 4 * 0 0 * * 0 0 TTTTTTTTATATTTATAATCATTATATATAT HHHJJJJJJGHHJJJIEHGIIJJJJEIGIII YT:Z:UU >>> Writing bisulfite mapping results to 4_TGACCA_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/4_TGACCA_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3694:3427_1:N:0:TGACCA Contig35829 9237 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12412:5358_1:N:0:TGACCA Contig71208 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7844:6549_1:N:0:TGACCA Contig340033 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8346:6919_1:N:0:TGACCA Contig585075 160 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3321:8384_1:N:0:TGACCA Contig449687 132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4313:8808_1:N:0:TGACCA Contig429725 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4340:9085_1:N:0:TGACCA Contig60066 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21033:10230_1:N:0:TGACCA Contig78699 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15793:11361_1:N:0:TGACCA Contig535823 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11954:14053_1:N:0:TGACCA Contig261847 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16641:18728_1:N:0:TGACCA Contig157762 461 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5957:18858_1:N:0:TGACCA Contig694427 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19901:19493_1:N:0:TGACCA Contig508609 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13550:20168_1:N:0:TGACCA Contig70297 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6241:21161_1:N:0:TGACCA Contig606266 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16717:23125_1:N:0:TGACCA Contig400727 158 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13379:23965_1:N:0:TGACCA Contig68472 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15306:23858_1:N:0:TGACCA Contig329075 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12423:24616_1:N:0:TGACCA Contig347350 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16529:25299_1:N:0:TGACCA Contig158704 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12862:27622_1:N:0:TGACCA Contig182344 339 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17164:27822_1:N:0:TGACCA Contig494415 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3459:28247_1:N:0:TGACCA Contig178534 1615 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5779:29067_1:N:0:TGACCA Contig664312 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14502:29379_1:N:0:TGACCA Contig683542 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13453:31453_1:N:0:TGACCA Contig315286 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19529:31630_1:N:0:TGACCA Contig202979 332 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20471:32450_1:N:0:TGACCA Contig14546 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16829:33764_1:N:0:TGACCA Contig110964 1379 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5229:35892_1:N:0:TGACCA Contig254969 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19929:36175_1:N:0:TGACCA Contig105539 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20799:38239_1:N:0:TGACCA Contig537264 311 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14259:40476_1:N:0:TGACCA Contig17057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16381:41749_1:N:0:TGACCA Contig186565 355 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7756:44063_1:N:0:TGACCA Contig229060 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6925:44786_1:N:0:TGACCA Contig317793 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15145:45299_1:N:0:TGACCA Contig687247 235 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4487:46244_1:N:0:TGACCA Contig107991 2034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3385:47467_1:N:0:TGACCA Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18069:47588_1:N:0:TGACCA Contig54772 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12342:48026_1:N:0:TGACCA Contig436348 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6475:49126_1:N:0:TGACCA Contig221393 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3365:50192_1:N:0:TGACCA Contig206279 398 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15316:50608_1:N:0:TGACCA Contig100444 1671 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13878:50911_1:N:0:TGACCA Contig76913 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20557:56391_1:N:0:TGACCA Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13857:56881_1:N:0:TGACCA Contig85962 6904 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1731:57909_1:N:0:TGACCA Contig598279 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14950:58061_1:N:0:TGACCA Contig263879 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19090:58244_1:N:0:TGACCA Contig473666 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11152:58592_1:N:0:TGACCA Contig24301 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18465:59227_1:N:0:TGACCA Contig75703 2857 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13642:60271_1:N:0:TGACCA Contig86113 2771 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4393:64833_1:N:0:TGACCA Contig651943 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2616:66890_1:N:0:TGACCA Contig224868 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7495:70662_1:N:0:TGACCA Contig52175 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4842:71811_1:N:0:TGACCA Contig462797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9742:72822_1:N:0:TGACCA Contig392045 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5143:73064_1:N:0:TGACCA Contig498172 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7018:75312_1:N:0:TGACCA Contig384107 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17387:77515_1:N:0:TGACCA Contig104498 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3061:78623_1:N:0:TGACCA Contig203931 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4855:81806_1:N:0:TGACCA Contig153506 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17660:82937_1:N:0:TGACCA Contig689540 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7107:83731_1:N:0:TGACCA Contig473272 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13634:84818_1:N:0:TGACCA Contig322052 404 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3146:87055_1:N:0:TGACCA Contig296069 106 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11964:87782_1:N:0:TGACCA Contig471186 456 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16027:87940_1:N:0:TGACCA Contig461584 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9085:88595_1:N:0:TGACCA Contig634870 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18512:89583_1:N:0:TGACCA Contig368312 256 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18768:91337_1:N:0:TGACCA Contig173771 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2018:91557_1:N:0:TGACCA Contig335110 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3464:93693_1:N:0:TGACCA Contig116681 5959 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14033:96924_1:N:0:TGACAA Contig86249 3910 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5781:99928_1:N:0:TGACCA Contig466298 234 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4752:2386_1:N:0:TGACCA Contig359990 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17951:4944_1:N:0:TGACCA Contig566837 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6033:5185_1:N:0:TGACCA Contig375270 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7411:9229_1:N:0:TGACCA Contig611659 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7272:10429_1:N:0:TGACCA Contig695489 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5279:10642_1:N:0:TGACCA Contig407304 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12610:10541_1:N:0:TGACCA Contig112264 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18984:10611_1:N:0:TGACCA Contig65629 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6783:10788_1:N:0:TGACCA Contig565776 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1154:11069_1:N:0:TGACCA Contig76535 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18036:11286_1:N:0:TGACCA Contig92463 1150 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11587:11923_1:N:0:TGACCA Contig400725 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4074:13357_1:N:0:TGACCA Contig228335 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4585:13818_1:N:0:TGACCA Contig591329 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16558:14946_1:N:0:TGACCA Contig183189 607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4664:16550_1:N:0:TGACCA Contig183189 606 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5931:16512_1:N:0:TGACCA Contig32961 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4623:17958_1:N:0:TGACCA Contig347849 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17061:22408_1:N:0:TGACCA Contig182116 5115 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2534:24580_1:N:0:TGACCA Contig672951 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5216:24799_1:N:0:TGACCA Contig620430 286 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5365:24789_1:N:0:TGACCA Contig639312 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8159:26204_1:N:0:TGACCA Contig592486 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11752:26106_1:N:0:TGACCA Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4356:27523_1:N:0:TGACCA Contig358084 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6106:29180_1:N:0:TGACCA Contig675953 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9917:29891_1:N:0:TGACCA Contig582394 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2234:30551_1:N:0:TGACCA Contig17084 5512 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17918:34924_1:N:0:TGACCA Contig604395 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8050:35613_1:N:0:TGACCA Contig4032 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15073:35560_1:N:0:TGACCA Contig195704 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14059:39060_1:N:0:TGACCA Contig188257 5032 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8759:39694_1:N:0:TGACCA Contig297056 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1139:42102_1:N:0:TGACCA Contig52263 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17760:42393_1:N:0:TGACCA Contig388499 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3642:42897_1:N:0:TGACCA Contig363777 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11725:43072_1:N:0:TGACCA Contig129663 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8527:44398_1:N:0:TGACCA Contig199610 756 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4694:48556_1:N:0:TGACCA Contig504043 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8311:48788_1:N:0:TGACCA Contig109897 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12263:48859_1:N:0:TGACCA Contig53492 7695 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18923:49439_1:N:0:TGACCA Contig121994 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2107:49510_1:N:0:TGACCA Contig2496 16446 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12731:52859_1:N:0:TGACCA Contig25202 12401 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3920:53052_1:N:0:TGACCA Contig607400 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15977:54028_1:N:0:TGACCA Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17609:57087_1:N:0:TGACCA Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14392:58516_1:N:0:TGACCA Contig660982 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18505:59767_1:N:0:TGACCA Contig477902 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17998:61787_1:N:0:TGACCA Contig297835 141 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4010:62121_1:N:0:TGACCA Contig526913 272 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17650:64482_1:N:0:TGACCA Contig398227 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6333:64760_1:N:0:TGACCA Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11589:66830_1:N:0:TGACCA Contig675953 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3036:73000_1:N:0:TGACCA Contig471935 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12923:73701_1:N:0:TGACCA Contig234894 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3867:77129_1:N:0:TGACCA Contig473217 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15425:77615_1:N:0:TGACCA Contig203034 485 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19888:77967_1:N:0:TGACCA Contig310027 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11027:78253_1:N:0:TGACCA Contig62190 6362 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2698:78510_1:N:0:TGACCA Contig131357 665 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5530:78608_1:N:0:TGACCA Contig88651 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18465:79487_1:N:0:TGACCA Contig428079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7354:82654_1:N:0:TGACCA Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14375:83852_1:N:0:TGACCA Contig116662 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9560:85560_1:N:0:TGACCA Contig311656 513 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8452:85892_1:N:0:TGACCA Contig234397 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9699:85966_1:N:0:TGACCA Contig14410 174 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19033:86533_1:N:0:TGACCA Contig67497 2320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21064:86637_1:N:0:TGACCA Contig44578 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2921:87823_1:N:0:TGACCA Contig85179 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5413:87910_1:N:0:TGACCA Contig25076 128 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5605:87870_1:N:0:TGACCA Contig622343 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6120:88264_1:N:0:TGACCA Contig139854 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21121:92757_1:N:0:TGACCA Contig608953 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8868:93253_1:N:0:TGACCA Contig34926 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11581:95355_1:N:0:TGACCA Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14190:95649_1:N:0:TGACCA Contig584847 113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3423:96932_1:N:0:TGACCA Contig113579 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9991:97217_1:N:0:TGACCA Contig2994 15670 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14126:97133_1:N:0:TGACCA Contig369306 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11322:98459_1:N:0:TGACCA Contig341771 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10151:100129_1:N:0:TGACCA Contig14063 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10888:3603_1:N:0:TGACCA Contig35645 987 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1395:6233_1:N:0:TGACCA Contig288214 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15991:6555_1:N:0:TGACCA Contig197442 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16063:9913_1:N:0:TGACCA Contig471648 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10633:10356_1:N:0:TGACCA Contig226780 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8782:10666_1:N:0:TGACCA Contig2939 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16535:10981_1:N:0:TGACCA Contig365270 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5643:11114_1:N:0:TGACCA Contig606655 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7968:12712_1:N:0:TGACCA Contig322516 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1355:13385_1:N:0:TGACCA Contig462402 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19831:13417_1:N:0:TGACCA Contig606672 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7486:16192_1:N:0:TGACCA Contig465077 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15249:16435_1:N:0:TGACCA Contig153670 1523 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19165:17382_1:N:0:TGACCA Contig249908 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18374:17705_1:N:0:TGACCA Contig618572 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3312:17957_1:N:0:TGACCA Contig540387 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1828:20928_1:N:0:TGACCA Contig56599 18017 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11055:21056_1:N:0:TGACCA Contig452003 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18201:25021_1:N:0:TGACCA Contig433927 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2611:26363_1:N:0:TGACCA Contig298238 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9994:27007_1:N:0:TGACCA Contig57918 32261 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5664:27581_1:N:0:TGACCA Contig73693 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10702:28823_1:N:0:TGACCA Contig132958 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10217:29158_1:N:0:TGACCA Contig689497 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13046:31044_1:N:0:TGACCA Contig418778 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15095:34502_1:N:0:TGACCA Contig539940 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7704:36086_1:N:0:TGACCA Contig598331 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10228:40940_1:N:0:TGACCA Contig602283 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3057:41961_1:N:0:TGACCA Contig305045 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4862:44128_1:N:0:TGACCA Contig145219 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6542:44204_1:N:0:TGACCA Contig337428 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3197:45145_1:N:0:TGACCA Contig8188 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6197:45244_1:N:0:TGACCA Contig233413 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7379:45247_1:N:0:TGACCA Contig226201 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16328:46168_1:N:0:TGACCA Contig19140 10459 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5551:47100_1:N:0:TGACCA Contig561647 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2584:47338_1:N:0:TGACCA Contig76945 8414 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18842:47674_1:N:0:TGACCA Contig381922 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6252:47879_1:N:0:TGACCA Contig31935 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4692:48693_1:N:0:TGACCA Contig209564 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8675:48936_1:N:0:TGACCA Contig450220 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21295:50260_1:N:0:TGACCA Contig635185 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14646:51659_1:N:0:TGACCA Contig62730 10860 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17580:52339_1:N:0:TGACCA Contig561977 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3726:52873_1:N:0:TGACCA Contig267175 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3097:54479_1:N:0:TGACCA Contig377956 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9167:54698_1:N:0:TGACCA Contig236801 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11965:55416_1:N:0:TGACCA Contig356374 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17800:55359_1:N:0:TGACCA Contig365380 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18449:55940_1:N:0:TGACCA Contig550590 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2578:56311_1:N:0:TGACCA Contig129461 2288 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6981:59869_1:N:0:TGACCA Contig509268 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17090:62990_1:N:0:TGACCA Contig577645 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6457:63536_1:N:0:TGACCA Contig48797 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10434:68156_1:N:0:TGACCA Contig587871 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17309:69325_1:N:0:TGACAA Contig46276 5981 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4252:69935_1:N:0:TGACCA Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15885:71163_1:N:0:TGACCA Contig88239 4153 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20828:71288_1:N:0:TGACCA Contig364325 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8733:71584_1:N:0:TGACCA Contig204385 842 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15328:72838_1:N:0:TGACCA Contig149838 2199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8521:73087_1:N:0:TGACCA Contig272849 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10122:73314_1:N:0:TGACCA Contig58165 2665 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5428:76050_1:N:0:TGACCA Contig113215 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18971:77531_1:N:0:TGACCA Contig445465 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5116:77772_1:N:0:TGACCA Contig121490 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9285:79893_1:N:0:TGACCA Contig11900 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16968:80278_1:N:0:TGACCA Contig25163 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13549:80742_1:N:0:TGACCA Contig152341 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7588:82294_1:N:0:TGACCA Contig188524 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17552:83200_1:N:0:TGACCA Contig624065 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18675:83642_1:N:0:TGACCA Contig4526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3212:84873_1:N:0:TGACCA Contig503672 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16029:86084_1:N:0:TGACCA Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13723:86297_1:N:0:TGACCA Contig112285 1350 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5931:88154_1:N:0:TGACCA Contig170528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18142:88069_1:N:0:TGACCA Contig187749 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5785:89390_1:N:0:TGACCA Contig54452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3062:89875_1:N:0:TGACCA Contig586655 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15506:92658_1:N:0:TGACCA Contig155083 5363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1796:93533_1:N:0:TGACCA Contig204733 425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9806:94073_1:N:0:TGACCA Contig83437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6548:94462_1:N:0:TGACCA Contig183728 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12386:94494_1:N:0:TGACCA Contig501279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6724:95272_1:N:0:TGACCA Contig340208 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8524:95452_1:N:0:TGACCA Contig542485 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5668:96408_1:N:0:TGACCA Contig474522 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3793:97607_1:N:0:TGACCA Contig357 32780 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10023:98591_1:N:0:TGACCA Contig239742 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16882:99209_1:N:0:TGACCA Contig325954 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11547:100482_1:N:0:TGACCA Contig484187 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9255:2398_1:N:0:TGACCA Contig425444 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13822:2957_1:N:0:TGACCA Contig128834 2198 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3961:3310_1:N:0:TGACCA Contig136171 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14394:5863_1:N:0:TGACCA Contig28621 15589 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9759:11040_1:N:0:TGACCA Contig31494 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10794:12755_1:N:0:TGACCA Contig99807 3834 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15236:15042_1:N:0:TGACCA Contig207336 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7858:17571_1:N:0:TGACCA Contig437770 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12736:18693_1:N:0:TGACCA Contig200098 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12695:18705_1:N:0:TGACCA Contig200098 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9698:19839_1:N:0:TGACCA Contig91604 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13395:22503_1:N:0:TGACCA Contig109246 2044 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16144:26430_1:N:0:TGACCA Contig552636 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9173:26571_1:N:0:TGACCA Contig357816 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6622:27775_1:N:0:TGACCA Contig530074 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12531:28715_1:N:0:TGACCA Contig13033 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10879:29342_1:N:0:TGACCA Contig279750 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9081:29779_1:N:0:TGACCA Contig94182 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15711:30154_1:N:0:TGACCA Contig569474 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15823:30726_1:N:0:TGACCA Contig429462 106 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1628:32558_1:N:0:TGACCA Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9945:32941_1:N:0:TGACCA Contig553429 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14239:34687_1:N:0:TGACCA Contig323398 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3914:38206_1:N:0:TGACCA Contig657 21519 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11045:38468_1:N:0:TGACCA Contig94742 8681 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1905:41535_1:N:0:TGACCA Contig50451 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4217:41602_1:N:0:TGACCA Contig528890 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18756:45547_1:N:0:TGACCA Contig416249 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1602:46194_1:N:0:TGACCA Contig462294 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3498:46365_1:N:0:TGACCA Contig536712 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8533:48745_1:N:0:TGACCA Contig568937 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17334:50592_1:N:0:TGACCA Contig160526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19947:50649_1:N:0:TGACCA Contig336299 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1432:52154_1:N:0:TAACCA Contig179658 675 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6183:54238_1:N:0:TGACCA Contig541147 119 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6279:54251_1:N:0:TGACCA Contig227755 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1105:57301_1:N:0:TGACCA Contig260373 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8178:58176_1:N:0:TGACCA Contig310070 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17728:58004_1:N:0:TGACCA Contig142584 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20557:65196_1:N:0:TGACCA Contig394412 413 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2385:66103_1:N:0:TGACCA Contig26364 27002 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8485:66614_1:N:0:TGACCA Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12666:69876_1:N:0:TGACCA Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8675:70379_1:N:0:TGACCA Contig526730 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6460:71533_1:N:0:TGACCA Contig468213 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2154:72233_1:N:0:TGACCA Contig55412 12373 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17169:72562_1:N:0:TGACCA Contig581728 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19224:75709_1:N:0:TGACCA Contig237165 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11463:75878_1:N:0:TGACCA Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19483:75987_1:N:0:TGACCA Contig75356 801 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3694:76356_1:N:0:TGACCA Contig416765 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6137:79231_1:N:0:TGACCA Contig647196 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13542:79267_1:N:0:TGACCA Contig428154 173 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11246:82021_1:N:0:TGACCA Contig262166 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7716:82585_1:N:0:TGACCA Contig612911 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16990:82611_1:N:0:TGACCA Contig555437 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20894:82876_1:N:0:TGACCA Contig358256 174 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9151:85652_1:N:0:TGACCA Contig671433 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16608:89118_1:N:0:TGACCA Contig648674 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1703:89380_1:N:0:TGACCA Contig487961 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7949:89964_1:N:0:TGACCA Contig534404 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13418:91719_1:N:0:TGACCA Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18362:93914_1:N:0:TGACCA Contig669098 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10074:94283_1:N:0:TGACCA Contig667526 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10079:95539_1:N:0:TGACCA Contig98971 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17573:97360_1:N:0:TGACCA Contig625798 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6879:97627_1:N:0:TGACCA Contig69406 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3817:97910_1:N:0:TGACCA Contig157719 676 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10557:98103_1:N:0:TGACCA Contig659914 125 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17924:98562_1:N:0:TGACCA Contig471507 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19594:2965_1:N:0:TGACCA Contig649713 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8623:3551_1:N:0:TGACCA Contig565776 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13092:4580_1:N:0:TGACCA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21225:6340_1:N:0:TGACCA Contig467201 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12919:9758_1:N:0:TGACCA Contig61589 13319 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18826:9952_1:N:0:TGACCA Contig13212 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17084:11118_1:N:0:TGACCA Contig57764 7819 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8313:16957_1:N:0:TGACCA Contig385670 129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16280:16811_1:N:0:TGACCA Contig274241 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15149:18259_1:N:0:TGACCA Contig657013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12590:20127_1:N:0:TGACCA Contig634443 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6041:22969_1:N:0:TGACCA Contig12275 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15854:23051_1:N:0:TGACCA Contig97278 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11665:24148_1:N:0:TGACCA Contig75414 2892 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17140:26403_1:N:0:TGACCA Contig81765 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17142:26458_1:N:0:TGACCA Contig278711 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3985:26501_1:N:0:TGACCA Contig257286 822 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2612:27800_1:N:0:TGACCA Contig350866 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3652:28311_1:N:0:TGACCA Contig676039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1677:28691_1:N:0:TGACCA Contig257542 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2147:29429_1:N:0:TGACCA Contig5827 13716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3896:31161_1:N:0:TGACCA Contig58165 2668 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2437:32320_1:N:0:TGACCA Contig113399 883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5940:33856_1:N:0:TGACCA Contig296864 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9273:35685_1:N:0:TGACCA Contig483448 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19910:36733_1:N:0:TGACCA Contig512497 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18982:36915_1:N:0:TGACCA Contig210877 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4713:38434_1:N:0:TGACCA Contig99733 3385 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3875:41278_1:N:0:TGACCA Contig136171 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6590:41275_1:N:0:TGACCA Contig178013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16236:42629_1:N:0:TGACCA Contig450003 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1487:43448_1:N:0:TGACCA Contig271437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2258:43302_1:N:0:TGACCA Contig324470 143 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17595:43683_1:N:0:TGACCA Contig82764 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5720:45057_1:N:0:TGACCA Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11586:45031_1:N:0:TGACCA Contig385412 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9250:45309_1:N:0:TGACCA Contig432337 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6736:46711_1:N:0:TGACCA Contig146483 3940 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6040:53049_1:N:0:TGACCA Contig161448 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9163:54223_1:N:0:TGACCA Contig316909 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3105:57023_1:N:0:TGACCA Contig64118 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8144:58619_1:N:0:TGACCA Contig270296 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16693:58719_1:N:0:TGACCA Contig266358 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2631:58858_1:N:0:TGACCA Contig446173 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18736:61666_1:N:0:TGACCA Contig154388 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3550:61933_1:N:0:TGACCA Contig125017 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11334:62349_1:N:0:TGACCA Contig340497 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17175:64055_1:N:0:TGACCA Contig536442 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12910:66175_1:N:0:TGACCA Contig277425 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16916:67562_1:N:0:TGACCA Contig16367 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1705:68088_1:N:0:TGACCA Contig222858 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15150:68788_1:N:0:TGACCA Contig56827 29197 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15680:69515_1:N:0:TGACCA Contig438052 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2309:70235_1:N:0:TGACCA Contig448129 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14774:70357_1:N:0:TGACCA Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19351:71158_1:N:0:TGACCA Contig9386 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9702:71554_1:N:0:TGACCA Contig34759 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18992:72112_1:N:0:TGACCA Contig436401 168 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6517:73967_1:N:0:TGACCA Contig56737 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18598:74032_1:N:0:TGACCA Contig358759 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2594:78161_1:N:0:TGACCA Contig91197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8751:82200_1:N:0:TGACCA Contig69363 2718 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21144:83864_1:N:0:TGACCA Contig526078 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17544:84811_1:N:0:TGACCA Contig581639 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19694:85246_1:N:0:TGACCA Contig113759 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18697:85590_1:N:0:TGACCA Contig364308 128 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8309:86914_1:N:0:TGACCA Contig4032 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12912:87601_1:N:0:TGACCA Contig16985 787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7315:89263_1:N:0:TGACCA Contig307552 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18084:90908_1:N:0:TGACCA Contig489577 301 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18259:92861_1:N:0:TGACCA Contig525813 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7632:94082_1:N:0:TGACCA Contig667526 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12303:94941_1:N:0:TGACCA Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2199:95088_1:N:0:TGACCA Contig94716 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1494:95571_1:N:0:TGACCA Contig329381 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14657:96067_1:N:0:TGACCA Contig33681 15405 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13964:98478_1:N:0:TGACCA Contig188086 481 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2053:98643_1:N:0:TGACCA Contig593592 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7552:98580_1:N:0:TGACCA Contig226093 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14319:98627_1:N:0:TGACCA Contig112264 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20103:99185_1:N:0:TGACCA Contig89845 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15835:100821_1:N:0:TGACCA Contig40719 22274 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7478:3183_1:N:0:TGACCA Contig366142 107 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13843:4250_1:N:0:TGACCA Contig55038 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18174:5122_1:N:0:TGACCA Contig418566 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10640:5393_1:N:0:TGACCA Contig572313 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20720:5559_1:N:0:TGACCA Contig429936 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4522:7014_1:N:0:TGACCA Contig2901 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18471:7306_1:N:0:TGACCA Contig10893 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7245:8579_1:N:0:TGACCA Contig198366 506 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3526:12020_1:N:0:TGACCA Contig268146 142 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17653:12309_1:N:0:TGACCA Contig96947 10883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18332:14573_1:N:0:TGACCA Contig521042 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9274:15184_1:N:0:TGACCA Contig56256 11236 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19213:15159_1:N:0:TGACCA Contig582114 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18605:16754_1:N:0:TGACCA Contig12338 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8470:18347_1:N:0:TGACCA Contig622798 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5106:18592_1:N:0:TGACCA Contig382894 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14615:18651_1:N:0:TGACCA Contig498074 165 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7210:19149_1:N:0:TGACCA Contig521979 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2614:19749_1:N:0:TGACCA Contig200522 767 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8846:19761_1:N:0:TGACCA Contig130909 1264 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2113:20886_1:N:0:TGACCA Contig3172 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2228:21801_1:N:0:TGACCA Contig322879 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20381:22178_1:N:0:TGACCA Contig184487 748 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3850:22256_1:N:0:TGACCA Contig413161 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3869:22286_1:N:0:TGACCA Contig413161 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2213:22591_1:N:0:TGACCA Contig530378 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12912:23250_1:N:0:TGACCA Contig192971 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13146:23265_1:N:0:TGACCA Contig427046 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10707:23874_1:N:0:TGACCA Contig499949 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18472:24554_1:N:0:TGACCA Contig205813 1523 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7944:26001_1:N:0:TGACCA Contig77494 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16234:27276_1:N:0:TGACCA Contig364609 170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6810:27876_1:N:0:TGACCA Contig450365 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16890:28833_1:N:0:TGACCA Contig104819 3395 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19280:29479_1:N:0:TGACCA Contig77612 3233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15347:30394_1:N:0:TGACCA Contig285840 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12523:31700_1:N:0:TGACCA Contig561567 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5939:32188_1:N:0:TGACCA Contig556038 409 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9684:32436_1:N:0:TGACCA Contig320130 137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3670:33585_1:N:0:TGACCA Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7224:33972_1:N:0:TGACCA Contig390735 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1236:35134_1:N:0:TGACCA Contig427090 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4031:35801_1:N:0:TGACCA Contig183189 606 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10624:36206_1:N:0:TGACCA Contig679681 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4746:39057_1:N:0:TGACCA Contig169157 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13377:40268_1:N:0:TGACCA Contig13722 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5252:41016_1:N:0:TGACCA Contig10170 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13513:41014_1:N:0:TGACCA Contig190301 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2412:42967_1:N:0:TGACCA Contig563932 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6784:44026_1:N:0:TGACCA Contig669916 196 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6757:44056_1:N:0:TGACCA Contig669916 196 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14434:45592_1:N:0:TGACCA Contig310245 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7401:46035_1:N:0:TGACCA Contig465253 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8064:47983_1:N:0:TGACCA Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10570:49488_1:N:0:TGACCA Contig21522 5266 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6187:50458_1:N:0:TGACCA Contig444114 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4596:50758_1:N:0:TGACCA Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13006:51202_1:N:0:TGACCA Contig165915 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8311:53558_1:N:0:TGACCA Contig473994 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10013:54248_1:N:0:TGACCA Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11454:54674_1:N:0:TGACCA Contig177043 974 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13924:54942_1:N:0:TGACCA Contig610299 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10109:59591_1:N:0:TGACCA Contig93208 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3932:60147_1:N:0:TGACAA Contig556038 409 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10974:60081_1:N:0:TGACCA Contig383660 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12893:61350_1:N:0:TGACCA Contig187590 6767 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3798:63291_1:N:0:TGACCA Contig313365 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4217:64508_1:N:0:TGACCA Contig510879 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11133:64755_1:N:0:TGACCA Contig437561 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8385:65457_1:N:0:TGACCA Contig582440 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11175:66627_1:N:0:TGACCA Contig516232 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12156:66763_1:N:0:TGACCA Contig151103 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8430:67702_1:N:0:TGACCA Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6582:67835_1:N:0:TGACCA Contig156042 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2418:68753_1:N:0:TGACCA Contig428436 125 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8589:69507_1:N:0:TGACCA Contig77955 1766 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3708:72351_1:N:0:TGACCA Contig399114 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15756:72447_1:N:0:TGACCA Contig61099 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19045:73519_1:N:0:TGACCA Contig493510 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13841:73769_1:N:0:TGACCA Contig143724 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19505:74360_1:N:0:TGACCA Contig257690 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5686:74941_1:N:0:TGACCA Contig373734 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11236:76185_1:N:0:TGACCA Contig548894 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8499:77156_1:N:0:TGACCA Contig512524 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2725:78403_1:N:0:TGACCA Contig549480 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7512:80897_1:N:0:TGACCA Contig360542 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12636:89134_1:N:0:TGACCA Contig590264 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8690:89286_1:N:0:TGACCA Contig429451 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17116:91690_1:N:0:TGACCA Contig188364 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18098:93709_1:N:0:TGACCA Contig282460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2865:95100_1:N:0:TGACCA Contig399828 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19435:99230_1:N:0:TGACCA Contig578700 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3671:99631_1:N:0:TGACCA Contig530919 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4677:100316_1:N:0:TGACCA Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4475:100671_1:N:0:TGACCA Contig335108 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3372:4351_1:N:0:TGACCA Contig142318 2422 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15038:4434_1:N:0:TGACCA Contig367689 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16550:4568_1:N:0:TGACCA Contig340208 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18946:4880_1:N:0:TGACCA Contig379733 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1275:7875_1:N:0:TGACCA Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13971:10709_1:N:0:TGACCA Contig684652 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4593:11222_1:N:0:TGACCA Contig233955 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12619:11633_1:N:0:TGACCA Contig538108 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7346:12192_1:N:0:TGACCA Contig141762 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17092:13641_1:N:0:TAACCA Contig102028 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11049:14039_1:N:0:TGACCA Contig474606 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2694:14688_1:N:0:TGACCA Contig288205 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10581:15750_1:N:0:TGACCA Contig537990 182 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10012:20225_1:N:0:TGACCA Contig262483 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3639:21231_1:N:0:TGACCA Contig213688 504 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10680:21260_1:N:0:TGACCA Contig155406 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16463:21289_1:N:0:TGACCA Contig27089 25246 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18152:22570_1:N:0:TGACCA Contig660656 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7174:23099_1:N:0:TGACCA Contig30928 139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9787:23368_1:N:0:TGACCA Contig191793 686 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19524:23935_1:N:0:TGACCA Contig273127 133 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8920:25194_1:N:0:TGACCA Contig59209 1646 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2541:25835_1:N:0:TGACCA Contig473270 207 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11674:27471_1:N:0:TGACCA Contig182721 3624 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6288:28260_1:N:0:TGACCA Contig274226 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11002:29245_1:N:0:TGACCA Contig221835 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1732:32336_1:N:0:TGACCA Contig448602 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5980:33738_1:N:0:TGACCA Contig282704 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6199:35737_1:N:0:TGACCA Contig664427 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6551:36096_1:N:0:TGACCA Contig217524 449 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9072:38560_1:N:0:TGACCA Contig639626 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18961:38620_1:N:0:TGACCA Contig628534 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7236:39404_1:N:0:TGACCA Contig61589 13319 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4175:40450_1:N:0:TGACCA Contig634550 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17384:40444_1:N:0:TGACCA Contig472879 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14537:40949_1:N:0:TGACCA Contig328419 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9702:41378_1:N:0:TGACCA Contig336539 176 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19809:42145_1:N:0:TGACCA Contig318385 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15743:42497_1:N:0:TGACCA Contig330735 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18919:43384_1:N:0:TGACCA Contig659416 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19541:43958_1:N:0:TGACCA Contig172031 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5391:44087_1:N:0:TGACCA Contig595261 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13247:45121_1:N:0:TGACCA Contig37857 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5441:46685_1:N:0:TGACCA Contig120354 776 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3466:50255_1:N:0:TGACCA Contig342807 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3263:51300_1:N:0:TGACCA Contig237313 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16924:52056_1:N:0:TGACCA Contig157054 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20124:53093_1:N:0:TGACCA Contig263331 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5397:53927_1:N:0:TGACCA Contig21483 8466 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13921:55692_1:N:0:TGACCA Contig99098 5113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14862:60633_1:N:0:TGACCA Contig231604 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19860:60962_1:N:0:TGACCA Contig546688 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20044:62309_1:N:0:TGACCA Contig211103 764 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21018:62973_1:N:0:TGACCA Contig512713 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1860:64110_1:N:0:TGACCA Contig318159 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19692:65427_1:N:0:TGACCA Contig26049 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18874:65539_1:N:0:TGACCA Contig137089 1037 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13499:66312_1:N:0:TGACCA Contig252813 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11150:67061_1:N:0:TGACCA Contig190804 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7678:67260_1:N:0:TGACCA Contig133832 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12359:69476_1:N:0:TGACCA Contig64114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13576:69484_1:N:0:TGACCA Contig79952 4684 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11843:69553_1:N:0:TGACCA Contig343875 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2605:70499_1:N:0:TGACCA Contig356021 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3571:75393_1:N:0:TGACCA Contig356338 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7501:75337_1:N:0:TGACCA Contig232722 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12042:78527_1:N:0:TGACCA Contig202212 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18338:82171_1:N:0:TGACCA Contig441274 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1509:82440_1:N:0:TGACCA Contig5445 11538 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7013:82939_1:N:0:TGACCA Contig226163 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4752:86216_1:N:0:TGACCA Contig339002 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6992:86775_1:N:0:TGACCA Contig12185 334 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10149:87243_1:N:0:TGACCA Contig379523 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19244:87412_1:N:0:TGACCA Contig331976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16564:87996_1:N:0:TGACCA Contig654616 430 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7037:88843_1:N:0:TGACCA Contig517949 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12610:90178_1:N:0:TGACCA Contig426413 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15461:90454_1:N:0:TGACCA Contig96316 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2939:91526_1:N:0:TGACCA Contig35115 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19611:93194_1:N:0:TGACCA Contig274888 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10080:93432_1:N:0:TGACCA Contig276033 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18011:95036_1:N:0:TGACCA Contig7770 2455 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19668:95306_1:N:0:TGACCA Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15223:95654_1:N:0:TGACCA Contig597093 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3768:96371_1:N:0:TGACCA Contig51477 9293 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12690:96271_1:N:0:TGACCA Contig595703 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3773:96528_1:N:0:TGACCA Contig21940 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8285:96587_1:N:0:TGACCA Contig58603 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8292:96600_1:N:0:TGACCA Contig58603 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15703:97662_1:N:0:TGACCA Contig219467 2677 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2836:99409_1:N:0:TGACCA Contig9576 780 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7627:4756_1:N:0:TGACCA Contig685274 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7318:8587_1:N:0:TGACCA Contig327707 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7350:8611_1:N:0:TGACCA Contig327707 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2268:9006_1:N:0:TGACCA Contig77609 5367 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8354:10566_1:N:0:TGACCA Contig344283 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17866:11531_1:N:0:TGACCA Contig252813 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9741:13828_1:N:0:TGACCA Contig533087 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11385:14446_1:N:0:TGACCA Contig695228 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4986:14517_1:N:0:TGACCA Contig113906 1331 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13644:14916_1:N:0:TGACCA Contig692713 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7367:15875_1:N:0:TGACCA Contig63468 11825 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20324:15932_1:N:0:TGACCA Contig51048 5207 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2383:17125_1:N:0:TGACCA Contig230508 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18806:17468_1:N:0:TGACCA Contig103001 2538 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12606:17780_1:N:0:TGACCA Contig238287 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12913:18499_1:N:0:TGACCA Contig49533 4336 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10946:18901_1:N:0:TGACAA Contig691560 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7217:20856_1:N:0:TGACCA Contig603921 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16093:21028_1:N:0:TGACCA Contig201365 1432 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11668:21300_1:N:0:TGACCA Contig16579 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5811:21539_1:N:0:TGACCA Contig683772 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2523:23621_1:N:0:TGACCA Contig256745 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10299:23822_1:N:0:TGACCA Contig129542 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11113:24223_1:N:0:TGACCA Contig84290 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13553:24507_1:N:0:TGACCA Contig266632 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17417:24576_1:N:0:TGACCA Contig113400 1459 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6866:24884_1:N:0:TGACCA Contig98325 1135 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1842:25658_1:N:0:TGACCA Contig504043 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5730:25788_1:N:0:TGACCA Contig367943 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4601:28442_1:N:0:TGACCA Contig42278 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4426:29357_1:N:0:TGACCA Contig27147 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8568:30245_1:N:0:TGACCA Contig587689 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21263:31329_1:N:0:TGACCA Contig467490 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7237:31760_1:N:0:TGACCA Contig311656 513 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9974:32630_1:N:0:TGACCA Contig561977 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16892:32860_1:N:0:TGACCA Contig143659 1038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1900:33167_1:N:0:TCACCA Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8105:33078_1:N:0:TGACCA Contig92398 13787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8411:33310_1:N:0:TGACCA Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13534:34193_1:N:0:TGACCA Contig513901 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16136:34043_1:N:0:TGACCA Contig512249 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11835:34554_1:N:0:TGACCA Contig669508 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6513:35811_1:N:0:TGACCA Contig467791 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9579:35791_1:N:0:TGACCA Contig141661 9766 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17837:35817_1:N:0:TGACCA Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11832:36309_1:N:0:TGACCA Contig175522 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1307:39022_1:N:0:TGACCA Contig585258 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10468:39119_1:N:0:TGACCA Contig63507 10577 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15603:40433_1:N:0:TGACCA Contig76256 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12189:41609_1:N:0:TGACCA Contig204499 656 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19913:42032_1:N:0:TGACCA Contig414612 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13975:42553_1:N:0:TGACCA Contig559664 757 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15046:42571_1:N:0:TGACCA Contig26870 5055 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7211:43497_1:N:0:TGACCA Contig476381 120 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14612:43796_1:N:0:TGACCA Contig154229 990 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5086:44571_1:N:0:TGACCA Contig27060 237 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14945:47256_1:N:0:TGACCA Contig360607 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19013:47845_1:N:0:TGACCA Contig262483 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21122:49358_1:N:0:TGACCA Contig527164 3861 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15887:50609_1:N:0:TGACCA Contig171606 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17557:50989_1:N:0:TGACCA Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5153:56310_1:N:0:TGACCA Contig221799 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20334:57266_1:N:0:TGACCA Contig59209 1646 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15837:59898_1:N:0:TGACCA Contig221011 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16560:61512_1:N:0:TGACCA Contig228636 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19722:63574_1:N:0:TGACCA Contig323876 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16845:64120_1:N:0:TGACCA Contig45852 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3907:64432_1:N:0:TGACCA Contig687501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4196:66774_1:N:0:TGACCA Contig524583 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2178:68621_1:N:0:TGACCA Contig238442 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13838:70031_1:N:0:TGACCA Contig587299 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16289:72345_1:N:0:TGACCA Contig10581 2092 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9530:73175_1:N:0:TGACCA Contig295524 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16534:73888_1:N:0:TGACCA Contig54452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13021:75956_1:N:0:TGACCA Contig226725 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15629:76586_1:N:0:TGACCA Contig395160 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15942:78549_1:N:0:TGACCA Contig481421 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9630:81829_1:N:0:TGACCA Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5288:87136_1:N:0:TGACCA Contig448035 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9906:87771_1:N:0:TGACCA Contig300694 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19695:89097_1:N:0:TGACCA Contig539940 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5398:92792_1:N:0:TGACCA Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7006:94691_1:N:0:TGACCA Contig287654 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14567:97323_1:N:0:TGACCA Contig538004 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18884:99555_1:N:0:TGACCA Contig328419 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16548:100442_1:N:0:TGACCA Contig539459 271 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14486:100866_1:N:0:TGACCA Contig578412 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19137:100816_1:N:0:TGACCA Contig12009 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20121:100799_1:N:0:TGACCA Contig312699 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11746:101045_1:N:0:TGACCA Contig245890 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10717:2474_1:N:0:TGACCA Contig357354 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12583:2353_1:N:0:TGACCA Contig592325 156 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15650:2452_1:N:0:TGACCA Contig2939 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6248:3525_1:N:0:TGACCA Contig136171 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8523:4812_1:N:0:TGACCA Contig616470 120 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3932:5414_1:N:0:AGACCA Contig94805 10171 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8890:6405_1:N:0:TGACCA Contig16390 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2626:7315_1:N:0:TGACCA Contig329266 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13872:8030_1:N:0:TGACCA Contig221912 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10339:8268_1:N:0:TGACCA Contig50569 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14266:9616_1:N:0:TGACCA Contig385981 138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11155:9892_1:N:0:TGACCA Contig4247 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8058:10730_1:N:0:TGACCA Contig8329 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2530:11363_1:N:0:TGACCA Contig149715 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2789:12047_1:N:0:TGACCA Contig312365 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14523:16029_1:N:0:TGACCA Contig635574 118 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8114:20107_1:N:0:TGACCA Contig670023 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9114:20779_1:N:0:TGACCA Contig395573 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17057:21259_1:N:0:TGACCA Contig180303 2668 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2188:23677_1:N:0:TGACCA Contig80459 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8924:24395_1:N:0:TGACCA Contig275074 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7564:24849_1:N:0:TGACCA Contig396077 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11450:28077_1:N:0:TGACCA Contig143583 4038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7988:29478_1:N:0:TGACCA Contig62815 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7903:32569_1:N:0:TGACCA Contig351483 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1670:33074_1:N:0:TGACCA Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5416:33170_1:N:0:TGACCA Contig324252 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:21262:35556_1:N:0:TGACCA Contig212839 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3278:35934_1:N:0:TGACCA Contig594411 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2425:36838_1:N:0:TGACCA Contig81239 2277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4442:37301_1:N:0:TGACCA Contig632133 1799 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8463:38370_1:N:0:TGACCA Contig9228 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2056:39050_1:N:0:TGACCA Contig320822 117 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5096:40369_1:N:0:TGACCA Contig100995 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1895:41078_1:N:0:TGACCA Contig649058 307 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11107:41785_1:N:0:TGACCA Contig495698 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16219:42925_1:N:0:TGACCA Contig130389 2452 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1997:44867_1:N:0:TGACCA Contig667803 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1776:46948_1:N:0:TGACCA Contig591391 187 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14913:46796_1:N:0:TGACCA Contig542057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2901:47226_1:N:0:TGACCA Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14507:47121_1:N:0:TGAACA Contig248131 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20697:47118_1:N:0:TGACCA Contig238828 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14437:48326_1:N:0:TGACCA Contig460744 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7435:48986_1:N:0:TGACCA Contig607338 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10708:48975_1:N:0:TGACCA Contig525282 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15065:49382_1:N:0:TGACCA Contig352258 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12483:49921_1:N:0:TGACCA Contig664643 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16023:49872_1:N:0:TGACCA Contig78439 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12549:50503_1:N:0:TGACCA Contig167884 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1448:51476_1:N:0:TGACCA Contig430476 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1294:51847_1:N:0:TGACCA Contig670452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19422:53490_1:N:0:TGACCA Contig102858 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8423:54966_1:N:0:TGACCA Contig260648 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12306:54844_1:N:0:TGACCA Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15386:55598_1:N:0:TGACCA Contig473243 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15071:55755_1:N:0:TGACCA Contig351022 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3927:56499_1:N:0:TGACCA Contig433153 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16043:58459_1:N:0:TGACCA Contig9386 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15120:58663_1:N:0:TGACCA Contig269318 137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14992:59315_1:N:0:TGACCA Contig258491 2 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 788749 (78.87%) aligned 0 times 110430 (11.04%) aligned exactly 1 time 100821 (10.08%) aligned >1 times 21.13% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 361286 (36.13%) aligned 0 times 219700 (21.97%) aligned exactly 1 time 419014 (41.90%) aligned >1 times 63.87% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 789761 (78.98%) aligned 0 times 109808 (10.98%) aligned exactly 1 time 100431 (10.04%) aligned >1 times 21.02% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 361479 (36.15%) aligned 0 times 220784 (22.08%) aligned exactly 1 time 417737 (41.77%) aligned >1 times 63.85% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 4_TGACCA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 4_TGACCA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 403617 Mapping efficiency: 40.4% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2264438 Total methylated C's in CpG context: 89788 Total methylated C's in CHG context: 5604 Total methylated C's in CHH context: 114714 Total methylated C's in Unknown context: 34 Total unmethylated C's in CpG context: 217439 Total unmethylated C's in CHG context: 412460 Total unmethylated C's in CHH context: 1424433 Total unmethylated C's in Unknown context: 356 C methylated in CpG context: 29.2% C methylated in CHG context: 1.3% C methylated in CHH context: 7.5% C methylated in Unknown context (CN or CHN): 8.7% Bismark completed in 0d 1h 27m 41s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/5_ACAGTG_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 5_ACAGTG_L001_R1_001_trimmed.fq.gz to 5_ACAGTG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 5_ACAGTG_L001_R1_001_trimmed.fq.gz to 5_ACAGTG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 5_ACAGTG_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 5_ACAGTG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 5_ACAGTG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 5_ACAGTG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1437:2182_1:N:0:ACAGTG 4 * 0 0 * * 0 0 GGGGGGGGTTTTTGGAAAAAAGGGGGTGGTT BBBBBBB-)7??(&)(8>8()&(??7)-BBBBBBB AS:i:-6 XS:i:-6 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:29A1 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 5_ACAGTG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1437:2182_1:N:0:ACAGTG 0 Contig25954_GA_converted 25879 0 31M * 0 0 AAAAAAAATTTTTAAAAAAAAAAAAATAATT BBBBBBB-)7??(&)(8>>> Writing bisulfite mapping results to 5_ACAGTG_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/5_ACAGTG_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16806:2710_1:N:0:ACAGTG Contig454122 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20981:3390_1:N:0:ACAGTG Contig2295 17911 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13882:4867_1:N:0:ACAGTG Contig505879 340 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19004:4915_1:N:0:ACAGTG Contig75356 801 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6682:5560_1:N:0:ACAGTG Contig120070 1878 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14323:6469_1:N:0:ACAGTG Contig460235 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6425:6643_1:N:0:ACAGTG Contig635818 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17042:8935_1:N:0:ACAGTG Contig219029 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20039:8879_1:N:0:ACAGTG Contig60042 4731 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2559:9051_1:N:0:ACAGTG Contig271437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16117:14124_1:N:0:ACAGTG Contig233991 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19089:15560_1:N:0:ACAGTG Contig616320 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17349:19528_1:N:0:ACAGTG Contig111700 13072 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19948:19671_1:N:0:ACAGTG Contig414343 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13740:20801_1:N:0:ACAGTG Contig8687 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13349:21594_1:N:0:ACAGTG Contig427495 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14477:21997_1:N:0:ACAGTG Contig13 84904 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10979:25401_1:N:0:ACAGTG Contig32433 760 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10071:27324_1:N:0:ACAGTG Contig311656 513 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16926:31417_1:N:0:ACAGTG Contig642960 227 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13263:32357_1:N:0:ACAGTG Contig360262 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3854:35929_1:N:0:ACAGTG Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12102:37413_1:N:0:ACAGTG Contig619611 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20206:37419_1:N:0:ACAGTG Contig188524 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14577:37974_1:N:0:ACAGTG Contig16748 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10922:38593_1:N:0:ACAGTG Contig141409 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7407:39810_1:N:0:ACAGTG Contig656202 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6906:40898_1:N:0:ACAGTG Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15596:41632_1:N:0:ACAGTG Contig120722 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8782:42656_1:N:0:ACAGTG Contig139048 1034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15387:43162_1:N:0:ACAGTG Contig412615 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11381:43395_1:N:0:ACAGTG Contig4674 8209 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20915:43365_1:N:0:ACAGTG Contig448500 922 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5300:46259_1:N:0:ACAGTG Contig611330 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10901:47624_1:N:0:ACAGTG Contig67445 2488 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11330:48477_1:N:0:ACAGTG Contig24949 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5436:48503_1:N:0:ACAGTG Contig645616 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19687:50940_1:N:0:ACAGTG Contig663015 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9351:51950_1:N:0:ACAGTG Contig619642 178 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2690:52328_1:N:0:ACAGTG Contig155408 1046 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8285:52706_1:N:0:ACAGTG Contig670362 265 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16280:53390_1:N:0:ACAGTG Contig290221 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11843:53750_1:N:0:ACAGTG Contig63861 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4740:55179_1:N:0:ACAGTG Contig548258 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19399:55203_1:N:0:ACAGTG Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12528:55339_1:N:0:ACAGTG Contig642394 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8133:56550_1:N:0:ACAGTG Contig291404 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1978:56832_1:N:0:ACAGTG Contig423463 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5169:57515_1:N:0:ACAGTG Contig49104 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11121:58405_1:N:0:ACAGTG Contig339177 190 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14696:61682_1:N:0:ACAGTG Contig264801 340 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21278:61590_1:N:0:ACAGTG Contig61294 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11140:63126_1:N:0:ACAGTG Contig94852 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18852:63214_1:N:0:ACAGTG Contig28927 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21121:64247_1:N:0:ACAGTG Contig552446 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7009:64497_1:N:0:ACAGTG Contig116662 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14233:65974_1:N:0:ACAGTG Contig671978 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18066:66907_1:N:0:ACAGTG Contig14919 181 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1160:67392_1:N:0:ACAGTG Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9797:68045_1:N:0:ACAGTG Contig223032 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11201:69935_1:N:0:ACAGTG Contig91312 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14412:70535_1:N:0:ACAGTG Contig201439 766 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15915:74232_1:N:0:ACAGTG Contig185593 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8983:77895_1:N:0:ACAGTG Contig66282 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20173:79254_1:N:0:ACAGTG Contig73937 5659 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17435:79742_1:N:0:ACAGTG Contig108957 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19781:84398_1:N:0:ACAGTG Contig347662 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10033:85640_1:N:0:ACAGTG Contig158923 918 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1913:85885_1:N:0:ACAGTG Contig38659 8315 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15304:86120_1:N:0:ACAGTG Contig106048 4246 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13006:89058_1:N:0:ACAGTG Contig319776 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7238:90401_1:N:0:ACAGTG Contig192752 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1456:91076_1:N:0:ACAGTG Contig16398 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19633:96131_1:N:0:ACAGTG Contig184175 3925 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20046:96155_1:N:0:ACAGTG Contig153201 529 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4109:96668_1:N:0:ACAGTG Contig269795 110 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4946:98920_1:N:0:ACAGTG Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19026:100020_1:N:0:ACAGTG Contig543817 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7586:100593_1:N:0:ACAGTG Contig122784 1229 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9219:4173_1:N:0:ACAGTG Contig267721 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2647:4443_1:N:0:ACAGTG Contig44560 1954 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2160:4570_1:N:0:ACAGTG Contig294033 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16510:5039_1:N:0:ACAGTG Contig573760 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3258:5253_1:N:0:ACAGTG Contig211439 1101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10922:6002_1:N:0:ACAGTG Contig262166 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14669:6309_1:N:0:ACAGTG Contig489194 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11042:7617_1:N:0:ACAGTG Contig466298 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19939:8930_1:N:0:ACAGTG Contig6715 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5105:9394_1:N:0:ACAGTG Contig684277 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7272:9932_1:N:0:ACAGTG Contig75198 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19962:10449_1:N:0:ACAGTG Contig283439 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10362:10540_1:N:0:ACAGTG Contig167902 482 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18448:10540_1:N:0:ACAGTG Contig294150 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4807:11391_1:N:0:ACAGTG Contig486803 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8724:11981_1:N:0:ACAGTG Contig4083 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18124:11838_1:N:0:ACAGTG Contig298422 111 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7391:12483_1:N:0:ACAGTG Contig522536 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7405:12536_1:N:0:ACAGTG Contig53023 9203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15851:12679_1:N:0:ACAGTG Contig175238 982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16765:13632_1:N:0:ACAGTG Contig325954 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5843:17577_1:N:0:ACAGTG Contig126341 3070 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10006:18446_1:N:0:ACAGTG Contig593262 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16310:19629_1:N:0:ACAGTG Contig265091 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19839:20737_1:N:0:ACAGTG Contig112066 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3853:21344_1:N:0:ACAGTG Contig487282 884 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14315:21384_1:N:0:ACAGTG Contig5974 8404 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16442:22175_1:N:0:ACAGTG Contig276867 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4723:22724_1:N:0:ACAGTG Contig16985 787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21085:24517_1:N:0:ACAGTG Contig42527 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8562:24952_1:N:0:ACAGTG Contig5272 6918 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19059:25493_1:N:0:ACAGTG Contig223140 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16712:26796_1:N:0:ACAGTG Contig207456 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12331:27792_1:N:0:ACAGTG Contig329075 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18701:28288_1:N:0:ACAGTG Contig392239 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19218:29191_1:N:0:ACAGTG Contig88172 2576 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15432:29544_1:N:0:ACAGTG Contig495698 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17755:29914_1:N:0:ACAGTG Contig90884 1837 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4634:30334_1:N:0:ACAGTG Contig222325 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10487:31187_1:N:0:ACAGTG Contig426320 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7140:32706_1:N:0:ACAGTG Contig159433 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8170:33845_1:N:0:ACAGTG Contig108957 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2612:34369_1:N:0:ACAGTG Contig511900 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10063:34388_1:N:0:ACAGTG Contig337886 143 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3933:35750_1:N:0:ACAGTG Contig482742 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13321:37914_1:N:0:ACAGTG Contig608213 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16286:38818_1:N:0:ACAGTG Contig16386 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3107:40093_1:N:0:ACAGTG Contig310269 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10646:41505_1:N:0:ACAGTG Contig653177 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20669:45826_1:N:0:ACAGTG Contig495698 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20819:46332_1:N:0:ACAGTG Contig686815 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8516:47122_1:N:0:ACAGTG Contig340977 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7988:48451_1:N:0:ACAGTG Contig170027 3657 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9988:50159_1:N:0:ACAGTG Contig98493 1906 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17632:50404_1:N:0:ACAGTG Contig599138 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16074:51162_1:N:0:ACAGTG Contig556127 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19792:54192_1:N:0:ACAGTG Contig601798 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18969:56946_1:N:0:ACAGTG Contig529227 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9349:57735_1:N:0:ACAGTG Contig284109 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18058:58280_1:N:0:ACAGTG Contig527223 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19311:58304_1:N:0:ACAGTG Contig338324 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16911:58986_1:N:0:ACAGTG Contig380513 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10229:60055_1:N:0:ACAGTG Contig159433 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17476:60731_1:N:0:ACAGTG Contig657457 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8492:61172_1:N:0:ACAGTG Contig295859 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14826:61546_1:N:0:ACAGTG Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8990:63891_1:N:0:ACAGTG Contig280609 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9429:63886_1:N:0:ACAGTG Contig484042 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16534:64174_1:N:0:ACAGTG Contig119413 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11015:64976_1:N:0:ACAGTG Contig35027 12093 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6304:67677_1:N:0:ACAGTG Contig131711 9666 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12031:68094_1:N:0:ACAGTG Contig161050 4175 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2982:68537_1:N:0:ACAGTG Contig291993 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4727:69195_1:N:0:ACAGTG Contig396683 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10764:69936_1:N:0:ACAGTG Contig329726 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16661:69994_1:N:0:ACAGTG Contig78841 22443 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6522:73337_1:N:0:ACAGTG Contig178183 956 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11099:73298_1:N:0:ACAGTG Contig626636 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2143:74733_1:N:0:ACAGTG Contig466507 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2432:74510_1:N:0:ACAGTG Contig244309 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18534:75697_1:N:0:ACAGTG Contig159669 9809 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13330:76558_1:N:0:ACAGTG Contig434959 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5201:78037_1:N:0:ACAGTG Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14603:78989_1:N:0:ACAGTG Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1521:79054_1:N:0:ACAGTG Contig672436 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4797:80136_1:N:0:ACAGTG Contig183189 607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9957:80497_1:N:0:ACAGTG Contig1629 21917 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12919:80705_1:N:0:ACAGTG Contig137580 1063 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5174:82465_1:N:0:ACAGTG Contig174804 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5966:83360_1:N:0:ACAGTG Contig58165 2665 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9817:83946_1:N:0:ACAGTG Contig50844 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8353:84187_1:N:0:ACAGTG Contig113214 3363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8344:84287_1:N:0:ACAGTG Contig564182 121 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1303:86609_1:N:0:ACAGTG Contig98073 6377 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7182:88514_1:N:0:ACAGTG Contig522586 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19769:88845_1:N:0:ACAGTG Contig182171 1318 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18864:89293_1:N:0:ACAGTG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10074:93340_1:N:0:ACAGTG Contig34156 5800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8741:97461_1:N:0:ACAGTG Contig565153 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16017:98352_1:N:0:ACAGTG Contig19580 5388 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20746:99204_1:N:0:ACAGTG Contig298552 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10178:4291_1:N:0:ACAGTG Contig49514 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21125:4455_1:N:0:ACAGTG Contig351254 193 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13352:4613_1:N:0:ACAGTG Contig134290 1092 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6461:4841_1:N:0:ACAGTG Contig62730 10859 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7795:5921_1:N:0:ACAGTG Contig268099 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1622:6881_1:N:0:ACAGTG Contig4313 6790 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8598:8949_1:N:0:ACAGTG Contig51851 912 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18152:9362_1:N:0:ACAGTG Contig542057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20464:9328_1:N:0:ACAGTG Contig5974 8403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19309:11168_1:N:0:ACAGTG Contig556672 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8223:11678_1:N:0:ACAGTG Contig196323 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6033:14514_1:N:0:ACAGTG Contig19580 5388 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11698:15578_1:N:0:ACAGTG Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18382:17726_1:N:0:ACAGTG Contig187363 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19910:19251_1:N:0:ACAGTG Contig568374 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11936:19766_1:N:0:ACAGTG Contig234837 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11902:19774_1:N:0:ACAGTG Contig234837 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9399:21296_1:N:0:ACAGTG Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6202:21714_1:N:0:ACAGTG Contig612958 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12174:22053_1:N:0:ACAGTG Contig142725 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9854:23866_1:N:0:ACAGTG Contig594240 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11752:23980_1:N:0:ACAGTG Contig184175 3925 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3354:26691_1:N:0:ACAGTG Contig123341 1383 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8036:28494_1:N:0:ACAGTG Contig527237 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5436:29532_1:N:0:ACAGTG Contig382152 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7299:29680_1:N:0:ACAGTG Contig665817 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12213:30383_1:N:0:ACAGTG Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6878:33169_1:N:0:ACAGTG Contig158155 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4755:34672_1:N:0:ACAGTG Contig486377 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8473:36021_1:N:0:ACAGTG Contig71694 3766 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4900:36416_1:N:0:ACAGTG Contig70067 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11776:36994_1:N:0:ACAGTG Contig46850 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13239:36965_1:N:0:ACAGTG Contig219580 567 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18907:39240_1:N:0:ACAGTG Contig644198 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14376:39668_1:N:0:ACAGTG Contig655615 389 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16817:40299_1:N:0:ACAGTG Contig681504 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3116:41561_1:N:0:ACAGTG Contig594240 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17165:42242_1:N:0:ACAGTG Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17065:43465_1:N:0:ACAGTG Contig279010 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9507:43659_1:N:0:ACAGTG Contig376215 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18210:44903_1:N:0:ACAGTG Contig618920 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9210:45515_1:N:0:ACAGTG Contig683399 117 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15686:49576_1:N:0:ACAGTG Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2548:55477_1:N:0:ACAGTG Contig322052 401 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7323:55832_1:N:0:ACAGTG Contig23033 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2742:56205_1:N:0:ACAGTG Contig348223 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12038:57148_1:N:0:ACAGTG Contig556038 407 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12515:57147_1:N:0:ACAGTG Contig109317 9266 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11124:58843_1:N:0:ACAGTG Contig433396 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20902:59629_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1820:59922_1:N:0:ACAGTG Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4753:63996_1:N:0:ACAGTG Contig165074 800 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12197:65126_1:N:0:ACAGTG Contig376108 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16014:68587_1:N:0:ACAGTG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20922:69088_1:N:0:ACAGTG Contig173903 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7734:69301_1:N:0:ACAGTG Contig409738 232 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16186:70085_1:N:0:ACAGTG Contig185073 452 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19192:71153_1:N:0:ACAGTG Contig590156 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17465:74058_1:N:0:ACAGTG Contig93734 7001 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14236:75152_1:N:0:ACAGTG Contig387018 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11481:75744_1:N:0:ACAGTG Contig323383 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12983:77098_1:N:0:ACAGTG Contig617116 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17306:77870_1:N:0:ACAGTG Contig13364 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17330:79761_1:N:0:ACAGTG Contig454130 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3899:82645_1:N:0:ACAGTG Contig48050 6833 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15455:83747_1:N:0:ACAGTG Contig117986 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7891:84796_1:N:0:ACAGTG Contig233419 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3107:85884_1:N:0:ACAGTG Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18537:87056_1:N:0:ACAGTG Contig569826 346 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18310:87414_1:N:0:ACAGTG Contig537730 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6681:87993_1:N:0:ACAGTG Contig403306 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19331:88615_1:N:0:ACAGTG Contig467114 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5962:89038_1:N:0:ACAGTG Contig88172 2576 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4251:90212_1:N:0:ACAGTG Contig580345 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19580:90951_1:N:0:ACAGTG Contig642394 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9293:93109_1:N:0:ACAGTG Contig176342 650 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14315:98664_1:N:0:ACAGTG Contig20903 5446 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12776:99778_1:N:0:ACAGTG Contig371039 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14304:2929_1:N:0:ACAGTG Contig651442 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21189:2938_1:N:0:ACAGTG Contig406433 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6140:3479_1:N:0:ACAGTG Contig549480 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17317:4165_1:N:0:ACAGTG Contig47177 1297 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4916:6849_1:N:0:ACAGTG Contig598079 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14507:7387_1:N:0:ACAGTG Contig302039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2335:7571_1:N:0:ACAGTG Contig274843 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8200:8459_1:N:0:ACAGTG Contig669684 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18041:8472_1:N:0:ACAGTG Contig677993 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16698:11139_1:N:0:ACAGTG Contig690156 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2439:11878_1:N:0:ACAGTG Contig115891 3687 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9168:12993_1:N:0:ACAGTG Contig427892 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14110:15695_1:N:0:ACAGTG Contig679613 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14775:18210_1:N:0:ACAGTG Contig197017 510 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20959:18888_1:N:0:ACAGTG Contig494022 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2318:19237_1:N:0:ACAGTG Contig538598 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8060:19648_1:N:0:ACAGTG Contig478443 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2197:20927_1:N:0:ACAGTG Contig561380 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16626:21351_1:N:0:ACAGTG Contig347117 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3297:21905_1:N:0:ACAGTG Contig147186 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1748:22819_1:N:0:ACAGTG Contig88172 2576 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3540:23205_1:N:0:ACAGTG Contig49983 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11277:24464_1:N:0:ACAGTG Contig586519 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8876:24734_1:N:0:ACAGTG Contig588166 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4347:26297_1:N:0:ACAGTG Contig314217 139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17220:28050_1:N:0:ACAGTG Contig414714 382 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1304:28827_1:N:0:ACAGTG Contig58165 2665 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3926:31919_1:N:0:ACAGTG Contig341468 145 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16145:33633_1:N:0:ACAGTG Contig23910 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5225:34217_1:N:0:AAAGTG Contig138148 822 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5877:34658_1:N:0:ACAGTG Contig328874 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7578:34573_1:N:0:ACAGTG Contig182 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16877:37611_1:N:0:ACAGTG Contig478193 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3991:37983_1:N:0:ACAGTG Contig1548 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16170:37804_1:N:0:ACAGTG Contig503712 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5845:39758_1:N:0:ACAGTG Contig311656 513 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15357:41365_1:N:0:ACAGTG Contig367943 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21029:41863_1:N:0:ACAGTG Contig109778 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5393:42034_1:N:0:ACAGTG Contig471648 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3638:42937_1:N:0:ACAGTG Contig358603 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4624:42757_1:N:0:ACAGTG Contig141455 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5249:44345_1:N:0:ACAGTG Contig58315 6379 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8027:44641_1:N:0:ACAGTG Contig455433 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16264:44830_1:N:0:ACAGTG Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12820:47122_1:N:0:ACAGTG Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9175:47793_1:N:0:ACAGTG Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1960:48366_1:N:0:ACAGTG Contig115924 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14211:48877_1:N:0:ACAGTG Contig428356 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18402:49049_1:N:0:ACAATG Contig102792 2499 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19096:51921_1:N:0:ACAGTG Contig240294 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15851:52935_1:N:0:ACAGTG Contig544405 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10947:53356_1:N:0:ACAGTG Contig51546 9167 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8310:54280_1:N:0:ACAGTG Contig218200 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20584:56741_1:N:0:ACAGTG Contig249933 1865 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8904:57118_1:N:0:ACAGTG Contig382081 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12354:57730_1:N:0:ACAGTG Contig81763 11347 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3630:58421_1:N:0:ACAGTG Contig257286 825 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5543:60028_1:N:0:ACAGTG Contig53023 9204 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5190:60562_1:N:0:ACAGTG Contig345337 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10599:62097_1:N:0:ACAGTG Contig344147 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14070:63514_1:N:0:ACAGTG Contig471059 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11145:66305_1:N:0:ACAGTA Contig193747 509 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20005:67372_1:N:0:ACAGTG Contig76353 1874 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14471:67675_1:N:0:ACAGTG Contig453826 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19267:69982_1:N:0:ACAGTG Contig611868 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4217:71597_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20485:72043_1:N:0:ACAGTG Contig219247 282 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4436:72411_1:N:0:ACAGTG Contig542485 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1221:74184_1:N:0:ACAGTG Contig635343 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1241:74219_1:N:0:ACAGTG Contig635343 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5593:75467_1:N:0:ACAGTG Contig353994 190 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3916:75860_1:N:0:ACAGTG Contig443794 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5349:76490_1:N:0:ACAGTG Contig196489 403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12808:77013_1:N:0:ACAGTG Contig432576 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9978:77704_1:N:0:ACAGTG Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8632:79074_1:N:0:ACAGTG Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18433:80828_1:N:0:ACAGTG Contig140513 697 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1581:87501_1:N:0:ACAGTG Contig366895 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10371:88892_1:N:0:ACAGTG Contig465555 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14330:91636_1:N:0:ACAGTG Contig221640 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4402:92141_1:N:0:ACAGTG Contig175963 356 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13558:92458_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9293:94707_1:N:0:ACAGTG Contig71208 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6741:95727_1:N:0:ACAGTG Contig53023 9204 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3836:96022_1:N:0:ACAGTG Contig289669 367 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14395:96579_1:N:0:ACAGTG Contig588509 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19387:97913_1:N:0:ACAGTG Contig64446 6862 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10941:99078_1:N:0:ACAGTG Contig545918 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16087:100291_1:N:0:ACAGTG Contig166447 712 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6213:100724_1:N:0:ACAGTG Contig532333 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15676:100921_1:N:0:ACAGTG Contig60469 11178 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19508:2806_1:N:0:ACAGTG Contig250216 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3099:3677_1:N:0:ACAGTG Contig485388 136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21193:3990_1:N:0:ACAGTG Contig166001 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9688:4433_1:N:0:ACAGTG Contig367873 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3699:4739_1:N:0:ACAGTG Contig543400 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21298:5305_1:N:0:ACAGTG Contig459832 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5192:5544_1:N:0:ACAGTG Contig70354 10279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16340:5514_1:N:0:ACAGTG Contig165520 473 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13258:5996_1:N:0:ACAGTG Contig690108 338 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5336:6124_1:N:0:ACAGTG Contig126350 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18425:6280_1:N:0:ACAGTG Contig668319 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15887:6922_1:N:0:ACAGTG Contig549621 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11818:7050_1:N:0:ACAGTG Contig203124 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18747:11183_1:N:0:ACAGTG Contig162513 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2589:12712_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4964:12648_1:N:0:ACAGTG Contig606655 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14921:13264_1:N:0:ACAGTG Contig515424 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20910:14543_1:N:0:ACAGTG Contig561885 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5050:15205_1:N:0:ACAGTG Contig18716 78247 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12208:17069_1:N:0:ACAGTG Contig551859 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14111:17464_1:N:0:ACAGTG Contig386684 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6437:17809_1:N:0:ACAGTG Contig349370 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6183:19449_1:N:0:ACAGTG Contig251773 885 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17473:19997_1:N:0:ACAGTG Contig575500 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16231:20130_1:N:0:ACAGTG Contig256455 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18942:21619_1:N:0:ACAGTG Contig406027 175 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7881:22126_1:N:0:ACAGTG Contig319334 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21201:22224_1:N:0:ACAGTG Contig641727 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10336:24080_1:N:0:ACAGTG Contig372830 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15375:26386_1:N:0:ACAGTG Contig325954 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10889:28116_1:N:0:ACAGTG Contig635923 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4679:28422_1:N:0:ACAGTG Contig288007 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11151:28980_1:N:0:ACAGTG Contig473028 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11169:29489_1:N:0:ACAGTG Contig446085 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5408:29811_1:N:0:ACAGTG Contig393986 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13830:32009_1:N:0:ACAGTG Contig415938 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18713:34076_1:N:0:ACAGTG Contig73895 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4506:34648_1:N:0:ACAGTG Contig76044 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7660:35640_1:N:0:ACAGTG Contig348835 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3133:37439_1:N:0:ACAGTG Contig586632 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3409:37632_1:N:0:ACAGTG Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2839:38101_1:N:0:ACAGTG Contig49016 3486 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13780:40758_1:N:0:ACAGTG Contig595528 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11001:41239_1:N:0:ACAGTG Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8983:41999_1:N:0:ACAGTG Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13449:41991_1:N:0:ACAGTG Contig22900 28601 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20073:43262_1:N:0:ACAGTG Contig192366 419 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10750:45411_1:N:0:ACAGTG Contig523287 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3178:46126_1:N:0:ACAGTG Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16973:48016_1:N:0:ACAGTG Contig159488 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2206:48919_1:N:0:ACAGTG Contig209307 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9650:49102_1:N:0:ACAGTG Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19337:50474_1:N:0:ACAGTG Contig510614 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12600:51178_1:N:0:ACAGTG Contig690069 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4056:52190_1:N:0:ACAGTG Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6599:53036_1:N:0:ACAGTG Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14605:54036_1:N:0:ACAGTG Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21216:56723_1:N:0:ACAGTG Contig280178 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12100:57710_1:N:0:ACAGTG Contig378309 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5631:58003_1:N:0:ACAGTG Contig551183 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10367:59495_1:N:0:ACAGTG Contig298626 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16686:60920_1:N:0:ACAGTG Contig140757 10895 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2647:62169_1:N:0:ACAGTG Contig595185 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17724:62353_1:N:0:ACAGTG Contig521979 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19489:63315_1:N:0:ACAGTG Contig586278 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2769:63853_1:N:0:ACAGTG Contig453954 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8204:65285_1:N:0:ACAGTG Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2153:67624_1:N:0:ACAGTG Contig215748 1221 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2079:69078_1:N:0:ACAGTG Contig151825 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10817:71657_1:N:0:ACAGTG Contig53023 9203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7180:72379_1:N:0:ACAGTG Contig400624 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21094:72428_1:N:0:ACAGTG Contig316655 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11209:77282_1:N:0:ACAGTG Contig371017 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10602:79796_1:N:0:ACAGTG Contig608092 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1425:80494_1:N:0:ACAGTG Contig98714 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12179:81226_1:N:0:ACAGTG Contig684066 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11871:83396_1:N:0:ACAGTG Contig544135 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18359:84971_1:N:0:ACAGTG Contig279849 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19771:85687_1:N:0:ACAGTG Contig298868 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8915:86506_1:N:0:ACAGTG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8742:87357_1:N:0:ACAGTG Contig457780 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1163:89053_1:N:0:ACAGTG Contig395361 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11113:90951_1:N:0:ACAGTG Contig480786 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11937:91378_1:N:0:ACAGTG Contig230349 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12233:94401_1:N:0:ACAGTG Contig161662 423 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16998:94718_1:N:0:ACAGTG Contig81329 4632 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14173:95425_1:N:0:ACAGTG Contig175746 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15039:96151_1:N:0:ACAGTG Contig42377 14873 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3940:96272_1:N:0:ACAGTG Contig20217 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2684:96523_1:N:0:ACAGTG Contig282502 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13905:96866_1:N:0:ACAGTG Contig107308 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21141:97139_1:N:0:ACAGTG Contig371399 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6488:98371_1:N:0:ACAGTG Contig217423 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1984:98585_1:N:0:ACAGTG Contig1973 41588 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16773:98845_1:N:0:ACAGTG Contig212938 1394 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18098:100411_1:N:0:ACAGTG Contig153607 442 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19681:100966_1:N:0:ACAGTG Contig400639 162 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4328:2151_1:N:0:ACAGTG Contig3459 21352 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12569:5090_1:N:0:ACAGTG Contig561977 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7677:5678_1:N:0:ACAGTG Contig393059 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15945:5679_1:N:0:ACAGTG Contig632656 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9011:6467_1:N:0:ACAGTG Contig135094 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2655:6775_1:N:0:ACAGTG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19221:7076_1:N:0:ACAGTG Contig337464 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10478:7998_1:N:0:ACAGTG Contig45852 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12713:8095_1:N:0:ACAGTG Contig310027 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9687:8678_1:N:0:ACAGTG Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1655:9051_1:N:0:ACAGTG Contig436634 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4185:9175_1:N:0:ACAGTG Contig223347 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11821:11978_1:N:0:ACAGTG Contig287273 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6499:14006_1:N:0:ACAGTG Contig641306 816 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6396:14918_1:N:0:ACAGTG Contig25331 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1983:15278_1:N:0:ACAGTG Contig406952 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9712:15318_1:N:0:ACAGTG Contig12936 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19279:15254_1:N:0:ACAGTG Contig25479 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18446:16143_1:N:0:ACAGTG Contig444232 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5132:16632_1:N:0:ACAGTG Contig283410 159 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16822:16630_1:N:0:ACAGTG Contig124461 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12665:16849_1:N:0:ACAGTG Contig579637 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11626:17081_1:N:0:ACAGTG Contig99467 1091 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18176:18220_1:N:0:ACAGTG Contig79658 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10935:19678_1:N:0:ACAGTG Contig83131 3661 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2694:20573_1:N:0:ACAGTG Contig399451 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10878:22149_1:N:0:ACAGTG Contig651649 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6251:22286_1:N:0:ACAGTG Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17694:22474_1:N:0:ACAGTG Contig16953 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7459:22819_1:N:0:ACAGTG Contig291813 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10078:23708_1:N:0:ACAGTG Contig9548 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4014:25275_1:N:0:ACAGTG Contig300375 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4044:27937_1:N:0:ACAGTG Contig461268 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11521:28739_1:N:0:ACAGTG Contig12035 1251 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10970:29428_1:N:0:ACAGTG Contig120722 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11643:29271_1:N:0:ACAGTG Contig315609 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12008:29368_1:N:0:ACAGTG Contig249318 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18631:32940_1:N:0:ACAGTG Contig22227 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11025:34139_1:N:0:ACAGTG Contig502949 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18344:35307_1:N:0:ACAGTG Contig281732 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17372:36262_1:N:0:ACAGTG Contig242465 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10121:36813_1:N:0:ACAGTG Contig290670 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8743:37339_1:N:0:ACAGTG Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2803:38111_1:N:0:ACAGTG Contig131711 9666 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21264:38506_1:N:0:ACAGTG Contig644884 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10873:39793_1:N:0:ACAGTG Contig463718 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4459:40461_1:N:0:ACAGTG Contig294519 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4271:42584_1:N:0:ACAGTG Contig580099 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10934:44516_1:N:0:ACAGTG Contig360983 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14269:45751_1:N:0:ACAGTG Contig129461 2285 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10413:46773_1:N:0:ACAGTG Contig31374 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12895:46882_1:N:0:ACAGTG Contig432995 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19373:47757_1:N:0:ACAGTG Contig233723 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1294:49177_1:N:0:ACAGTG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5667:49629_1:N:0:ACAGTG Contig9137 6895 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11327:49561_1:N:0:ACAGTG Contig691812 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6392:50406_1:N:0:ACAGTG Contig162322 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5258:52721_1:N:0:ACAGTG Contig140932 1056 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19048:56362_1:N:0:ACAGTG Contig209981 755 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9350:56777_1:N:0:ACAGTG Contig427991 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13930:56778_1:N:0:ACAGTG Contig423087 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12224:58185_1:N:0:ACAGTG Contig195358 234 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4505:58765_1:N:0:ACAGTG Contig582114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3335:61030_1:N:0:ACAGTG Contig108298 1716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20527:62120_1:N:0:ACAGTG Contig582147 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16033:62430_1:N:0:ACAGTG Contig367943 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20705:63907_1:N:0:ACAGTG Contig461511 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20102:65785_1:N:0:ACAGTG Contig491128 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11503:67030_1:N:0:ACAGTG Contig105102 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2690:67338_1:N:0:ACAGTG Contig144151 1064 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13612:67981_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12029:69388_1:N:0:ACAGTG Contig288479 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13905:69435_1:N:0:ACAGTG Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19077:69885_1:N:0:ACAGTG Contig325954 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19824:71462_1:N:0:ACAGTG Contig319506 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5887:74257_1:N:0:ACAGTG Contig501049 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5551:74739_1:N:0:ACAGTG Contig552872 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8509:74846_1:N:0:ACAGTG Contig121994 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4507:75386_1:N:0:ACAGTG Contig71779 14342 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17086:76273_1:N:0:ACAGTG Contig593455 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1313:76661_1:N:0:ACAGTG Contig266657 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6773:77339_1:N:0:ACAGTG Contig422267 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10821:77579_1:N:0:ACAGTG Contig27322 3522 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5260:77775_1:N:0:ACAGTG Contig231395 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10389:78222_1:N:0:ACAGTG Contig87238 4280 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12487:78820_1:N:0:ACAGTG Contig110295 2996 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15538:79224_1:N:0:ACAGTG Contig276758 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11906:79260_1:N:0:ACAGTG Contig315137 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17201:79314_1:N:0:ACAGTG Contig206982 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18243:79271_1:N:0:ACAGTG Contig91220 7579 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12467:79520_1:N:0:ACAGTG Contig476751 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16173:80213_1:N:0:ACAGTG Contig431712 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6327:82343_1:N:0:ACAGTG Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18946:84334_1:N:0:ACAGTG Contig491128 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16954:85681_1:N:0:ACAGTG Contig117977 180 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5812:87456_1:N:0:ACAGTG Contig114890 6374 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2622:87527_1:N:0:ACAGTG Contig184236 992 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4872:88412_1:N:0:ACAGTG Contig14829 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14213:88446_1:N:0:ACAGTG Contig459378 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16071:89266_1:N:0:ACAGTG Contig418566 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12774:90528_1:N:0:ACAGTG Contig231157 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16883:90524_1:N:0:ACAGTG Contig585519 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3567:93651_1:N:0:ACAGTG Contig131673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11690:95124_1:N:0:ACAGTG Contig345702 456 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10666:95378_1:N:0:ACAGTG Contig445599 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18372:96838_1:N:0:ACAGTG Contig105925 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16944:97317_1:N:0:ACAGTG Contig179813 400 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18527:97741_1:N:0:ACAGTG Contig148113 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16187:98943_1:N:0:ACAGTG Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8221:100277_1:N:0:ACAGTG Contig104327 1568 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19478:100611_1:N:0:ACAGTG Contig396694 212 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19914:2393_1:N:0:ACAGTG Contig260781 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3416:3313_1:N:0:ACAGTG Contig122701 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11963:3666_1:N:0:ACAGTG Contig124743 837 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3182:3862_1:N:0:ACAGTG Contig108964 1996 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3868:6376_1:N:0:ACAGTG Contig648674 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19666:6323_1:N:0:ACAGTG Contig595250 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5095:6825_1:N:0:ACAGTG Contig116630 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10172:11109_1:N:0:ACAGTG Contig604194 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6882:11353_1:N:0:ACAGTG Contig94539 7567 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1415:11707_1:N:0:ACAGTG Contig690329 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2935:11891_1:N:0:ACAGTG Contig192193 1196 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9796:12679_1:N:0:ACAGTG Contig360647 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20811:13067_1:N:0:ACAGTG Contig260781 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12280:13728_1:N:0:ACAGTG Contig145794 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6795:14151_1:N:0:ACAGTG Contig127290 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14355:14106_1:N:0:ACAGTG Contig522498 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11427:15203_1:N:0:ACAGTG Contig475610 317 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13604:15203_1:N:0:ACAGTG Contig537474 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15514:15147_1:N:0:ACAGTG Contig122434 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17906:15493_1:N:0:ACAGTG Contig694001 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13260:15924_1:N:0:ACAGTG Contig105749 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1428:16979_1:N:0:ACAGTG Contig127394 5049 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17618:18518_1:N:0:ACAGTG Contig523942 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5491:18847_1:N:0:ACAGTG Contig141756 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13977:20617_1:N:0:ACAGTG Contig646821 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2672:24560_1:N:0:ACAGTG Contig338914 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12441:25071_1:N:0:ACAGTG Contig67353 6077 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10340:25873_1:N:0:ACAGTG Contig233991 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3004:30195_1:N:0:ACAGTG Contig113399 883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6828:30083_1:N:0:ACAGTG Contig41295 7607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17359:30216_1:N:0:ACAGTG Contig419112 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7091:31304_1:N:0:ACAGTG Contig460771 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2183:31596_1:N:0:ACAGTG Contig556433 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4297:32968_1:N:0:ACAGTG Contig240021 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4926:35966_1:N:0:ACAGTG Contig304376 10130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8332:36718_1:N:0:ACAGTG Contig209630 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18711:37724_1:N:0:ACAGTG Contig61874 578 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9375:38291_1:N:0:ACAGTG Contig101987 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6125:39642_1:N:0:ACAGTG Contig116847 799 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15893:40719_1:N:0:ACAGTG Contig529050 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15886:40753_1:N:0:ACAGTG Contig529050 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16117:42503_1:N:0:ACAGTG Contig274362 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18491:42551_1:N:0:ACAGTG Contig521995 113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11233:45625_1:N:0:ACAGTG Contig102854 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15483:46150_1:N:0:ACAGTG Contig573158 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9889:46662_1:N:0:ACAGTG Contig171920 2190 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19478:47157_1:N:0:ACAGTG Contig237929 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15104:48286_1:N:0:ACAGTG Contig355037 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13446:48699_1:N:0:ACAGTG Contig468213 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16493:48883_1:N:0:ACAGTG Contig12698 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17593:49233_1:N:0:ACAGTG Contig424883 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21215:49246_1:N:0:ACAGTG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16310:52813_1:N:0:ACAGTG Contig684436 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5532:53755_1:N:0:ACAGTG Contig50451 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8085:53903_1:N:0:ACAGTG Contig397456 107 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17140:54901_1:N:0:ACAGTG Contig24048 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4255:56730_1:N:0:ACAGTG Contig139048 1034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7369:57795_1:N:0:ACAGTG Contig518561 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14635:59226_1:N:0:ACAGTG Contig57995 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2380:59321_1:N:0:ACAGTG Contig139048 1034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9472:59285_1:N:0:ACAGTG Contig110194 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19735:60138_1:N:0:ACAGTG Contig651740 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7310:61830_1:N:0:ACAGTG Contig427164 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10847:62347_1:N:0:ACAGTG Contig247367 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14343:62353_1:N:0:ACAGTG Contig169966 658 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2560:63703_1:N:0:ACAGAG Contig406217 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20964:64888_1:N:0:ACAGTG Contig88233 3192 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18085:67983_1:N:0:ACAGTG Contig683764 5910 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3589:68114_1:N:0:ACAGTG Contig55033 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2810:68443_1:N:0:ACAGTG Contig627130 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1301:68528_1:N:0:ACAGTG Contig90454 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1094:69143_1:N:0:ACAGTG Contig504198 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16538:69189_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6334:69423_1:N:0:ACAGTG Contig298153 304 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5041:70336_1:N:0:ACAGTG Contig454829 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3099:71878_1:N:0:ACAGTG Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10958:72619_1:N:0:ACAGTG Contig239022 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14318:73030_1:N:0:ACAGTG Contig93734 7001 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11639:73849_1:N:0:ACAGTG Contig50057 6043 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16700:74201_1:N:0:ACAGTG Contig673557 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16007:74734_1:N:0:ACAGTG Contig446050 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19483:75408_1:N:0:ACAGTG Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20241:75804_1:N:0:ACAGTG Contig51318 26183 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8844:76585_1:N:0:ACAGTG Contig157537 889 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3685:77354_1:N:0:ACAGTG Contig118590 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4552:78212_1:N:0:ACAGTG Contig69145 14807 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5453:78090_1:N:0:ACAGTG Contig1816 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14313:78577_1:N:0:ACAGTG Contig139048 1034 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3205:80037_1:N:0:ACAGTG Contig405941 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6330:80651_1:N:0:ACAGTG Contig428079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14619:81069_1:N:0:ACAGTG Contig60519 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16576:81012_1:N:0:ACAGTG Contig18116 4012 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11627:81598_1:N:0:ACAGTG Contig205405 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15703:81952_1:N:0:ACAGTG Contig4326 6284 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13073:82288_1:N:0:ACAGTG Contig563516 111 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13569:82855_1:N:0:ACAGTG Contig78612 16838 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2562:84287_1:N:0:ACAGTG Contig262006 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10129:84281_1:N:0:ACAGTG Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6382:84592_1:N:0:ACAGTG Contig427679 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20268:84533_1:N:0:ACAGTG Contig572557 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19796:87790_1:N:0:ACAGTG Contig190979 801 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20914:90582_1:N:0:ACAGTG Contig350276 626 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12319:91344_1:N:0:ACAGTG Contig420605 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4580:91996_1:N:0:ACAGTG Contig601998 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8482:93959_1:N:0:ACAGTG Contig344283 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15444:93963_1:N:0:ACAGTG Contig113406 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11048:97238_1:N:0:ACAGTG Contig465253 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1672:98394_1:N:0:ACAGTG Contig628211 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2700:98880_1:N:0:ACAGTG Contig671433 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4008:98946_1:N:0:ACAGTG Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3705:99545_1:N:0:ACAGTG Contig383761 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4839:100656_1:N:0:ACAGTG Contig430323 250 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5419:100986_1:N:0:ACAGTG Contig201157 697 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14858:4552_1:N:0:ACAGTG Contig120188 4502 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7710:6086_1:N:0:ACAGTG Contig145807 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21192:7129_1:N:0:ACAGTG Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15915:7274_1:N:0:ACAGTG Contig165878 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13158:8604_1:N:0:ACAGTG Contig449208 485 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20298:10229_1:N:0:ACAGTG Contig232240 110 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9193:10629_1:N:0:ACAGTG Contig331309 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1829:11445_1:N:0:ACAGTG Contig491424 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12807:11772_1:N:0:ACAGTG Contig8381 3154 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17678:14552_1:N:0:ACAGTG Contig642394 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3255:15912_1:N:0:ACAGTG Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12825:16236_1:N:0:ACAGTG Contig446361 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9817:16398_1:N:0:ACAGTG Contig258426 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4975:17348_1:N:0:GCAGTG Contig488428 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16809:17459_1:N:0:ACAGTG Contig437255 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11419:18751_1:N:0:ACAGTG Contig86218 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13127:19237_1:N:0:ACAGTG Contig72112 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10598:20072_1:N:0:ACAGTG Contig268454 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3708:21042_1:N:0:ACAGTG Contig181207 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9538:21205_1:N:0:ACAGTG Contig57861 4311 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10930:21829_1:N:0:ACAGTG Contig362824 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18452:22062_1:N:0:ACAGTG Contig605207 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11475:22399_1:N:0:ACAGTG Contig119512 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11486:22429_1:N:0:ACAGTG Contig388700 277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13106:22317_1:N:0:ACAGTG Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14275:23278_1:N:0:ACAGTG Contig279888 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10943:23512_1:N:0:ACAGTG Contig617915 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17020:23616_1:N:0:ACAGTG Contig685604 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5296:23919_1:N:0:ACAGTG Contig56710 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19475:23751_1:N:0:ACAGTG Contig73932 3875 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1829:24710_1:N:0:ACAGTG Contig590614 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6551:26166_1:N:0:ACAGTG Contig475113 465 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10912:26296_1:N:0:ACAGTG Contig432572 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18371:26428_1:N:0:ACAGTG Contig334342 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21224:26765_1:N:0:ACAGTG Contig230947 1279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5231:27615_1:N:0:ACAGTG Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10995:28744_1:N:0:ACAGTG Contig628534 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5371:29091_1:N:0:ACAGTG Contig687836 688 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13406:29907_1:N:0:ACAGTG Contig256309 129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15228:30081_1:N:0:ACAGTG Contig671253 152 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20371:30902_1:N:0:ACAGTG Contig177637 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20973:32359_1:N:0:ACAGTG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20752:32579_1:N:0:ACAGTG Contig16985 787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3640:32890_1:N:0:ACAGTG Contig11158 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19432:32907_1:N:0:ACAGTG Contig320509 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4296:33209_1:N:0:ACAGTG Contig201297 1139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19953:33654_1:N:0:ACAGTG Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3944:33897_1:N:0:ACAGTG Contig84290 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16939:35971_1:N:0:ACAGTG Contig606433 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20942:38786_1:N:0:ACAGTG Contig260522 156 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21001:40859_1:N:0:AAAGTG Contig623193 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12373:42844_1:N:0:ACAGTG Contig443321 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3804:43055_1:N:0:ACAGTG Contig605190 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14676:43859_1:N:0:ACAGTG Contig159644 277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4327:45091_1:N:0:ACAGTG Contig542746 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12782:45047_1:N:0:ACAGTG Contig306668 177 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19140:46385_1:N:0:ACAGTG Contig563774 283 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19807:46921_1:N:0:ACAGTG Contig76256 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1096:48268_1:N:0:ACAGTG Contig422425 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7424:49914_1:N:0:ACAGTG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6153:51509_1:N:0:ACAGTG Contig188086 480 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12967:51629_1:N:0:ACAGTG Contig262006 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1858:52149_1:N:0:ACAGTG Contig111553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1228:52837_1:N:0:ACAGTG Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9011:52827_1:N:0:ACAGTG Contig625687 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12686:53596_1:N:0:ACAGTG Contig94407 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20625:53589_1:N:0:ACAGTG Contig548258 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3229:54357_1:N:0:ACAGTG Contig406336 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9089:59576_1:N:0:ACAGTG Contig516118 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12342:59612_1:N:0:ACAGTG Contig202265 1403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5145:59855_1:N:0:ACAGTG Contig465922 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15633:60628_1:N:0:ACAGAG Contig146402 1504 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12481:62478_1:N:0:ACAGTG Contig360647 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18352:62748_1:N:0:ACAGTG Contig292438 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18885:62847_1:N:0:ACAGTG Contig20608 4263 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17253:64797_1:N:0:ACAGTG Contig158704 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1126:66497_1:N:0:ACAGTG Contig395547 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12746:67154_1:N:0:ACAGTG Contig209919 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7580:68027_1:N:0:ACAGTG Contig206165 836 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2473:68794_1:N:0:ACAGTG Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13484:69551_1:N:0:ACAGTG Contig442920 2990 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17038:69881_1:N:0:ACAGTG Contig263581 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6997:73995_1:N:0:ACAGTG Contig67905 4362 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7166:74201_1:N:0:ACAGTG Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19639:75187_1:N:0:ACAGTG Contig552809 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7668:76348_1:N:0:ACAGTG Contig684280 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5484:76587_1:N:0:ACAGTG Contig212711 416 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8997:77316_1:N:0:ACAGTG Contig511646 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19958:78323_1:N:0:ACAGTG Contig351053 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12476:80127_1:N:0:ACAGTG Contig25120 1768 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8072:82607_1:N:0:ACAGTG Contig12869 112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20125:82524_1:N:0:ACAGTG Contig365760 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8382:84039_1:N:0:ACAGTG Contig583785 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19969:84104_1:N:0:ACAGTG Contig649471 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8270:84407_1:N:0:ACAGTG Contig548538 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5478:85408_1:N:0:ACAGTG Contig630038 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3024:86093_1:N:0:ACAGTG Contig221809 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9985:86472_1:N:0:ACAGTG Contig652400 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3648:86674_1:N:0:ACAGTG Contig179249 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10199:86673_1:N:0:ACAGTG Contig545950 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13768:86789_1:N:0:ACAGTG Contig174714 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1752:88719_1:N:0:ACAGTG Contig277106 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9815:89669_1:N:0:ACAGTG Contig290354 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10157:92824_1:N:0:ACAGTG Contig586278 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8486:93769_1:N:0:ACAGTG Contig9558 3890 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12967:96033_1:N:0:ACAGTG Contig609488 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1163:97530_1:N:0:ACAGTG Contig4164 13131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20521:97570_1:N:0:ACAGTG Contig297862 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3660:99295_1:N:0:ACAGTG Contig7695 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7748:100122_1:N:0:ACAGTG Contig24992 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16542:100042_1:N:0:ACAGTG Contig41295 7607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4702:2871_1:N:0:ACAGTG Contig662525 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4893:3294_1:N:0:ACAGTG Contig414714 382 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17549:5357_1:N:0:ACAGTG Contig565255 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1301:6907_1:N:0:ACAGTG Contig545436 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14793:8477_1:N:0:ACAGTG Contig435008 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18287:8555_1:N:0:ACAGTG Contig439156 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14760:10620_1:N:0:ACAGTG Contig265711 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7144:12972_1:N:0:ACAGTG Contig186017 425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7991:13309_1:N:0:ACAGTG Contig648802 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5288:13614_1:N:0:ACAGTG Contig620440 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15757:15374_1:N:0:ACAGTG Contig26049 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8309:16439_1:N:0:ACAGTG Contig549878 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14442:16609_1:N:0:ACAGTG Contig96780 3697 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17797:18708_1:N:0:ACAGTG Contig663988 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1991:19109_1:N:0:ACAGTG Contig96809 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15639:19012_1:N:0:ACAGTG Contig206873 1 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 789051 (78.91%) aligned 0 times 108684 (10.87%) aligned exactly 1 time 102265 (10.23%) aligned >1 times 21.09% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 789313 (78.93%) aligned 0 times 108330 (10.83%) aligned exactly 1 time 102357 (10.24%) aligned >1 times 21.07% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 366603 (36.66%) aligned 0 times 218752 (21.88%) aligned exactly 1 time 414645 (41.46%) aligned >1 times 63.34% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 367877 (36.79%) aligned 0 times 218752 (21.88%) aligned exactly 1 time 413371 (41.34%) aligned >1 times 63.21% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 5_ACAGTG_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 5_ACAGTG_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 399336 Mapping efficiency: 39.9% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2260603 Total methylated C's in CpG context: 86479 Total methylated C's in CHG context: 6442 Total methylated C's in CHH context: 121234 Total methylated C's in Unknown context: 33 Total unmethylated C's in CpG context: 224327 Total unmethylated C's in CHG context: 413986 Total unmethylated C's in CHH context: 1408135 Total unmethylated C's in Unknown context: 359 C methylated in CpG context: 27.8% C methylated in CHG context: 1.5% C methylated in CHH context: 7.9% C methylated in Unknown context (CN or CHN): 8.4% Bismark completed in 0d 1h 49m 10s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/6_GCCAAT_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 6_GCCAAT_L001_R1_001_trimmed.fq.gz to 6_GCCAAT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 6_GCCAAT_L001_R1_001_trimmed.fq.gz to 6_GCCAAT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 6_GCCAAT_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 6_GCCAAT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 6_GCCAAT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 6_GCCAAT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1108:2155_1:N:0:GCCAAT 0 Contig100605_CT_converted 1084 1 31M * 0 0 GGGTAGGTAGTGAAGGTTTGTGGTTGATAGG HGH@@GHCBFD@>FHJ?D@B9BDGHIGIIJI AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for CTreadGAgenome (reading in sequences from 6_GCCAAT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1108:2155_1:N:0:GCCAAT 16 Contig17751_GA_converted 5893 1 31M * 0 0 CCTATCAACCACAAACCTTCACTACCTACCC IJIIGIHGDB9B@D?JHF>@DFBCHG@@HGH AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadCTgenome (reading in sequences from 6_GCCAAT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1108:2155_1:N:0:GCCAAT 4 * 0 0 * * 0 0 AAATAAATAATAAAAATTTATAATTAATAAA HGH@@GHCBFD@>FHJ?D@B9BDGHIGIIJI YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 6_GCCAAT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1108:2155_1:N:0:GCCAAT 4 * 0 0 * * 0 0 AAATAAATAATAAAAATTTATAATTAATAAA HGH@@GHCBFD@>FHJ?D@B9BDGHIGIIJI YT:Z:UU >>> Writing bisulfite mapping results to 6_GCCAAT_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/6_GCCAAT_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20910:3652_1:N:0:GCCAAT Contig321455 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7366:3829_1:N:0:GCCAAT Contig48760 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13575:10970_1:N:0:GCCAAT Contig325568 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16921:11616_1:N:0:GCCAAT Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1484:12264_1:N:0:GCCAAT Contig205529 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4007:13049_1:N:0:GCCAAT Contig404714 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4722:14401_1:N:0:GCCAAT Contig306001 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8536:15354_1:N:0:GCAAAT Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9067:16897_1:N:0:GCCAAT Contig594240 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8518:17666_1:N:0:GCCAAT Contig489838 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11115:18666_1:N:0:GCCAAT Contig104687 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9699:18983_1:N:0:GCCAAT Contig290221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5819:20826_1:N:0:GCCAAT Contig666972 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6545:23750_1:N:0:GCCAAT Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8368:23846_1:N:0:GCCAAT Contig560873 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4063:24155_1:N:0:GCCAAT Contig596614 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2615:27381_1:N:0:GCCAAT Contig471779 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15028:28322_1:N:0:GCCAAT Contig441943 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17130:30318_1:N:0:GCCAAT Contig153437 2313 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7575:30629_1:N:0:GCCAAT Contig348855 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6302:33316_1:N:0:GCCAAT Contig227618 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11892:34218_1:N:0:GCCAAT Contig117874 1299 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20824:35609_1:N:0:GCCAAA Contig292125 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17463:36387_1:N:0:GCCAAT Contig539076 170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20823:36519_1:N:0:GCCAAT Contig479819 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19531:38875_1:N:0:GCCAAT Contig16758 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10765:39135_1:N:0:GCCAAT Contig543695 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20884:39379_1:N:0:GCCAAT Contig421208 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12623:39596_1:N:0:GCCAAT Contig142831 855 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9324:44076_1:N:0:GCCAAT Contig513901 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2786:45903_1:N:0:GCCAAT Contig682588 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18636:47200_1:N:0:GCCAAT Contig297153 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11801:50081_1:N:0:GCCAAT Contig420186 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4924:50384_1:N:0:GCCAAT Contig655851 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1395:52083_1:N:0:GCCAAT Contig47632 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7116:52456_1:N:0:GGCAAT Contig406952 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14024:53804_1:N:0:GCCAAT Contig331910 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5390:54267_1:N:0:GCCAAT Contig14458 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19691:56568_1:N:0:GCCAAT Contig203423 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14000:57494_1:N:0:GCCAAT Contig48874 143 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20506:59716_1:N:0:GCCAAT Contig22767 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1460:60041_1:N:0:GCCAAT Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16864:60125_1:N:0:GCCAAT Contig539130 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3445:61116_1:N:0:GCCAAT Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7699:63478_1:N:0:GCCAAT Contig243113 232 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3587:67526_1:N:0:GCCAAT Contig433808 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21110:69896_1:N:0:GCCAAT Contig339022 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12734:71587_1:N:0:GCCAAT Contig575169 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10197:72442_1:N:0:GCCAAT Contig23366 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6871:74113_1:N:0:GCCAAT Contig159433 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3678:76115_1:N:0:GCCAAT Contig16448 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4626:76976_1:N:0:GCCAAT Contig348324 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14449:82888_1:N:0:GCCAAT Contig443794 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3621:83199_1:N:0:GCCAAT Contig282460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4882:83490_1:N:0:GCCAAT Contig471935 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14918:87467_1:N:0:GCCAAT Contig360581 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21251:88226_1:N:0:GCCAAT Contig620233 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11255:88757_1:N:0:GCCAAT Contig277892 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17111:94571_1:N:0:GCCAAT Contig54998 34996 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15692:97780_1:N:0:GCCAAT Contig360690 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14036:98817_1:N:0:GCCAAT Contig248132 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10525:99430_1:N:0:GCCAAT Contig319506 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17559:100509_1:N:0:GCCAAT Contig657879 110 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5608:100810_1:N:0:GCCAAT Contig54772 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3635:2764_1:N:0:GCCAAT Contig212711 416 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16503:3659_1:N:0:GCCAAT Contig667680 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21074:3522_1:N:0:GCCAAT Contig692473 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1548:4060_1:N:0:GCCAAT Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7705:4386_1:N:0:GCCAAT Contig2942 6988 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18356:5560_1:N:0:GCCAAT Contig161878 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19459:5704_1:N:0:GCCAAT Contig13062 214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11962:5812_1:N:0:GCCAAT Contig689148 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19067:7388_1:N:0:GCCAAT Contig384852 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2735:7633_1:N:0:GCCAAT Contig262458 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10118:8081_1:N:0:GCCAAT Contig432445 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8505:9038_1:N:0:GCCAAT Contig39416 2223 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14063:9039_1:N:0:GCCAAT Contig252927 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12474:12649_1:N:0:GCCAAT Contig435384 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13509:14564_1:N:0:GCCAAT Contig12009 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17567:17346_1:N:0:GCCAAT Contig416276 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19949:18387_1:N:0:GCCAAT Contig686572 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1448:19339_1:N:0:GCCAAT Contig36268 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8827:19577_1:N:0:GCCAAT Contig386738 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16540:20106_1:N:0:GCCAAT Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15195:21951_1:N:0:GCCAAT Contig60837 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20225:26107_1:N:0:GCCAAT Contig527507 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7811:26558_1:N:0:GCCAAT Contig315354 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17967:26932_1:N:0:GCCAAT Contig422809 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3893:28124_1:N:0:GCCAAT Contig75355 2656 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4887:29385_1:N:0:GCCAAT Contig622710 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13045:29553_1:N:0:GCCAAT Contig316580 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11954:32178_1:N:0:GCCAAT Contig642143 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13714:32979_1:N:0:GCCAAT Contig384784 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5006:35774_1:N:0:GCCAAT Contig688325 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10267:35879_1:N:0:GCCAAT Contig218122 395 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9763:36872_1:N:0:GCCAAT Contig24547 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4480:37715_1:N:0:GCCAAT Contig61589 13319 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7152:38931_1:N:0:GCCAAT Contig182820 2403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17381:39555_1:N:0:GCCAAT Contig34610 29594 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1390:42201_1:N:0:GCCAAT Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10525:42377_1:N:0:GCCAAT Contig34422 11397 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14866:42517_1:N:0:GCCAAT Contig17057 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4591:45443_1:N:0:GCCAAT Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9460:45623_1:N:0:GCCAAT Contig183189 607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9475:45669_1:N:0:GCCAAT Contig183189 607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1635:46038_1:N:0:GCCAAT Contig147589 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10955:46591_1:N:0:GCCAAT Contig515784 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5848:49362_1:N:0:GCCAAT Contig298588 145 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9230:51630_1:N:0:GCCAAT Contig409377 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2616:53196_1:N:0:GCCAAT Contig676640 298 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11345:54323_1:N:0:GCCAAT Contig221488 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2702:54597_1:N:0:GCCAAT Contig305059 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5046:54759_1:N:0:GCCAAT Contig575169 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11328:57597_1:N:0:GCCAAT Contig30765 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16809:58095_1:N:0:GCCAAT Contig302723 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9193:58264_1:N:0:GCCAAT Contig604854 816 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12493:60817_1:N:0:GCCAAT Contig384272 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2493:61902_1:N:0:GCCAAT Contig100874 20152 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14397:63022_1:N:0:GCCAAT Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16278:63176_1:N:0:GCCAAT Contig34929 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6520:63380_1:N:0:GCCAAT Contig633960 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12255:64337_1:N:0:GCCAAT Contig580405 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17400:64307_1:N:0:GCCAAT Contig680104 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13586:66574_1:N:0:GCCAAT Contig544677 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13922:68640_1:N:0:GCCAAT Contig435263 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8351:68890_1:N:0:GCCAAT Contig311811 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9273:70231_1:N:0:GCCAAT Contig192302 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14788:70310_1:N:0:GCCAAT Contig161521 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7930:71473_1:N:0:GCCAAT Contig447798 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19159:74425_1:N:0:GCCAAT Contig54345 10149 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20021:74400_1:N:0:GCCAAT Contig73251 13667 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19636:75092_1:N:0:GCCAAT Contig565962 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11606:75970_1:N:0:GCCAAT Contig203423 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14227:76820_1:N:0:GCCAAT Contig551546 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12077:77237_1:N:0:GCCAAT Contig660309 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20911:78358_1:N:0:GCCAAT Contig172087 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5448:79809_1:N:0:GCCAAT Contig156439 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5776:79786_1:N:0:GCCAAT Contig634722 307 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9291:81634_1:N:0:GCCAAT Contig49846 6955 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14628:81622_1:N:0:GCCAAT Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7577:82759_1:N:0:GCCAAT Contig244253 190 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14778:83083_1:N:0:GCCAAT Contig194937 454 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6562:85219_1:N:0:GCCAAT Contig554736 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2875:88049_1:N:0:GCCAAT Contig50844 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14478:88408_1:N:0:GCCAAT Contig462768 141 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14009:89240_1:N:0:GCCAAT Contig270296 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18823:89337_1:N:0:GCCAAT Contig349057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20295:89516_1:N:0:GCCAAT Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19071:90300_1:N:0:GCCAAT Contig500457 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8898:91644_1:N:0:GCCAAT Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17171:91704_1:N:0:GCCAAT Contig212711 416 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13862:93811_1:N:0:GCCAAT Contig102838 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4024:94124_1:N:0:GCCAAT Contig177197 841 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18809:96437_1:N:0:GCCAAT Contig54452 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20786:96573_1:N:0:GCCAAT Contig40020 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3919:97468_1:N:0:GCCAAT Contig262735 4721 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11463:97428_1:N:0:GCCAAT Contig691138 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12182:98308_1:N:0:GCCAAT Contig299699 154 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6966:99308_1:N:0:GCCAAT Contig558747 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15897:100122_1:N:0:GCCAAT Contig206780 430 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18393:101064_1:N:0:GCCAAT Contig148677 1399 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1388:6026_1:N:0:GCCAAT Contig123294 818 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18172:7596_1:N:0:GCCAAT Contig640164 279 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7194:7861_1:N:0:GCCAAT Contig304376 10127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17212:8434_1:N:0:GCCAAT Contig14615 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10111:8520_1:N:0:GCCAAT Contig251907 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16687:9658_1:N:0:GCCAAT Contig425033 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20447:10896_1:N:0:GCCAAT Contig539646 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7446:11076_1:N:0:GCCAAT Contig182141 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16284:11782_1:N:0:GCCAAT Contig412064 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17982:14411_1:N:0:GCCAAT Contig17091 74841 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19407:14756_1:N:0:GCCAAT Contig431614 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15031:16567_1:N:0:GCCAAT Contig322010 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1694:16835_1:N:0:GCCAAT Contig24949 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16767:18298_1:N:0:GCCAAT Contig39499 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15342:21089_1:N:0:GCCAAT Contig3979 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5021:23715_1:N:0:GCCAAT Contig322052 401 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6614:24668_1:N:0:GCCAAT Contig277106 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20968:24979_1:N:0:GCCAAT Contig663736 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13475:27621_1:N:0:GCCAAT Contig361755 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19854:28417_1:N:0:GCCAAT Contig71779 14343 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5387:31433_1:N:0:GCCAAT Contig390568 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19037:32119_1:N:0:GCCAAT Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13342:32890_1:N:0:GCCAAT Contig79708 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7594:33796_1:N:0:GCCAAT Contig543724 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7577:33800_1:N:0:GCCAAT Contig543724 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5781:34845_1:N:0:GCCAAT Contig15775 360 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12837:35466_1:N:0:GCCAAT Contig237709 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9334:35538_1:N:0:GCCAAT Contig236392 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11545:36087_1:N:0:GCCAAT Contig312365 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14793:36761_1:N:0:GCCAAT Contig687005 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19142:37410_1:N:0:GCCAAT Contig141630 2067 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14494:38887_1:N:0:GCCAAT Contig310888 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7233:40452_1:N:0:GCCAAT Contig31430 23080 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12960:42659_1:N:0:GCCAAT Contig636632 224 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13063:43062_1:N:0:GCCAAT Contig202913 765 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5393:43838_1:N:0:GCCAAT Contig465569 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9557:44072_1:N:0:GCCAAT Contig394203 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11632:45294_1:N:0:GCCAAT Contig158700 542 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10420:46864_1:N:0:GCCAAT Contig604651 162 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1889:48369_1:N:0:GCCAAT Contig4463 2756 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14968:48981_1:N:0:GCCAAT Contig294152 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13511:49955_1:N:0:GCCAAT Contig262772 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10414:50155_1:N:0:GCCAAT Contig487961 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17069:52531_1:N:0:GCCAAT Contig692013 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5135:53316_1:N:0:GCCAAT Contig6141 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7075:55417_1:N:0:GCCAAT Contig493405 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9418:55577_1:N:0:GCCAAT Contig569027 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12666:58317_1:N:0:GCCAAT Contig206982 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11177:59168_1:N:0:GCCAAT Contig316611 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12795:59346_1:N:0:GCCAAT Contig108449 1169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18188:63776_1:N:0:GCCAAT Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2862:64301_1:N:0:GCCAAT Contig335318 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7835:64793_1:N:0:GCCAAT Contig385709 142 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4391:65339_1:N:0:GCCAAT Contig59947 3804 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4453:65751_1:N:0:GCCAAT Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11343:66080_1:N:0:GCCAAT Contig282075 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18721:69895_1:N:0:GCCAAT Contig292519 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20756:69822_1:N:0:GCCAAT Contig229944 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6488:70417_1:N:0:GCCAAT Contig119718 872 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11443:71924_1:N:0:GCCAAT Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4145:72284_1:N:0:GCCAAT Contig441029 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16669:73456_1:N:0:GCCAAT Contig684773 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9020:75070_1:N:0:GCCAAA Contig137233 763 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11919:76859_1:N:0:GCCAAT Contig614247 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5132:77603_1:N:0:GCCAAT Contig220845 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17466:77699_1:N:0:GCCAAT Contig306340 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4650:78241_1:N:0:GCCAAT Contig213739 1425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15027:78037_1:N:0:GCCAAT Contig116263 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6101:78609_1:N:0:GCCAAT Contig10438 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12081:79355_1:N:0:GCCAAT Contig82612 8549 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14694:82840_1:N:0:GCCAAT Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20910:87199_1:N:0:GCCAAT Contig107259 4042 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3002:88305_1:N:0:GCCAAT Contig64084 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14615:89173_1:N:0:GCCAAT Contig539646 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5674:90245_1:N:0:GCCAAT Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12204:90482_1:N:0:GCCAAT Contig339022 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18141:90702_1:N:0:GCCAAT Contig449725 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11057:91764_1:N:0:GCCAAT Contig20750 851 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9187:93891_1:N:0:GCCAAT Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17921:93937_1:N:0:GCCAAT Contig695026 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19689:94068_1:N:0:GCCAAT Contig59209 1649 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9616:95293_1:N:0:GCCAAT Contig79534 1873 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9639:96143_1:N:0:GCCAAT Contig237538 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18944:97960_1:N:0:GCCAAT Contig380592 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4714:100239_1:N:0:GCCAAA Contig87958 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8080:100432_1:N:0:GCCAAT Contig922 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13666:100601_1:N:0:GCCAAT Contig170782 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8499:100986_1:N:0:GCCAAT Contig638533 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19658:3192_1:N:0:GCCAAT Contig96166 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14210:3257_1:N:0:GCCCAT Contig276379 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7399:4628_1:N:0:GCCAAT Contig348855 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12809:5690_1:N:0:GCCAAT Contig460831 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9835:6091_1:N:0:GCCAAT Contig17057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2824:6339_1:N:0:GCCAAT Contig676413 150 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20196:6308_1:N:0:GCCAAT Contig150475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3248:7540_1:N:0:GCCAAT Contig106279 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11228:8241_1:N:0:GCCAAT Contig451535 155 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5808:11250_1:N:0:GCCAAT Contig102113 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8355:11743_1:N:0:GCCAAT Contig145743 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7208:12048_1:N:0:GCCAAT Contig279960 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20390:12271_1:N:0:GCCAAT Contig265086 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15629:12703_1:N:0:GCCAAT Contig313039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4535:14010_1:N:0:GCCAAT Contig34929 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8970:14854_1:N:0:GCCAAT Contig594031 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7197:15717_1:N:0:GCCAAT Contig534404 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3271:16442_1:N:0:GCCAAT Contig108449 1169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3559:18393_1:N:0:GCCAAT Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19909:18640_1:N:0:GCCAAT Contig560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10068:19336_1:N:0:GCCAAT Contig357735 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10064:19371_1:N:0:GCCAAT Contig357735 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14904:20676_1:N:0:GCCAAT Contig3608 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3924:21718_1:N:0:GCCAAT Contig517546 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19488:22700_1:N:0:GCCAAT Contig27302 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8080:23078_1:N:0:GCCAAT Contig23644 1606 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2389:23671_1:N:0:GCCAAT Contig299323 152 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3832:24844_1:N:0:GCCAAT Contig440951 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5694:25149_1:N:0:GCCAAT Contig535027 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15025:25189_1:N:0:GCCAAT Contig209852 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9211:25670_1:N:0:GCCAAT Contig656429 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10522:26070_1:N:0:GCCAAT Contig302021 120 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6485:27922_1:N:0:GCCAAT Contig344909 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4848:28821_1:N:0:GCCAAT Contig248804 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13308:29670_1:N:0:GCCAAT Contig12829 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11672:32024_1:N:0:GCCAAT Contig99896 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16150:32233_1:N:0:GCCAAT Contig35251 28227 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6941:32520_1:N:0:GCCAAT Contig370029 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13303:33674_1:N:0:GCCAAT Contig140751 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16843:34544_1:N:0:GCCAAT Contig134998 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21145:36218_1:N:0:GCCAAT Contig118046 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17599:36423_1:N:0:GCCAAT Contig573470 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12045:39184_1:N:0:GCCAAT Contig583483 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13065:39191_1:N:0:GCCAAT Contig151756 694 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4421:39800_1:N:0:GCCAAT Contig218980 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5603:41542_1:N:0:GCCAAT Contig469239 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10772:41508_1:N:0:GCCAAT Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3364:42361_1:N:0:GCCAAT Contig60735 11993 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18696:42761_1:N:0:GCCAAT Contig69535 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13252:43054_1:N:0:GCCAAT Contig595941 155 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12799:44197_1:N:0:GCCAAT Contig303881 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13836:44280_1:N:0:GCCAAT Contig104002 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15707:44418_1:N:0:GCCAAT Contig114813 1105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6974:44618_1:N:0:GCCAAT Contig234905 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16021:45610_1:N:0:GCCAAT Contig566129 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10604:45876_1:N:0:GCCAAT Contig243162 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13531:46632_1:N:0:GCCAAT Contig41224 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2768:47453_1:N:0:GCCAAT Contig96730 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16475:47318_1:N:0:GCCAAT Contig190628 701 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19351:48193_1:N:0:GCCAAT Contig170815 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15018:49358_1:N:0:GCCAAT Contig180847 669 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6055:49880_1:N:0:GCCAAT Contig92353 9048 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7607:49777_1:N:0:GCCAAT Contig345745 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17149:50366_1:N:0:GCCAAT Contig670362 262 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20732:50691_1:N:0:GCCAAT Contig449261 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8029:52662_1:N:0:GCCAAT Contig16829 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7089:52829_1:N:0:GCCAAT Contig301781 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8372:54694_1:N:0:GCCAAT Contig563901 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10991:55342_1:N:0:GCCAAT Contig437900 223 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17787:55429_1:N:0:GCCAAT Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15802:55731_1:N:0:GCCAAT Contig642623 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13725:56977_1:N:0:GCCAAT Contig446216 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18453:57549_1:N:0:GCCAAT Contig72902 7665 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12458:57874_1:N:0:GCCAAT Contig415898 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4419:59998_1:N:0:GCCAAT Contig222411 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19223:60859_1:N:0:GCCAAT Contig689060 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12683:61170_1:N:0:GCCAAT Contig342719 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10406:63402_1:N:0:GCCAAT Contig386858 189 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18032:63582_1:N:0:GCCAAT Contig538229 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2956:63880_1:N:0:GCCAAT Contig35214 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2410:64705_1:N:0:GCCAAT Contig271592 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10241:64564_1:N:0:GCCAAT Contig17057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8047:65056_1:N:0:GCCAAT Contig397959 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17212:65861_1:N:0:GCCAAT Contig98002 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3577:66284_1:N:0:GCCAAT Contig688934 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13021:67722_1:N:0:GCCAAT Contig61703 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10890:68494_1:N:0:GCCAAT Contig625647 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3110:69517_1:N:0:GCCAAT Contig563330 401 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6817:69580_1:N:0:GCCAAT Contig616588 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3206:72016_1:N:0:GCCAAT Contig2476 19388 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17143:76527_1:N:0:GCCAAT Contig634792 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13066:76777_1:N:0:GCCAAT Contig424300 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3013:77801_1:N:0:GCCAAT Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4894:77917_1:N:0:GCCAAT Contig233571 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17590:78642_1:N:0:GCCAAT Contig318779 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11679:80633_1:N:0:GCCAAT Contig617279 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14660:80877_1:N:0:GCCAAT Contig387100 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13921:85210_1:N:0:GCCAAT Contig457780 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7839:85478_1:N:0:GCCAAT Contig82714 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6218:86971_1:N:0:GCCAAT Contig12009 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9808:87671_1:N:0:GCCAAT Contig160486 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19816:87977_1:N:0:GCCAAT Contig143583 4040 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9553:88636_1:N:0:GCCAAT Contig448202 133 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1838:89571_1:N:0:GCCAAT Contig205815 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21148:89787_1:N:0:GCCAAT Contig183189 607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12513:92493_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19335:93236_1:N:0:GCCAAT Contig631585 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5286:93711_1:N:0:GCCAAT Contig391594 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15293:93739_1:N:0:GCCAAT Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19202:94325_1:N:0:GCCAAT Contig338919 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17447:95347_1:N:0:GCCAAT Contig129204 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16545:97173_1:N:0:GCCAAT Contig407304 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20197:98870_1:N:0:GCCAAT Contig209685 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11734:99634_1:N:0:GCCAAT Contig213739 1425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7723:100708_1:N:0:GCCAAT Contig120097 3284 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11427:100909_1:N:0:GCCAAT Contig685629 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7653:2170_1:N:0:GCCAAT Contig593612 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17991:2447_1:N:0:GCCAAT Contig396548 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4657:3031_1:N:0:GCCAAT Contig310027 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19922:3921_1:N:0:GCCAAT Contig459160 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16158:5749_1:N:0:GCCAAT Contig22523 25232 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8871:7770_1:N:0:GCCAAT Contig684990 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2615:8259_1:N:0:GCCAAT Contig446390 194 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2169:10117_1:N:0:GCCAAT Contig281607 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18943:10197_1:N:0:GCCAAT Contig474502 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1769:10937_1:N:0:GCCAAT Contig323383 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10914:13106_1:N:0:GCCAAT Contig175238 982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7347:13863_1:N:0:GCCAAT Contig33199 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16853:14770_1:N:0:GCCAAT Contig206982 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18051:14854_1:N:0:GCCAAT Contig36268 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19772:17119_1:N:0:GCCAAT Contig31360 38607 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17994:17793_1:N:0:GCCAAT Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3744:18484_1:N:0:GCCAAT Contig8757 740 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16815:19605_1:N:0:GCCAAT Contig72837 22547 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7300:22239_1:N:0:GCCAAT Contig104947 4077 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7896:22099_1:N:0:GCCAAT Contig381956 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14909:22826_1:N:0:GCCAAT Contig661072 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16578:22889_1:N:0:GCCAAT Contig12331 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16266:25591_1:N:0:GCCAAT Contig473948 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17974:25711_1:N:0:GCCAAT Contig615184 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10263:26611_1:N:0:GCCAAT Contig178294 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17051:27315_1:N:0:GCCAAT Contig79227 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20100:28575_1:N:0:GCCAAT Contig268993 192 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8557:28793_1:N:0:GCCAAT Contig687927 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10134:28766_1:N:0:GCCAAT Contig305996 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13141:29032_1:N:0:GCCAAT Contig502181 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16047:29582_1:N:0:GCCAAT Contig382531 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15658:29877_1:N:0:GCCAAT Contig9848 760 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18019:30497_1:N:0:GCCAAT Contig91220 7579 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20643:31127_1:N:0:GCCAAT Contig158704 1090 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13977:32654_1:N:0:GCCAAT Contig186444 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8367:34466_1:N:0:GCCAAT Contig161718 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14821:35953_1:N:0:GCCAAT Contig404460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7928:36910_1:N:0:GCCAAT Contig358352 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15419:37230_1:N:0:GCCAAT Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9444:37565_1:N:0:GCCAAT Contig312365 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13709:39185_1:N:0:GCCAAT Contig174260 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5599:40406_1:N:0:GCCAAT Contig293379 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3529:41280_1:N:0:GCCAAT Contig282460 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7102:42663_1:N:0:GCCAAT Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2536:44253_1:N:0:GCCAAT Contig17057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4527:44467_1:N:0:GCCAAT Contig379249 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11362:45700_1:N:0:GCCAAT Contig319929 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2764:47588_1:N:0:GCCAAT Contig224276 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5110:47940_1:N:0:GCCAAT Contig443584 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12357:48859_1:N:0:GCCAAT Contig453114 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4332:49993_1:N:0:GCCAAT Contig642394 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2889:51637_1:N:0:GCCAAT Contig425032 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20359:52007_1:N:0:GCCAAT Contig401396 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7725:52692_1:N:0:GCCAAT Contig27302 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18975:53548_1:N:0:GCCAAT Contig403876 200 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6207:54085_1:N:0:GCCAAT Contig396585 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3157:54439_1:N:0:GCCAAT Contig385479 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21196:54744_1:N:0:GCCAAT Contig299700 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16455:57334_1:N:0:GCCAAT Contig260781 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19904:57611_1:N:0:GCCAAT Contig126521 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3855:58686_1:N:0:GCCAAT Contig357508 133 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3819:58868_1:N:0:GCCAAT Contig263078 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6937:62975_1:N:0:GCCAAT Contig385412 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8268:64805_1:N:0:GCCAAT Contig652642 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4834:65316_1:N:0:GCCAAT Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6960:66385_1:N:0:GCCAAT Contig96190 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2223:66522_1:N:0:GCCAAT Contig430738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17141:67607_1:N:0:GCCAAT Contig388838 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14136:68622_1:N:0:GCCAAT Contig437042 639 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5247:68886_1:N:0:GCCAAT Contig356374 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5122:69158_1:N:0:GCCAAT Contig43685 5339 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7389:69856_1:N:0:GCCAAT Contig634015 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10037:69872_1:N:0:GCCAAT Contig311609 158 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18443:70004_1:N:0:GCCAAT Contig342405 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8621:70722_1:N:0:GCCAAT Contig465792 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18745:70792_1:N:0:GCCAAT Contig143329 2210 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9836:71371_1:N:0:GCCAAA Contig310027 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7420:71660_1:N:0:GCCAAT Contig108449 1170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3575:73336_1:N:0:GCCAAT Contig346524 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6181:75039_1:N:0:GCCAAT Contig260781 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16256:75395_1:N:0:GCCAAT Contig401906 136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7962:75934_1:N:0:GCCAAT Contig556038 407 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7002:77533_1:N:0:GCCAAT Contig681182 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21088:77730_1:N:0:GCCAAT Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7684:78110_1:N:0:GCCAAT Contig166447 712 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17059:80651_1:N:0:GCCAAT Contig306375 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6019:83178_1:N:0:GCCAAT Contig303620 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5094:83500_1:N:0:GCCAAT Contig489540 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3169:88017_1:N:0:GCCAAT Contig201319 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7295:88423_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16822:90287_1:N:0:GCCAAA Contig218635 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3138:91098_1:N:0:GCCAAT Contig385474 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21287:93001_1:N:0:GCCAAT Contig244102 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12397:93836_1:N:0:GCCAAT Contig303267 201 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8879:94418_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1741:95676_1:N:0:GCCAAT Contig403649 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6498:95886_1:N:0:GCCAAT Contig238624 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16674:96972_1:N:0:GCCAAT Contig134676 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20837:96872_1:N:0:GCCAAT Contig41355 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17839:97130_1:N:0:GCCAAT Contig20710 16733 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8409:97430_1:N:0:GCCAAT Contig665817 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15062:98432_1:N:0:GCCAAT Contig624216 276 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14972:98695_1:N:0:GCCAAT Contig163652 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14685:100560_1:N:0:GCCAAT Contig468130 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9999:4453_1:N:0:GCCAAT Contig608543 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5204:5215_1:N:0:GCCAAT Contig123371 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7773:5374_1:N:0:GCCAAT Contig660793 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4806:7702_1:N:0:GCCAAT Contig512283 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2174:8247_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13438:9414_1:N:0:GCCAAT Contig670368 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14931:9515_1:N:0:GCCAAT Contig163614 436 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19902:11058_1:N:0:GCCAAT Contig377889 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14639:11455_1:N:0:GCCAAT Contig56610 112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15620:13060_1:N:0:GCCAAT Contig7453 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19857:13680_1:N:0:GCCAAT Contig1284 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1367:14403_1:N:0:GCCAAT Contig438548 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9828:14628_1:N:0:GCCAAT Contig59209 1646 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1199:15625_1:N:0:GCCAAT Contig57995 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19775:16882_1:N:0:GCCAAT Contig519356 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14061:19204_1:N:0:GCCAAT Contig492468 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8378:20115_1:N:0:GCCAAT Contig397880 314 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4766:20910_1:N:0:GCCAAT Contig689588 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1763:21420_1:N:0:GCCAAT Contig66645 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8372:21612_1:N:0:GCCAAT Contig352929 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4461:24304_1:N:0:GCCAAT Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19058:26453_1:N:0:GCCAAT Contig477446 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10118:26911_1:N:0:GCCAAT Contig553159 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9888:27239_1:N:0:GCCAAT Contig687471 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9461:27646_1:N:0:GCCAAT Contig26196 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15891:30137_1:N:0:GCCAAT Contig631463 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2134:30617_1:N:0:GCCAAT Contig661304 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19446:33656_1:N:0:GCCAAT Contig346607 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11495:33893_1:N:0:GCCAAT Contig528109 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20648:36011_1:N:0:GCCAAT Contig502208 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12873:37134_1:N:0:GCCAAT Contig525667 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16673:37458_1:N:0:GCCAAT Contig671415 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2851:38472_1:N:0:GCCAAT Contig500457 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17013:38328_1:N:0:GCCAAT Contig695085 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14299:39155_1:N:0:GCCAAT Contig228419 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3128:40482_1:N:0:GCCAAT Contig655120 263 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6292:41034_1:N:0:GCCAAT Contig601288 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17430:41777_1:N:0:GCCAAT Contig568420 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18342:43043_1:N:0:GCCAAT Contig108449 1170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12687:44043_1:N:0:GCCAAT Contig408104 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20364:44130_1:N:0:GCCAAT Contig62730 10859 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2122:44549_1:N:0:GCCAAT Contig80624 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4023:45169_1:N:0:GCCAAT Contig219535 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17994:45232_1:N:0:GCCAAT Contig612911 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20556:45044_1:N:0:GCCAAT Contig160668 3020 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3787:47229_1:N:0:GCCAAT Contig286113 1755 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16469:47066_1:N:0:GCCAAT Contig655794 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14992:49014_1:N:0:GCCAAT Contig373633 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15388:49177_1:N:0:GCCAAT Contig152627 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7344:49396_1:N:0:GCCAAT Contig98714 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16734:49718_1:N:0:GCCAAT Contig30661 1226 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4816:50004_1:N:0:GCCAAT Contig63990 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7557:52951_1:N:0:GCCAAT Contig487890 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1444:53458_1:N:0:GCCAAT Contig37347 4095 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2739:53423_1:N:0:GCCAAT Contig580195 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15279:53752_1:N:0:GCCAAT Contig296428 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4462:54088_1:N:0:GCCAAT Contig204100 433 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13458:54228_1:N:0:GCCAAT Contig135893 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8793:54907_1:N:0:GCCAAT Contig68212 13491 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15639:56627_1:N:0:GCCAAT Contig191365 634 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16810:58688_1:N:0:GCCAAT Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1527:58791_1:N:0:GCCAAT Contig100388 1699 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4742:60250_1:N:0:GCCAAT Contig391113 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4080:61336_1:N:0:GCCAAT Contig392275 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10652:62816_1:N:0:GCCAAT Contig64465 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18258:63896_1:N:0:GCCAAT Contig191551 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15002:65078_1:N:0:GCCAAT Contig102838 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7755:66242_1:N:0:GCCAAT Contig501373 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3184:66415_1:N:0:GCCAAT Contig637086 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3959:67260_1:N:0:GCCAAT Contig480000 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5591:67591_1:N:0:GCCAAT Contig516416 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5268:68213_1:N:0:GCCAAT Contig368416 131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3906:69341_1:N:0:GCCAAT Contig392672 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17307:69273_1:N:0:GCCAAT Contig211103 761 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6557:69846_1:N:0:GCCAAT Contig475113 463 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4677:70730_1:N:0:GCCAAA Contig214221 566 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15315:70979_1:N:0:GCCAAT Contig363413 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7622:71068_1:N:0:GCCAAT Contig563199 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12711:71847_1:N:0:GCCAAT Contig46987 7839 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15320:74546_1:N:0:GCCAAT Contig633833 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5614:76678_1:N:0:GCCAAT Contig75027 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9802:76999_1:N:0:GCCAAT Contig432261 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16049:80563_1:N:0:GCCAAT Contig10870 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2864:81357_1:N:0:GCCAAT Contig2853 8527 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6205:81273_1:N:0:GCCAAT Contig33023 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20844:81492_1:N:0:GCCAAT Contig175015 756 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8135:83151_1:N:0:GCCAAT Contig68472 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7225:85679_1:N:0:GCCAAT Contig226780 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8962:85614_1:N:0:GCCAAT Contig436363 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11670:86445_1:N:0:GCCAAT Contig380364 136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18255:87544_1:N:0:GCCAAT Contig133776 3443 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17674:88170_1:N:0:GCCAAT Contig187721 938 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1128:88685_1:N:0:GCCAAT Contig597461 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3760:89228_1:N:0:GCCAAT Contig212711 416 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17198:90329_1:N:0:GCCAAT Contig185711 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9226:90651_1:N:0:GCCAAT Contig151534 1985 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17697:90597_1:N:0:GCCAAT Contig171908 677 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20452:91565_1:N:0:GCCAAT Contig326210 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20977:93392_1:N:0:GCCAAT Contig390934 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7235:93902_1:N:0:GCCAAT Contig322890 225 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4763:96335_1:N:0:GCCAAT Contig431709 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12367:97398_1:N:0:GCCAAT Contig285569 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12368:97416_1:N:0:GCCAAT Contig285569 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4379:97542_1:N:0:GCCAAT Contig589348 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7443:97512_1:N:0:GCCAAT Contig597461 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2275:99089_1:N:0:GCCAAT Contig34958 19723 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6924:100138_1:N:0:GCCAAT Contig373669 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8924:100174_1:N:0:GCCAAT Contig294980 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10615:100758_1:N:0:GCCAAT Contig642394 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6682:3208_1:N:0:GCCAAT Contig11638 2412 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20621:3152_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9821:4230_1:N:0:GCCAAT Contig209389 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2182:5813_1:N:0:GCCAAT Contig380926 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2911:10284_1:N:0:GCCAAT Contig30330 9740 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12279:11664_1:N:0:GCCAAT Contig608213 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18523:12336_1:N:0:GCCAAT Contig19169 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1649:12613_1:N:0:GCCAAT Contig32234 6568 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14409:13398_1:N:0:GCCAAT Contig485540 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21079:13617_1:N:0:GCCAAT Contig1918 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6908:15492_1:N:0:GCCAAT Contig397146 363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15572:16164_1:N:0:GCCAAT Contig52515 24346 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17754:16751_1:N:0:GCCAAT Contig634279 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19458:18390_1:N:0:GCCAAT Contig60519 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6419:18764_1:N:0:GCCAAT Contig652377 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17104:19112_1:N:0:GCCAAT Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15472:20656_1:N:0:GCCAAT Contig304261 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5354:22116_1:N:0:GCCAAT Contig376285 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14050:23302_1:N:0:GCCAAT Contig133326 1998 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8895:24153_1:N:0:GCCAAT Contig176125 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16174:25111_1:N:0:GCCAAT Contig500092 274 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3851:26054_1:N:0:GCCAAT Contig324728 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5894:27839_1:N:0:GCCAAT Contig188303 712 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19448:29409_1:N:0:GCCAAT Contig48148 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2561:30197_1:N:0:GCCAAT Contig144517 874 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18846:30110_1:N:0:GCCAAT Contig301221 277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7438:30637_1:N:0:GCCAAT Contig420292 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5924:30816_1:N:0:GCCAAT Contig349057 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2766:32151_1:N:0:GCCAAT Contig635923 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16785:32146_1:N:0:GCCAAT Contig662056 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19999:32260_1:N:0:GCCAAT Contig115524 3088 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10236:32593_1:N:0:GCCAAT Contig599172 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8528:32820_1:N:0:GCCAAT Contig176635 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1756:34473_1:N:0:GCCAAT Contig69353 14452 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7810:34670_1:N:0:GCCAAT Contig125463 2106 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3595:36267_1:N:0:GCCAAT Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1349:36557_1:N:0:GCCAAT Contig132708 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4864:37094_1:N:0:GCCAAT Contig56737 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15297:37463_1:N:0:GCCAAT Contig14259 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3408:37978_1:N:0:GCCAAT Contig412615 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6058:38052_1:N:0:GCCAAT Contig118157 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7432:38037_1:N:0:GCCAAT Contig130184 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9875:38200_1:N:0:GCCAAT Contig398210 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19328:39087_1:N:0:GCCAAT Contig72017 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2677:39352_1:N:0:GCCAAT Contig428568 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8884:40727_1:N:0:GCCAAT Contig27783 23242 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17340:41051_1:N:0:GCCAAT Contig310027 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4215:41791_1:N:0:GCCAAT Contig28864 27255 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19521:42069_1:N:0:GCCAAT Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8803:42266_1:N:0:GCCAAT Contig428079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11062:42921_1:N:0:GCCAAT Contig304083 219 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5081:43482_1:N:0:GCCAAT Contig598386 597 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2993:43764_1:N:0:GCCAAT Contig629506 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19387:43858_1:N:0:GCCAAT Contig84348 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7855:47539_1:N:0:GCCAAT Contig153932 6205 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5171:48271_1:N:0:GCCAAT Contig9771 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15631:48291_1:N:0:GCCAAT Contig647675 445 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4722:51127_1:N:0:GCCAAT Contig232722 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21079:52396_1:N:0:GCCAAT Contig634945 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2153:54426_1:N:0:GCCAAT Contig287217 798 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16272:56813_1:N:0:GCCAAT Contig96252 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6394:58692_1:N:0:GCCAAT Contig435255 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8424:59068_1:N:0:GCCAAT Contig616821 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13290:59524_1:N:0:GCCAAT Contig220546 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4311:60654_1:N:0:GCCAAT Contig358274 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11385:60600_1:N:0:GCCAAT Contig254405 478 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10567:62329_1:N:0:GCCAAT Contig296659 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13424:64542_1:N:0:GCCAAT Contig20320 3619 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15868:64847_1:N:0:GCCAAA Contig541896 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10920:65021_1:N:0:GCCAAT Contig40297 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5823:66490_1:N:0:GCCAAT Contig309032 1105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4061:66677_1:N:0:GCCAAT Contig661959 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13194:70555_1:N:0:GCCAAT Contig485270 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15489:71422_1:N:0:GCCAAT Contig44519 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3010:72547_1:N:0:GCCAAT Contig483363 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15524:72544_1:N:0:GCCAAT Contig28157 62347 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1266:74415_1:N:0:GCCAAT Contig138537 1199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8217:76354_1:N:0:GCCAAT Contig295606 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5570:77229_1:N:0:GCCAAT Contig106896 2964 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19319:77112_1:N:0:GCCAAT Contig123080 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15204:79125_1:N:0:GCCAAT Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10463:80426_1:N:0:GCCAAT Contig523746 140 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16439:80487_1:N:0:GCCAAT Contig49109 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8590:80712_1:N:0:GCCAAT Contig432555 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1635:85306_1:N:0:GCCAAT Contig92262 5018 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20631:85923_1:N:0:GCCAAT Contig521811 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7229:86113_1:N:0:GCCAAT Contig576478 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20765:86305_1:N:0:GCCAAT Contig44932 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8404:86743_1:N:0:GCCAAT Contig319485 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17068:86622_1:N:0:GCCAAT Contig495 38057 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8399:87180_1:N:0:GCCAAT Contig134879 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15405:87771_1:N:0:GCCAAT Contig319334 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13273:88957_1:N:0:GCCAAT Contig438105 113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7081:90297_1:N:0:GCCAAT Contig633668 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9421:90534_1:N:0:GCCAAT Contig523686 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1345:91654_1:N:0:GCCAAT Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16040:94741_1:N:0:GCCAAT Contig105715 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9858:96572_1:N:0:GCCAAT Contig243100 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4932:96878_1:N:0:GCCAAT Contig548765 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10039:98615_1:N:0:GCCAAT Contig331680 107 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15124:98875_1:N:0:GCCAAT Contig631766 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16599:99621_1:N:0:GCCAAT Contig102838 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15718:100430_1:N:0:GCCAAT Contig143965 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5265:2783_1:N:0:GCCAAT Contig8297 6385 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5320:2894_1:N:0:GCCAAT Contig385553 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6224:2871_1:N:0:GCCAAT Contig257123 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4400:3265_1:N:0:GCCAAT Contig222128 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5032:3301_1:N:0:GCCAAT Contig400518 431 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1848:3715_1:N:0:GCCAAT Contig194341 846 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3387:4367_1:N:0:GCCAAT Contig392759 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4576:4929_1:N:0:GCCAAT Contig465922 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10771:5284_1:N:0:GCCAAT Contig426237 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15852:6210_1:N:0:GCCAAT Contig135488 2214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6882:6563_1:N:0:GCCAAT Contig526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6731:6804_1:N:0:GCCAAT Contig135488 2214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3721:7894_1:N:0:GCCAAT Contig65095 5006 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9120:7833_1:N:0:GCCAAT Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19703:9559_1:N:0:GCCAAT Contig657289 115 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6522:10133_1:N:0:GCCAAT Contig15471 215 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8767:10040_1:N:0:GCCAAT Contig73900 1722 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20604:10670_1:N:0:GCCAAT Contig309032 1103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3497:10783_1:N:0:GCCAAT Contig410063 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16275:11018_1:N:0:GCCAAT Contig87693 2676 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1751:13030_1:N:0:GCCAAT Contig627510 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9695:13676_1:N:0:GCCAAT Contig104925 2029 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4452:14221_1:N:0:GCCAAT Contig139777 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6866:14032_1:N:0:GCCAAT Contig387014 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20463:16647_1:N:0:GCCAAT Contig480607 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13056:18173_1:N:0:GCCAAT Contig17965 28042 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2427:19190_1:N:0:GCCAAT Contig168549 384 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3645:19998_1:N:0:GCCAAT Contig96730 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17169:19863_1:N:0:GCCAAT Contig380551 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10201:20271_1:N:0:GCCAAT Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20469:20848_1:N:0:GCCAAT Contig380575 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6265:21306_1:N:0:GCCAAT Contig195358 232 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5634:21766_1:N:0:GCCAAT Contig526039 129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17685:22691_1:N:0:GCCAAT Contig623716 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1691:23242_1:N:0:GCCAAT Contig437755 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20160:23941_1:N:0:GCCAAT Contig231068 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6001:25374_1:N:0:GCCAAT Contig151151 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19840:25632_1:N:0:GCCAAT Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4777:25891_1:N:0:GCCAAT Contig464751 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5429:28465_1:N:0:GCCAAT Contig603493 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18417:28583_1:N:0:GCCAAT Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14784:29277_1:N:0:GCCAAT Contig464079 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2602:32514_1:N:0:GCCAAT Contig693862 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11210:33538_1:N:0:GCCAAT Contig281953 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4301:35293_1:N:0:GCCAAT Contig506272 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5859:35991_1:N:0:GCCAAT Contig98073 6376 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5121:36214_1:N:0:GCCAAT Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7501:36773_1:N:0:GCCAAT Contig459645 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18195:37093_1:N:0:GCCAAT Contig66341 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18263:37689_1:N:0:GCCAAT Contig1221 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17402:38028_1:N:0:GCCAAT Contig195995 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5585:38572_1:N:0:GCCAAT Contig467912 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2575:38999_1:N:0:GCCAAT Contig288598 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6817:38837_1:N:0:GCCAAT Contig673201 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14412:39046_1:N:0:GCCAAT Contig77796 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7429:39647_1:N:0:GCCAAT Contig538219 782 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8939:40585_1:N:0:GCCAAT Contig175506 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9019:40565_1:N:0:GCCAAT Contig91948 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9628:40710_1:N:0:GCCAAT Contig553159 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7789:41095_1:N:0:GCCAAT Contig202265 1403 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18073:41894_1:N:0:GCCAAT Contig51916 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19551:41837_1:N:0:GCCAAT Contig569937 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20188:42729_1:N:0:GCCAAT Contig82937 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20791:42694_1:N:0:GCCAAT Contig587916 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16877:42948_1:N:0:GCCAAT Contig690156 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4460:44660_1:N:0:GCCAAT Contig92479 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10379:45260_1:N:0:GCCAAT Contig123718 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7588:46025_1:N:0:GCCAAT Contig231367 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7911:47378_1:N:0:GCCAAT Contig545431 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16616:49119_1:N:0:GCCAAT Contig337426 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13858:50245_1:N:0:GCCAAT Contig25017 5574 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16448:51616_1:N:0:GCCAAT Contig37790 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5506:53043_1:N:0:GCCAAT Contig147908 719 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20195:54144_1:N:0:GCCAAT Contig232039 117 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8614:54777_1:N:0:GCCAAT Contig21483 8466 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14989:54913_1:N:0:GCCAAT Contig66697 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15169:55629_1:N:0:GCCAAT Contig359718 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17602:57529_1:N:0:GCCAAT Contig2371 10293 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11724:60682_1:N:0:GCCAAT Contig122566 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16876:61281_1:N:0:GCCAAT Contig275044 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19926:62249_1:N:0:GCCAAT Contig60042 4731 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13894:63182_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14819:64264_1:N:0:GCCAAT Contig305045 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3468:65249_1:N:0:GCCAAT Contig688325 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17117:65027_1:N:0:GCCAAT Contig669535 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6359:65415_1:N:0:GCCAAT Contig676640 300 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12009:65849_1:N:0:GCCAAT Contig234905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21224:66840_1:N:0:GCCAAT Contig4463 2757 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9405:67197_1:N:0:GCCAAT Contig481559 119 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8752:68058_1:N:0:GCCAAT Contig569670 202 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7749:68323_1:N:0:GCCAAT Contig127307 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5788:68781_1:N:0:GCCAAT Contig435 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15130:68928_1:N:0:GCCAAT Contig506272 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3287:69779_1:N:0:GCCAAT Contig674476 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17020:70281_1:N:0:GCCAAT Contig402077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19064:70831_1:N:0:GCCAAT Contig137089 1039 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20429:71386_1:N:0:GCCAAT Contig542290 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8998:71703_1:N:0:GCCAAT Contig56256 11238 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20607:73002_1:N:0:GCCAAT Contig651377 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21199:73835_1:N:0:GCCAAT Contig556672 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1537:74994_1:N:0:GCCAAT Contig300536 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11585:75650_1:N:0:GCCAAT Contig421427 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8096:76472_1:N:0:GCCAAT Contig209359 1606 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1119:77302_1:N:0:GCCAAT Contig339390 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10272:77901_1:N:0:GCCAAT Contig121792 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3278:78657_1:N:0:GCCAAT Contig109315 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8140:78870_1:N:0:GCCAAT Contig203001 793 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11123:78776_1:N:0:GCCAAT Contig84840 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1973:81804_1:N:0:GCCAAT Contig427238 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1568:82808_1:N:0:GCCAAT Contig471935 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18328:83838_1:N:0:GCCAAT Contig261369 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4052:84793_1:N:0:GCCAAT Contig146962 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5169:85448_1:N:0:GCCAAT Contig449195 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14515:85259_1:N:0:GCCAAT Contig8736 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18174:86755_1:N:0:GCCAAT Contig501334 119 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15280:87037_1:N:0:GCCAAT Contig93717 16359 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18475:88798_1:N:0:GCCAAT Contig39678 4958 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18475:88869_1:N:0:GCCAAT Contig24949 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4667:89790_1:N:0:GCCAAT Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20680:90575_1:N:0:GCCAAT Contig153670 1523 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19491:91235_1:N:0:GCCAAT Contig411016 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6576:91302_1:N:0:GCCAAT Contig348633 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7840:93329_1:N:0:GCCAAT Contig56997 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9461:94168_1:N:0:GCCAAT Contig333078 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14939:94697_1:N:0:GCCAAT Contig544718 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15151:95932_1:N:0:GCCAAT Contig456329 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4000:96193_1:N:0:GCCAAT Contig517546 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11079:96817_1:N:0:GCCAAT Contig198506 577 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12554:97591_1:N:0:GCCAAT Contig28967 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6173:98629_1:N:0:GCCAAT Contig370478 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7895:98897_1:N:0:GCCAAT Contig551740 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8838:100204_1:N:0:GCCAAT Contig11051 1541 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15689:100939_1:N:0:GCCAAT Contig23995 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10490:2390_1:N:0:GCCAAT Contig226093 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13092:2299_1:N:0:GCCAAT Contig343139 127 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4321:3387_1:N:0:GCCAAT Contig23010 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4203:4354_1:N:0:GCCAAT Contig85438 3410 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18735:4979_1:N:0:GCCAAT Contig250311 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1534:5507_1:N:0:GCCAAT Contig192190 695 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18949:5676_1:N:0:GCCAAT Contig256992 182 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5259:6277_1:N:0:GCCAAT Contig544787 150 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18916:6522_1:N:0:GCCAAT Contig525808 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11308:7141_1:N:0:GCCAAT Contig461740 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17745:7625_1:N:0:GCCAAT Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3286:8814_1:N:0:GCCAAT Contig601866 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4631:9790_1:N:0:GCCAAT Contig473259 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8304:10157_1:N:0:GCCAAT Contig233165 161 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8328:11530_1:N:0:GCCAAT Contig218960 1290 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3891:12710_1:N:0:GCCAAT Contig67821 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16360:13543_1:N:0:GCCAAT Contig31505 359 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8335:13970_1:N:0:GCCAAT Contig184708 993 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7342:15615_1:N:0:GCCAAT Contig106811 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12865:18846_1:N:0:GCCAAT Contig231516 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20399:19434_1:N:0:GCCAAT Contig327835 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14789:19524_1:N:0:GCCAAT Contig549992 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14799:19558_1:N:0:GCCAAT Contig549992 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14756:19566_1:N:0:GCCAAT Contig549992 70 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 787129 (78.71%) aligned 0 times 109717 (10.97%) aligned exactly 1 time 103154 (10.32%) aligned >1 times 21.29% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 373180 (37.32%) aligned 0 times 215007 (21.50%) aligned exactly 1 time 4118131000000 ( reads; of these:41.18 % ) aligned >1 times1000000 (62.68% overall alignment rate 100.00%) were unpaired; of these: 788292 (78.83%) aligned 0 times 109041 (10.90%) aligned exactly 1 time 102667 (10.27%) aligned >1 times 21.17% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 370693 (37.07%) aligned 0 times 215823 (21.58%) aligned exactly 1 time 413484 (41.35%) aligned >1 times 62.93% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 6_GCCAAT_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 6_GCCAAT_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 395712 Mapping efficiency: 39.6% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2235158 Total methylated C's in CpG context: 82834 Total methylated C's in CHG context: 7846 Total methylated C's in CHH context: 129683 Total methylated C's in Unknown context: 39 Total unmethylated C's in CpG context: 223364 Total unmethylated C's in CHG context: 403520 Total unmethylated C's in CHH context: 1387911 Total unmethylated C's in Unknown context: 383 C methylated in CpG context: 27.1% C methylated in CHG context: 1.9% C methylated in CHH context: 8.5% C methylated in Unknown context (CN or CHN): 9.2% Bismark completed in 0d 2h 10m 41s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/7_CAGATC_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 7_CAGATC_L001_R1_001_trimmed.fq.gz to 7_CAGATC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 7_CAGATC_L001_R1_001_trimmed.fq.gz to 7_CAGATC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 7_CAGATC_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 7_CAGATC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 7_CAGATC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 7_CAGATC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1544:2214_1:N:0:CAGATC 0 Contig2550_CT_converted 26716 1 31M * 0 0 GGGGTTTTAATAGGGGATTAAAGTTTTATAT HFHIFHJJIJJIIBDBHIIJJII>FHGGGGI AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for CTreadGAgenome (reading in sequences from 7_CAGATC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1544:2214_1:N:0:CAGATC 16 Contig41168_GA_converted 27152 1 31M * 0 0 ATATAAAACTTTAATCCCCTATTAAAACCCC IGGGGHF>IIJJIIHBDBIIJJIJJHFIHFH AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadCTgenome (reading in sequences from 7_CAGATC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1544:2214_1:N:0:CAGATC 4 * 0 0 * * 0 0 AAAATTTTAATAAAAAATTAAAATTTTATAT HFHIFHJJIJJIIBDBHIIJJII>FHGGGGI YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 7_CAGATC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1544:2214_1:N:0:CAGATC 4 * 0 0 * * 0 0 AAAATTTTAATAAAAAATTAAAATTTTATAT HFHIFHJJIJJIIBDBHIIJJII>FHGGGGI YT:Z:UU >>> Writing bisulfite mapping results to 7_CAGATC_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/7_CAGATC_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1681:2838_1:N:0:CAGATC Contig643204 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20338:5312_1:N:0:CAGATC Contig79999 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17314:12271_1:N:0:CAGATC Contig106048 4246 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13074:13411_1:N:0:CAGATC Contig330930 136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16162:16870_1:N:0:CAGATC Contig4101 7998 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9219:19060_1:N:0:CAGATC Contig219651 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18914:20015_1:N:0:CAGATC Contig263825 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3134:21489_1:N:0:CAGATC Contig26733 12936 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19647:21955_1:N:0:CAGATC Contig139311 6129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12836:22389_1:N:0:CAGATC Contig6976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10860:25173_1:N:0:CAGATC Contig350492 135 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8822:25322_1:N:0:CAGATC Contig59612 5199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2555:25656_1:N:0:CAGATC Contig214006 612 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8151:26956_1:N:0:CAGATC Contig621206 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12475:28089_1:N:0:CAGATC Contig332771 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15925:28281_1:N:0:CAGATC Contig666881 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12526:28524_1:N:0:CAGATC Contig297842 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14955:32426_1:N:0:CAGATC Contig287409 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14982:32450_1:N:0:CAGATC Contig287409 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15919:39397_1:N:0:CAGATC Contig242500 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5926:39809_1:N:0:CAGATC Contig32549 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14836:39772_1:N:0:CAGATC Contig422747 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11441:41210_1:N:0:CAGATC Contig282303 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20692:41733_1:N:0:CAGATC Contig253450 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12088:42442_1:N:0:CAGATC Contig2547 23600 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17451:42568_1:N:0:CAGATC Contig447780 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14411:43990_1:N:0:CAGATC Contig1841 24858 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5097:44063_1:N:0:CAGATC Contig52297 3423 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20784:44417_1:N:0:CAGATC Contig339383 110 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16089:44552_1:N:0:CAGATC Contig314022 149 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7400:45756_1:N:0:CAGATC Contig234579 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9136:46199_1:N:0:CAGATC Contig143225 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3560:46279_1:N:0:CAGATC Contig502258 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19473:48063_1:N:0:CAGATC Contig454885 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5451:49149_1:N:0:CAGATC Contig649501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20874:50459_1:N:0:CAGATC Contig104193 3773 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6113:53379_1:N:0:CAGATC Contig326886 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21124:53560_1:N:0:CAGATC Contig543143 207 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15951:54310_1:N:0:CAGATC Contig19224 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2299:54948_1:N:0:CAGATC Contig428079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5321:55428_1:N:0:CAGATC Contig531779 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15185:57212_1:N:0:CAGATC Contig387667 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3620:57410_1:N:0:CAGATC Contig44199 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11560:57525_1:N:0:CAGATC Contig376058 170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12839:59129_1:N:0:CAGATC Contig22900 28602 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20155:60209_1:N:0:CAGATC Contig34260 1271 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9983:61799_1:N:0:CAGATC Contig533827 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20011:62115_1:N:0:CAGATC Contig452425 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2923:62258_1:N:0:CAGATC Contig305045 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5858:65221_1:N:0:CAGATC Contig37569 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11315:66146_1:N:0:CAGATC Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9432:66454_1:N:0:CAGATC Contig56012 31869 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16151:69984_1:N:0:CAGATC Contig51703 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6735:71345_1:N:0:CAGATC Contig417228 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1159:72246_1:N:0:CAGATC Contig127350 1618 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6263:75387_1:N:0:CAGATC Contig188524 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10199:77051_1:N:0:CAGATC Contig240568 112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3551:79650_1:N:0:CAGATC Contig219580 567 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8714:79680_1:N:0:CAGATC Contig669643 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9029:82236_1:N:0:CAGATC Contig576107 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15913:83944_1:N:0:CAGATC Contig275044 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3506:84497_1:N:0:CAGATC Contig60042 4731 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15360:85126_1:N:0:CAGATC Contig246927 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11331:86296_1:N:0:CAGATC Contig77904 2667 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14374:91606_1:N:0:CAGATC Contig392759 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18984:94692_1:N:0:CAGATC Contig185934 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1703:95713_1:N:0:CAGATC Contig561630 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6856:97927_1:N:0:CAGATC Contig149715 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2797:2669_1:N:0:CAGATC Contig548319 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17313:3158_1:N:0:CAGATC Contig67875 8464 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9481:3769_1:N:0:CAGATC Contig659675 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5208:4031_1:N:0:CAGATC Contig14964 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10814:4195_1:N:0:CAGATC Contig695538 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10949:6790_1:N:0:CAGATC Contig146131 1132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2399:9798_1:N:0:CAGATC Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12915:10348_1:N:0:CAGATC Contig263785 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17125:11794_1:N:0:CAGATC Contig219580 566 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11587:12948_1:N:0:CAGATC Contig672743 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20465:13638_1:N:0:CAGATC Contig412205 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3282:13792_1:N:0:CAGATC Contig3564 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12429:15281_1:N:0:CAGATC Contig642634 532 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8182:17327_1:N:0:CAGATC Contig140900 1629 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9821:17631_1:N:0:CAGATC Contig161050 4176 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9753:18039_1:N:0:CAGATC Contig523625 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12960:18214_1:N:0:CAGATC Contig206951 1716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14175:20356_1:N:0:CAGATC Contig217905 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19544:20560_1:N:0:CAGATC Contig76139 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4505:21142_1:N:0:CAGATC Contig27128 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16175:21886_1:N:0:CAGATC Contig690918 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2878:23127_1:N:0:CAGATC Contig54206 1213 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5316:24345_1:N:0:CAGATC Contig483238 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2973:31857_1:N:0:CAGATC Contig365695 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4298:33493_1:N:0:CAGATC Contig481837 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3064:34561_1:N:0:CAGATC Contig512866 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19246:34934_1:N:0:CAGATC Contig660929 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1932:35547_1:N:0:CAGATC Contig453430 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19605:35693_1:N:0:CAGATC Contig649568 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1300:35984_1:N:0:CAGATC Contig156638 13243 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11331:37550_1:N:0:CAGATC Contig630931 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16468:37515_1:N:0:CAGATC Contig691560 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1506:38840_1:N:0:CAGATC Contig203132 730 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21034:39042_1:N:0:CAGATC Contig60814 2615 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2836:39782_1:N:0:CAGATC Contig617225 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7772:41497_1:N:0:CAGATC Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5639:42474_1:N:0:CAGATC Contig449100 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6516:42962_1:N:0:CAGATC Contig71779 14343 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5374:46456_1:N:0:CAGATC Contig594493 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13900:50651_1:N:0:CAGATC Contig262677 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6948:51612_1:N:0:CAGATC Contig27100 19770 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15984:52484_1:N:0:CAGATC Contig54989 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1659:53826_1:N:0:CAGATC Contig173708 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10819:54996_1:N:0:CAGATC Contig124112 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7140:55755_1:N:0:CAGATC Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6306:56081_1:N:0:CAGATC Contig322890 225 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16837:58214_1:N:0:CAGATC Contig34642 26870 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20384:58904_1:N:0:CAGATC Contig306108 180 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2972:59181_1:N:0:CAGATC Contig28855 192 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8855:59945_1:N:0:CAGATC Contig46225 11053 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18751:63309_1:N:0:CAGATC Contig334342 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10843:64929_1:N:0:CAGATC Contig14829 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13012:66874_1:N:0:CAGATC Contig628747 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16110:66889_1:N:0:CAGATC Contig26380 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12242:68973_1:N:0:CAGATC Contig535501 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3620:69331_1:N:0:CAGATC Contig616470 120 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13547:72030_1:N:0:CAGATC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11686:73079_1:N:0:CAGATC Contig598079 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7123:73418_1:N:0:CAGATC Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9418:75276_1:N:0:CAGATC Contig474329 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9795:76800_1:N:0:CAGATC Contig373353 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8249:79136_1:N:0:CAGATC Contig405619 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1826:79795_1:N:0:CAGATC Contig63267 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3974:81945_1:N:0:CAGATC Contig56256 11236 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15276:82545_1:N:0:CAGATC Contig143583 4039 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2260:83634_1:N:0:CAGATC Contig687343 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7896:86350_1:N:0:CAGATC Contig576006 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15379:89895_1:N:0:CAGATC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1429:90592_1:N:0:CAGATC Contig211945 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1603:91404_1:N:0:CAGATC Contig37764 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2561:92816_1:N:0:CAGATC Contig394412 414 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11993:93414_1:N:0:AAGATC Contig179806 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9976:97773_1:N:0:CAGATC Contig1975 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15218:97787_1:N:0:CAGATC Contig617279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13458:98566_1:N:0:CAGATC Contig636632 224 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19297:100876_1:N:0:CAGATC Contig690840 3149 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5554:4526_1:N:0:CAGATC Contig599214 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10149:6776_1:N:0:CAGATC Contig611004 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20429:7396_1:N:0:CAGATC Contig1548 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3881:9443_1:N:0:CAGATC Contig331517 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7076:9636_1:N:0:CAGATC Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14997:9506_1:N:0:CAGATC Contig241847 139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9120:9972_1:N:0:CAGATC Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1999:10409_1:N:0:CAGATC Contig407588 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10780:12291_1:N:0:CAGATC Contig15987 6186 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19803:16323_1:N:0:CAGATC Contig441696 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12523:20218_1:N:0:CAGATC Contig268099 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3398:20467_1:N:0:CAGATC Contig489251 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12086:21805_1:N:0:CAGATC Contig292106 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7490:23169_1:N:0:CAGATC Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14867:23165_1:N:0:CAGATC Contig533255 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18925:23237_1:N:0:CAGATC Contig419136 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7808:25469_1:N:0:CAGATC Contig12397 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9703:25591_1:N:0:CAGATC Contig619591 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3296:26097_1:N:0:CAGATC Contig36896 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12779:28720_1:N:0:CAGATC Contig519196 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12351:30124_1:N:0:CAGATC Contig100068 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4743:31269_1:N:0:CAGATC Contig621451 126 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5138:32847_1:N:0:CAGATC Contig214444 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9113:32871_1:N:0:CAGATC Contig234028 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16759:33116_1:N:0:CAGATC Contig289313 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21195:33139_1:N:0:CAGATC Contig235362 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9092:35901_1:N:0:CAGATC Contig390793 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20722:36570_1:N:0:CAGATC Contig440836 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9603:39017_1:N:0:CAGATC Contig403223 205 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14559:39343_1:N:0:CAGATC Contig322052 402 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3491:46539_1:N:0:CAGATC Contig669526 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18467:47238_1:N:0:CAGATC Contig236742 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8838:47509_1:N:0:CAGATC Contig663539 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5582:48953_1:N:0:CAGATC Contig251019 119 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8542:53564_1:N:0:CAGATC Contig55435 13071 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15677:54203_1:N:0:CAGATC Contig406059 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11673:55744_1:N:0:CAGATC Contig210739 834 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4920:57665_1:N:0:CAGATC Contig407304 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9646:58144_1:N:0:CAGATC Contig669243 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15583:59425_1:N:0:CAGATC Contig382162 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6569:59815_1:N:0:CAGATC Contig24308 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17877:62291_1:N:0:CAGATC Contig585172 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20640:63006_1:N:0:CAGATC Contig328878 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10580:63347_1:N:0:CAGATC Contig185737 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12488:63910_1:N:0:CAGATC Contig569102 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19005:65926_1:N:0:CAGATC Contig420390 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2457:67154_1:N:0:CAGATC Contig675500 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5354:67536_1:N:0:CAGATC Contig653339 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5863:67958_1:N:0:CAGATC Contig152197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15836:69685_1:N:0:CAGATC Contig359585 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14002:70675_1:N:0:CAGATC Contig132613 880 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15152:71111_1:N:0:CAGATC Contig291101 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21204:71637_1:N:0:CAGATC Contig306797 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12094:71892_1:N:0:CAGATC Contig500144 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19580:73179_1:N:0:CAGATC Contig590631 241 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18429:73503_1:N:0:CAGATC Contig19315 1502 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9965:74145_1:N:0:CAGATC Contig338919 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1786:76038_1:N:0:CAGATC Contig10294 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19687:77199_1:N:0:CAGATC Contig95264 3029 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20671:79951_1:N:0:CAGATC Contig193874 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5362:81149_1:N:0:CAGATC Contig222597 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14202:81455_1:N:0:CAGATC Contig414732 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7829:82266_1:N:0:CAGATC Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19415:82354_1:N:0:CAGATC Contig201975 947 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19775:83686_1:N:0:CAGATC Contig654002 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:6016:84510_1:N:0:CAGATC Contig375120 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2919:87222_1:N:0:CAGATC Contig71558 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16700:87401_1:N:0:CAGATC Contig414743 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8400:88409_1:N:0:CAGATC Contig33796 23695 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14191:91563_1:N:0:CAGATC Contig675953 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15662:92423_1:N:0:CAGATC Contig298350 123 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5257:94317_1:N:0:CAGATC Contig1548 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14439:94700_1:N:0:CAGATC Contig693137 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10656:98215_1:N:0:CAGATC Contig307018 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20559:100134_1:N:0:CAGATC Contig127394 5049 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13608:100780_1:N:0:CAGATC Contig525565 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2723:4280_1:N:0:CAGATC Contig212609 708 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21177:5794_1:N:0:CAGATC Contig11511 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7075:8774_1:N:0:CAGATC Contig668768 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16796:8781_1:N:0:CAGATC Contig516262 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7308:10738_1:N:0:CAGATC Contig530677 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16512:11139_1:N:0:CAGATC Contig477540 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2588:11637_1:N:0:CAGATC Contig45852 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18776:12083_1:N:0:CAGATC Contig399177 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5990:13357_1:N:0:CAGATC Contig641200 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7482:13351_1:N:0:CAGATC Contig139048 1036 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9159:15240_1:N:0:CAGATC Contig362252 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14469:15121_1:N:0:CAGATC Contig675500 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1183:17020_1:N:0:CAGATC Contig650788 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6595:17971_1:N:0:CAGATC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20154:18544_1:N:0:CAGATC Contig24029 6625 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7303:19099_1:N:0:CAGATC Contig421799 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4265:19549_1:N:0:CAGATC Contig61383 5333 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4894:20238_1:N:0:CAGATC Contig89063 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14060:20056_1:N:0:CAGATC Contig197598 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10344:20901_1:N:0:CAGATC Contig156559 431 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4343:21612_1:N:0:CAGATC Contig108884 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5967:22159_1:N:0:CAGATC Contig568374 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8933:22206_1:N:0:CAGATC Contig67445 2488 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2194:23462_1:N:0:CAGATC Contig343041 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4409:24835_1:N:0:CAGATC Contig12358 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3839:27639_1:N:0:CAGATC Contig389432 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12222:27510_1:N:0:CAGATC Contig239863 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20027:31556_1:N:0:CAGATC Contig655447 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15160:32204_1:N:0:CAGATC Contig523485 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19352:34035_1:N:0:CAGATC Contig169980 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17538:35015_1:N:0:CAGATC Contig195728 954 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7121:37252_1:N:0:CAGATC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11095:37260_1:N:0:CAGATC Contig299699 155 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14099:38727_1:N:0:CAGATC Contig134090 8099 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2977:39037_1:N:0:CAGATC Contig450379 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16956:39629_1:N:0:CAGATC Contig521979 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21115:39724_1:N:0:CAGATC Contig34958 19724 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4827:40283_1:N:0:CAGATC Contig632850 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16814:40605_1:N:0:CAGATC Contig553242 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5093:46432_1:N:0:CAGATC Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11325:47935_1:N:0:CAGATC Contig346121 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8169:52408_1:N:0:CAGATC Contig221717 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12827:52583_1:N:0:CAGATC Contig501661 1130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12867:52583_1:N:0:CAGATC Contig501661 1130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16246:52740_1:N:0:CAGATC Contig101742 9014 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14808:53388_1:N:0:CAGATC Contig222027 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4005:53538_1:N:0:CAGATC Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4009:53976_1:N:0:CAGATC Contig60066 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7833:54747_1:N:0:CAGATC Contig23489 9537 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2406:56341_1:N:0:CAGATC Contig54039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2852:56494_1:N:0:CAGATC Contig310261 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20879:56409_1:N:0:CAGATC Contig121994 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21134:57634_1:N:0:CAGATC Contig546759 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2516:60427_1:N:0:CAGATC Contig403669 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14932:60467_1:N:0:CAGATC Contig406952 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7689:60651_1:N:0:CAGATC Contig666477 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1981:65076_1:N:0:CAGATC Contig641822 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16797:65605_1:N:0:CAGATC Contig394412 414 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13597:66097_1:N:0:CAGATC Contig52263 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10482:67608_1:N:0:CAGATC Contig438364 1030 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14370:71248_1:N:0:CAGATC Contig435120 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1185:71698_1:N:0:CAGATC Contig460360 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7817:71574_1:N:0:CAGATC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13334:71789_1:N:0:CAGATC Contig249462 330 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4133:73053_1:N:0:CAGATC Contig77471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4295:73237_1:N:0:CAGATC Contig380138 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17183:75466_1:N:0:CAGATC Contig118323 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12495:75835_1:N:0:CAGATC Contig179029 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12260:75895_1:N:0:CAGATC Contig88236 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9197:76014_1:N:0:CAGATC Contig566164 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17928:76334_1:N:0:CAGATC Contig354921 415 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6692:80230_1:N:0:CAGATC Contig185638 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9863:81270_1:N:0:CAGATC Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5894:81675_1:N:0:CAGATC Contig35367 9472 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13318:82990_1:N:0:CAGATC Contig671633 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7069:83699_1:N:0:CAGATC Contig545560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18709:85293_1:N:0:CAGATC Contig694375 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20105:86153_1:N:0:CAGATC Contig31871 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7408:87331_1:N:0:CAGATC Contig502543 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4773:88428_1:N:0:CAGATC Contig231616 170 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6455:90897_1:N:0:CAGATC Contig459966 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6311:94529_1:N:0:CAGATC Contig100873 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1797:96052_1:N:0:CAGATC Contig79524 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4400:98877_1:N:0:CAGATC Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12192:99053_1:N:0:CAGATC Contig634036 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9477:2313_1:N:0:CAGATC Contig166828 722 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9493:3271_1:N:0:CAGATC Contig674379 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9567:4119_1:N:0:CAGATC Contig83075 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15174:4665_1:N:0:CAGATC Contig417066 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19881:5271_1:N:0:CAGATC Contig16985 786 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2727:7493_1:N:0:CAGATC Contig639957 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5832:8157_1:N:0:CAGATC Contig118490 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7254:9205_1:N:0:CAGATC Contig176411 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21084:9347_1:N:0:CAGATC Contig231401 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13076:11191_1:N:0:CAGATC Contig54039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12470:11687_1:N:0:CAGATC Contig45892 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3882:12410_1:N:0:CAGATC Contig284014 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18906:12822_1:N:0:CAGATC Contig584238 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16896:14115_1:N:0:CAGATC Contig249589 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8975:15369_1:N:0:CAGATC Contig247536 374 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7297:15719_1:N:0:CAGATC Contig76256 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17353:17305_1:N:0:CAGATC Contig270296 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15356:20123_1:N:0:CAGATC Contig317724 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19107:20665_1:N:0:CAGATC Contig597988 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2569:23657_1:N:0:CAGATC Contig52748 1590 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20380:24016_1:N:0:CAGATC Contig202506 795 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17814:25193_1:N:0:CAGATC Contig63273 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1207:25918_1:N:0:CAGACC Contig525282 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10904:27386_1:N:0:CAGATC Contig614411 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10211:29701_1:N:0:CAGATC Contig515784 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16540:29537_1:N:0:CAGATC Contig278505 166 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6687:30655_1:N:0:CAGATC Contig455973 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10719:31142_1:N:0:CAGATC Contig691738 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7518:32708_1:N:0:CAGATC Contig58012 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11759:33477_1:N:0:CAGATC Contig122243 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13918:33571_1:N:0:CAGATC Contig292856 135 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20722:35333_1:N:0:CAGATC Contig427079 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2838:36070_1:N:0:CAGATC Contig467114 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20851:36213_1:N:0:CAGATC Contig656397 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4489:36799_1:N:0:CAGATC Contig251909 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10023:36829_1:N:0:CAGATC Contig688016 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16345:37640_1:N:0:CAGATC Contig63016 3056 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17249:41327_1:N:0:CAGATC Contig341117 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2190:42783_1:N:0:CAGATC Contig310200 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5410:43175_1:N:0:CAGATC Contig16985 787 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10529:47704_1:N:0:CAGATC Contig454423 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13891:48093_1:N:0:CAGATC Contig49158 9940 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13927:48116_1:N:0:CAGATC Contig49158 9940 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17428:50331_1:N:0:CAGATC Contig403352 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16680:51399_1:N:0:CAGATC Contig696283 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2388:52352_1:N:0:CAGATC Contig116905 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8322:52655_1:N:0:CAGATC Contig284670 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21061:52586_1:N:0:CAGATC Contig66311 4540 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3353:54368_1:N:0:CAGATC Contig317992 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16601:55927_1:N:0:CAGATC Contig14110 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3737:58495_1:N:0:CAGATC Contig460818 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6294:59123_1:N:0:CAGATC Contig124772 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5025:59970_1:N:0:CAGATC Contig413553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16129:60047_1:N:0:CAGATC Contig375488 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14497:62301_1:N:0:CAGATC Contig671478 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16636:66832_1:N:0:CAGATC Contig637906 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6166:67660_1:N:0:CAGATC Contig97039 2734 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20399:69056_1:N:0:CAGATC Contig692941 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13911:70614_1:N:0:CAGATC Contig255907 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9361:71999_1:N:0:CAGATC Contig211717 3813 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7231:72861_1:N:0:CAGATC Contig182529 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1219:77169_1:N:0:CAGATC Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7248:79408_1:N:0:CAGATC Contig409200 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5175:80609_1:N:0:CAGATC Contig196877 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5461:83466_1:N:0:CAGATC Contig19163 16953 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8219:84235_1:N:0:CAGATC Contig89845 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6325:84898_1:N:0:CAGATC Contig249933 1866 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18389:89405_1:N:0:CAGATC Contig514909 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10154:89678_1:N:0:CAGATC Contig64785 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2929:91408_1:N:0:CAGATC Contig318173 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6078:95642_1:N:0:CAGATC Contig13557 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1620:96139_1:N:0:CAGATC Contig39721 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19854:96322_1:N:0:CAGATC Contig320423 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6520:97704_1:N:0:CAGATC Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6744:97993_1:N:0:CAGATC Contig382532 145 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17059:98043_1:N:0:CAGATC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16332:99780_1:N:0:CAGATC Contig219529 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18615:101091_1:N:0:CAGATC Contig63990 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7621:2348_1:N:0:CAGATC Contig143774 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3889:2790_1:N:0:CAGATC Contig361333 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18664:3050_1:N:0:CAGATC Contig214013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16397:4609_1:N:0:CAGATC Contig469363 120 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10036:4948_1:N:0:CAGATC Contig622844 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11171:5413_1:N:0:CAGATC Contig226780 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19765:5885_1:N:0:CAGATC Contig586352 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17132:7652_1:N:0:CAGATC Contig393342 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13896:8418_1:N:0:CAGATC Contig268227 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10540:11802_1:N:0:CAGATC Contig318202 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10815:12600_1:N:0:CAGATC Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12348:14498_1:N:0:CAGATC Contig688403 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20627:14758_1:N:0:CAGATC Contig158704 1089 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3352:15413_1:N:0:CAGATC Contig467756 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7797:15482_1:N:0:CAGATC Contig448129 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12286:16097_1:N:0:CAGATC Contig100388 1700 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6597:16585_1:N:0:CAGATC Contig328949 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7506:16733_1:N:0:CAGATC Contig576468 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18412:17024_1:N:0:CAGATC Contig187643 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4116:18058_1:N:0:CAGATC Contig257649 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11541:19708_1:N:0:CAGATC Contig533954 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9028:20338_1:N:0:CAGATC Contig491016 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19807:21597_1:N:0:CAGATC Contig233955 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3749:23973_1:N:0:CAGATC Contig249361 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14874:23952_1:N:0:CAGATC Contig207323 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6396:26752_1:N:0:CAGATC Contig281033 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16403:27016_1:N:0:CAGATC Contig406304 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13319:27295_1:N:0:CAGATC Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12892:29665_1:N:0:CAGATC Contig32293 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3118:30080_1:N:0:CAGATC Contig614071 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17922:31484_1:N:0:CAGATC Contig182247 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3840:31790_1:N:0:CAGATC Contig313125 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16970:33717_1:N:0:CAGATC Contig231756 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9334:35063_1:N:0:CAGATC Contig300296 927 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21135:36114_1:N:0:CAGATC Contig94971 2660 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19437:39120_1:N:0:CAGATC Contig144926 860 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3053:39680_1:N:0:CAGATC Contig471716 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14207:39920_1:N:0:CAGATC Contig13722 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1793:41413_1:N:0:CAGATC Contig502554 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4754:41621_1:N:0:CAGATC Contig158022 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18728:42009_1:N:0:CAGATC Contig134568 1030 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1234:42473_1:N:0:CAGATC Contig322890 227 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18417:43436_1:N:0:CAGATC Contig505029 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17221:45599_1:N:0:CAGATC Contig501279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9391:46120_1:N:0:CAGATC Contig261864 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9942:46046_1:N:0:CAGATC Contig287654 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4756:47531_1:N:0:CAGATC Contig679606 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2800:49109_1:N:0:CAGATC Contig454366 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5360:49507_1:N:0:CAGATC Contig388593 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10139:49997_1:N:0:CAGATC Contig12516 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19608:50191_1:N:0:CAGATC Contig60042 4732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4127:53387_1:N:0:CAGATC Contig494366 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9190:54545_1:N:0:CAGATC Contig414554 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10245:54836_1:N:0:CAGATC Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:21286:57103_1:N:0:CAGATC Contig560 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2950:58115_1:N:0:CAGATC Contig90422 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15763:59281_1:N:0:CAGATC Contig515433 153 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2828:60455_1:N:0:CAGATC Contig2546 35776 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6031:62180_1:N:0:CAGATC Contig542746 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8028:63170_1:N:0:CAGATC Contig399815 144 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18412:63228_1:N:0:CAGATC Contig566930 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1441:65538_1:N:0:CAGATC Contig526369 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6143:66951_1:N:0:CAGATC Contig306797 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7956:67001_1:N:0:CAGATC Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6195:68646_1:N:0:CAGATC Contig607675 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12153:68601_1:N:0:CAGATC Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4649:69172_1:N:0:CAGATC Contig533827 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5915:69512_1:N:0:CAGATC Contig601866 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7479:69696_1:N:0:CAGATC Contig393612 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14523:69789_1:N:0:CAGATC Contig29585 1024 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16888:71152_1:N:0:CAGATC Contig20710 16732 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7483:71377_1:N:0:CAGATC Contig536932 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4452:72565_1:N:0:CAGATC Contig191320 988 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17689:73024_1:N:0:CAGATC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9922:73284_1:N:0:CAGATC Contig200683 8082 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10085:74480_1:N:0:CAGATC Contig454135 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3865:74571_1:N:0:CAGATC Contig24438 33136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7068:75475_1:N:0:CAGATC Contig174296 1649 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5767:76144_1:N:0:CAGATC Contig26 46776 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16355:77463_1:N:0:CAGATC Contig363124 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17144:78322_1:N:0:CAGATC Contig303734 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1187:78582_1:N:0:CAGATC Contig659091 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10186:79665_1:N:0:CAGATC Contig19140 10460 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18579:79792_1:N:0:CAGATC Contig688943 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4345:81462_1:N:0:CAGATC Contig271584 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11085:82327_1:N:0:CAGATC Contig564631 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17770:85547_1:N:0:CAGATC Contig15444 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4143:86851_1:N:0:CAGATC Contig33247 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6277:87012_1:N:0:CAGATC Contig55720 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13684:89573_1:N:0:CAGATC Contig420416 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13155:93085_1:N:0:CAGATC Contig264801 338 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15339:93956_1:N:0:CAGATC Contig371485 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7763:97080_1:N:0:CAGATC Contig17279 988 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11091:98466_1:N:0:CAGATC Contig112006 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2372:100947_1:N:0:CAGATC Contig59889 13668 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18599:100815_1:N:0:CAGATC Contig285587 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1815:2291_1:N:0:CAGATC Contig623559 161 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16782:3363_1:N:0:CAGATC Contig287247 232 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20434:3724_1:N:0:CAGATC Contig426237 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3954:8300_1:N:0:CAGATC Contig292740 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6663:8936_1:N:0:CAGATC Contig522250 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3591:13657_1:N:0:CAGATC Contig127952 794 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6953:13885_1:N:0:CAGATC Contig473294 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2760:15321_1:N:0:CAGATC Contig459639 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6470:15268_1:N:0:CAGATC Contig274391 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16675:16458_1:N:0:CAGATC Contig109778 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19385:19677_1:N:0:CAGATC Contig538134 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12467:20029_1:N:0:CAGATC Contig26708 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13731:21043_1:N:0:CAGATC Contig426956 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6896:21543_1:N:0:CAGATC Contig287972 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16908:21641_1:N:0:CAGATC Contig94742 8680 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13111:23043_1:N:0:CAGATC Contig78826 2073 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3436:23304_1:N:0:CAGATC Contig386057 118 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3040:23939_1:N:0:CAGATC Contig588043 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3248:25478_1:N:0:CAGATC Contig511289 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9324:29669_1:N:0:CAGATC Contig516746 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15562:30167_1:N:0:CAGATC Contig569137 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1119:31940_1:N:0:CAGATC Contig442713 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6989:32007_1:N:0:CAGATC Contig89443 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15593:33722_1:N:0:CAGATC Contig397146 363 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9641:34267_1:N:0:CAGATC Contig55096 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6872:34860_1:N:0:CAGATC Contig454844 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3322:35041_1:N:0:CAGATC Contig432837 2173 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6954:35837_1:N:0:CAGATC Contig205168 962 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17614:35935_1:N:0:CAGATC Contig493721 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6421:38132_1:N:0:CAGATC Contig627279 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4259:39588_1:N:0:CAGATC Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11019:40141_1:N:0:CAGATC Contig598590 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12780:42521_1:N:0:CAGATC Contig203603 894 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12683:42947_1:N:0:CAGATC Contig52471 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12543:43636_1:N:0:CAGATC Contig602178 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3415:45834_1:N:0:CAGATC Contig370910 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17120:46530_1:N:0:CAGATC Contig277644 149 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4152:47921_1:N:0:CAGATC Contig279673 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5985:49051_1:N:0:CAGATC Contig394389 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16261:51446_1:N:0:CAGATC Contig118289 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13071:51805_1:N:0:CAGATA Contig256548 132 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19650:53069_1:N:0:CAGATC Contig271890 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20805:53234_1:N:0:CAGATC Contig691360 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1624:53934_1:N:0:CAGATC Contig260485 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2438:54717_1:N:0:CAGATC Contig202265 1402 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15747:55795_1:N:0:CAGATC Contig158385 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10576:56171_1:N:0:CAGATC Contig380138 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7238:59202_1:N:0:CAGATC Contig381776 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5037:60802_1:N:0:CAGATC Contig75414 2891 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5986:62177_1:N:0:CAGATC Contig458308 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13828:63623_1:N:0:CAGATC Contig11516 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10038:64754_1:N:0:CAGATC Contig143774 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20810:70784_1:N:0:CAGATC Contig376109 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2951:74785_1:N:0:CAGATC Contig194664 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18782:75552_1:N:0:CAGATC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12967:76904_1:N:0:CAGATC Contig177544 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15831:76958_1:N:0:CAGATC Contig109985 1715 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16064:79095_1:N:0:CAGATC Contig240979 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4081:81318_1:N:0:CAGATC Contig528998 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18684:83905_1:N:0:CAGATC Contig51480 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13411:84523_1:N:0:CAGATC Contig386531 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18715:88652_1:N:0:CAGATC Contig62458 22412 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9668:89284_1:N:0:CAGATC Contig198212 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:21123:92741_1:N:0:CAGATC Contig74147 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5365:93590_1:N:0:CAGATC Contig425444 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7963:94090_1:N:0:CAGATC Contig267721 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5570:95725_1:N:0:CAGATC Contig104193 3773 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15038:97170_1:N:0:CAGATC Contig313428 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16638:97121_1:N:0:CAGATC Contig61552 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5931:98132_1:N:0:CAGATC Contig119371 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1266:98986_1:N:0:CAGATC Contig526224 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2419:100032_1:N:0:CAGATC Contig557664 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9274:100532_1:N:0:CAGATC Contig199793 399 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10340:4853_1:N:0:CAGATC Contig607197 112 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20069:5879_1:N:0:CAGATC Contig158513 734 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8891:7908_1:N:0:CAGATC Contig450133 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10176:9988_1:N:0:CAGATC Contig29305 42964 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11969:12892_1:N:0:CAGATC Contig36800 32946 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18575:13881_1:N:0:CAGATC Contig171856 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9571:14067_1:N:0:CAGATC Contig129490 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7434:15986_1:N:0:CAGATC Contig500200 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6106:17654_1:N:0:CAGATC Contig541863 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15881:17985_1:N:0:CAGATC Contig59947 3809 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4374:19452_1:N:0:CAGATC Contig660461 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1665:21793_1:N:0:CAGATC Contig191906 812 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13120:22161_1:N:0:CAGATC Contig450042 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18725:22664_1:N:0:CAGATC Contig585458 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5148:23126_1:N:0:CAGATC Contig518735 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16004:24296_1:N:0:CAGATC Contig379766 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12713:24739_1:N:0:CAGATC Contig40459 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9659:25485_1:N:0:CAGATC Contig2627 4914 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10364:26646_1:N:0:CAGATC Contig116847 799 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3323:27511_1:N:0:CAGATC Contig181870 806 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17261:28110_1:N:0:CAGATC Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6556:29774_1:N:0:CAGATC Contig309213 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9113:30542_1:N:0:CAGATC Contig365270 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12608:30538_1:N:0:CAGATC Contig234312 138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20590:33746_1:N:0:CAGATC Contig285015 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17949:33778_1:N:0:CAGATC Contig270296 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18199:33771_1:N:0:CAGATC Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9392:35213_1:N:0:CAGATC Contig210378 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6529:35708_1:N:0:CAGATC Contig140093 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16894:37003_1:N:0:CAGATC Contig676640 299 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6372:38319_1:N:0:CAGATC Contig612874 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7482:38758_1:N:0:CAGATC Contig322366 1336 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21252:38844_1:N:0:CAGATC Contig339383 110 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18060:40886_1:N:0:CAGATC Contig308706 264 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4498:44209_1:N:0:CAGATC Contig358523 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5375:45102_1:N:0:CAGATC Contig279368 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8599:45699_1:N:0:CAGATC Contig161646 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4126:47107_1:N:0:CAGATC Contig304675 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14002:47679_1:N:0:CAGATC Contig107806 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4734:48608_1:N:0:CAGATC Contig622946 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9090:49268_1:N:0:CAGATC Contig418309 229 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6087:51448_1:N:0:CAGATC Contig644742 177 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12361:51628_1:N:0:CAGATC Contig650526 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10185:52956_1:N:0:CAGATC Contig3564 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19111:53025_1:N:0:CAGATC Contig9393 3227 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7297:55437_1:N:0:CAGATC Contig513860 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11816:55324_1:N:0:AAGATC Contig486225 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15752:56459_1:N:0:CAGATC Contig38356 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1174:56979_1:N:0:CAGATC Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1289:56857_1:N:0:CAGATC Contig14122 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4054:58387_1:N:0:CAGATC Contig214773 692 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3368:58756_1:N:0:CAGATC Contig485297 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16907:58855_1:N:0:CAGATC Contig12444 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7747:59550_1:N:0:CAGATC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13980:62752_1:N:0:CAGATC Contig421427 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2373:64821_1:N:0:CAGATC Contig671433 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19310:64817_1:N:0:CAGATC Contig298402 192 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2372:66070_1:N:0:CAGATC Contig302307 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16542:66422_1:N:0:CAGATC Contig314583 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2944:67859_1:N:0:CAGATC Contig553789 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15655:68313_1:N:0:CAGATC Contig560849 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11576:69326_1:N:0:CAGATC Contig166282 710 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21041:69644_1:N:0:CAGATC Contig199610 756 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3492:69842_1:N:0:CAGATC Contig52506 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1853:71097_1:N:0:CAGATC Contig4954 3350 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11924:73381_1:N:0:CAGATC Contig160526 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11716:73869_1:N:0:CAGATC Contig218481 19424 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9632:76014_1:N:0:CAGATC Contig525964 153 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2875:78388_1:N:0:CAGATC Contig305829 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3012:78517_1:N:0:CAGATC Contig56604 8881 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19756:78602_1:N:0:CAGATC Contig94182 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4357:78987_1:N:0:CAGATC Contig182431 2326 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16231:82731_1:N:0:CAGATC Contig388838 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12271:82828_1:N:0:CAGATC Contig159001 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15498:84403_1:N:0:CAGATC Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6506:86788_1:N:0:CAGATC Contig584062 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1377:87371_1:N:0:CAGATC Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15951:88110_1:N:0:CAGATC Contig131550 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12900:88631_1:N:0:CAGATC Contig612800 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17625:89170_1:N:0:CAGATC Contig163100 143 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19964:90306_1:N:0:CAGATC Contig384516 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5455:90887_1:N:0:CAGATC Contig239687 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5296:91722_1:N:0:CAGATC Contig424115 199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8507:92662_1:N:0:CAGATC Contig362708 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:21295:92581_1:N:0:CAGATC Contig62412 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:13842:93945_1:N:0:CAGATC Contig32693 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15163:94077_1:N:0:CAGATC Contig515754 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8232:94313_1:N:0:AAGATC Contig627510 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1161:94706_1:N:0:CAGATC Contig198821 453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3359:96244_1:N:0:CAGATC Contig183601 897 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14929:96083_1:N:0:CAGATC Contig505072 123 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11417:97836_1:N:0:CAGATC Contig117986 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:15312:99802_1:N:0:CAGATC Contig142429 5614 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20065:99808_1:N:0:CAGATC Contig403003 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:4097:100088_1:N:0:CAGATC Contig179343 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6830:2968_1:N:0:CAGATC Contig350219 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6841:3906_1:N:0:CAGATT Contig289669 367 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18039:4143_1:N:0:CAGATC Contig50993 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11812:5383_1:N:0:CAGATC Contig311656 513 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20456:8093_1:N:0:CAGATC Contig22790 42527 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3040:8429_1:N:0:CAGATC Contig247118 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1112:9378_1:N:0:CAGATC Contig449107 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15491:9758_1:N:0:CAGATC Contig88480 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18742:10190_1:N:0:CAGATC Contig270141 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7694:12534_1:N:0:CAGATC Contig414714 382 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4894:15413_1:N:0:CAGATC Contig49054 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7070:16032_1:N:0:CAGATC Contig544071 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12217:16146_1:N:0:CAGATC Contig393930 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5036:16736_1:N:0:CAGATC Contig553176 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6491:17000_1:N:0:CAGATC Contig22900 28604 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14928:18650_1:N:0:CAGATC Contig285722 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15558:18603_1:N:0:CAGATC Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8234:18940_1:N:0:CAGATC Contig99728 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16633:18872_1:N:0:CAGATC Contig489787 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11489:19559_1:N:0:CAGATC Contig302736 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15435:20901_1:N:0:CAGATC Contig60735 11993 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7348:21369_1:N:0:CAGATC Contig50928 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1803:24527_1:N:0:CAGATC Contig4802 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6449:24928_1:N:0:CAGATC Contig290 36267 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8846:25707_1:N:0:CAGATC Contig358024 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9244:26015_1:N:0:CAGATC Contig372285 622 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3572:26626_1:N:0:CAGATC Contig48874 142 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14686:26587_1:N:0:CAGATC Contig65414 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6595:26951_1:N:0:CAGATC Contig329999 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15365:28183_1:N:0:CAGATC Contig629035 119 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9762:29257_1:N:0:CAGATC Contig33618 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6994:30088_1:N:0:CAGATC Contig65273 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2079:30449_1:N:0:CAGATC Contig309400 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9602:30281_1:N:0:CAGATC Contig204568 584 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7472:31175_1:N:0:CAGATC Contig136171 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17816:31107_1:N:0:CAGATC Contig543512 111 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13669:33018_1:N:0:CAGATC Contig169163 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2428:35928_1:N:0:CAGATC Contig443448 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10396:36704_1:N:0:CAGATC Contig689481 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3466:39100_1:N:0:CAGATC Contig36851 1100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9192:39060_1:N:0:CAGATC Contig99727 1982 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16869:40324_1:N:0:CAGATC Contig253455 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15056:41790_1:N:0:CAGATC Contig644585 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8381:42239_1:N:0:CAGATC Contig100960 9393 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19022:42077_1:N:0:CAGATC Contig22932 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16099:42330_1:N:0:CAGATC Contig550703 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20599:42351_1:N:0:CAGATC Contig140341 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8017:42763_1:N:0:CAGATC Contig657935 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8009:42799_1:N:0:CAGATC Contig437990 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:21234:44336_1:N:0:CAGATC Contig58714 5612 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:5863:44553_1:N:0:CAGATC Contig26636 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16368:45750_1:N:0:CAGATC Contig603912 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:15399:46228_1:N:0:CAGATC Contig227291 126 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2068:47593_1:N:0:CAGATC Contig348010 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14440:47615_1:N:0:CAGATC Contig635185 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12298:48145_1:N:0:CAGATC Contig237165 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2887:50415_1:N:0:CAGATC Contig685495 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3120:50845_1:N:0:CAGATC Contig92483 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7864:51044_1:N:0:CAGATC Contig2335 8526 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7590:51562_1:N:0:CAGATC Contig530378 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8494:54155_1:N:0:CAGATC Contig17147 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:21084:55081_1:N:0:CAGATC Contig155759 727 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8065:55686_1:N:0:CAGATC Contig158704 1089 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3443:56100_1:N:0:CAGATC Contig457 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:2338:56521_1:N:0:CAGATC Contig181832 470 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6040:56817_1:N:0:CAGATC Contig177395 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19407:57066_1:N:0:CAGATC Contig53330 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6088:57656_1:N:0:CAGATC Contig1221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11943:59912_1:N:0:CAGATC Contig86960 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20740:66059_1:N:0:CAGATC Contig544405 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3993:67827_1:N:0:CAGATC Contig101697 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3283:68037_1:N:0:CAGATC Contig567272 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10845:68404_1:N:0:CAGATC Contig88172 2575 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:11007:70290_1:N:0:CAGATC Contig657344 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:3059:71317_1:N:0:CAGATC Contig607338 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6351:71295_1:N:0:CAGATC Contig548402 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8948:73873_1:N:0:CAGATC Contig462227 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:9131:73803_1:N:0:CAGATC Contig387502 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17653:74578_1:N:0:CAGATC Contig113399 883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7127:76826_1:N:0:CAGATC Contig225448 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1155:78829_1:N:0:CAGATC Contig360304 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10124:80801_1:N:0:CAGATC Contig611463 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:14434:81411_1:N:0:CAGATC Contig371693 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:10560:81778_1:N:0:CAGATC Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:16521:82639_1:N:0:CAGATC Contig193874 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1932:83303_1:N:0:CAGATC Contig585966 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:20235:83274_1:N:0:CAGATC Contig133326 1997 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:4716:85015_1:N:0:CAGATC Contig6988 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:1543:85562_1:N:0:CAGATC Contig398696 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19277:88021_1:N:0:CAGATC Contig266248 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:8035:89126_1:N:0:CAGATC Contig355919 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:13400:89419_1:N:0:CAGATC Contig199840 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19469:90135_1:N:0:CAGATC Contig92902 1698 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:17400:91358_1:N:0:CAGATC Contig155164 545 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7944:91629_1:N:0:CAGATC Contig611377 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:7573:91754_1:N:0:CAGATC Contig194115 718 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19517:91857_1:N:0:CAGATC Contig348416 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:6322:92364_1:N:0:CAGATC Contig580994 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:19061:92786_1:N:0:CAGATC Contig288215 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:12434:94481_1:N:0:CAGATC Contig577378 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1109:18358:100861_1:N:0:CAGATC Contig280315 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:15945:7078_1:N:0:CAGATC Contig279416 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:5104:8612_1:N:0:CAGATC Contig122733 778 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:5108:8649_1:N:0:CAGATC Contig122733 778 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1488:10260_1:N:0:CAGATC Contig471305 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:9381:10305_1:N:0:CAGATC Contig163869 906 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3022:12068_1:N:0:CAGATC Contig429259 152 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:6168:16576_1:N:0:CAGATC Contig464445 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:10946:18259_1:N:0:CAGATC Contig149320 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20608:18486_1:N:0:CAGATC Contig22733 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19958:19620_1:N:0:CAGATC Contig635185 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:20364:27015_1:N:0:CAGATC Contig14139 580 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3359:28386_1:N:0:CAGATC Contig129461 2287 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19844:28747_1:N:0:CAGATC Contig83491 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:13326:34693_1:N:0:CAGATC Contig8416 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:15056:34865_1:N:0:CAGATC Contig362504 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:11198:36072_1:N:0:CAGATC Contig306797 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19848:37291_1:N:0:CAGATC Contig58012 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:10058:37535_1:N:0:CAGATC Contig342029 1007 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7960:37793_1:N:0:CAGATC Contig668942 116 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:16305:39929_1:N:0:CTGATC Contig569410 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:17364:40887_1:N:0:CAGATC Contig658316 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:9504:43061_1:N:0:CAGATC Contig584047 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:18176:43058_1:N:0:CAGATC Contig126469 3534 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3128:43888_1:N:0:CAGATC Contig410242 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:4944:44496_1:N:0:CAGATC Contig129550 1817 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:11481:44456_1:N:0:CAGATC Contig641882 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:17787:44579_1:N:0:CAGATC Contig194567 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:5624:45842_1:N:0:CAGATC Contig631822 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:3652:46437_1:N:0:CAGATC Contig121089 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:9968:46402_1:N:0:CAGATC Contig347240 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1295:47082_1:N:0:CAGATC Contig298952 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:19360:49684_1:N:0:CAGATC Contig315535 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:1322:51155_1:N:0:CAGATC Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:13551:51263_1:N:0:CAGATC Contig372251 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1110:7476:51979_1:N:0:CAGATC Contig499153 2 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 789729 (78.97%) aligned 0 times 109390 (10.94%) aligned exactly 1 time 100881 (10.09%) aligned >1 times 21.03% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 790654 (79.07%) aligned 0 times 109163 (10.92%) aligned exactly 1 time 100183 (10.02%) aligned >1 times 20.93% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 363505 (36.35%) aligned 0 times 217143 (21.71%) aligned exactly 1 time 419352 (41.94%) aligned >1 times 63.65% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 364317 (36.43%) aligned 0 times 217675 (21.77%) aligned exactly 1 time 418008 (41.80%) aligned >1 times 63.57% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 7_CAGATC_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 7_CAGATC_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 399253 Mapping efficiency: 39.9% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2240351 Total methylated C's in CpG context: 85343 Total methylated C's in CHG context: 5305 Total methylated C's in CHH context: 115204 Total methylated C's in Unknown context: 41 Total unmethylated C's in CpG context: 216476 Total unmethylated C's in CHG context: 407466 Total unmethylated C's in CHH context: 1410557 Total unmethylated C's in Unknown context: 341 C methylated in CpG context: 28.3% C methylated in CHG context: 1.3% C methylated in CHH context: 7.6% C methylated in Unknown context (CN or CHN): 10.7% Bismark completed in 0d 2h 32m 28s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/8_ACTTGA_L001_R1_001_trimmed.fq.gz Writing a C -> T converted version of the input file 8_ACTTGA_L001_R1_001_trimmed.fq.gz to 8_ACTTGA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file 8_ACTTGA_L001_R1_001_trimmed.fq.gz to 8_ACTTGA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file 8_ACTTGA_L001_R1_001_trimmed.fq.gz (1000001 sequences in total) Input files are 8_ACTTGA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 8_ACTTGA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from 8_ACTTGA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1195:2170_1:N:0:ACTTGA 0 Contig21564_CT_converted 3496 1 30M * 0 0 ATTTGTAGTTTTTTATTGGTAATGGTGATG HHHJJFFHIHJJJJGJJIICCEIII?FFHI AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU Now starting the Bowtie 2 aligner for CTreadGAgenome (reading in sequences from 8_ACTTGA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1195:2170_1:N:0:ACTTGA 16 Contig1080_GA_converted 13756 1 30M * 0 0 CATCACCATTACCAATAAAAAACTACAAAT IHFF?IIIECCIIJJGJJJJHIHFFJJHHH AS:i:0 XS:i:0 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU Now starting the Bowtie 2 aligner for GAreadCTgenome (reading in sequences from 8_ACTTGA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --nofw) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1195:2170_1:N:0:ACTTGA 4 * 0 0 * * 0 0 ATTTATAATTTTTTATTAATAATAATAATA HHHJJFFHIHJJJJGJJIICCEIII?FFHI YT:Z:UU Now starting the Bowtie 2 aligner for GAreadGAgenome (reading in sequences from 8_ACTTGA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/GA_conversion/BS_GA Found first alignment: HWI-D00743:54:C8MOMACXX:1:1101:1195:2170_1:N:0:ACTTGA 4 * 0 0 * * 0 0 ATTTATAATTTTTTATTAATAATAATAATA HHHJJFFHIHJJJJGJJIICCEIII?FFHI YT:Z:UU >>> Writing bisulfite mapping results to 8_ACTTGA_L001_R1_001_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/8_ACTTGA_L001_R1_001_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11046:2219_1:N:0:ACTTGA Contig13204 94 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15912:2994_1:N:0:ACTTGA Contig60519 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14923:3437_1:N:0:ACTTGA Contig252861 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5382:5215_1:N:0:ACTTGA Contig369739 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7853:5386_1:N:0:ACTTGA Contig427273 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20064:5664_1:N:0:ACTTGA Contig675953 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13711:7107_1:N:0:ACTTGA Contig500182 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16110:8041_1:N:0:ACTTGA Contig273708 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4049:8514_1:N:0:ACTTGA Contig309400 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11403:11448_1:N:0:ACTTGA Contig645250 115 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7307:14500_1:N:0:ACTTGA Contig346148 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2077:14868_1:N:0:ACTTGA Contig260431 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7757:15393_1:N:0:ACTTGA Contig489494 98 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4927:15839_1:N:0:ACTTGA Contig297416 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4951:16978_1:N:0:ACTTGA Contig109450 6129 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10839:16881_1:N:0:ACTTGA Contig217325 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6702:17868_1:N:0:ACTTGA Contig361366 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10716:20520_1:N:0:ACTTGA Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7507:21103_1:N:0:ACTTGA Contig335108 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14347:22130_1:N:0:ACTTGA Contig395184 113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10434:22349_1:N:0:ACTTGA Contig38054 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19749:22871_1:N:0:ACTTGA Contig695158 209 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6927:23766_1:N:0:ACTTGA Contig642621 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19493:24857_1:N:0:ACTTGA Contig67905 4362 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6261:25174_1:N:0:ACTTGA Contig508285 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3912:26940_1:N:0:ACTTGA Contig67855 5865 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18440:26887_1:N:0:ACTTGA Contig468750 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12141:27149_1:N:0:ACTTGA Contig271370 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15093:27410_1:N:0:ACTTGA Contig287273 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20549:27389_1:N:0:ACTTGA Contig464788 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17490:27654_1:N:0:ACTTGA Contig598672 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13079:29081_1:N:0:ACTTGA Contig506272 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16395:29490_1:N:0:ACTTGA Contig474432 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5593:29545_1:N:0:ACTTGA Contig337663 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6167:29644_1:N:0:ACTTGA Contig400928 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17247:31985_1:N:0:ACTTGA Contig57450 4548 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4822:32074_1:N:0:ACTTGA Contig285402 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19810:33875_1:N:0:ACTTGA Contig635580 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19758:35361_1:N:0:ACTTGA Contig176064 507 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17993:37213_1:N:0:ACTTGA Contig143583 4038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19930:38058_1:N:0:ACTTGA Contig481475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2755:39479_1:N:0:ACTTGA Contig665327 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9224:39360_1:N:0:ACTTGA Contig177396 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16060:39891_1:N:0:ACTTGA Contig407555 174 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14795:41990_1:N:0:ACTTGA Contig12865 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17491:42340_1:N:0:ACTTGA Contig122243 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9899:43317_1:N:0:ACTTGA Contig284248 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12611:43425_1:N:0:ACTTGA Contig206975 348 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4316:43782_1:N:0:ACTTGA Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16399:45941_1:N:0:ACTTGA Contig76605 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15136:46276_1:N:0:ACTTGA Contig635923 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16926:46315_1:N:0:ACTTGA Contig664243 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13328:48310_1:N:0:ACTTGA Contig209389 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12667:48585_1:N:0:ACTTGA Contig352929 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8414:49141_1:N:0:ACTTGA Contig213739 1425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15385:50301_1:N:0:ACTTGA Contig623754 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21187:51797_1:N:0:ACTTGA Contig62730 10860 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19377:52177_1:N:0:ACTTGA Contig4002 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4137:52670_1:N:0:ACTTGA Contig16362 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4225:52950_1:N:0:ACTTGA Contig695001 275 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19969:52800_1:N:0:ACTTGA Contig410899 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21071:53257_1:N:0:ACTTGA Contig117248 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10743:55344_1:N:0:ACTTGA Contig97562 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10771:55313_1:N:0:ACTTGA Contig97562 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8056:56092_1:N:0:ACTTGA Contig252221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21193:56719_1:N:0:ACTTGA Contig71056 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:12357:57380_1:N:0:ACTTGA Contig189110 436 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18693:59343_1:N:0:ACTTGA Contig418836 1096 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4185:60180_1:N:0:ACTCGA Contig69479 8278 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8336:61109_1:N:0:ACTTGA Contig129205 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11947:61631_1:N:0:ACTTGA Contig67856 3586 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:6935:61846_1:N:0:ACTTGA Contig88172 2576 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:19562:63610_1:N:0:ACTTGA Contig127290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:15469:64285_1:N:0:ACTTGA Contig18922 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16256:65481_1:N:0:ACTTGA Contig151343 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:1820:66186_1:N:0:ACTTGA Contig172193 443 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7557:66088_1:N:0:ACTTGA Contig375270 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10395:66187_1:N:0:ACTTGA Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9544:67057_1:N:0:ACTTGA Contig326441 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13101:67560_1:N:0:ACTTGA Contig451241 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2622:68215_1:N:0:ACTTGA Contig626907 113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18773:68572_1:N:0:ACTTGA Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16794:70040_1:N:0:ACTTGA Contig610369 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8933:71089_1:N:0:ACTTGA Contig101999 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:20179:72406_1:N:0:ACTTGA Contig659868 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2474:72671_1:N:0:ACTTGA Contig686746 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:8939:74230_1:N:0:ACTTGA Contig226281 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4656:75393_1:N:0:ACTTGA Contig245017 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9146:76839_1:N:0:ACTTGA Contig179998 215 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:7944:77059_1:N:0:ACTTGA Contig335108 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10773:77482_1:N:0:ACTTGA Contig684976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16459:79941_1:N:0:ACTTGA Contig367413 167 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18873:81433_1:N:0:ACTTGA Contig396501 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10269:81987_1:N:0:ACTTGA Contig100960 9393 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21124:82882_1:N:0:ACTTGA Contig1166 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:18633:83034_1:N:0:ACTTGA Contig258517 162 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:13569:85257_1:N:0:ACTTGA Contig14864 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:10452:85639_1:N:0:ACTTGA Contig144517 874 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17597:85923_1:N:0:ACTTGA Contig87376 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:2433:86129_1:N:0:ACTTGA Contig541262 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:4617:86522_1:N:0:ACTTGA Contig331942 168 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:9934:87235_1:N:0:ACTTGA Contig478968 168 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:16615:87129_1:N:0:ACTTGA Contig90864 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:11270:91265_1:N:0:ACTTGA Contig20397 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14736:92886_1:N:0:ACTTGA Contig662506 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:17094:93394_1:N:0:ACTTGA Contig635164 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3769:93687_1:N:0:ACTTGA Contig314337 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:21108:94324_1:N:0:ACTTGA Contig129205 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:3299:94528_1:N:0:ACTTGA Contig124743 837 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:5424:96232_1:N:0:ACTTGA Contig59736 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1101:14972:97718_1:N:0:ACTTGA Contig292770 225 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5279:2396_1:N:0:ACTTGA Contig636059 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9553:2844_1:N:0:ACTTGA Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1600:4047_1:N:0:ACTTGA Contig386531 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19461:6904_1:N:0:ACTTGA Contig368331 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20611:6817_1:N:0:ACTTGA Contig406952 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7450:7338_1:N:0:ACTTGA Contig467114 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8880:8482_1:N:0:ACTTGA Contig635670 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14312:9312_1:N:0:ACTTGA Contig459573 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2029:10410_1:N:0:ACTTGA Contig132511 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2846:11470_1:N:0:ACTTGA Contig56752 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5232:11843_1:N:0:ACTTGA Contig17052 14111 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6571:12784_1:N:0:ACTTGA Contig163360 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8543:13314_1:N:0:ACTTGA Contig67856 3585 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17600:13916_1:N:0:ACTTGA Contig37909 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20088:14174_1:N:0:ACTTGA Contig396401 133 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16249:14656_1:N:0:ACTTGA Contig178183 950 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5853:15054_1:N:0:ACTTGA Contig438716 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20885:15450_1:N:0:ACTTGA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21015:15930_1:N:0:ACTTGA Contig538290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8034:17611_1:N:0:ACTTGA Contig428568 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13355:18655_1:N:0:ACTTGA Contig686207 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6873:18882_1:N:0:ACTTGA Contig233630 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20701:19938_1:N:0:ACTTGA Contig280728 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1703:21540_1:N:0:ACTTGA Contig342233 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4487:21808_1:N:0:ACTTGA Contig329043 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10586:22352_1:N:0:ACTTGA Contig384454 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18299:22288_1:N:0:ACTTGA Contig541147 118 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1977:24709_1:N:0:ACTTGA Contig264623 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4548:24650_1:N:0:ACTTGA Contig625372 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4665:25823_1:N:0:ACTTGA Contig92446 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6121:27749_1:N:0:ACTTGA Contig285268 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6070:27924_1:N:0:ACTTGA Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2565:28826_1:N:0:ACTTGA Contig357236 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3643:29044_1:N:0:ACTTGA Contig380138 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2412:29312_1:N:0:ACTTGA Contig129326 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16559:30109_1:N:0:ACTTGA Contig601013 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6582:31251_1:N:0:ACTTGA Contig296507 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1133:32295_1:N:0:ACTTGA Contig360581 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:20032:32279_1:N:0:ACTTGA Contig233470 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5001:34670_1:N:0:ACTTGA Contig66645 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16288:35195_1:N:0:ACTTGA Contig178534 1614 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16729:36135_1:N:0:ACTTGA Contig111906 10509 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10214:37968_1:N:0:ACTTGA Contig690156 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18528:37936_1:N:0:ACTTGA Contig77762 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3930:40542_1:N:0:ACTTGA Contig402077 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4533:40860_1:N:0:ACTTGA Contig98478 1573 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13485:43495_1:N:0:ACTTGA Contig19038 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5734:43748_1:N:0:ACTTGA Contig466298 235 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12442:46720_1:N:0:AATTGA Contig182247 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14716:47557_1:N:0:ACTTGA Contig91752 1445 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18645:48643_1:N:0:ACTTGA Contig373844 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8768:49328_1:N:0:ACTTGA Contig420565 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16176:49508_1:N:0:ACTTGA Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3448:49853_1:N:0:ACTTGA Contig378309 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6807:50132_1:N:0:ACTTGA Contig546343 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1095:50650_1:N:0:ACTTGA Contig631738 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3757:50864_1:N:0:ACTTGA Contig651219 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14462:52843_1:N:0:ACTTGA Contig459337 196 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21216:53065_1:N:0:ACTTGA Contig27277 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12869:53705_1:N:0:ACTTGA Contig112264 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8950:53884_1:N:0:ACTTGA Contig644976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:9150:54637_1:N:0:ACTTGA Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17886:55228_1:N:0:ACTTGA Contig629899 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17039:55788_1:N:0:ACTTGA Contig22824 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:7724:57521_1:N:0:ACTTGA Contig611330 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18879:57527_1:N:0:ACTTGA Contig603854 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5720:57877_1:N:0:ACTTGA Contig129461 2288 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6091:58312_1:N:0:ACTTGA Contig655728 245 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2376:61382_1:N:0:ACTTGA Contig63670 4695 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17988:61701_1:N:0:ACTTGA Contig361693 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19156:62207_1:N:0:ACTTGA Contig174765 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17117:62824_1:N:0:ACTTGA Contig446602 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:11238:63323_1:N:0:ACTTGA Contig689197 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15132:67439_1:N:0:ACTTGA Contig126564 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19330:68108_1:N:0:ACTTGA Contig620148 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13983:68864_1:N:0:ACTTGA Contig542159 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19229:69106_1:N:0:ACTTGA Contig15118 290 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21131:70121_1:N:0:ACTTGA Contig479154 974 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10117:71892_1:N:0:ACTTGA Contig47220 13047 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:19139:72329_1:N:0:ACTTGA Contig537474 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3218:73631_1:N:0:ACTTGA Contig393239 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8203:73874_1:N:0:ACTTGA Contig530919 124 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13720:73913_1:N:0:ACTTGA Contig137089 1038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17988:73848_1:N:0:ACTTGA Contig103001 2539 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5416:74442_1:N:0:ACTTGA Contig164559 869 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:21030:75570_1:N:0:ACTTGA Contig447780 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4812:75907_1:N:0:ACTTGA Contig572699 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3006:78588_1:N:0:ACTTGA Contig178183 951 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18542:78849_1:N:0:ACTTGA Contig91185 7580 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:6793:79216_1:N:0:ACTTGA Contig118590 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8100:81565_1:N:0:ACTTGA Contig282623 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:13543:82767_1:N:0:ACTTGA Contig139860 9827 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2729:85046_1:N:0:ACTTGA Contig468213 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:12337:85951_1:N:0:ACTTGA Contig344566 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:17218:85940_1:N:0:ACTTGA Contig22195 117 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:5160:86153_1:N:0:ACTTGA Contig383627 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:10452:86472_1:N:0:ACTTGA Contig685584 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:18120:86905_1:N:0:ACTTGA Contig358282 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14997:87128_1:N:0:ACTTGA Contig66441 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:14717:87789_1:N:0:ACTTGA Contig157306 619 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:1666:88362_1:N:0:ACTTGA Contig108531 6142 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:15833:91682_1:N:0:ACTTGA Contig569924 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4231:92279_1:N:0:ACTTGA Contig625928 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:3674:95917_1:N:0:ACTTGA Contig101880 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:2758:97575_1:N:0:ACTTGA Contig100635 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8310:98865_1:N:0:ACTTGA Contig552809 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:16548:98886_1:N:0:ACTTGA Contig298563 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:4938:99207_1:N:0:ACTTGA Contig212711 416 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1102:8899:99269_1:N:0:ACTTGA Contig80432 1801 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5670:5967_1:N:0:ACTTGA Contig560816 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:21077:7152_1:N:0:ACTTGA Contig497265 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7799:7942_1:N:0:ACTTGA Contig25781 13565 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15218:9362_1:N:0:ACTTGA Contig336336 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14097:9805_1:N:0:ACTTGA Contig260095 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14367:9967_1:N:0:ACTTGA Contig603811 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2473:12214_1:N:0:ACTTGA Contig622774 247 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3240:12386_1:N:0:ACTTGA Contig152502 805 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5447:13034_1:N:0:ACTTGA Contig32023 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3836:13949_1:N:0:ACTTGA Contig306995 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17389:14228_1:N:0:ACTTGA Contig555181 137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19931:15756_1:N:0:ACTTGA Contig203707 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20710:16390_1:N:0:ACTTGA Contig685294 89 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:1817:16623_1:N:0:ACTTGA Contig651867 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2123:16703_1:N:0:ACTTGA Contig11769 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18902:16929_1:N:0:ACTTGA Contig299128 107 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7594:17757_1:N:0:ACTTGA Contig16478 16161 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12290:17839_1:N:0:ACTTGA Contig37790 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17871:18065_1:N:0:ACTTGA Contig492344 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7873:18768_1:N:0:ACTTGA Contig565572 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12485:21863_1:N:0:ACTTGA Contig133832 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8756:23742_1:N:0:ACTTGA Contig575554 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20770:27113_1:N:0:ACTTGA Contig33867 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19108:27636_1:N:0:ACTTGA Contig53168 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17118:28282_1:N:0:ACTTGA Contig557687 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13047:28627_1:N:0:ACTTGA Contig349983 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2874:30744_1:N:0:ACTTGA Contig667583 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4446:30623_1:N:0:ACTTGA Contig496057 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16809:32546_1:N:0:ACTTGA Contig141090 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10650:32943_1:N:0:ACTTGA Contig570998 152 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18991:34388_1:N:0:ACTTGA Contig597713 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4050:36110_1:N:0:ACTTGA Contig260676 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13918:38650_1:N:0:ACTTGA Contig56667 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19223:40689_1:N:0:ACTTGA Contig84797 4902 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19187:41373_1:N:0:ACTTGA Contig657549 151 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7459:41711_1:N:0:ACTTGA Contig301519 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10421:43777_1:N:0:ACTTGA Contig252813 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17981:44414_1:N:0:ACTTGA Contig72633 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18724:46155_1:N:0:ACTTGA Contig676062 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2513:46931_1:N:0:ACTTGA Contig52440 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:3557:46781_1:N:0:ACTTGA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10346:46955_1:N:0:ACTTGA Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18931:48044_1:N:0:ACTTGA Contig4674 8208 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5467:49676_1:N:0:ACTTGA Contig578666 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8709:49634_1:N:0:ACTTGA Contig535093 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10286:50121_1:N:0:ACTTGA Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17368:51663_1:N:0:ACTTGA Contig421726 347 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17270:52268_1:N:0:ACTTGA Contig295853 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8532:52920_1:N:0:ACTTGA Contig437627 106 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:8961:56300_1:N:0:ACTTGA Contig250216 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20231:57224_1:N:0:ACTTGA Contig481475 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20119:57405_1:N:0:ACTTGA Contig411953 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:19828:57862_1:N:0:ACTTGA Contig654843 131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:16410:59129_1:N:0:ACTTGA Contig24029 6625 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10878:62650_1:N:0:ACTTGA Contig587858 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14400:63917_1:N:0:ACTTGA Contig399177 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9184:64229_1:N:0:ACTTGA Contig129205 1028 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:18108:64263_1:N:0:ACTTGA Contig315316 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4474:64562_1:N:0:ACTTGA Contig45848 21323 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:5318:65108_1:N:0:ACTTGA Contig243367 151 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2739:65667_1:N:0:ACTTGA Contig466581 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17117:67094_1:N:0:ACTTGA Contig8344 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2315:68198_1:N:0:ACTTGA Contig79892 1385 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9392:69240_1:N:0:ACTTGA Contig107277 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11657:71260_1:N:0:ACTTGA Contig92624 5610 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15803:71992_1:N:0:ACTTGA Contig329075 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14976:72837_1:N:0:ACTTGA Contig114613 1983 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13538:76966_1:N:0:ACTTGA Contig55481 13576 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:13847:76765_1:N:0:ACTTGA Contig13177 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15729:76878_1:N:0:ACTTGA Contig671690 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:2799:77067_1:N:0:ACTTGA Contig637452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12017:78698_1:N:0:ACTTGA Contig119377 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15350:78807_1:N:0:ACTTGA Contig186634 405 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10356:79796_1:N:0:ACTTGA Contig123949 1529 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7562:80409_1:N:0:ACTTGA Contig315471 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:9859:82402_1:N:0:ACTTGA Contig568956 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:14139:83486_1:N:0:ACTTGA Contig160049 2375 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:4335:84133_1:N:0:ACTTGA Contig478015 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15141:84611_1:N:0:ACTTGA Contig333575 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12160:86462_1:N:0:ACTTGA Contig436014 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20842:86314_1:N:0:ACTTGA Contig483851 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10856:88620_1:N:0:ACTTGA Contig127394 5048 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:7140:91321_1:N:0:ACTTGA Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15312:91498_1:N:0:ACTTGA Contig481080 97 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15322:94336_1:N:0:ACTTGA Contig351673 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:12057:95300_1:N:0:ACTTGA Contig2939 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:17037:95644_1:N:0:ACTTGA Contig49832 9867 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:11432:96146_1:N:0:ACTTGA Contig415383 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:15325:96341_1:N:0:ACTTGA Contig556535 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:20992:96361_1:N:0:ACTTGA Contig606852 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1103:10094:100172_1:N:0:ACTTGA Contig329744 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16272:2194_1:N:0:ACTTGA Contig6964 3469 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9141:2693_1:N:0:ACTTGA Contig489528 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10410:2860_1:N:0:ACTTGA Contig571561 90 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13056:5190_1:N:0:ACTTGA Contig642946 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10703:5443_1:N:0:ACTTGA Contig571210 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8488:7002_1:N:0:ACTTGA Contig499215 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12284:7074_1:N:0:ACTTGA Contig421226 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18879:8629_1:N:0:ACTTGA Contig195358 234 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3420:8873_1:N:0:ACTTGA Contig40273 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21042:11670_1:N:0:ACTTGA Contig500144 130 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1220:12730_1:N:0:ACTTGA Contig208562 702 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11717:13160_1:N:0:ACTTGA Contig354619 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1522:14187_1:N:0:ACTTGA Contig449107 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17887:14103_1:N:0:ACTTGA Contig27685 13163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17015:14833_1:N:0:ACTTGA Contig489528 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2260:15561_1:N:0:ACTTGA Contig544593 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15979:16387_1:N:0:ACTTGA Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19243:18200_1:N:0:ACTTGA Contig168431 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2914:21364_1:N:0:ACTTGA Contig114922 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3254:22147_1:N:0:ACTTGA Contig19127 113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4950:22313_1:N:0:ACTTGA Contig542597 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15559:22889_1:N:0:ACTTGA Contig104854 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19405:22752_1:N:0:ACTTGA Contig72477 6739 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13086:25152_1:N:0:ACTTGA Contig7001 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1386:25281_1:N:0:ACTTGA Contig436073 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6825:26252_1:N:0:ACTTGA Contig120734 2359 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:11981:29443_1:N:0:ACTTGA Contig244716 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5386:29755_1:N:0:ACTTGA Contig677962 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9985:30344_1:N:0:ACTTGA Contig657875 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6926:31783_1:N:0:ACTTGA Contig291101 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19715:32074_1:N:0:ACTTGA Contig316569 236 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12260:32499_1:N:0:ACTTGA Contig51083 51428 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5120:33972_1:N:0:ACTTGA Contig396840 83 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2833:34124_1:N:0:ACTTGA Contig15331 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4032:35961_1:N:0:ACTTGA Contig104191 1629 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5367:36198_1:N:0:ACTTGA Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18078:37729_1:N:0:ACTTGA Contig9319 766 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8470:37967_1:N:0:ACTTGA Contig291553 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19491:38296_1:N:0:ACTTGA Contig84290 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10004:40123_1:N:0:ACTTGA Contig66645 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9528:40292_1:N:0:ACTTGA Contig12700 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13970:40273_1:N:0:ACTTGA Contig491818 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2406:41728_1:N:0:ACTTGA Contig100050 1070 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17268:42671_1:N:0:ACTTGA Contig3684 8964 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13146:43054_1:N:0:ACTTGA Contig440171 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5897:44275_1:N:0:ACTTGA Contig537026 497 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16132:48390_1:N:0:ACTTGA Contig231839 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1189:48567_1:N:0:ACTTGA Contig483165 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3690:49444_1:N:0:ACTTGA Contig70394 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17353:52086_1:N:0:ACTTGA Contig341474 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10876:53152_1:N:0:ACTTGA Contig30881 16619 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19383:54168_1:N:0:ACTTGA Contig80876 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21300:54105_1:N:0:ACTTGA Contig549480 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3291:55344_1:N:0:ACTTGA Contig633476 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12861:56573_1:N:0:ACTTGA Contig439879 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15108:56641_1:N:0:ACTTGA Contig215022 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16116:58092_1:N:0:ACTTGA Contig306044 193 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13002:58400_1:N:0:ACTTGA Contig634036 163 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17074:59453_1:N:0:ACTTGA Contig548202 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18910:59471_1:N:0:ACTTGA Contig470896 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15094:59586_1:N:0:ACTTGA Contig199248 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1709:60826_1:N:0:ACTTGA Contig6274 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:1858:62242_1:N:0:ACTTGA Contig179830 355 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14279:62331_1:N:0:ACTTGA Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5423:63052_1:N:0:ACTTGA Contig54238 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13895:63379_1:N:0:ACTTGA Contig444684 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16713:64978_1:N:0:ACTTGA Contig117820 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19287:65090_1:N:0:ACTTGA Contig513578 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:21105:65089_1:N:0:ACTTGA Contig140274 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14081:65520_1:N:0:ACTTGA Contig178270 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17607:66657_1:N:0:ACTTGA Contig68695 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3513:67778_1:N:0:ACTTGA Contig259222 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18705:68783_1:N:0:ACTTGA Contig294509 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18281:69363_1:N:0:ACTTGA Contig37634 164 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7923:70113_1:N:0:ACTTGA Contig77767 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12752:72747_1:N:0:ACTTGA Contig657910 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6066:73342_1:N:0:ACTTGA Contig322890 225 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:17020:73745_1:N:0:ACTTGA Contig20397 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18004:74089_1:N:0:ACTTGA Contig110263 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10452:74966_1:N:0:ACTTGA Contig60519 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20741:75426_1:N:0:ACTTGA Contig579039 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16857:76184_1:N:0:ACTTGA Contig633094 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8685:76901_1:N:0:ACTTGA Contig272666 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2175:79456_1:N:0:ACTTGA Contig472285 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7236:79396_1:N:0:ACTTGA Contig137364 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16464:79613_1:N:0:ACTTGA Contig99807 3834 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9290:80021_1:N:0:ACTTGA Contig325239 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9977:81802_1:N:0:ACTTGA Contig5974 8404 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:2120:82166_1:N:0:ACTTGA Contig674291 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7587:82884_1:N:0:ACTTGA Contig252623 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:5684:83025_1:N:0:ACTTGA Contig184175 3925 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19827:84060_1:N:0:ACTTGA Contig257710 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15549:84353_1:N:0:ACTTGA Contig67092 5393 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15623:84824_1:N:0:ACTTGA Contig9323 1624 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:7283:86181_1:N:0:ACTTGA Contig72295 29928 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13466:86454_1:N:0:ACTTGA Contig312813 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:3044:86884_1:N:0:ACTTGA Contig4012 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:13725:87441_1:N:0:ACTTGA Contig207323 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16407:87617_1:N:0:ACTTGA Contig649878 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:9265:87970_1:N:0:ACTTGA Contig180919 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20405:89317_1:N:0:ACTTGA Contig163960 894 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15744:89635_1:N:0:ACTTGA Contig98034 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15615:90671_1:N:0:ACTTGA Contig271925 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4074:90891_1:N:0:ACTTGA Contig593865 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:12600:91245_1:N:0:ACTTGA Contig258226 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16105:92845_1:N:0:ACTTGA Contig71505 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:20131:93788_1:N:0:ACTTGA Contig497555 157 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16453:94090_1:N:0:ACTTGA Contig438716 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18217:94942_1:N:0:ACTTGA Contig9971 827 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16861:95674_1:N:0:ACTTGA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:16866:95695_1:N:0:ACTTGA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4791:95892_1:N:0:ACTTGA Contig184175 3925 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6868:96614_1:N:0:ACTTGA Contig392759 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8647:97238_1:N:0:ACTTGA Contig689926 103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:4129:97578_1:N:0:ACTTGA Contig162940 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:19790:98150_1:N:0:ACTTGA Contig525099 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:8319:98706_1:N:0:ACTTGA Contig477443 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:15427:98628_1:N:0:ACTTGA Contig24080 4725 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:6117:98763_1:N:0:ACTTGA Contig291412 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:14709:99152_1:N:0:ACTTGA Contig436232 158 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:10784:99649_1:N:0:ACTTGA Contig34929 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1104:18767:99941_1:N:0:ACTTGA Contig481475 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16991:2519_1:N:0:ACTTGA Contig527575 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13779:2879_1:N:0:ACTTGA Contig4955 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3532:3890_1:N:0:ACTTGA Contig118398 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7851:3832_1:N:0:ACTTGA Contig271437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14787:4398_1:N:0:ACTTGA Contig580738 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12431:5315_1:N:0:ACTTGA Contig551111 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10459:5640_1:N:0:ACTTGA Contig503174 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15730:5629_1:N:0:ACTTGA Contig100635 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18753:5848_1:N:0:ACTTGA Contig26049 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2540:6385_1:N:0:ACTTGA Contig195358 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17962:6680_1:N:0:ACTTGA Contig99807 3834 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19684:7811_1:N:0:ACTTGA Contig353340 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11833:8967_1:N:0:ACTTGA Contig282268 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5275:9599_1:N:0:ACTTGA Contig12444 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14545:9589_1:N:0:ACTTGA Contig6714 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4398:10232_1:N:0:ACTTGA Contig685082 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16811:11735_1:N:0:ACTTGA Contig192018 469 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16534:11802_1:N:0:ACTTGA Contig636632 224 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15348:12581_1:N:0:ACTTGA Contig583579 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7171:14221_1:N:0:ACTTGA Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6600:15201_1:N:0:ACTTGA Contig551527 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10381:15463_1:N:0:ACTTGA Contig461985 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12396:15868_1:N:0:ACTTGA Contig597406 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10910:16482_1:N:0:ACTTGA Contig67821 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12499:18979_1:N:0:ACTTGA Contig686475 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4707:19052_1:N:0:ACTTGA Contig143392 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1711:19602_1:N:0:ACTTAA Contig641314 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19277:21022_1:N:0:ACTTGA Contig13945 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19930:21340_1:N:0:ACTTGA Contig335500 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12031:22650_1:N:0:ACTTGA Contig665735 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13873:22581_1:N:0:ACTTGA Contig257539 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15060:23995_1:N:0:ACTTGA Contig4004 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18588:24491_1:N:0:ACTTGA Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5295:27128_1:N:0:ACTTGA Contig217014 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5712:27902_1:N:0:ACTTGA Contig21857 18273 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9428:27926_1:N:0:ACTTGA Contig110528 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8580:31152_1:N:0:ACTTGA Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14906:31497_1:N:0:ACTTGA Contig468440 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18825:31308_1:N:0:ACTTGA Contig560849 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5595:32237_1:N:0:ACTTGA Contig40273 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19561:33234_1:N:0:ACTTGA Contig88045 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15028:33817_1:N:0:ACTTGA Contig279327 70 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3343:35078_1:N:0:ACTTGA Contig9992 4136 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15166:36502_1:N:0:ACTTGA Contig519041 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17771:37094_1:N:0:ACTTGA Contig364609 169 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16060:37667_1:N:0:ACTTGA Contig218552 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13483:38850_1:N:0:ACTTGA Contig13964 1504 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11851:39142_1:N:0:ACTTGA Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14257:39230_1:N:0:ACTTGA Contig429501 100 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5266:39542_1:N:0:ACTTGA Contig622127 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:5267:40708_1:N:0:ACTTGA Contig265711 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12146:41155_1:N:0:ACTTGA Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11285:42080_1:N:0:ACTTGA Contig22900 28602 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3676:43143_1:N:0:ACTTGA Contig300694 92 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13249:43237_1:N:0:ACTTGA Contig643599 214 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13431:43693_1:N:0:ACTTGA Contig100509 1078 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10331:44454_1:N:0:ACTTGA Contig7983 13790 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11809:44980_1:N:0:ACTTGA Contig80756 2534 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8900:45327_1:N:0:ACTTGA Contig66850 10494 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4125:45523_1:N:0:ACTTGA Contig99098 5113 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16474:45903_1:N:0:ACTTGA Contig593592 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17961:46710_1:N:0:ACTTGA Contig143774 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12370:47530_1:N:0:ACTTGA Contig290221 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6420:48159_1:N:0:ACTTGA Contig642291 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:3460:48282_1:N:0:ACTTGA Contig464808 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:21124:51640_1:N:0:ACTTGA Contig109169 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16676:53231_1:N:0:ACTTGA Contig293343 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16853:53862_1:N:0:ACTTGA Contig315714 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11209:54001_1:N:0:ACTTGA Contig484762 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13043:54695_1:N:0:ACTTGA Contig52297 3425 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12584:55638_1:N:0:ACTTGA Contig216230 5619 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9364:55974_1:N:0:ACTTGA Contig172700 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13606:56233_1:N:0:ACTTGA Contig163300 661 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16621:56095_1:N:0:ACTTGA Contig47013 6109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11378:56313_1:N:0:ACTTGA Contig461841 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6466:56969_1:N:0:ACTTGA Contig70911 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9617:60151_1:N:0:ACTTGA Contig397411 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4537:60550_1:N:0:ACTTGA Contig128994 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10484:61157_1:N:0:ACTTGA Contig613149 134 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12172:62114_1:N:0:ACTTGA Contig122701 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7442:63739_1:N:0:ACTTGA Contig595891 105 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17094:64811_1:N:0:ACTTGA Contig290726 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19805:65818_1:N:0:ACTTGA Contig184396 3349 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18209:66748_1:N:0:ACTTGA Contig63990 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7998:67168_1:N:0:ACTTGA Contig382640 131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7116:67298_1:N:0:ACTTGA Contig35801 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6992:67650_1:N:0:ACTTGA Contig549636 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18278:68721_1:N:0:ACTTGA Contig358013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:19547:68985_1:N:0:ACTTGA Contig59209 1647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20489:69689_1:N:0:ACTTGA Contig131339 1218 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6544:70112_1:N:0:ACTTGA Contig67821 3139 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9886:70150_1:N:0:ACTTGA Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12850:70888_1:N:0:ACTTGA Contig94182 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7418:72733_1:N:0:ACTTGA Contig672922 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6027:73405_1:N:0:ACTTGA Contig166567 784 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:2915:74487_1:N:0:ACTTGA Contig486910 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:14503:74348_1:N:0:ACTTGA Contig56058 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17009:74661_1:N:0:ACTTGA Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6229:74896_1:N:0:ACTTGA Contig466298 235 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9572:75858_1:N:0:ACTTGA Contig27128 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1626:76109_1:N:0:ACTTGA Contig582284 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:4021:76499_1:N:0:ACTTGA Contig635923 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16682:76871_1:N:0:ACTTGA Contig516343 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1691:77069_1:N:0:ACTTGA Contig12094 242 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8859:77979_1:N:0:ACTTGA Contig584583 96 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8091:78910_1:N:0:ACTTGA Contig320954 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8367:78933_1:N:0:ACTTGA Contig670481 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:13544:78881_1:N:0:ACTTGA Contig149196 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:10262:80081_1:N:0:ACTTGA Contig82843 5248 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7030:82214_1:N:0:ACTTGA Contig684730 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:6820:82528_1:N:0:ACTTGA Contig220736 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18105:83155_1:N:0:ACTTGA Contig415288 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1305:86096_1:N:0:ACTTGA Contig689269 424 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17893:86045_1:N:0:ACTTGA Contig50531 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7042:88108_1:N:0:ACTTGA Contig271592 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7612:88636_1:N:0:ACTTGA Contig103667 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:12520:88854_1:N:0:ACTTGA Contig100539 2255 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:20036:91700_1:N:0:ACTTGA Contig143583 4039 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15819:93738_1:N:0:ACTTGA Contig321890 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1970:95126_1:N:0:ACTTGA Contig284670 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8937:95314_1:N:0:ACTTGA Contig57449 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:9284:95599_1:N:0:ACTTGA Contig652345 104 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:17327:95696_1:N:0:ACTTGA Contig687199 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:1987:95907_1:N:0:ACTTGA Contig5827 13716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:15669:96697_1:N:0:ACTTGA Contig44266 4520 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:7352:96920_1:N:0:ACTTGA Contig633094 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:8541:97492_1:N:0:ACTTGA Contig504043 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:16715:98114_1:N:0:ACTTGA Contig454130 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:18557:99828_1:N:0:ACTTGA Contig3504 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1105:11476:100025_1:N:0:ACTTGA Contig654067 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2798:2393_1:N:0:ACTTGA Contig362072 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5013:3777_1:N:0:ACTTGA Contig689197 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4686:4847_1:N:0:ACTTGA Contig81493 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6470:4919_1:N:0:ACTTGA Contig498307 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9375:5021_1:N:0:ACTTGA Contig298690 373 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16414:5272_1:N:0:ACTTGA Contig82757 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1888:6440_1:N:0:ACTTGA Contig171040 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11226:6455_1:N:0:ACTTGA Contig163118 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14752:6979_1:N:0:ACTTGA Contig16983 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4700:7324_1:N:0:ACTTGA Contig414714 381 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17370:10349_1:N:0:ACTTGA Contig437845 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2225:11719_1:N:0:ACTTGA Contig647954 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12114:12030_1:N:0:ACTTGA Contig600599 243 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7422:12697_1:N:0:ACTTGA Contig197442 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11824:13417_1:N:0:ACTTGA Contig137089 1038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11338:13889_1:N:0:ACTTGA Contig21483 8467 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6695:14648_1:N:0:ACTTGA Contig243367 151 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16897:14579_1:N:0:ACTTGA Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:6338:14815_1:N:0:ACTTGA Contig617279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19032:16084_1:N:0:ACTTGA Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8980:17674_1:N:0:ACTTGA Contig438716 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9745:18128_1:N:0:ACTTGA Contig247792 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13767:18931_1:N:0:ACTTGA Contig573035 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5905:19302_1:N:0:ACTTGA Contig393239 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13309:22432_1:N:0:ACTTGA Contig639636 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12399:22979_1:N:0:ACGTGA Contig301720 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18347:25880_1:N:0:ACTTGA Contig17247 6830 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20083:26154_1:N:0:ACTTGA Contig81239 2277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15197:26846_1:N:0:ACTTGA Contig43760 9414 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1131:28196_1:N:0:ACTTGA Contig184179 3616 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16465:28278_1:N:0:ACTTGA Contig208562 702 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9361:29806_1:N:0:ACTTGA Contig21559 13577 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16960:30092_1:N:0:ACTTGA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5897:30323_1:N:0:ACTTGA Contig119377 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17071:30305_1:N:0:ACTTGA Contig476015 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3540:31405_1:N:0:ACTTGA Contig65837 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17263:33305_1:N:0:ACTTGA Contig224935 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20129:34972_1:N:0:ACTTGA Contig437976 99 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1716:36032_1:N:0:ACTTGA Contig449590 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9939:36241_1:N:0:ACTTGA Contig676430 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18236:36051_1:N:0:ACTTGA Contig604793 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14364:37402_1:N:0:ACTTGA Contig73937 5659 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8230:38110_1:N:0:ACTTGA Contig548241 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7115:38254_1:N:0:ACTTGA Contig157721 768 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3591:38629_1:N:0:ACTTGA Contig469640 125 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18483:40027_1:N:0:ACTTGA Contig593515 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3748:40336_1:N:0:ACTTGA Contig150736 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7591:40922_1:N:0:ACTTGA Contig5827 13716 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17915:43879_1:N:0:ACTTGA Contig686399 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8923:44036_1:N:0:ACTTGA Contig197706 758 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3877:44254_1:N:0:ACTTGA Contig448472 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:17939:44293_1:N:0:ACTTGA Contig148872 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7876:46778_1:N:0:ACTTGA Contig81239 2277 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18966:47026_1:N:0:ACTTGA Contig62846 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2014:47626_1:N:0:ACTTGA Contig143583 4038 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:14038:49440_1:N:0:ACTTGA Contig458601 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16982:49946_1:N:0:ACTTGA Contig9576 779 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4058:50533_1:N:0:ACTTGA Contig415130 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18916:51068_1:N:0:ACTTGA Contig178159 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3738:51720_1:N:0:ACTTGA Contig340208 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2032:53434_1:N:0:ACTTGA Contig135767 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2442:54410_1:N:0:ACTTGA Contig70912 3278 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19764:55089_1:N:0:ACTTGA Contig78279 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20534:55073_1:N:0:ACTTGA Contig340834 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3227:56000_1:N:0:ACTTGA Contig149790 6599 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10121:56463_1:N:0:ACTTGA Contig309032 1103 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7506:59488_1:N:0:ACTTGA Contig309219 95 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1475:60547_1:N:0:ACTTGA Contig446225 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9838:61975_1:N:0:ACTTGA Contig396501 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12579:62615_1:N:0:ACTTGA Contig466298 233 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3953:63234_1:N:0:ACTTGA Contig614071 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11978:64166_1:N:0:ACTTGA Contig335668 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13820:64429_1:N:0:ACTTGA Contig645560 109 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10731:64634_1:N:0:ACTTGA Contig90884 1837 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3682:67387_1:N:0:ACTTGA Contig379963 82 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2400:69256_1:N:0:ACTTGA Contig528739 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:19748:69939_1:N:0:ACTTGA Contig167329 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4109:70958_1:N:0:ACTTGA Contig151288 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4229:71133_1:N:0:ACTTGA Contig94182 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10298:72179_1:N:0:ACTTGA Contig204717 2141 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3441:73271_1:N:0:ACTTGA Contig593865 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9744:73567_1:N:0:ACTTGA Contig92128 4647 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9372:74159_1:N:0:ACTTGA Contig322052 402 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4561:74569_1:N:0:ACTTGA Contig481983 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:11869:74903_1:N:0:ACTTGA Contig104400 1767 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:3293:77238_1:N:0:ACTTGA Contig386575 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12854:77133_1:N:0:ACTTGA Contig245155 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:20294:80561_1:N:0:ACTTGA Contig626436 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4359:80830_1:N:0:ACTTGA Contig296481 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18556:80844_1:N:0:ACTTGA Contig40327 2338 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7286:81636_1:N:0:ACTTGA Contig9126 736 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:9096:82452_1:N:0:ACTTGA Contig145629 7006 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12846:82623_1:N:0:ACTTGA Contig83964 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4923:83681_1:N:0:ACTTGA Contig45395 31219 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5888:83758_1:N:0:ACTTGA Contig333842 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13022:84160_1:N:0:ACTTGA Contig180919 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15055:84336_1:N:0:ACTTGA Contig359001 867 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:4463:87498_1:N:0:ACTTGA Contig66444 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:1426:88860_1:N:0:ACTTGA Contig359004 72 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:15909:90864_1:N:0:ACTTGA Contig2939 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2816:92351_1:N:0:ACTTGA Contig192602 1453 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:8609:92728_1:N:0:ACTTGA Contig131245 1900 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13941:92813_1:N:0:ACTTGA Contig171040 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:16452:93236_1:N:0:ACTTGA Contig37581 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:2976:94992_1:N:0:ACTTGA Contig448189 88 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:18251:94855_1:N:0:ACTTGA Contig513461 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:5502:95213_1:N:0:ACTTGA Contig80846 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:12003:96523_1:N:0:ACTTGA Contig512524 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:10708:98213_1:N:0:ACTTGA Contig615452 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:13638:100186_1:N:0:ACTTGA Contig269087 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1106:7825:101064_1:N:0:ACTTGA Contig492744 78 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8914:4059_1:N:0:ACTTGA Contig108622 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6748:5181_1:N:0:ACTTGA Contig178183 953 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7042:6984_1:N:0:ACTTGA Contig462768 140 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12256:6883_1:N:0:ACTTGA Contig408841 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20284:6899_1:N:0:ACTTGA Contig622089 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5870:8140_1:N:0:ACTTGA Contig507975 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11107:8803_1:N:0:ACTTGA Contig613795 432 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14371:8875_1:N:0:ACTTGA Contig78580 2682 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14235:9003_1:N:0:ACTTGA Contig668332 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2270:10175_1:N:0:ACTTGA Contig218635 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14032:10079_1:N:0:ACTTGA Contig94730 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6749:10560_1:N:0:ACTTGA Contig172293 937 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20866:11963_1:N:0:ACTTGA Contig587345 114 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1896:12348_1:N:0:ACTTGA Contig562407 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4105:13531_1:N:0:ACTTGA Contig209694 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4279:14064_1:N:0:ACTTGA Contig551643 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11101:14688_1:N:0:ACTTGA Contig681504 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6358:15376_1:N:0:ACTTGA Contig620763 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2764:15524_1:N:0:ACTTGA Contig228785 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12069:16593_1:N:0:ACTTGA Contig307018 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20555:18398_1:N:0:ACTTGA Contig435 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19611:19081_1:N:0:ACTTGA Contig109908 5296 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11612:21903_1:N:0:ACTTGA Contig71208 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6987:22027_1:N:0:ACTTGA Contig509043 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9568:22464_1:N:0:ACTTGA Contig11458 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20019:22564_1:N:0:ACTTGA Contig331950 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16892:23995_1:N:0:ACTTGA Contig326441 80 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6118:24097_1:N:0:ACTTGA Contig642838 128 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13162:24558_1:N:0:ACTTGA Contig265285 377 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16748:25238_1:N:0:ACTTGA Contig595983 107 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12558:25865_1:N:0:ACTTGA Contig52820 12646 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14390:27407_1:N:0:ACTTGA Contig548339 75 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8829:28789_1:N:0:ACTTGA Contig369418 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15321:30784_1:N:0:ACTTGA Contig695425 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19395:31025_1:N:0:ACTTGA Contig682755 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19736:31571_1:N:0:ACTTGA Contig438052 102 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14862:31804_1:N:0:ACTTGA Contig591035 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12255:32293_1:N:0:ACTTGA Contig361502 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10517:33725_1:N:0:ACTTGA Contig258621 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7832:34442_1:N:0:ACTTGA Contig66031 4138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17681:34938_1:N:0:ACTTGA Contig353866 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1636:35423_1:N:0:ACTTGA Contig130430 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1575:39660_1:N:0:ACTTGA Contig150304 993 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2959:39860_1:N:0:ACTTGA Contig561977 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17961:39864_1:N:0:ACTTGA Contig622127 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5693:40329_1:N:0:ACTTGA Contig425929 303 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13034:40381_1:N:0:ACTTGA Contig8767 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3201:40673_1:N:0:ACTTGA Contig81493 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2578:41283_1:N:0:ACTTGA Contig98831 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7707:41374_1:N:0:ACTTGA Contig351498 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18988:41935_1:N:0:ACTTGA Contig684976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3949:42722_1:N:0:ACTTGA Contig271437 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8362:42585_1:N:0:ACTTGA Contig3104 3559 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14318:42587_1:N:0:ACTTGA Contig270147 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8670:42866_1:N:0:ACTTGA Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1523:43032_1:N:0:ACTTGA Contig196882 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18015:43279_1:N:0:ACTTGA Contig528010 375 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17438:43690_1:N:0:ACTTGA Contig322052 404 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4585:44199_1:N:0:ACTTGA Contig203659 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9446:45028_1:N:0:ACTTGA Contig524673 71 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18109:45777_1:N:0:ACTTGA Contig518065 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12529:46812_1:N:0:ACTTGA Contig308447 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14569:47462_1:N:0:ACTTGA Contig677140 85 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16893:47699_1:N:0:ACTTGA Contig235004 650 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16041:48003_1:N:0:ACTTGA Contig197157 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16863:48431_1:N:0:ACTTGA Contig462545 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19759:50299_1:N:0:ACTTGA Contig89289 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7265:50879_1:N:0:ACTTGA Contig79884 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2547:51471_1:N:0:ACTTGA Contig653261 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16694:51302_1:N:0:ACTTGA Contig623593 108 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14636:51570_1:N:0:ACTTGA Contig410306 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11516:52678_1:N:0:ACTTGA Contig660656 84 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12019:52674_1:N:0:ACTTGA Contig321890 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12212:53823_1:N:0:ACTTGA Contig25163 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9033:54967_1:N:0:ACTTGA Contig8246 5836 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19565:55698_1:N:0:ACTTGA Contig392759 101 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19284:55773_1:N:0:ACTTGA Contig653283 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6403:56161_1:N:0:ACTTGA Contig279404 251 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17510:56294_1:N:0:ACTTGA Contig496915 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8971:56651_1:N:0:ACTTGA Contig114663 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8966:56706_1:N:0:ACTTGA Contig114663 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:4453:56913_1:N:0:ACTTGA Contig2939 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7535:56834_1:N:0:ACTTGA Contig28864 27254 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13871:57781_1:N:0:ACTTGA Contig592753 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11503:58985_1:N:0:ACTTGA Contig114055 1068 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9825:59081_1:N:0:ACTTGA Contig32976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5786:59521_1:N:0:ACTTGA Contig59968 3131 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6524:65523_1:N:0:ACTTGA Contig311652 91 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15437:66187_1:N:0:ACTTGA Contig16398 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16992:66327_1:N:0:ACTTGA Contig25186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7126:67640_1:N:0:ACTTGA Contig433206 236 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19518:68409_1:N:0:ACTTGA Contig91749 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6949:69135_1:N:0:ACTTGA Contig695885 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3497:69556_1:N:0:ACTTGA Contig143830 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7043:69620_1:N:0:ACTTGA Contig376799 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18293:70112_1:N:0:ACTTGA Contig218635 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14896:71290_1:N:0:TCTTGA Contig587219 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:17705:71812_1:N:0:ACTTGA Contig26049 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13274:73565_1:N:0:ACTTGA Contig584193 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14940:74102_1:N:0:ACTTGA Contig684976 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16381:74975_1:N:0:ACTTGA Contig483326 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5847:75087_1:N:0:ACTTGA Contig67821 3138 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12178:75867_1:N:0:ACTTGA Contig182529 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19448:75762_1:N:0:ACTTGA Contig3872 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5009:76147_1:N:0:ACTTGA Contig170027 3656 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19890:76740_1:N:0:ACTTGA Contig445967 126 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7055:78166_1:N:0:ACTTGA Contig617187 248 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:10120:78158_1:N:0:ACTTGG Contig221571 76 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:16707:78286_1:N:0:ACTTGA Contig188524 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19598:78821_1:N:0:ACTTGA Contig596212 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:19643:80270_1:N:0:ACTTGA Contig102570 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3398:81043_1:N:0:ACTTGA Contig657013 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2966:82695_1:N:0:ACTTGA Contig540649 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8397:82609_1:N:0:ACTTGA Contig322864 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:18333:83623_1:N:0:ACTTGA Contig662452 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2723:83895_1:N:0:ACTTGA Contig162104 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14712:84368_1:N:0:ACTTGA Contig470719 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13277:86532_1:N:0:ACTTGA Contig115061 4197 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:7944:86901_1:N:0:ACTTGA Contig501334 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:11932:88902_1:N:0:ACTTGA Contig450680 86 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6567:89340_1:N:0:ACTTGA Contig572718 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6603:89741_1:N:0:ACTTGA Contig119413 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:14634:90957_1:N:0:ACTTGA Contig339600 93 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:5011:91393_1:N:0:ACTTGA Contig593756 69 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:8175:91335_1:N:0:ACTTGA Contig652172 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2169:91529_1:N:0:ACTTGA Contig213533 930 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12764:92519_1:N:0:ACTTGA Contig546100 74 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:12419:93265_1:N:0:ACTTGA Contig36937 4883 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:9799:93507_1:N:0:ACTTGA Contig255999 269 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20461:94499_1:N:0:ACTTGA Contig133161 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:1136:96194_1:N:0:ACTTGA Contig181380 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:15520:99065_1:N:0:ACTTGA Contig67092 5393 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13963:99801_1:N:0:ACTTGA Contig59612 5199 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:2832:100581_1:N:0:ACTTGA Contig695395 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:6014:100779_1:N:0:ACTTGA Contig606327 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:13716:100847_1:N:0:ACTTGA Contig38952 1543 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:20117:100777_1:N:0:ACTTGA Contig136966 1853 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1107:3237:101094_1:N:0:ACTTGA Contig29257 3591 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5136:2334_1:N:0:ACTTGA Contig98831 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18182:2946_1:N:0:ACTTGA Contig374044 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14236:3594_1:N:0:ACTTGA Contig242792 79 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14687:5330_1:N:0:ACTTGA Contig382561 149 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5172:6173_1:N:0:ACTTGA Contig53330 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10694:6121_1:N:0:ACTTGA Contig76445 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14746:6060_1:N:0:ACTTGA Contig147186 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:16266:6828_1:N:0:ACTTGA Contig122243 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10377:7270_1:N:0:ACTTGA Contig20366 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17392:10940_1:N:0:ACTTGA Contig258287 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:19020:11560_1:N:0:ACTTGA Contig72096 6203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:2732:12961_1:N:0:ACTTGA Contig218635 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9324:13108_1:N:0:ACTTGA Contig190498 3137 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1117:13519_1:N:0:ACTTGA Contig181720 2030 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11992:15774_1:N:0:ACTTGA Contig130529 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3546:17233_1:N:0:ACTTGA Contig664366 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8470:17159_1:N:0:ACTTGA Contig139104 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17530:19512_1:N:0:ACTTGA Contig613818 81 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:3098:22609_1:N:0:ACTTGA Contig61099 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:6886:23257_1:N:0:ACTTGA Contig221571 77 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17931:23416_1:N:0:ACTTGA Contig299627 87 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:20859:24190_1:N:0:ACTTGA Contig50321 1220 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17166:24816_1:N:0:ACTTGA Contig15193 203 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9382:25286_1:N:0:ACTTGA Contig143583 4040 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:11662:25366_1:N:0:ACTTGA Contig117083 968 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14507:25891_1:N:0:ACTTGA Contig432261 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:14240:26066_1:N:0:ACTTGA Contig305376 1223 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:17179:26853_1:N:0:ACTTGA Contig262933 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:9255:27647_1:N:0:ACTTGA Contig608213 73 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:12891:27524_1:N:0:ACTTGA Contig581449 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:1580:29261_1:N:0:ACTTGA Contig657221 174 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:7349:29333_1:N:0:ACTTGA Contig61589 13320 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:10447:29350_1:N:0:ACTTGA Contig16579 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:5487:32731_1:N:0:ACTTGA Contig17702 2 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:8839:33051_1:N:0:ACTTGA Contig123930 1 Chromosomal sequence could not be extracted for HWI-D00743:54:C8MOMACXX:1:1108:18553:35713_1:N:0:ACTTGA Contig648325 1 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 788296 (78.83%) aligned 0 times 108680 (10.87%) aligned exactly 1 time 103024 (10.30%) aligned >1 times 21.17% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 367629 (36.76%) aligned 0 times 217322 (21.73%) aligned exactly 1 time 415049 (41.50%) aligned >1 times 63.24% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 787159 (78.72%) aligned 0 times 109642 (10.96%) aligned exactly 1 time 103199 (10.32%) aligned >1 times 21.28% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 368101 (36.81%) aligned 0 times 216607 (21.66%) aligned exactly 1 time 415292 (41.53%) aligned >1 times 63.19% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files 8_ACTTGA_L001_R1_001_trimmed.fq.gz_C_to_T.fastq and 8_ACTTGA_L001_R1_001_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 396833 Mapping efficiency: 39.7% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2243929 Total methylated C's in CpG context: 78909 Total methylated C's in CHG context: 6203 Total methylated C's in CHH context: 117847 Total methylated C's in Unknown context: 30 Total unmethylated C's in CpG context: 227701 Total unmethylated C's in CHG context: 409696 Total unmethylated C's in CHH context: 1403573 Total unmethylated C's in Unknown context: 382 C methylated in CpG context: 25.7% C methylated in CHG context: 1.5% C methylated in CHH context: 7.7% C methylated in Unknown context (CN or CHN): 7.3% Bismark completed in 0d 2h 54m 2s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_10_s456_trimmed.fq.gz Writing a C -> T converted version of the input file zr1394_10_s456_trimmed.fq.gz to zr1394_10_s456_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file zr1394_10_s456_trimmed.fq.gz to zr1394_10_s456_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file zr1394_10_s456_trimmed.fq.gz (1000001 sequences in total) Input files are zr1394_10_s456_trimmed.fq.gz_C_to_T.fastq and zr1394_10_s456_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from zr1394_10_s456_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-C00124:164:C7URDANXX:2:1101:1108:2120_1:Y:0:TATCTT 4 * 0 0 * * 0 0 ATTAATGAGAATGATTTTTTTTTTA B//FF>> Writing bisulfite mapping results to zr1394_10_s456_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_10_s456_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16993:2670_1:N:0:TAGCTT Contig629525 82 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15411:2947_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5028:3145_1:N:0:TAGCTT Contig257784 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15873:3702_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5568:4119_1:N:0:TAGCTT Contig572146 227 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8169:4474_1:N:0:TAGCTT Contig347876 93 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12985:5200_1:N:0:TAGCTT Contig414714 381 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17304:6694_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18698:6857_1:N:0:TAGCTT Contig165074 801 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4416:7020_1:N:0:TAGCTT Contig53968 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2418:7661_1:N:0:TAGCTT Contig312818 145 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16059:7561_1:N:0:TAGCTT Contig127394 5048 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8221:7896_1:N:0:TAGCTT Contig4032 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10417:8931_1:N:0:TAGCTT Contig23208 48889 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20451:10233_1:N:0:TAGCTT Contig654016 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17241:10382_1:N:0:TAGCTT Contig128909 3375 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8343:10606_1:N:0:TAGCTT Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9124:10885_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11809:10919_1:N:0:TAGCTT Contig184372 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14285:10759_1:N:0:TAGCTT Contig81775 1030 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8787:11434_1:N:0:TAGCTT Contig119692 762 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2438:11824_1:N:0:TAGCTT Contig644738 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10051:11809_1:N:0:TAGCTT Contig611439 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9850:12681_1:N:0:TAGCTT Contig113375 1686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:19766:12711_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2833:13354_1:N:0:TAGCTT Contig25082 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14736:13956_1:N:0:TAGCTT Contig585284 93 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:19015:14132_1:N:0:TAGCTT Contig325954 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8659:14465_1:N:0:TAGCTT Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13961:15635_1:N:0:TAGCTT Contig303333 69 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:19561:15975_1:N:0:TAGCTT Contig501995 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7462:16630_1:N:0:TAGCTT Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14430:16689_1:N:0:TAGCTT Contig6187 4302 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16951:16532_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13460:17758_1:N:0:TAGCTT Contig31499 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12072:18133_1:Y:0:TAGCTT Contig261481 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16433:18392_1:N:0:TAGCTT Contig356944 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1167:19393_1:N:0:TAGCTT Contig55720 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18746:19963_1:N:0:TAGCTT Contig411763 145 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7853:20426_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2461:20904_1:N:0:TAGCTT Contig242744 89 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5273:21079_1:N:0:TAGCTT Contig165074 799 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5307:21223_1:N:0:TAGCTT Contig72295 29928 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9673:21202_1:N:0:TAGCTT Contig204921 2120 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13981:21128_1:N:0:TAGCTT Contig167634 6560 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18578:21215_1:Y:0:TAGCTT Contig632348 161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1960:21268_1:N:0:TAGCTT Contig386531 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2173:21341_1:N:0:TAGCTT Contig234312 138 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14859:21598_1:N:0:TAGCTT Contig385215 5686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15428:21625_1:N:0:TAGCTT Contig183452 578 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13684:22560_1:N:0:TAGCTT Contig540856 95 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16466:22607_1:N:0:TAGCTT Contig20969 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4577:22812_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8140:22870_1:N:0:TAGCTT Contig98072 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17825:22873_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4918:23694_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4091:24842_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2215:25072_1:N:0:TAGCTT Contig58764 6215 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13773:25088_1:N:0:TAGCTT Contig167877 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12322:25320_1:N:0:TAGCTT Contig58764 6215 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8109:25629_1:N:0:TAGCTT Contig189406 293 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2862:27312_1:N:0:TAGCTT Contig211686 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2917:27794_1:N:0:TAGCTT Contig523940 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9879:29377_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4063:29549_1:N:0:TAGCTT Contig90734 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12613:29521_1:N:0:TAGCTT Contig136015 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8692:30337_1:N:0:TAGCTT Contig357783 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17391:30640_1:N:0:TAGCTT Contig396501 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16860:31055_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1200:31682_1:N:0:TAGCTT Contig671821 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15513:31970_1:N:0:TAGCTT Contig282460 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1306:32053_1:N:0:TAGCTT Contig130274 1430 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16150:32838_1:N:0:TAGCTT Contig590770 105 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11519:33198_1:N:0:TAGCTT Contig480653 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16279:33702_1:N:0:TAGCTT Contig128141 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20908:33675_1:N:0:TAACTT Contig69363 2718 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16272:34993_1:N:0:TAGCTT Contig209565 642 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:3291:35050_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15794:35826_1:Y:0:TAGCTT Contig167897 662 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17159:36360_1:N:0:TAGCTT Contig47022 13027 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5409:37122_1:N:0:TAGCTT Contig282460 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9347:37209_1:N:0:TAGCTT Contig393387 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11383:37773_1:N:0:TAGCTT Contig3884 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6528:40004_1:N:0:TAGCTT Contig651442 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20601:40307_1:Y:0:TAGCTT Contig52304 19148 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18208:40571_1:N:0:TAGCTT Contig104147 1226 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7754:42059_1:N:0:TAGCTT Contig116318 1708 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15297:44478_1:Y:0:TAGCTT Contig645468 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2819:44506_1:N:0:TAGCTT Contig685443 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9537:44618_1:N:0:TAGCTT Contig181265 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13659:44771_1:N:0:TAGCTT Contig33217 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:21151:44755_1:N:0:TAGCTT Contig596500 122 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7818:45401_1:N:0:TAGCTT Contig73937 5660 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14965:45437_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4449:45640_1:N:0:TAGCTT Contig86417 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15890:45952_1:N:0:TAGCTT Contig245735 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9639:47420_1:N:0:TAGCTT Contig111753 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17339:47553_1:N:0:TAGCTT Contig494604 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11035:48545_1:N:0:TAGCTT Contig575589 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:3557:48781_1:N:0:TAGCTT Contig163081 2823 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8696:49706_1:N:0:TAGCTT Contig533816 187 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8685:49717_1:N:0:TAGCTT Contig533816 187 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8931:49907_1:N:0:TAGCTT Contig62815 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:3666:50473_1:N:0:TAGCTT Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5422:50561_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20351:50577_1:N:0:TAGCTT Contig143855 2495 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11084:50835_1:N:0:TAGCTT Contig635923 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15889:52540_1:N:0:TAGCTT Contig184175 3925 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8414:52984_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20446:53663_1:N:0:TAGCTT Contig262974 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10399:54397_1:N:0:TAGCTT Contig545484 123 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16782:54405_1:N:0:TAGCTT Contig670732 124 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9346:55133_1:Y:0:TAGCTT Contig393611 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12730:55140_1:N:0:TAGCTT Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14357:55043_1:N:0:TAGCTT Contig193267 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18651:55479_1:Y:0:TAACTT Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17037:55853_1:N:0:TAGCTT Contig343890 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16958:57414_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12372:58527_1:N:0:TAGCTT Contig542597 134 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17955:60258_1:N:0:TAGCTT Contig89673 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15250:60507_1:N:0:TAGCTT Contig166736 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14318:60977_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18042:60753_1:Y:0:TAGCTT Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6094:61856_1:N:0:TAGCTT Contig48907 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2768:62167_1:N:0:TAGCTT Contig39377 4444 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9047:62641_1:N:0:TAGCTT Contig316898 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10013:64221_1:N:0:TAGCTT Contig176831 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4101:64324_1:N:0:TAGCTT Contig272596 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14518:64720_1:N:0:TAGCTT Contig333367 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13511:65565_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9294:66132_1:N:0:TAGCTT Contig119665 1276 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17920:66202_1:N:0:TAGCTT Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13942:66252_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17858:66282_1:N:0:TAGCTT Contig191484 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18734:66327_1:N:0:TAGCTT Contig93525 1223 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4461:66822_1:Y:0:TAGCTT Contig126007 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7393:66888_1:N:0:AAGCTT Contig607840 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12270:66802_1:N:0:TAGCTT Contig65766 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9304:69939_1:N:0:TAGCTT Contig437684 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11768:70493_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8122:70572_1:N:0:TAGCTT Contig58165 2668 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2552:71383_1:N:0:TAGCTT Contig354392 731 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8437:71307_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1142:71989_1:N:0:TAGCTT Contig18716 78249 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1869:71923_1:N:0:TAGCTT Contig311276 109 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11139:72775_1:N:0:TAGCTT Contig252442 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:8300:73723_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:11046:74306_1:N:0:TAGCTT Contig246983 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16974:75063_1:N:0:TAGCTT Contig4083 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12294:76110_1:N:0:TAGCTT Contig49996 1915 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7495:76720_1:N:0:TAGCTT Contig96916 2520 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20666:76693_1:N:0:TAGCTT Contig22384 43638 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7626:77223_1:N:0:TAGCTT Contig55633 9951 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:17486:77268_1:Y:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13778:77813_1:N:0:TAGCTT Contig55184 4566 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15889:78515_1:N:0:TAGCTT Contig540856 94 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15514:79154_1:N:0:TAGCTT Contig221585 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5339:80011_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15489:80035_1:N:0:TAGCTT Contig200416 369 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18018:80491_1:N:0:TAGCTT Contig61736 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9899:80838_1:N:0:TAGCTT Contig9013 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5449:81229_1:Y:0:TAGCTT Contig657637 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5498:81679_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2353:81949_1:N:0:TAGCTT Contig612168 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13726:81982_1:N:0:TAGCTT Contig125278 3049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2529:82234_1:N:0:TAGCTT Contig515784 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20569:82454_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20487:82693_1:N:0:TAGCTT Contig358646 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13378:83288_1:N:0:TAGCTT Contig402652 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13746:83459_1:N:0:TAGCTT Contig76257 233 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:3458:84286_1:N:0:TAGCTT Contig148429 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15392:85200_1:N:0:TAGCTT Contig158190 4545 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:5967:85892_1:N:0:TAGCTT Contig518392 82 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:19626:86028_1:N:0:TAGCTT Contig125259 1319 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:18885:86629_1:N:0:TAGCTT Contig617439 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9587:87232_1:N:0:TAGCTT Contig359762 120 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:19821:87406_1:N:0:TAGCTT Contig557232 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:9482:87842_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:15768:88242_1:N:0:TAGCTT Contig33540 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1322:88425_1:Y:0:TAGCTG Contig103363 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6205:89119_1:N:0:TAGCTT Contig383229 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10126:89066_1:N:0:TAGCTT Contig5709 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16453:89089_1:N:0:TAGCTT Contig452351 82 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1742:89514_1:Y:0:TAGCTT Contig69363 2718 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10740:89655_1:N:0:TAGCTT Contig439948 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:7589:90807_1:N:0:TAGCTT Contig330383 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12521:90860_1:N:0:TAGCTT Contig639010 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13999:91290_1:N:0:TAGCTT Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:1616:91638_1:N:0:TAGCTT Contig182413 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4759:91897_1:N:0:TAGCTT Contig16440 752 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6370:92386_1:N:0:TAGCTT Contig403649 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6377:93033_1:N:0:TAGCTT Contig199403 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6710:93204_1:N:0:TAGCTT Contig87998 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10665:94523_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:19887:94712_1:N:0:TAGCTT Contig122341 5862 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:20452:94605_1:N:0:TAGCTT Contig21236 67006 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14367:95252_1:N:0:TAGCTT Contig235004 650 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:6895:96080_1:N:0:TAGCTT Contig286563 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:12734:97168_1:N:0:TAGCTT Contig160772 1044 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:16814:97499_1:N:0:TAGCTT Contig268301 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2748:97970_1:N:0:TAGCTT Contig157385 1106 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:2411:98437_1:N:0:TAGCTT Contig423525 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:13738:98989_1:N:0:TAGCTT Contig138423 7687 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:14235:99469_1:N:0:TAGCTT Contig98010 1760 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:3210:100042_1:N:0:TAGCTT Contig531891 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:4388:100039_1:N:0:TAGCTT Contig543061 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1101:10640:100293_1:N:0:TAGCTT Contig465022 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20247:2287_1:N:0:TAGCTT Contig322890 226 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13622:4138_1:N:0:TAGCTT Contig6668 4190 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11386:5761_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11472:5775_1:N:0:TAGCTT Contig135341 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:17434:5980_1:N:0:TAGCTT Contig317778 94 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6038:6245_1:N:0:TAGCTT Contig154834 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6844:6489_1:N:0:TAGCTT Contig19269 9129 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6929:6497_1:N:0:TAGCTT Contig315572 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11151:6659_1:N:0:TAGCTT Contig628075 99 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18067:7621_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7462:7958_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13226:7907_1:N:0:TAGCTT Contig258429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:19287:9422_1:N:0:TAGCTT Contig21802 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13350:9563_1:N:0:TAGCTT Contig105161 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8998:10187_1:N:0:TAGCTT Contig19207 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16465:10214_1:N:0:TAGCTT Contig120678 1043 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9647:10716_1:N:0:TAGCTT Contig540856 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16779:10954_1:Y:0:TAGCTT Contig521469 244 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5376:11041_1:N:0:TAGCTT Contig68854 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10519:11593_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13235:11695_1:N:0:TAGCTT Contig197727 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15195:13209_1:N:0:TAGCTT Contig613828 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15336:13425_1:N:0:TAGCTT Contig687242 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9427:13697_1:N:0:TAGCTT Contig296481 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16341:13624_1:N:0:TAGCTT Contig181265 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:21000:14464_1:N:0:TAGCTT Contig37026 12198 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15775:14527_1:N:0:TAGCTT Contig603406 89 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6064:14888_1:N:0:TAGCTT Contig471033 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7112:14806_1:N:0:TAGCTT Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18414:15100_1:N:0:TAGCTT Contig38412 5426 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1772:16340_1:N:0:TAGCTT Contig266248 90 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2797:16604_1:N:0:TAGCTT Contig319334 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10026:16618_1:N:0:TAGCTT Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14950:16814_1:Y:0:TAGCTT Contig112006 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8674:17297_1:N:0:TAGCTT Contig81493 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3496:18263_1:N:0:TAGCTT Contig631683 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9782:18281_1:N:0:TAGCTT Contig76963 5824 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7633:18985_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5176:19022_1:N:0:TAGCTT Contig13055 165 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5745:19082_1:N:0:TAGCTT Contig149149 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16765:19049_1:N:0:TAGCTT Contig108161 5758 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13009:19323_1:N:0:TAGCTT Contig416040 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:19646:19900_1:N:0:TAGCTT Contig318323 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13399:20152_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5476:20442_1:N:0:TAGCTT Contig165916 564 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11598:20317_1:N:0:TAGCTT Contig115953 1311 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5078:21707_1:N:0:TAGCTT Contig269341 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3050:22142_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8960:22343_1:Y:0:TAGCTT Contig405033 113 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2959:22535_1:N:0:TAGCTT Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13537:23205_1:N:0:TAGCTT Contig549704 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15289:25223_1:N:0:TAGCTT Contig107556 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10953:25419_1:Y:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12999:25400_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11437:25747_1:N:0:TAGCTT Contig200416 370 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:19419:26356_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7748:26964_1:N:0:TAGCTT Contig165074 801 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2142:27332_1:N:0:TAGCTT Contig190401 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15430:27463_1:N:0:TAGCTT Contig399618 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2830:27664_1:N:0:TAGCTT Contig569896 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9084:27695_1:N:0:TAGCTT Contig25055 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15641:27673_1:N:0:TAGCTT Contig158155 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7319:27816_1:N:0:TAGCTT Contig246787 182 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13568:28654_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14340:28761_1:N:0:TAGCTT Contig69829 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4172:29296_1:N:0:TAGCTT Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16491:29429_1:N:0:TAGCTT Contig176831 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20950:29637_1:N:0:TAGCTT Contig98959 14470 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10050:29999_1:N:0:TAGCTT Contig128385 977 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:19091:30158_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12966:31674_1:N:0:TAGCTT Contig351560 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2957:32964_1:N:0:TAGCTT Contig69363 2719 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18771:32991_1:N:0:TAGCTT Contig181885 1076 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10397:33245_1:N:0:TAGCTT Contig358108 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6773:33548_1:N:0:TAGCTT Contig224935 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6297:34139_1:N:0:TAGCTT Contig125278 3050 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9016:35072_1:N:0:TAGCTT Contig591319 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3918:35343_1:N:0:TAGCTT Contig126695 3025 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5148:35770_1:N:0:TAGCTT Contig167877 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12979:36098_1:N:0:TAGCTT Contig96628 1443 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11266:36264_1:N:0:TAGCTT Contig520323 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2713:37337_1:N:0:TAGCTT Contig360958 111 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2167:37726_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18624:38091_1:N:0:TAGCTT Contig69363 2718 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12417:38391_1:N:0:TAGCTT Contig175398 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7102:39444_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20985:39292_1:Y:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11388:39724_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8941:40175_1:N:0:TAGCTT Contig179593 427 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3788:40292_1:N:0:TAGCTT Contig316024 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3945:41197_1:N:0:TAGCTT Contig204001 1122 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4958:41197_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9523:41113_1:N:0:TAGCTT Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4676:42278_1:N:0:TAGCTT Contig102838 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10967:42454_1:N:0:TAGCTT Contig76904 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4189:42711_1:N:0:TAGCTT Contig374586 1688 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1943:42989_1:Y:0:TAGCTT Contig33932 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13839:43898_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11861:44715_1:N:0:TAGCTT Contig464544 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20642:44512_1:N:0:TAGCTT Contig551271 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2283:45172_1:N:0:TAGCTT Contig276556 77 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18806:45337_1:N:0:TAGCTT Contig111555 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18760:45614_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10200:45856_1:N:0:TAGCTT Contig668140 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12144:45883_1:N:0:TAGCTT Contig474092 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5328:46019_1:N:0:TAGCTT Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7225:47495_1:N:0:TAGCTT Contig651442 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1909:47549_1:Y:0:TCGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13968:47565_1:N:0:TAGCTT Contig651904 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15961:48859_1:N:0:TAGCTT Contig355712 143 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7288:50552_1:N:0:TAGCTT Contig69363 2719 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9177:50689_1:N:0:TAGCTT Contig579818 100 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8426:52246_1:N:0:TAGCTT Contig74923 12935 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:21038:52886_1:N:0:TAGCTT Contig63951 4546 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9674:53225_1:N:0:TAGCTT Contig346524 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4671:53546_1:N:0:TAGCTT Contig179593 427 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13199:53710_1:Y:0:TAGCTT Contig103179 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3691:54070_1:N:0:TAGCTT Contig201331 436 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11468:54077_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5959:54474_1:N:0:TAGCTT Contig553163 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13510:54980_1:N:0:TAGCTT Contig393611 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10839:55727_1:N:0:TAGCTT Contig102206 11788 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3678:55865_1:N:0:TAGCTT Contig45395 31219 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3448:56114_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7756:56240_1:N:0:TAGCTT Contig50321 1220 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10016:56462_1:N:0:TAGCTT Contig161028 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15928:57662_1:N:0:TAGCTT Contig395964 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10011:58973_1:N:0:TAGCTT Contig63897 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9771:59919_1:N:0:TAGCTT Contig414714 382 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8803:60054_1:N:0:TAGCTT Contig20864 1692 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8984:60508_1:N:0:TAGCTT Contig66818 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14250:61196_1:N:0:TAGCTT Contig400864 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2418:61557_1:N:0:TAGCTT Contig615831 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11127:61553_1:N:0:TAGCTT Contig476118 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10072:63328_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11769:63848_1:N:0:TAACTT Contig73937 5659 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14140:63921_1:N:0:TAGCTT Contig694092 118 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18935:63981_1:N:0:TAGCTT Contig25964 8821 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11041:64254_1:N:0:TAGCTT Contig165520 473 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4261:64732_1:N:0:TAGCTT Contig542597 134 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9918:64634_1:N:0:TAGCTT Contig45395 31218 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18889:65444_1:N:0:TAGCTT Contig351541 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20184:65374_1:N:0:TAGCTT Contig586033 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10788:65567_1:N:0:TAGCTT Contig306106 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14302:65596_1:N:0:TAGCTT Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:19926:65647_1:N:0:TAGCTT Contig433682 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1255:66037_1:N:0:TAGCTT Contig106032 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10628:66065_1:N:0:TAGCTT Contig60600 18999 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15666:66753_1:N:0:TAGCTT Contig583206 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16009:67725_1:N:0:TAGCTT Contig19269 9130 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16646:67796_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20794:67982_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15312:68233_1:N:0:TAGCTT Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15346:68771_1:N:0:TAGCTT Contig178753 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20110:68776_1:N:0:TAGCTT Contig3000 11057 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:17608:69998_1:N:0:TAGCTT Contig528361 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2543:70214_1:N:0:TAGCTT Contig137329 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:21072:70604_1:N:0:TAGCTT Contig312699 85 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:13870:71833_1:N:0:TAGCTT Contig109913 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14913:72092_1:N:0:TAGCTT Contig87822 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1407:72936_1:Y:0:TCGCTT Contig161517 343 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2936:73614_1:N:0:TAGCTT Contig185168 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14348:73514_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:16152:74116_1:N:0:TAGCTT Contig552872 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1921:74487_1:N:0:TAGCTT Contig21802 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20840:74549_1:N:0:TAGCTT Contig558169 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18477:75266_1:N:0:TAGCTT Contig512343 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:2272:75772_1:N:0:TAGCTT Contig443961 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:17672:77445_1:N:0:TAGCTT Contig181790 414 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7184:77704_1:N:0:TAGCTT Contig96078 1732 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5494:78572_1:N:0:TAGCTT Contig215392 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1579:79317_1:N:0:TAGCTT Contig457709 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10432:79268_1:N:0:TAGCTT Contig73937 5659 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11050:79440_1:N:0:TAGCTT Contig137666 1393 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6746:79575_1:N:0:TAGCTT Contig331213 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11244:79549_1:N:0:TAGCTT Contig635415 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9748:80321_1:N:0:TAGCTT Contig276608 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:7060:80508_1:N:0:TAGCTT Contig38626 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10461:82105_1:N:0:TAGCTT Contig110886 1093 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:17140:82609_1:N:0:TAGCTT Contig612168 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:3481:83647_1:N:0:TAGCTT Contig292091 9069 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12598:83850_1:N:0:TAGCTT Contig587005 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11149:84381_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10260:84951_1:N:0:TAGCTT Contig443925 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:8966:85235_1:N:0:TAGCTT Contig4032 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10399:85714_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5680:86853_1:N:0:TAGCTT Contig686090 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15624:86756_1:N:0:TAGCTT Contig36630 41535 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5848:87918_1:N:0:TAGCTT Contig680495 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:4204:88092_1:N:0:TAGCTT Contig542597 137 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:12841:88263_1:N:0:TAGCTT Contig114749 893 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14755:88392_1:N:0:TAGCTT Contig678358 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:11070:88651_1:N:0:TAGCTT Contig540856 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5651:88860_1:N:0:TAGCTT Contig118069 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:17241:89057_1:N:0:TAGCTT Contig64114 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20583:89191_1:N:0:TAGCTT Contig306106 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:1208:89541_1:N:0:TAGCTT Contig52396 6038 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9956:89771_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9911:89860_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18891:90092_1:N:0:TAGCTT Contig165074 799 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20170:91966_1:N:0:TAGCTT Contig651442 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20800:92792_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:10074:93047_1:N:0:TAGCTT Contig450327 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5855:93255_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14964:93557_1:N:0:TAGCTT Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:19410:93965_1:N:0:TAGCTT Contig610450 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9017:95398_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:5214:95586_1:N:0:TAGCTT Contig21802 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6722:95601_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6645:96651_1:N:0:TAGCTT Contig48797 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:6778:97367_1:N:0:TAGCTT Contig653947 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:18786:97900_1:Y:0:TGGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:15562:98885_1:N:0:TAGCTT Contig612168 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:17812:98819_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:14488:99209_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:9086:99478_1:N:0:TAGCTT Contig269212 95 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1102:20329:100141_1:N:0:TAGCTT Contig576465 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13134:2163_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14904:2558_1:N:0:TAGCTT Contig383229 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14651:3136_1:N:0:TAGCTT Contig5683 19295 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14799:3988_1:N:0:TAGCTT Contig541320 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14634:4033_1:N:0:TAGCTT Contig367031 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9389:4377_1:N:0:TAGCTT Contig174212 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11851:4344_1:N:0:TAGCTT Contig260781 233 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6484:4888_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12745:4904_1:N:0:TAGCTT Contig156601 450 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20010:5026_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12435:5685_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6419:6508_1:N:0:TAGCTT Contig58165 2668 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14532:7398_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7515:8230_1:N:0:TAGCTT Contig544135 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14490:8332_1:N:0:TAGCTT Contig530990 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7112:9182_1:N:0:TAGCTT Contig359524 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18944:9216_1:N:0:TAGCTT Contig49739 5164 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12426:9444_1:N:0:TAGCTT Contig396501 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:10129:10736_1:N:0:TAGCTT Contig358108 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5125:12029_1:N:0:TAGCTT Contig350249 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2356:12252_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3261:12421_1:N:0:TAGCTT Contig175506 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3727:12395_1:N:0:TAGCTT Contig171786 663 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16713:12408_1:N:0:TAGCTT Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19826:12449_1:N:0:TAGCTT Contig16845 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5375:13183_1:N:0:TAGCTT Contig305404 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5288:13488_1:N:0:TAGCTT Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5324:15546_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7432:15908_1:N:0:TAGCTT Contig440652 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12939:15751_1:N:0:TAGCTT Contig144154 1406 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1826:16029_1:Y:0:TAGCTT Contig695859 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2823:16496_1:N:0:TAGCTT Contig344247 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15635:17814_1:N:0:TAGCTT Contig286563 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5630:18709_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7231:19048_1:N:0:TAGCTT Contig114391 913 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18062:19536_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3407:19885_1:N:0:TAGCTT Contig491451 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16796:20287_1:N:0:TAGCTT Contig515784 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20619:20473_1:N:0:TAGCTT Contig590031 166 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19000:20738_1:N:0:TAGCTT Contig146612 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5090:21142_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17029:21018_1:N:0:TAGCTT Contig49419 2122 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18335:21617_1:N:0:TAGCTT Contig322052 404 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4589:21753_1:N:0:TAGCTT Contig605232 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6696:21820_1:N:0:TTGCTT Contig160316 949 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9699:22242_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11193:22505_1:N:0:TAGCTT Contig360561 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13645:24101_1:N:0:TAGCTT Contig262735 4723 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11341:24400_1:N:0:TAGCTT Contig179108 769 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16152:24431_1:Y:0:TAGCTT Contig460300 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7514:25619_1:N:0:TAGCTT Contig403074 225 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18152:26379_1:N:0:TAGCTT Contig221585 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12886:26913_1:N:0:TAGCTT Contig373353 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11039:27046_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12564:27114_1:N:0:TAGCTT Contig399726 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9869:27331_1:N:0:TAGCTT Contig144154 1405 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18807:27285_1:N:0:TAGCTT Contig383229 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2636:28414_1:N:0:TAGCTT Contig592209 197 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2295:28705_1:N:0:TAGCTT Contig72838 5385 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:10717:28717_1:N:0:TAGCTT Contig220374 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14811:29934_1:N:0:TAGCTT Contig695859 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15234:29756_1:N:0:TAGCTT Contig360647 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1499:30122_1:Y:0:TAGCTT Contig653947 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5496:30103_1:N:0:TAGCTT Contig384750 481 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14983:30470_1:N:0:TAGCTT Contig498875 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1316:30720_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16198:30832_1:N:0:TAGCTT Contig16579 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9408:31661_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8598:31897_1:N:0:TAGCTT Contig26066 23531 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16758:31823_1:N:0:TAGCTT Contig400353 457 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11116:32445_1:N:0:TAGCTT Contig558169 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16137:32938_1:N:0:TAGCTT Contig16579 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12167:34214_1:N:0:TAGCTT Contig490865 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13994:34335_1:N:0:TAGCTT Contig515495 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3417:34724_1:N:0:TAGCTT Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8380:34888_1:N:0:TAGCTT Contig496371 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18376:35862_1:N:0:TAGCTT Contig235004 650 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9146:36332_1:N:0:TAGCTT Contig344803 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16681:36325_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6884:36594_1:N:0:TAGCTT Contig443318 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3579:37080_1:N:0:TAGCTT Contig185262 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17364:37138_1:N:0:TAGCTT Contig68854 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4993:37266_1:N:0:TAGCTT Contig88376 1751 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5552:37862_1:N:0:TAGCTT Contig66955 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16169:38478_1:N:0:TAGCTT Contig651442 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17028:38464_1:N:0:TAGCTT Contig88381 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7988:38692_1:N:0:TAGCTT Contig300721 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1276:40170_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13275:40083_1:N:0:TAGCTT Contig382039 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6771:40752_1:N:0:TAGCTT Contig86417 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15530:40846_1:N:0:TAGCTT Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20882:41682_1:N:0:TAGCTT Contig566447 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20838:41913_1:Y:0:TAGCTT Contig175337 409 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:21026:42192_1:Y:0:TAGCTT Contig233938 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11249:43448_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5537:43652_1:N:0:TAGCTT Contig347923 470 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14880:44106_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3934:44342_1:N:0:TAGCTT Contig182863 430 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13211:44449_1:N:0:TAGCTT Contig571958 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8001:44598_1:N:0:TAACTT Contig513901 95 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5992:45369_1:N:0:TAGCTT Contig435848 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7898:45266_1:N:0:TAGCTT Contig589103 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3140:46758_1:N:0:TAGCTT Contig208095 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13788:46764_1:N:0:TAGCTT Contig456860 108 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7268:47379_1:N:0:TAGCTT Contig19272 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9242:47328_1:N:0:TAGCTT Contig671821 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:10948:47562_1:N:0:TAGCTT Contig429009 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4969:47883_1:N:0:TAGCTT Contig135488 2215 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4416:49475_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9743:49924_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15152:50412_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20219:50833_1:N:0:TAGCTT Contig204061 718 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8331:51157_1:N:0:TAGCTT Contig554278 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19317:51027_1:N:0:TAGCTT Contig41247 2548 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13825:51739_1:N:0:TAGCTT Contig651299 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13725:52606_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5365:52773_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17407:52781_1:N:0:TAGCTT Contig86417 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11277:53806_1:N:0:TAGCTT Contig71265 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15606:54833_1:N:0:TAGCTT Contig116847 802 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8539:55068_1:N:0:TAGCTT Contig506623 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8115:55858_1:N:0:TAGCTT Contig405379 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8025:56028_1:N:0:TAGCTT Contig550486 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20692:56248_1:N:0:TAGCTT Contig66689 12385 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13286:56282_1:N:0:TAGCTT Contig73937 5659 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18816:56982_1:N:0:TAGCTT Contig17038 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:21261:57234_1:N:0:TAGTTT Contig31440 1718 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:21195:58822_1:N:0:TAGCTT Contig651442 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7001:59586_1:N:0:TAGCTT Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:13371:60153_1:N:0:TAGCTT Contig585966 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5544:60353_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19325:60472_1:N:0:TAGCTT Contig14069 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1187:60545_1:N:0:TAGCTT Contig368699 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6414:60537_1:N:0:TAGCTT Contig181265 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:10731:61113_1:N:0:TAGCTT Contig358108 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12127:61272_1:N:0:TAGCTT Contig694092 118 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:20915:61460_1:N:0:TAGCTT Contig181265 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19139:61548_1:N:0:TAGCTT Contig498410 206 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8271:62647_1:N:0:TAGCTT Contig86417 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14683:64393_1:N:0:TAGCTT Contig126609 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4308:66952_1:N:0:TAGCTT Contig197376 615 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17011:66973_1:N:0:TAGCTT Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:10431:67027_1:N:0:TAGCTT Contig20845 3135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11855:67200_1:N:0:TAGCTT Contig578224 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18325:67089_1:N:0:TAGCTT Contig117682 2923 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2105:68241_1:N:0:TAGCTT Contig189406 293 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12305:68063_1:N:0:TAGCTT Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5787:68936_1:N:0:TAGCTT Contig79441 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12651:68893_1:N:0:TAGCTT Contig682568 77 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14667:69160_1:Y:0:TAGCTT Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4930:70529_1:N:0:TAGCTT Contig587005 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8826:71496_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18507:71273_1:N:0:TAGCTT Contig164120 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17912:71609_1:N:0:TAGCTT Contig504623 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9242:72404_1:N:0:TAGCTT Contig170226 476 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3866:73197_1:N:0:TAGCTT Contig385306 172 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7617:73094_1:N:0:TAGCTT Contig321506 117 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15811:73165_1:N:0:TAGCTT Contig290005 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2380:73670_1:N:0:TAGCTT Contig23656 784 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15445:73571_1:Y:0:TAGCTT Contig570368 122 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2798:73853_1:N:0:TAGCTT Contig37026 12201 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2729:74116_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1322:74374_1:N:0:TAGCTT Contig421351 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7215:74370_1:N:0:TAGCTT Contig542597 136 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17819:75043_1:N:0:TAGCTT Contig48797 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15252:75627_1:N:0:TAGCTT Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18589:75782_1:N:0:TAGCTT Contig393887 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18672:75978_1:N:0:TAGCTT Contig19272 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9442:76262_1:N:0:TAGCTT Contig165722 656 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9375:76666_1:N:0:TAGCTT Contig671570 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1562:77096_1:N:0:TAGCTT Contig509189 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14441:77359_1:N:0:TAGCTT Contig64114 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7809:77933_1:N:0:TAGCTT Contig680495 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12875:77800_1:N:0:TAGCTT Contig511090 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2695:78221_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17885:78232_1:N:0:TAGCTT Contig306106 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17235:78692_1:N:0:TAGCTT Contig221585 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16757:80034_1:N:0:TAGCTT Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2922:81302_1:N:0:TAGCTT Contig346524 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:4959:82122_1:Y:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12873:82224_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19691:82158_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:10052:82988_1:Y:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6397:83432_1:N:0:TAGCTT Contig64114 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18036:83835_1:N:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11911:84225_1:N:0:TAGCTT Contig28910 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3702:84408_1:N:0:TAGCTT Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15685:84889_1:N:0:TAGCTT Contig253583 201 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1763:85269_1:N:0:TAGCTT Contig129402 1532 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:9973:85941_1:N:0:TAGCTT Contig96916 2520 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15508:87375_1:N:0:TAGCTT Contig248693 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7322:87672_1:N:0:TAGCTT Contig176386 466 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:18180:87880_1:N:0:TAGCTT Contig179593 427 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:16792:88152_1:N:0:TAGCTT Contig34380 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2590:88308_1:N:0:TAGCTT Contig108128 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5375:88627_1:N:0:TAGCTT Contig178245 607 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:17457:89212_1:N:0:TAGCTT Contig88172 2576 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:8585:90187_1:N:0:TAGCTT Contig416251 144 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:5872:90258_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11458:90773_1:N:0:TAGCTT Contig157663 3161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19268:90841_1:N:0:TAGCTT Contig7715 7901 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2738:91367_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:12174:91903_1:N:0:TAGCTT Contig221585 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2927:92215_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6430:92006_1:N:0:TAGCTT Contig389486 235 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:15875:92194_1:N:0:TAGCTT Contig306106 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:6420:95859_1:N:0:TAGCTT Contig49739 5164 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11533:96319_1:N:0:TAGCTT Contig489528 95 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:2100:97381_1:N:0:TAGCTT Contig504192 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14388:97266_1:N:0:TAGCTT Contig39805 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:7643:97940_1:N:0:TAGCTT Contig312699 85 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1934:98470_1:N:0:TAGCTT Contig322052 402 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:19912:98408_1:N:0:TAGCTT Contig598681 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:11702:98734_1:N:0:TAGCTT Contig675203 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:1914:99838_1:Y:0:TAGCTT Contig116787 4480 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:14263:99881_1:N:0:TAGCTT Contig563731 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1103:3586:100263_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4013:2145_1:N:0:TAGCTT Contig372066 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14349:2457_1:N:0:TAGCTT Contig176831 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10287:2530_1:N:0:TAGCTT Contig606727 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17421:2742_1:N:0:TAGCTT Contig477766 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18038:3029_1:N:0:TAGCTT Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16333:3385_1:N:0:TAGCTT Contig374586 1688 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:19813:3272_1:Y:0:TAGCTT Contig446796 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13251:3619_1:N:0:TAGCTT Contig540856 94 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17430:4028_1:N:0:TAGCTT Contig393387 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7756:4658_1:N:0:TAGCTT Contig91898 1630 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7104:5060_1:N:0:TAGCTT Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16178:5749_1:N:0:TAGCTT Contig502333 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2343:5870_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4550:5794_1:N:0:TAGCTT Contig112006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5648:5818_1:Y:0:TAGCTT Contig102795 1154 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9302:5772_1:N:0:TAGCTT Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7979:6150_1:N:0:TAGCTT Contig141964 559 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10399:6208_1:Y:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20438:6991_1:Y:0:TAGCTT Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15959:7886_1:N:0:TAGCTT Contig16344 2259 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10140:8008_1:Y:0:TAGCTT Contig537205 120 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16698:8055_1:N:0:TAGCTT Contig123990 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14085:8328_1:N:0:TAGCTT Contig516897 89 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6918:8834_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7967:9086_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16736:9022_1:N:0:TAGCTT Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16201:9736_1:N:0:TAGCTT Contig360647 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9389:10568_1:N:0:TAGCTT Contig391218 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4908:10904_1:N:0:TAGCTT Contig13395 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11509:11431_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17629:12618_1:N:0:TAGCTT Contig597971 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16251:12860_1:N:0:TAGCTT Contig393611 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11812:13173_1:N:0:TAGCTT Contig124195 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:19353:13086_1:N:0:TAGCTT Contig112006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13125:13458_1:N:0:TAGCTT Contig255461 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12344:14099_1:N:0:TAGCTT Contig262974 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5546:14452_1:N:0:TAGCTT Contig521469 244 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7786:14416_1:Y:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6121:14542_1:N:0:TAGCTT Contig373202 106 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7695:15159_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3152:15288_1:N:0:TAGCTT Contig336741 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10074:15961_1:N:0:TAGCTT Contig467912 108 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4741:16155_1:N:0:TAGCTT Contig2131 20208 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14066:17043_1:N:0:TAGCTT Contig94812 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12844:17680_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4500:17961_1:N:0:TAGCTT Contig262974 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7497:18327_1:N:0:AAGCTT Contig227664 644 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6581:18596_1:N:0:TAGCTT Contig27922 26321 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9590:18927_1:N:0:TAGCTT Contig81137 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10553:20605_1:N:0:TAGCTT Contig35003 575 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14036:21105_1:N:0:TAGCTT Contig390563 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8816:21318_1:N:0:TAGCTT Contig393062 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12274:21603_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9737:21996_1:Y:0:TAGCTT Contig18716 78248 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7217:22082_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18935:22464_1:N:0:TAGCTT Contig306813 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2016:22784_1:N:0:TAGCTT Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8028:23838_1:N:0:TAGCTT Contig13974 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7582:24313_1:N:0:TAGCTT Contig42930 20368 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10151:25403_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18854:25463_1:N:0:TAGCTT Contig93207 2023 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12361:25631_1:N:0:TAGCTT Contig4032 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7194:26102_1:N:0:TAGCTT Contig182 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20343:26320_1:N:0:TAGCTT Contig15734 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:1426:27018_1:N:0:TAGCTT Contig158155 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5499:27101_1:N:0:TAGCTT Contig43880 6705 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13645:27830_1:N:0:TAGCTT Contig657637 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2555:29954_1:N:0:TAGCTT Contig605568 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8782:30080_1:N:0:TAGCTT Contig540856 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17323:30163_1:N:0:TAGCTT Contig414940 90 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3879:30786_1:N:0:TAGCTT Contig540856 93 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5148:30818_1:N:0:TAGCTT Contig440302 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16903:30981_1:N:0:TAGCTT Contig165074 802 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11435:31212_1:N:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13577:31120_1:N:0:TAGCTT Contig605232 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13524:31646_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6640:32006_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8991:32020_1:N:0:TAGCTT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11597:32651_1:N:0:TAGCTT Contig695568 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6350:32940_1:N:0:TAGCTT Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6971:33294_1:N:0:TAGCTT Contig569904 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10355:34386_1:N:0:TAGCTT Contig341757 214 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7927:34942_1:N:0:TAGCTT Contig51452 7799 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:19171:35704_1:N:0:TAGCTT Contig75355 2656 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15734:35874_1:N:0:TAGCTT Contig91898 1632 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15909:35996_1:N:0:TAGCTT Contig576950 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4842:36256_1:N:0:TAGCTT Contig4083 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6147:36387_1:N:0:TAGCTT Contig694656 82 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11366:36256_1:N:0:TAGCTT Contig453105 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2799:36740_1:N:0:TAGCTT Contig409460 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9601:37017_1:N:0:TAGCTT Contig58165 2668 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11779:37644_1:Y:0:TAGCTT Contig271925 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18730:37568_1:N:0:TAGCTT Contig180411 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8681:38089_1:N:0:TAGCTT Contig605232 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4546:38579_1:N:0:TAGCTT Contig610450 102 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11608:39134_1:N:0:TAGCTT Contig273735 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8798:41061_1:N:0:TAGCTT Contig125278 3050 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14635:41448_1:N:0:TAGCTT Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4322:42626_1:N:0:TAGCTT Contig498530 12153 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17755:42525_1:N:0:TAGCTT Contig485211 112 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3982:42820_1:N:0:TAGCTT Contig69363 2719 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12755:42889_1:N:0:TAGCTT Contig619524 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20675:43569_1:N:0:TATCTT Contig536407 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4198:44178_1:N:0:TAGCTT Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3534:44675_1:N:0:TAGCTT Contig419815 152 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20063:44690_1:N:0:TAGCTT Contig272891 132 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2414:44832_1:N:0:TAGCTT Contig396501 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16210:45514_1:Y:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20161:45849_1:N:0:TAGCTT Contig136795 9520 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:19933:46242_1:Y:0:TAGCTT Contig242785 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8508:46488_1:N:0:TAGCTT Contig565153 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5997:46587_1:N:0:TAGCTT Contig474092 82 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12260:47314_1:N:0:TAGCTT Contig125278 3050 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18389:47284_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20421:47522_1:N:0:TAGCTT Contig206689 1072 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18197:48052_1:N:0:TAGCTT Contig266248 90 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20424:48475_1:N:0:TAGCTT Contig357296 121 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8985:49215_1:N:0:TAGCTT Contig45803 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2758:49571_1:N:0:TAGCTT Contig79341 132 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10111:49712_1:Y:0:TAGCTT Contig87386 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12034:49580_1:N:0:TAGCTT Contig364897 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13243:49555_1:N:0:TAGCTT Contig562041 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:19588:49928_1:N:0:TAGCTT Contig1637 14982 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6115:50349_1:N:0:TAGCTT Contig352956 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15203:50497_1:N:0:TAGCTT Contig189406 293 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6895:50683_1:N:0:TAGCTT Contig31169 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8471:50557_1:N:0:TAGCTT Contig127394 5048 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15605:51682_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10042:51932_1:N:0:TAGCTT Contig121388 2737 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2434:53706_1:N:0:TAGCTT Contig212284 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11264:53526_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:4718:54296_1:N:0:TAGCTT Contig398227 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15531:54269_1:N:0:TAGCTT Contig76372 4475 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17032:54588_1:N:0:TAGCTT Contig221585 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17479:55018_1:N:0:TAGCTT Contig610450 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13460:55307_1:N:0:TAGCTT Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17121:55914_1:N:0:TAGCTT Contig515495 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15002:56294_1:N:0:TAGCTT Contig383229 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7705:56681_1:N:0:TAGCTT Contig608794 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8373:56529_1:N:0:TAGCTT Contig476118 99 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16761:56949_1:N:0:TAGCTT Contig19768 7470 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9748:57461_1:N:0:TAGCTT Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:19105:57420_1:N:0:TAGCTT Contig391428 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:1784:57836_1:N:0:TAGCTT Contig344467 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16243:57985_1:Y:0:TAGCTT Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16102:58215_1:N:0:TAGCTT Contig197166 543 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2140:59446_1:N:0:TAGCTT Contig687242 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14548:59350_1:N:0:TAGCTT Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13599:59967_1:N:0:TAGCTT Contig57360 6454 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5733:60350_1:N:0:TAGCTT Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12845:60333_1:Y:0:TAGCTT Contig99098 5112 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15713:60596_1:N:0:TAGCTT Contig252813 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12520:61172_1:N:0:TAGCTT Contig550486 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5604:61255_1:N:0:TAGCTT Contig651442 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12628:61728_1:N:0:TAGTTT Contig365270 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18738:61585_1:N:0:TAGCTT Contig666842 69 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:14052:61840_1:N:0:TAGCTT Contig45873 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9740:62369_1:N:0:TAGCTT Contig181265 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10312:63199_1:N:0:TAGCTT Contig211686 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13327:63305_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13319:63754_1:N:0:TAGCTT Contig133813 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:20829:63859_1:N:0:TAGCTT Contig126442 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:21090:63869_1:Y:0:TAGCTT Contig448194 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15971:64891_1:N:0:TAGCTT Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:10001:65333_1:N:0:TAGCTT Contig178294 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16768:66527_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:21275:66541_1:N:0:TAGCTT Contig521469 245 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:12227:66925_1:N:0:TAGCTT Contig671821 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:16694:67056_1:Y:0:TAGCTT Contig540856 94 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3418:67767_1:N:0:TAGCTT Contig130287 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2180:68310_1:Y:0:TAGCTT Contig73937 5659 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18011:68264_1:N:0:TAGCTT Contig76929 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:5293:69363_1:N:0:TAGCTT Contig507354 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:1371:69962_1:N:0:TAGCTT Contig693511 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:21134:70602_1:Y:0:TATCTT Contig426705 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11938:70840_1:N:0:TAGCTT Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:15208:71169_1:N:0:TAGCTT Contig137666 1392 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2319:71738_1:N:0:TAGCTT Contig191191 581 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:11418:71630_1:N:0:TAGCTT Contig344467 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9121:71788_1:N:0:TAGCTT Contig130068 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:8804:72553_1:N:0:TAGCTT Contig674522 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13639:72613_1:N:0:TAGCTT Contig441455 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:6696:72889_1:N:0:TAGCTT Contig318385 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:2357:73187_1:N:0:TAGCTT Contig403649 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18356:73425_1:N:0:TAGCTT Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3195:73871_1:N:0:TAGCTT Contig281767 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:13054:73845_1:N:0:TAGCTT Contig248693 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:17671:73750_1:N:0:TAGCTT Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:1633:74054_1:N:0:TAGCTT Contig556875 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:7391:74482_1:N:0:TAGCTT Contig445743 111 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:3428:74505_1:N:0:TAGCTT Contig86417 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:9588:74684_1:N:0:TAGCTT Contig125278 3050 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:2:1104:18984:74851_1:N:0:TAGCTT Contig160959 1176 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 649584 (64.96%) aligned 0 times 134594 (13.46%) aligned exactly 1 time 215822 (21.58%) aligned >1 times 35.04% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 645051 (64.51%) aligned 0 times 138648 (13.86%) aligned exactly 1 time 216301 (21.63%) aligned >1 times 35.49% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 650725 (65.07%) aligned 0 times 134715 (13.47%) aligned exactly 1 time 214560 (21.46%) aligned >1 times 34.93% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 643786 (64.38%) aligned 0 times 137982 (13.80%) aligned exactly 1 time 218232 (21.82%) aligned >1 times 35.62% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files zr1394_10_s456_trimmed.fq.gz_C_to_T.fastq and zr1394_10_s456_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 349287 Mapping efficiency: 34.9% Final Cytosine Methylation Report ================================= Total number of C's analysed: 2181648 Total methylated C's in CpG context: 342902 Total methylated C's in CHG context: 9337 Total methylated C's in CHH context: 101372 Total methylated C's in Unknown context: 81 Total unmethylated C's in CpG context: 59857 Total unmethylated C's in CHG context: 471881 Total unmethylated C's in CHH context: 1196299 Total unmethylated C's in Unknown context: 373 C methylated in CpG context: 85.1% C methylated in CHG context: 1.9% C methylated in CHH context: 7.8% C methylated in Unknown context (CN or CHN): 17.8% Bismark completed in 0d 3h 13m 42s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_11_s456_trimmed.fq.gz Writing a C -> T converted version of the input file zr1394_11_s456_trimmed.fq.gz to zr1394_11_s456_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file zr1394_11_s456_trimmed.fq.gz to zr1394_11_s456_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file zr1394_11_s456_trimmed.fq.gz (1000001 sequences in total) Input files are zr1394_11_s456_trimmed.fq.gz_C_to_T.fastq and zr1394_11_s456_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from zr1394_11_s456_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-C00124:164:C7URDANXX:1:1101:1243:2134_1:N:0:GGCTAC 4 * 0 0 * * 0 0 TATTGATATTATAATTATTTTTTTTTATAT >> Writing bisulfite mapping results to zr1394_11_s456_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_11_s456_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1473:2216_1:Y:0:GGCTAC Contig681402 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14255:6719_1:Y:0:GGCTAC Contig16579 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19966:6705_1:Y:0:GGCTAC Contig399597 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16216:7029_1:N:0:GGCTAC Contig566515 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5576:7640_1:N:0:GGCTAC Contig69363 2722 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19087:8223_1:N:0:GGCTAC Contig166416 644 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11492:8353_1:N:0:GGCTAC Contig462124 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7749:8652_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2851:10379_1:N:0:GGCTAC Contig221661 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10899:11457_1:N:0:GGCTAC Contig181140 1032 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3090:11743_1:N:0:GGCTAC Contig79433 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7036:12377_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10769:12732_1:N:0:GGCTAC Contig373054 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4626:12879_1:N:0:GGCTAC Contig199403 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19915:12855_1:N:0:GGCTAC Contig669933 180 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4504:13410_1:N:0:GGCTAC Contig544105 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3861:14425_1:N:0:AGCTAC Contig303333 69 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19317:14571_1:N:0:GGCTAC Contig428369 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17063:14837_1:N:0:GGCTAC Contig505390 76 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6078:15169_1:Y:0:TGCTAC Contig34874 6753 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11069:15196_1:N:0:GGCTAC Contig501995 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12945:15123_1:N:0:GGCTAC Contig88172 2575 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15830:15364_1:N:0:GGCTAC Contig160772 1044 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9503:15628_1:N:0:GGCTAC Contig615498 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3958:16179_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12643:16097_1:N:0:GGCTAC Contig456483 115 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4927:16578_1:N:0:GGCTAC Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6909:16606_1:N:0:GGCTAC Contig387620 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14913:16592_1:N:0:GGCTAC Contig628534 105 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8463:18878_1:Y:0:GGCTAC Contig501995 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1418:20194_1:N:0:TGCTAC Contig562656 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5529:20081_1:N:0:GGCTAC Contig274743 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11353:21033_1:Y:0:AGCTAC Contig655755 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9279:22782_1:N:0:GGCTAC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18631:23762_1:N:0:GGCTAC Contig278108 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2516:24779_1:N:0:GGCTCC Contig50880 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9683:25654_1:N:0:GGCTAC Contig325954 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8671:26031_1:Y:0:GGCTAC Contig199221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7305:26540_1:N:0:GGCTAC Contig92262 5016 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14540:26740_1:N:0:GGCTAC Contig506709 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3877:27177_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17510:28119_1:Y:0:GGCTAC Contig96316 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5548:28305_1:N:0:GGCTAC Contig145976 724 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17642:28566_1:N:0:GGCTAC Contig523701 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2974:28971_1:N:0:GGCTAC Contig186395 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2873:33520_1:N:0:GGCTAC Contig165074 800 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16139:34034_1:N:0:GGCTAC Contig201671 427 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16240:34625_1:N:0:GGCTAC Contig87822 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15455:36985_1:N:0:GGCTAC Contig503712 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3774:37217_1:Y:0:GGCTAC Contig306106 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17041:37255_1:Y:0:GGCTCC Contig19434 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3352:37711_1:N:0:GGCTAC Contig87676 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14957:39007_1:N:0:GGCTAC Contig181265 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6611:40216_1:N:0:GGCTAC Contig197376 616 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20309:40394_1:N:0:AGCTAC Contig515495 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19383:41248_1:Y:0:GGCTAC Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6499:41408_1:N:0:GGCTAC Contig450378 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6353:41646_1:N:0:GGCTAC Contig501279 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15182:41676_1:N:0:GGCTAC Contig654316 144 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15326:41616_1:N:0:GGCTAC Contig403272 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3332:42051_1:N:0:GGCTAC Contig673557 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4279:42719_1:Y:0:GGCTAC Contig538344 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6400:42763_1:N:0:GGCTAC Contig72001 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15588:43324_1:N:0:GGCTAC Contig180297 484 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16245:43596_1:Y:0:GGCTAC Contig62815 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17894:43824_1:N:0:GGCTAC Contig651489 69 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8880:44827_1:N:0:GGCTAC Contig137637 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16280:44983_1:N:0:GGCTAC Contig330842 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16575:45479_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18719:45852_1:N:0:GGCTAC Contig135488 2214 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20505:45981_1:N:0:GGCTAC Contig178294 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10228:46910_1:N:0:GGCTAC Contig140590 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3674:47047_1:N:0:GGCTAC Contig150484 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7341:47633_1:N:0:GGCTAC Contig579812 703 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19578:47959_1:N:0:GGCTAC Contig275571 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18132:48505_1:N:0:GGCTAC Contig181967 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4239:49163_1:N:0:GGCTAC Contig170477 912 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10178:49410_1:N:0:GGCTAC Contig690916 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9871:49501_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19850:50302_1:Y:0:GGCTAT Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19950:50952_1:N:0:GGCTAC Contig367750 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13140:52059_1:N:0:GGCTAC Contig193909 282 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15738:52267_1:N:0:AGCTAC Contig349057 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4041:52573_1:N:0:GGCTAC Contig306106 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10071:53140_1:N:0:GGCTAC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18235:53280_1:N:0:GGCTAC Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3109:54060_1:N:0:GGCTAC Contig647292 139 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4442:54399_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20345:54691_1:N:0:GGCTAC Contig350296 76 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7834:54763_1:N:0:GGCTAC Contig88172 2576 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10949:56304_1:N:0:GGCTAC Contig451267 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:21022:58143_1:Y:0:GGCTAC Contig542597 138 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7185:60437_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16313:60463_1:N:0:GGCTAC Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18858:60653_1:N:0:GGCTAC Contig203925 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3026:61346_1:N:0:GGCTAC Contig12186 348 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7738:61743_1:N:0:AGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2317:62097_1:N:0:GGCTAC Contig418344 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18198:62421_1:Y:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14122:62852_1:N:0:GGCTAC Contig691198 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6148:63180_1:N:0:GGCTAC Contig26806 9431 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8266:63911_1:Y:0:GGCTAC Contig255417 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7168:64298_1:N:0:GGCTAC Contig670510 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16954:65137_1:N:0:GGCTAC Contig450953 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2822:66469_1:N:0:GGCTAC Contig314563 76 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16649:66713_1:N:0:GGCTAC Contig695733 114 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16030:66780_1:N:0:AGCTAC Contig176831 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12923:67034_1:N:0:GGCTAC Contig216334 914 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15425:70943_1:N:0:GGCTAC Contig373202 104 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12288:71526_1:N:0:GGCTAC Contig509943 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19592:71903_1:N:0:GGCTAC Contig27922 26321 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6411:72419_1:N:0:GGCTAC Contig691454 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11862:73144_1:N:0:GTCTAC Contig130735 14296 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4815:74051_1:N:0:GGCTAC Contig388199 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2318:74991_1:N:0:GGCTAC Contig356374 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15367:77877_1:N:0:GGCTAC Contig663678 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12707:78320_1:N:0:AGCTAC Contig49739 5163 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14016:78658_1:N:0:GGCTAC Contig196754 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17559:78564_1:N:0:GGCTAC Contig96316 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4285:79759_1:N:0:GGCTAC Contig467912 108 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15987:79779_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16173:80107_1:N:0:GGCTAC Contig433015 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20010:80898_1:N:0:GGCTAC Contig151131 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5468:81812_1:N:0:GGCTAC Contig16985 786 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18195:81952_1:N:0:GGCTAC Contig540856 93 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15673:83155_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2881:84127_1:N:0:GGCTAC Contig100175 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20676:85693_1:N:0:GGCTAC Contig294033 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15398:85811_1:N:0:GGCTAC Contig33090 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5789:87642_1:N:0:GGCTAC Contig60600 19000 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19333:87887_1:N:0:GGCTAC Contig22621 6888 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6307:88096_1:N:0:GGCTAC Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7018:88906_1:N:0:GGCTAC Contig647227 110 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16909:89738_1:N:0:GGCTAC Contig9595 3523 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13999:89764_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17065:89989_1:N:0:GGCTAC Contig175206 744 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5844:90578_1:N:0:GGCTAC Contig31231 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6343:90693_1:N:0:GGCTAC Contig70429 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16141:92035_1:N:0:GGCTAC Contig312918 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3526:93898_1:N:0:GGCTAC Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1720:94175_1:Y:0:AGCTAC Contig413700 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17305:94782_1:N:0:GGCTAC Contig363728 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19156:94943_1:N:0:GGCTAC Contig323794 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17983:95034_1:N:0:GGCTAC Contig89673 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17862:95064_1:N:0:GGCTAC Contig542597 134 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3941:95490_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7746:95350_1:N:0:GGCTAC Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12807:95867_1:N:0:GGCTAC Contig230719 264 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15094:96120_1:N:0:GGCTAC Contig8270 1000 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19420:97256_1:N:0:GGCTAC Contig169258 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20203:97713_1:N:0:GGCTAC Contig74632 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20599:98702_1:N:0:GGCTAC Contig662329 77 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5453:99049_1:N:0:GGCTAC Contig231406 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18330:99151_1:N:0:GGCTAC Contig479741 236 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9523:99467_1:N:0:GGCTAC Contig523940 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8179:2765_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19413:3274_1:N:0:GGCTAC Contig322890 225 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:21273:3752_1:N:0:GGCTAC Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15845:4112_1:N:0:AGCTAC Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6362:4611_1:N:0:GGCTAC Contig341961 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4431:4767_1:N:0:GGCTAC Contig125278 3049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13374:5497_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9360:5751_1:Y:0:GGCTAA Contig647292 139 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5584:7365_1:N:0:AGCTAC Contig307182 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13188:7436_1:N:0:GGCTAC Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16630:7855_1:N:0:AGCTAC Contig393387 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20713:8945_1:Y:0:TGCTAC Contig536501 427 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16706:9015_1:N:0:GGCTAC Contig6672 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4070:9291_1:N:0:GGCTAC Contig268594 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13662:10011_1:N:0:GGCTAC Contig675316 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19726:10107_1:N:0:GGCTAC Contig613909 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9085:10778_1:N:0:GGCTAC Contig512524 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8426:11457_1:N:0:GGCTAC Contig21899 615 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5618:11504_1:N:0:GGCTAC Contig88172 2576 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10474:12386_1:N:0:GGCTAC Contig119413 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12638:12602_1:N:0:GGCTAC Contig96628 1442 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2350:13170_1:N:0:GGCTAC Contig105161 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20405:14063_1:N:0:GGCTAC Contig215795 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18188:14449_1:N:0:GGCTAC Contig89673 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1792:14533_1:N:0:GGCTAC Contig499018 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12850:19801_1:N:0:GGCTAC Contig268133 130 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15135:19979_1:N:0:GGCTAC Contig396501 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1769:20503_1:N:0:GGCTAC Contig464396 4661 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3927:20993_1:N:0:GGCTAC Contig542597 137 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5036:21025_1:N:0:GGCTAC Contig187358 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4751:21851_1:N:0:GGCTAC Contig150257 2534 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12656:21880_1:N:0:AGCTAC Contig36268 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14010:22487_1:N:0:AGCTAC Contig540856 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17797:23220_1:N:0:GGCTAC Contig81159 3116 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18134:23238_1:N:0:GGCTAC Contig534659 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20384:23883_1:N:0:GGCTAC Contig81175 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5239:24136_1:N:0:GGCTAC Contig112006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13092:24428_1:N:0:GGCTAC Contig1221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14029:25132_1:N:0:GGCTAC Contig523531 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17470:25881_1:N:0:GGCTAC Contig157330 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20281:25886_1:N:0:AGCTAC Contig179829 4463 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20994:25806_1:N:0:GGCTAC Contig134311 1416 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18033:26115_1:N:0:GGCTAC Contig528434 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15728:26408_1:N:0:AGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3585:26636_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15951:26971_1:N:0:GGCTAC Contig687180 77 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14288:27145_1:N:0:GGCTAC Contig258684 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20758:29782_1:N:0:GGCTAC Contig585564 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11798:30475_1:N:0:GGCTAC Contig279960 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14229:31739_1:N:0:GGCTAC Contig25534 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19798:31656_1:N:0:GGCTAC Contig658316 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14848:33473_1:N:0:GGCTAC Contig504192 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18092:33570_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7229:33793_1:N:0:GGCTAC Contig212087 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15530:35584_1:N:0:GGCTAC Contig411065 69 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14001:36950_1:N:0:GGCTAC Contig165179 511 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1698:37143_1:N:0:GGCTAC Contig60519 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10717:37293_1:N:0:GGCTAC Contig138423 7685 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4149:37516_1:N:0:GGCTAC Contig649058 306 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5358:37784_1:N:0:GGCTAC Contig84439 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8559:37860_1:N:0:GGCTAC Contig181069 784 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20890:39062_1:N:0:GGCTAC Contig112006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18519:41164_1:N:0:GGCTAC Contig133832 670 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8083:42338_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:21130:42333_1:N:0:GGCTAC Contig596500 121 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7006:44283_1:N:0:GGCTAC Contig386907 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17592:45752_1:N:0:AGCTAC Contig205919 461 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8559:48158_1:Y:0:GGCTAC Contig673557 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14563:48840_1:Y:0:GGCTAC Contig233955 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12149:49774_1:N:0:GGCTAC Contig492106 459 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20077:50073_1:N:0:GGCTAC Contig639220 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2055:50393_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3129:50986_1:N:0:GGCTAC Contig392428 991 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4907:51636_1:N:0:GGCTAC Contig560077 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20821:51692_1:Y:0:GGCTAC Contig287021 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9456:51830_1:N:0:TGCTAC Contig397503 186 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3539:52335_1:N:0:GGCTAC Contig610493 99 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1822:53945_1:N:0:AGCTAC Contig189406 292 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7888:54406_1:N:0:GGCTAC Contig589103 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6920:54565_1:N:0:GGCTAC Contig195422 358 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4074:54955_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9272:55365_1:N:0:GGCTAC Contig20834 2171 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4413:56045_1:N:0:GGCTAC Contig208806 730 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5138:56852_1:N:0:AGCTAC Contig585564 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4163:57551_1:N:0:GGCTAC Contig201334 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7747:57659_1:N:0:GGCTAC Contig165074 802 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16481:57657_1:N:0:GGCTAC Contig306106 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1186:60942_1:Y:0:GGCTAC Contig553625 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2878:60763_1:N:0:GGCTAC Contig906 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13214:62147_1:N:0:GGCTAC Contig564182 119 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18452:62033_1:N:0:GGCTAC Contig160772 1044 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7566:62388_1:N:0:AGCTAC Contig496352 375 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11421:64346_1:N:0:GGCTAC Contig275630 107 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6550:64622_1:N:0:GGCTAC Contig171321 393 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:21035:65695_1:N:0:GGCTAC Contig126695 3026 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10430:66245_1:N:0:AGCTAC Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6288:66789_1:N:0:GGCTAC Contig672031 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3602:67640_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15332:68000_1:N:0:GGCTAC Contig87822 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12871:68537_1:N:0:GGCTAC Contig260003 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13540:68701_1:N:0:GGCTAC Contig205762 9561 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9511:68816_1:N:0:GGCTAC Contig606727 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13857:69228_1:N:0:GGCTAC Contig328221 134 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6623:70704_1:N:0:GGCTAC Contig337260 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3145:71092_1:N:0:GGCTAC Contig48907 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18728:71061_1:N:0:GGCTAC Contig607800 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15637:71415_1:N:0:GGCTAC Contig142 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4003:71503_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17497:71824_1:N:0:GGCTAC Contig587005 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4127:72021_1:N:0:GGCTAC Contig647292 139 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20425:72083_1:N:0:GGCTAC Contig268133 130 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9795:72528_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3823:72995_1:N:0:GGCTAC Contig235004 653 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17951:72793_1:N:0:GGCTAC Contig290008 76 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7320:73074_1:N:0:GGCTAC Contig279822 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9405:73533_1:N:0:GGCTAC Contig36226 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1447:73989_1:N:0:GGCTAC Contig645560 111 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10399:73916_1:N:0:AGCTAC Contig677293 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14519:75467_1:N:0:GGCTAC Contig585966 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12634:75605_1:N:0:GGCTAC Contig219714 131 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13833:75738_1:N:0:GGCTAC Contig86774 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4948:75822_1:N:0:GGCTAC Contig145976 724 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2735:76334_1:Y:0:GGCTAC Contig322052 402 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19076:76441_1:Y:0:GGCTAC Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1189:79215_1:N:0:GGCTAC Contig687715 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17184:79019_1:N:0:GGCTAC Contig441455 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8624:79910_1:N:0:GGCTAC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9337:82542_1:N:0:GGCTAC Contig393446 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15932:82793_1:N:0:GGCTAC Contig384278 300 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15860:84073_1:N:0:GGCTAC Contig195669 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16569:84118_1:N:0:AGCTAC Contig262974 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7293:85688_1:N:0:GGCTAC Contig622176 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7833:85733_1:N:0:GGCTAC Contig167723 9214 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19859:86173_1:N:0:GGCTAC Contig51323 6097 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13929:86829_1:N:0:GGCTAC Contig50387 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11555:88167_1:N:0:GGCTAC Contig523940 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18457:90878_1:N:0:GGCTAC Contig20442 18467 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9017:91336_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5966:91794_1:N:0:GGCTAC Contig258684 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10927:92786_1:N:0:GGCTAC Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1831:93520_1:N:0:GGCTAC Contig429948 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12925:93529_1:N:0:GGCTAC Contig154364 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16981:93628_1:N:0:GGCTAC Contig623426 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14911:93950_1:N:0:GGCTAC Contig610835 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10661:94252_1:N:0:GGCTAC Contig189406 293 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7713:95174_1:Y:0:GGCTAC Contig597668 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14319:95760_1:N:0:GGCTAC Contig53968 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2786:96561_1:N:0:GGCTAC Contig13974 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16181:97722_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3143:97990_1:N:0:GGCTAC Contig76988 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9459:98116_1:N:0:GGCTAC Contig88172 2575 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11359:99385_1:N:0:GGCTAC Contig587005 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9554:99590_1:N:0:GGCTAC Contig504093 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:19704:3880_1:N:0:GGCTAC Contig358118 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15655:5420_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15928:5302_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11384:6149_1:N:0:GGCTTC Contig63641 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17805:6355_1:N:0:GACTAC Contig424212 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15840:6544_1:N:0:GGCTAC Contig185168 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11724:8457_1:N:0:GGCTAC Contig134863 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5784:9351_1:N:0:GGCTAC Contig393611 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20675:10424_1:Y:0:GACTAC Contig51781 8165 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11141:10539_1:N:0:GGCTAC Contig166218 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14326:10585_1:Y:0:TGCTAC Contig558169 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10490:11143_1:N:0:GGCTAC Contig65920 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13200:11063_1:N:0:GGCTAC Contig130628 1632 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4527:11264_1:N:0:GGCTAC Contig659727 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:2798:11738_1:N:0:AGCTAC Contig658743 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5479:11669_1:N:0:GGCTAC Contig332375 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11191:11513_1:N:0:GGCTAC Contig87508 2148 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9335:12589_1:N:0:GGCTAC Contig215392 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5056:12750_1:N:0:GGCTAC Contig349599 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14786:12767_1:N:0:GGCTAC Contig289013 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4696:13365_1:N:0:AGCTAC Contig445420 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17434:14080_1:N:0:AGCTAC Contig185327 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10381:14808_1:N:0:GGCTAC Contig211617 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10654:15888_1:N:0:GGCTAC Contig157194 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9523:16069_1:N:0:GGCTAC Contig70429 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12901:16546_1:N:0:GGCTAC Contig603695 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10552:16976_1:N:0:GGCTCC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1569:17157_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13529:18807_1:N:0:GGCTAC Contig106189 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13566:20148_1:N:0:GGCTAC Contig112006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17610:20008_1:N:0:GGCTAC Contig200556 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16502:20507_1:N:0:GGCTAC Contig660848 114 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20020:21079_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:8002:21927_1:N:0:GGCTAC Contig496352 373 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:6433:22091_1:N:0:GGCTAC Contig135382 1912 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12088:24230_1:N:0:AGCTAC Contig4393 6480 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16578:24175_1:N:0:GGCTAC Contig354446 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13069:25155_1:N:0:GGCTAC Contig120352 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12613:25373_1:N:0:GGCTAC Contig276556 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7141:25578_1:N:0:GGCTAC Contig7715 7901 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17046:25525_1:Y:0:GGCTAC Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4351:25835_1:N:0:GGCTAC Contig5906 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12750:26193_1:N:0:GGCTAC Contig326333 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14093:26291_1:N:0:GGCTAC Contig433146 646 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:2597:26615_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:3862:26584_1:N:0:GGCTAC Contig114989 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12062:26540_1:N:0:GGCTAC Contig479741 236 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13468:27845_1:N:0:GGCTAC Contig169127 2442 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:2433:29673_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16857:30206_1:N:0:GGCTAC Contig1221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:2537:30654_1:N:0:GGCTAC Contig645560 109 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13413:30641_1:N:0:GGCTAC Contig61033 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13469:31082_1:N:0:GGCTAC Contig505463 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14460:33350_1:N:0:GGCTAC Contig213627 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14964:33953_1:N:0:GGCTAC Contig86532 6022 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12528:35021_1:N:0:GGCTAC Contig262974 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:3188:35353_1:N:0:GGCTAC Contig306106 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7824:37089_1:N:0:GGCTAC Contig666202 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:21083:38302_1:N:0:GGCTAC Contig600751 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10334:38704_1:N:0:GGCTAC Contig480782 204 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4647:39592_1:Y:0:GACTAC Contig471647 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16912:40558_1:N:0:GACTAC Contig61033 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13565:41075_1:N:0:GGCTAC Contig355919 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7586:41981_1:N:0:GGCTAC Contig298422 110 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:3297:42059_1:N:0:GGCTAC Contig157385 1105 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5431:42033_1:N:0:GGCTAC Contig192366 419 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11561:42777_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7789:43116_1:N:0:GGCTAC Contig201334 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14881:43187_1:N:0:AGCTAC Contig534659 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7248:45377_1:N:0:GGCTAC Contig54916 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10188:45292_1:N:0:GGCTAC Contig404990 77 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:19641:47911_1:N:0:GGCTAC Contig113038 1089 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:18743:48707_1:N:0:AGCTAC Contig20442 18467 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7881:49461_1:N:0:GGCTAC Contig186481 2339 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:8391:50087_1:N:0:GGCTAC Contig197376 616 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13724:51709_1:N:0:GGCTAC Contig125278 3049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1688:52587_1:N:0:AGCTAC Contig165074 801 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15450:53428_1:N:0:GGCTAC Contig596479 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1765:53518_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:18042:54210_1:N:0:GGCTAC Contig667045 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20033:54607_1:N:0:GGCTAC Contig201025 1568 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20584:54826_1:N:0:GGCTAC Contig89937 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:6708:55041_1:Y:0:GGCTAC Contig322052 402 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9094:55646_1:N:0:GGCTAC Contig673557 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7455:55863_1:N:0:GGCTAC Contig138423 7685 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11776:56379_1:N:0:GGCTAC Contig86685 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15697:56294_1:N:0:GGCTAC Contig73089 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5521:57279_1:N:0:GGCTAC Contig504645 120 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10816:57847_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4379:58077_1:N:0:GGCTAC Contig403699 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:18159:58376_1:N:0:AGCTAC Contig17805 256 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12357:59061_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9846:59352_1:N:0:GGCTAC Contig687715 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13833:59563_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14612:61250_1:N:0:GGCTAC Contig189307 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:6675:62371_1:N:0:GGCTAC Contig602181 103 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4883:63816_1:N:0:GGCTAC Contig165074 800 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16867:64984_1:N:0:GGCCAC Contig465403 97 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:3908:65489_1:N:0:GGCTAC Contig441455 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12563:66106_1:N:0:GGCTAC Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7746:66683_1:N:0:GGCTAC Contig493006 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:8876:66521_1:N:0:GGCTAC Contig483460 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15258:66506_1:N:0:GGCTAC Contig46816 8306 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16308:68126_1:N:0:GGCTAC Contig260692 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17237:68219_1:N:0:GGCTAC Contig294813 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13679:68438_1:N:0:GGCTAC Contig27277 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20069:68535_1:N:0:GGCTAC Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:6674:68911_1:N:0:GGCTAC Contig165074 805 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1500:70605_1:N:0:GGCTAC Contig562656 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13033:70677_1:N:0:AGCTAC Contig587005 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14178:71272_1:N:0:GGCTAC Contig200556 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:16279:72231_1:Y:0:GCCTAC Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14855:72361_1:N:0:GGCTAC Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10229:73364_1:N:0:GGCTAC Contig9115 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:18712:74728_1:N:0:GGCTAC Contig673444 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5413:74871_1:N:0:GGCTAC Contig290 36267 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20209:75193_1:N:0:GGCTAC Contig476275 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13267:76171_1:N:0:GGCTAC Contig290 36268 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:13762:76857_1:N:0:GGCTAC Contig307270 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:10213:77492_1:N:0:GGCTAC Contig291999 103 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4502:78503_1:N:0:GGCTAC Contig284213 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14396:78735_1:N:0:GGCTAC Contig619524 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:8203:79105_1:N:0:GGCTAC Contig31231 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4371:79729_1:N:0:GGCTAC Contig281104 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5056:79708_1:N:0:AGCTAC Contig40175 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15620:79883_1:N:0:GGCTAC Contig93712 7694 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5888:80517_1:N:0:GGCTAC Contig358108 89 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14807:80521_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:8971:81067_1:N:0:GGCTAC Contig361754 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14554:81708_1:N:0:GGCTAC Contig416040 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14535:84086_1:Y:0:GGCTAC Contig131159 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5071:84725_1:N:0:GGCTAC Contig499018 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9976:84678_1:N:0:GGCTAC Contig16579 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14187:86419_1:N:0:AGCTAC Contig542597 136 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9472:87126_1:N:0:GGCTAC Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20574:88629_1:N:0:GGCTAC Contig160772 1045 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:18862:88850_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:7667:89112_1:N:0:GGCTAC Contig409887 217 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:2354:89726_1:N:0:GGCTAC Contig27922 26321 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:12725:90801_1:N:0:AGCTAC Contig452904 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:19867:90956_1:Y:0:TGCTAC Contig163913 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:2512:91187_1:N:0:GGCTAC Contig538057 650 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:9110:91590_1:N:0:GGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14997:92680_1:N:0:GGCTAC Contig127394 5048 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:18087:92679_1:N:0:GGCTAC Contig242743 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4387:94495_1:N:0:GGCTAC Contig235004 648 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17506:94614_1:N:0:AGCTAC Contig672031 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:3435:95218_1:N:0:AGCTAC Contig563479 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:5305:95163_1:N:0:GGCTAC Contig392164 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:19956:95199_1:N:0:GGCTAC Contig97019 11513 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11632:95957_1:N:0:AGCTAC Contig316024 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:17639:96088_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:14689:96618_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1663:96922_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1899:97830_1:N:0:AGCTAC Contig496057 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:1856:98165_1:N:0:GGCTAC Contig114749 893 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11713:98124_1:N:0:GGCTAC Contig125278 3049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:20025:99664_1:Y:0:AGCTAC Contig455761 94 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:12148:3308_1:N:0:GGCTAC Contig53330 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3869:3628_1:Y:0:GGCTAC Contig365277 168 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:10249:4184_1:N:0:GGCTAC Contig138423 7685 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8873:4958_1:N:0:GGCTAC Contig110763 5595 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:5353:5256_1:N:0:GGCTAC Contig34051 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1327:5841_1:N:0:GGCTAC Contig87508 2148 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4373:6979_1:N:0:GGCTAC Contig50880 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3491:7919_1:N:0:GGCTAC Contig562656 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:11852:7985_1:N:0:GGCTAC Contig177090 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:15535:8726_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:21251:8622_1:N:0:AGCTAC Contig112006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2058:9356_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:5074:9646_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13015:10062_1:N:0:GGCTAC Contig49739 5162 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16647:11278_1:N:0:GGCTAC Contig137637 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1734:11670_1:N:0:GGCTAC Contig367562 115 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13256:11774_1:N:0:GGCTAC Contig503172 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4764:13577_1:N:0:AGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4352:15143_1:N:0:GGCTAC Contig382328 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8160:16182_1:N:0:GGCTAC Contig669750 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13396:16112_1:N:0:GGCTAC Contig558169 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:7034:16472_1:N:0:GGCTAC Contig537805 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17015:16798_1:N:0:GGCTAT Contig58063 9823 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16979:17005_1:N:0:AGCTAC Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1623:17591_1:N:0:GGCTAC Contig55734 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4115:17771_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:15554:17762_1:N:0:GGCTAC Contig9115 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2605:18397_1:N:0:AGCTAC Contig22621 6888 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:7378:18299_1:N:0:GGCTAC Contig189406 291 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:14279:18433_1:N:0:GGCTAC Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17479:19404_1:N:0:GGCTAC Contig327359 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13956:20000_1:N:0:GGCTAC Contig647292 139 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17443:21416_1:N:0:AGCTAC Contig335596 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3103:23302_1:N:0:GGCTAC Contig588319 132 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3334:23259_1:N:0:GGCTAC Contig558169 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3977:23366_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:14906:23794_1:N:0:GGCTAC Contig86766 2314 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:6992:24599_1:N:0:GGCTAC Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:14881:25578_1:N:0:GGCTAC Contig3337 17934 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:10920:26476_1:Y:0:GGCTAC Contig12396 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:12970:26423_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16832:27364_1:N:0:AGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16153:27827_1:N:0:GGCTAC Contig87508 2149 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:9470:28151_1:N:0:GGCTAC Contig141964 560 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:11492:30465_1:N:0:GGCTAC Contig343599 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:5946:30799_1:N:0:GGCTAC Contig184372 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:15380:31982_1:N:0:AGCTAC Contig542597 134 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:15546:32042_1:N:0:GGCTAC Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17643:32036_1:N:0:GGCTAC Contig3611 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8633:32395_1:N:0:GGCTAC Contig562656 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:19885:32254_1:N:0:GGCTAC Contig235817 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4993:36675_1:N:0:GGCTAC Contig622176 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:9568:37397_1:N:0:AGCTAC Contig3611 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2419:41183_1:N:0:GGCTAC Contig79991 2342 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8700:41009_1:N:0:GGCTAC Contig650014 95 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2299:43378_1:N:0:GGCTAC Contig125278 3049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16783:45193_1:Y:0:GTCTAC Contig172404 583 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:11501:45319_1:N:0:GGCTAC Contig124133 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8055:46200_1:N:0:GGCTAC Contig312699 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:19608:47427_1:N:0:GGCTAC Contig501279 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1574:48766_1:N:0:GGCTAC Contig617493 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1616:49224_1:N:0:GGCTAC Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17424:49306_1:Y:0:AGCTAC Contig560077 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:12827:50624_1:N:0:GGCTAC Contig180540 879 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:18851:50681_1:N:0:GGCTAC Contig172770 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:9738:53050_1:N:0:GGCTAC Contig289455 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20287:53362_1:Y:0:GGCTAC Contig40531 13666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13228:55442_1:N:0:GGCTAC Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17115:56784_1:N:0:AGCTAC Contig672031 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:6439:57171_1:N:0:GGCTAC Contig585564 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:9279:57232_1:N:0:GGCTAC Contig46519 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:11272:57164_1:N:0:GGCTAC Contig590449 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:6225:58044_1:N:0:GGCTAC Contig635415 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:19973:58163_1:N:0:GGCTAC Contig189370 707 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:7417:58551_1:N:0:GGCTAC Contig450953 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:14981:59085_1:N:0:GGCTAC Contig673557 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:5608:59333_1:N:0:GGCTAC Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20527:59661_1:N:0:GGCTAC Contig213364 719 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4266:59793_1:N:0:GGCTAC Contig662194 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16460:60296_1:N:0:GGCTAC Contig606186 232 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:5623:61595_1:N:0:GGCTAC Contig23681 386 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1221:61871_1:N:0:GGCTAC Contig98835 1382 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:19236:63472_1:N:0:GGCTAC Contig426367 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17672:63845_1:N:0:GGCTAC Contig552550 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:12045:64077_1:N:0:GGCTAC Contig513173 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:14716:64204_1:N:0:GGCTAC Contig149517 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8661:65260_1:N:0:GGCTAC Contig146939 2196 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:10713:66321_1:N:0:GGCTAC Contig347159 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1239:66908_1:Y:0:AGCTAC Contig237630 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2373:67411_1:N:0:GGCTAC Contig418820 100 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:6478:68089_1:N:0:GGCTAC Contig451107 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8184:68303_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13301:69251_1:N:0:GGCTAC Contig255417 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8287:69630_1:N:0:GGCTAC Contig504192 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4016:70417_1:N:0:GGCTAC Contig484986 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:13230:70585_1:N:0:AGCTAC Contig312226 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1617:70865_1:N:0:GGCTAC Contig59760 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:5202:71310_1:N:0:GGCTAC Contig171283 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16880:71719_1:N:0:GGCTAC Contig349686 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:18087:71916_1:N:0:GGCTAC Contig441455 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:4397:72324_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2836:74562_1:N:0:GGCTAC Contig37313 160 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3476:75311_1:N:0:GGCTAC Contig71265 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8693:75718_1:N:0:AGCTAC Contig165074 799 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:9905:75855_1:N:0:GGCTAC Contig585302 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20055:78896_1:N:0:GGCTAC Contig612634 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:11219:79021_1:N:0:GGCTAC Contig617493 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20427:79662_1:N:0:GGCTAC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:1195:80017_1:N:0:GGCTAC Contig77186 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20405:80336_1:N:0:GGCTAC Contig132152 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:11107:81784_1:N:0:GGCTAC Contig571037 102 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:6475:84486_1:N:0:GGCTAC Contig455576 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:8944:84734_1:N:0:GGCTAC Contig566930 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20748:84613_1:N:0:AGCTAC Contig113189 9380 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:16306:85042_1:N:0:GGCTAC Contig113375 1686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:12938:86142_1:N:0:GGCTAC Contig9212 3156 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:12634:86328_1:N:0:GGCTAC Contig523940 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2941:86915_1:N:0:GGCTAC Contig538223 407 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17273:88161_1:N:0:GGCTAC Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17549:88950_1:N:0:AGCTAC Contig125278 3051 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17129:90177_1:N:0:GGCTAC Contig28910 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:3039:91331_1:N:0:AGCTAC Contig91898 1631 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2588:92638_1:N:0:GGCTAC Contig396501 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:2249:93105_1:N:0:GGCTAC Contig585564 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:19552:93423_1:N:0:GGCTAC Contig611301 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:9111:95061_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20143:95237_1:N:0:GGCTAC Contig346810 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:20459:95449_1:N:0:GGCTAC Contig156709 1165 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:19426:95951_1:N:0:GGCTAC Contig393086 219 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:15140:96109_1:N:0:GGCTAC Contig501995 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:10229:97195_1:N:0:AGCTAC Contig695752 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:15024:97952_1:N:0:GGCTAC Contig215392 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1104:17146:100004_1:N:0:GGCTAC Contig199221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11540:3324_1:N:0:GGCTAC Contig205365 798 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17439:3503_1:N:0:GGCTAC Contig187358 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17088:3867_1:N:0:GGCTAC Contig18716 78247 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5598:5101_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10985:5290_1:N:0:GGCTAC Contig328969 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8963:5984_1:N:0:GGCTAC Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1320:6883_1:N:0:GGCTAC Contig144960 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8998:7899_1:N:0:GGCTAC Contig13162 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16613:9716_1:N:0:GGCTAC Contig443318 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5219:9978_1:N:0:GGCTAC Contig67464 13173 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:20992:10119_1:N:0:GGCTAC Contig496352 375 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7122:12391_1:N:0:AGCTAC Contig529578 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17578:13111_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17370:13272_1:N:0:GGCTAC Contig370565 82 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18712:13812_1:N:0:GGCTAC Contig672122 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7616:14096_1:N:0:GGCTAC Contig540856 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17653:14019_1:Y:0:GGCTAC Contig686974 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10053:14777_1:N:0:GGCTAC Contig151085 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10391:15326_1:N:0:GGCTAC Contig220441 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10079:15603_1:N:0:GGCTAC Contig50451 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8471:15903_1:N:0:GGCTAC Contig499018 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18022:16688_1:N:0:GGCTAC Contig11067 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6590:19126_1:N:0:GGCTAC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18642:19531_1:N:0:GGCTAC Contig9115 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5786:20115_1:N:0:GGCTAC Contig211686 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6982:21046_1:N:0:GGCTAC Contig647292 139 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8720:21163_1:N:0:AGCTAC Contig383229 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3205:21271_1:N:0:GGCTAC Contig585564 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7018:21338_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3393:21790_1:N:0:GGCTAC Contig325887 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1791:22297_1:N:0:GGCTAC Contig58165 2665 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10999:24686_1:N:0:GGCTAC Contig424300 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15750:24674_1:N:0:GGCTAC Contig3758 2745 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17879:25135_1:N:0:GGCTAC Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7312:25428_1:N:0:AGCTAC Contig546574 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:12749:25362_1:N:0:GGCTAC Contig393387 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15560:25340_1:N:0:GGCTAC Contig393611 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13309:26191_1:N:0:GGCTAC Contig48907 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7324:26395_1:Y:0:GGCTAC Contig405581 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7614:26505_1:N:0:GGCTAC Contig165074 801 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10167:29850_1:N:0:GGCTAC Contig123259 1531 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18014:31468_1:N:0:GGCTAC Contig43880 6706 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:2105:31647_1:N:0:GGCTAC Contig501279 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:4335:32889_1:N:0:GGCTAC Contig48146 10268 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:12726:33003_1:N:0:GGCTAC Contig131043 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:19512:33672_1:N:0:GGCTAC Contig108161 5759 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13484:34472_1:N:0:GGCTAC Contig587005 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:2310:34978_1:Y:0:AGCTAC Contig215786 981 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6109:34967_1:N:0:GGCTAC Contig83611 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8491:35542_1:N:0:GGCTAC Contig162678 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18230:36939_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:2799:39365_1:N:0:GGCTAC Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7417:40269_1:N:0:GGCTAC Contig645560 109 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6859:41082_1:N:0:GGCTAC Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17305:41560_1:N:0:GGCTAC Contig455594 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16312:41790_1:N:0:GGCTAC Contig525263 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:19691:42642_1:N:0:GGCTAC Contig606727 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16937:43107_1:N:0:GGCTAC Contig540856 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8912:43796_1:N:0:GGCTAC Contig16579 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17137:44269_1:N:0:GGCTAC Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:9382:44734_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:20445:44999_1:N:0:GGCTAC Contig50880 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:21052:45258_1:N:0:GGCTAC Contig26938 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:19312:46017_1:N:0:GGCTAC Contig215392 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17530:48387_1:N:0:GGCTAC Contig37938 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7745:48686_1:N:0:GGCTAC Contig258676 69 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8879:49078_1:N:0:GGCTAC Contig44935 2058 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1954:49616_1:N:0:GGCTAC Contig542597 135 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18528:50756_1:N:0:AGCTAC Contig506709 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5710:51175_1:N:0:GGCTAC Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1854:52240_1:N:0:GGCTAC Contig1221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:4971:52199_1:N:0:GGCTAC Contig166304 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6492:52023_1:N:0:AGCTAC Contig449421 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11104:54017_1:N:0:GGCTAC Contig426846 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:14833:59200_1:N:0:GGCTAC Contig360647 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:14859:59478_1:N:0:CGCTAC Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6547:59662_1:N:0:GGCTAC Contig125278 3049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:14726:59553_1:N:0:GGCTAC Contig74333 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13667:60092_1:N:0:GGCTAC Contig501915 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3991:60457_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5465:62326_1:N:0:GGCTAC Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8578:62567_1:N:0:GGCTAC Contig33716 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:12579:62711_1:N:0:GGCTAC Contig24063 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3536:63223_1:N:0:GGCTAC Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15989:63463_1:N:0:AGCTAC Contig61927 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:12173:63611_1:N:0:GGCTAC Contig22621 6888 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13122:63893_1:N:0:GGCTAC Contig630382 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8609:64918_1:N:0:AGCTAC Contig164743 1154 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:2593:67710_1:N:0:GGCTAC Contig6657 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16497:68418_1:Y:0:GGCTAC Contig529785 169 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17918:68769_1:Y:0:GGCTAC Contig127313 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:4213:69335_1:N:0:GGCTAC Contig656558 94 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7500:69619_1:N:0:GGCTAC Contig212284 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1757:71676_1:N:0:GGCTAC Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11864:72610_1:Y:0:GGCTAC Contig161344 431 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7457:73378_1:N:0:GGCTAC Contig177964 770 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:14160:73265_1:N:0:GGCTAC Contig490770 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5850:74712_1:N:0:GGCTAC Contig369717 85 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:19171:74711_1:N:0:GGCTAC Contig645560 109 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:4603:75109_1:N:0:GGCTAC Contig286136 111 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3971:76853_1:N:0:GGCTAC Contig438688 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:5396:77062_1:N:0:GGCTAC Contig174710 409 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3599:77741_1:N:0:GGCTAC Contig101658 9109 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:14634:77799_1:N:0:AGCTAC Contig647954 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:9668:78066_1:N:0:GGCTAC Contig144517 874 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3190:78569_1:N:0:GGCTAC Contig215392 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3230:79948_1:N:0:GGCTAC Contig289013 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11042:79996_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:3359:80641_1:N:0:GGCTAC Contig1221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13933:80618_1:N:0:GGCTAC Contig114160 1042 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:4928:81059_1:N:0:GGCTAC Contig678904 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:20669:81101_1:N:0:GGCTAC Contig49739 5161 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18271:82153_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16285:82585_1:N:0:GGCTAC Contig558312 118 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10340:83819_1:N:0:GGCTAC Contig645270 202 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1118:84566_1:Y:0:GGCTAC Contig56997 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15698:84666_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7591:85862_1:Y:0:GGCTAC Contig48449 5296 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:4086:86361_1:N:0:GGCTAC Contig442105 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:12338:87134_1:N:0:GGCTAC Contig282466 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18179:87081_1:N:0:GGCTAC Contig540856 93 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16355:89079_1:Y:0:GGCTAC Contig234171 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15101:89277_1:N:0:GGCTAC Contig88172 2575 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15018:89298_1:N:0:GGCTAC Contig138423 7685 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6148:91081_1:N:0:GGCTAC Contig271201 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13527:91220_1:N:0:GGCTAC Contig190401 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:12679:91398_1:N:0:GGCTAC Contig674066 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:17084:91400_1:N:0:AGCTAC Contig16579 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16759:91778_1:N:0:GGCTAC Contig138423 7686 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:18413:92617_1:N:0:GGCTAC Contig314563 76 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:6357:93819_1:N:0:GGCTAC Contig590763 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:16762:94027_1:N:0:GGCTAC Contig170690 1020 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:8055:94410_1:N:0:GGCTAC Contig501279 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:1114:94877_1:N:0:NGCTAC Contig316024 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:15878:94972_1:Y:0:GGCTAC Contig145453 2320 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10518:95058_1:N:0:GGCTAC Contig469492 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:13063:96927_1:N:0:GGCTAC Contig168498 593 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11159:97974_1:N:0:GGCTAC Contig544105 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11534:97890_1:N:0:GGCTAC Contig448024 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:10007:98104_1:N:0:GGCTAC Contig216707 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:7776:98398_1:N:0:GGCTAC Contig12186 347 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:11946:99877_1:N:0:GGCTAC Contig53330 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1105:19380:100290_1:N:0:GGCTAC Contig157385 1106 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:18719:2515_1:N:0:GGCTAC Contig419427 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:18524:3073_1:N:0:GGCTAC Contig360647 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:17835:4565_1:N:0:GGCTAC Contig298422 110 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:18236:5067_1:N:0:GGCTAC Contig364325 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:17040:6289_1:N:0:GGCTAC Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:17716:7538_1:N:0:GGCTAC Contig618614 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:1445:8075_1:N:0:GGCTAC Contig148751 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:16172:8463_1:N:0:GGCTAC Contig62704 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:12577:8545_1:Y:0:GGCTAC Contig25055 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:10601:9377_1:N:0:GGCTAC Contig114989 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:16227:9656_1:N:0:GGCTAC Contig477840 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:8231:9837_1:N:0:GGCTAC Contig96628 1443 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:18651:10909_1:N:0:AGCTAC Contig316168 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:19484:10780_1:N:0:GGCTAC Contig235004 649 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:14371:11288_1:N:0:GGCTAC Contig5906 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:18132:11796_1:N:0:GGCTAC Contig587005 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:1717:12004_1:N:0:GGCTAC Contig187358 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:10618:12737_1:N:0:GGCTAC Contig201334 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:5924:13221_1:N:0:GGCTAC Contig71648 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:8248:13028_1:N:0:GGCTAC Contig657013 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:19388:13615_1:N:0:GGCTAC Contig94812 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:2688:13851_1:N:0:GGCTAC Contig385276 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:2474:15588_1:N:0:GGCTAC Contig598681 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:11402:16646_1:Y:0:GGCTAC Contig69363 2719 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:16192:16694_1:N:0:GGCTAC Contig1221 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:19552:16757_1:N:0:GGCTAC Contig52644 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:7099:17653_1:N:0:GGCTAC Contig3611 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:3321:17814_1:N:0:AGCTAC Contig464396 4661 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:3543:17764_1:N:0:GGCTAC Contig52115 2644 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:15639:17895_1:N:0:GGCTAC Contig18716 78248 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:7007:18310_1:N:0:GGCTAC Contig13730 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:16829:19081_1:N:0:GGCTAC Contig540583 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:9740:20742_1:N:0:GGCTAC Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:9085:20801_1:Y:0:GGCTAC Contig538735 162 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:18430:21044_1:N:0:GGCTAC Contig175398 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:20117:22188_1:N:0:TGCTAC Contig215392 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:12688:23633_1:N:0:GGCTAC Contig474092 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:9619:25217_1:N:0:GGCTAC Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:12168:26119_1:N:0:GGCTAC Contig306337 166 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:5866:26444_1:N:0:GGCTAC Contig665373 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:16020:27065_1:N:0:GGCTAC Contig126695 3026 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1106:8648:28076_1:N:0:GGCTAC Contig53128 14628 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 681568 (68.16%) aligned 0 times 113924 (11.39%) aligned exactly 1 time 204508 (20.45%) aligned >1 times 31.84% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 629367 (62.94%) aligned 0 times 123904 (12.39%) aligned exactly 1 time 246729 (24.67%) aligned >1 times 37.06% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 629688 (62.97%) aligned 0 times 122635 (12.26%) aligned exactly 1 time 247677 (24.77%) aligned >1 times 37.03% overall alignment rate 1000000 reads; of these: 1000000 (100.00%) were unpaired; of these: 682278 (68.23%) aligned 0 times 113653 (11.37%) aligned exactly 1 time 204069 (20.41%) aligned >1 times 31.77% overall alignment rate Processed 1000000 sequences so far Successfully deleted the temporary files zr1394_11_s456_trimmed.fq.gz_C_to_T.fastq and zr1394_11_s456_trimmed.fq.gz_G_to_A.fastq Final Alignment report ====================== Sequences analysed in total: 1000000 Number of alignments with a unique best hit from the different alignments: 304722 Mapping efficiency: 30.5% Final Cytosine Methylation Report ================================= Total number of C's analysed: 1943271 Total methylated C's in CpG context: 346776 Total methylated C's in CHG context: 8887 Total methylated C's in CHH context: 91070 Total methylated C's in Unknown context: 73 Total unmethylated C's in CpG context: 55685 Total unmethylated C's in CHG context: 389558 Total unmethylated C's in CHH context: 1051295 Total unmethylated C's in Unknown context: 366 C methylated in CpG context: 86.2% C methylated in CHG context: 2.2% C methylated in CHH context: 8.0% C methylated in Unknown context (CN or CHN): 16.6% Bismark completed in 0d 3h 32m 21s ==================== Bismark run complete ==================== Single-core mode: setting pid to 1 Single-end alignments will be performed ======================================= Input file is in FastQ format gzip: stdout: Broken pipe Processing reads up to sequence no. 1000000 from /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_12_s456_trimmed.fq.gz Writing a C -> T converted version of the input file zr1394_12_s456_trimmed.fq.gz to zr1394_12_s456_trimmed.fq.gz_C_to_T.fastq Writing a G -> A converted version of the input file zr1394_12_s456_trimmed.fq.gz to zr1394_12_s456_trimmed.fq.gz_G_to_A.fastq Created C -> T as well as G -> A converted versions of the FastQ file zr1394_12_s456_trimmed.fq.gz (1000001 sequences in total) Input files are zr1394_12_s456_trimmed.fq.gz_C_to_T.fastq and zr1394_12_s456_trimmed.fq.gz_G_to_A.fastq (FastQ) Now running 4 individual instances of Bowtie 2 against the bisulfite genome of /home/sam/data/oly_methylseq/oly_genome/ with the specified options: -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals Now starting the Bowtie 2 aligner for CTreadCTgenome (reading in sequences from zr1394_12_s456_trimmed.fq.gz_C_to_T.fastq with options -q --score-min L,0,-0.2 -p 16 --reorder --ignore-quals --norc) Using Bowtie 2 index: /home/sam/data/oly_methylseq/oly_genome/Bisulfite_Genome/CT_conversion/BS_CT Found first alignment: HWI-C00124:164:C7URDANXX:1:1101:1130:2172_1:N:0:CTTGTA 4 * 0 0 * * 0 0 TTTTTTGGTTGGATGTAATAGATTATGATTG BFB/FF//FF////7/>> Writing bisulfite mapping results to zr1394_12_s456_trimmed_bismark_bt2.bam <<< gzip: stdout: Broken pipe Reading in the sequence file /home/sam/analyses/20180503_oly_methylseq_trimgalore/zr1394_12_s456_trimmed.fq.gz Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19894:2316_1:N:0:CTTGTA Contig174714 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18885:2531_1:Y:0:CTTGTA Contig309740 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8003:2961_1:N:0:CTTGTA Contig32976 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13790:2989_1:N:0:CTTTTA Contig648930 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3515:3328_1:N:0:CTTGTA Contig240419 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2105:3914_1:N:0:CTTGTA Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14044:4845_1:N:0:CTTGTA Contig140835 1267 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10752:5040_1:N:0:CTTGTA Contig58165 2664 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17058:5640_1:Y:0:CTTTTA Contig140866 1241 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9009:6532_1:N:0:CTTGTA Contig403687 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2602:7662_1:N:0:CTTGTA Contig501603 107 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17713:7521_1:N:0:CTTGTA Contig96916 2520 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1321:7910_1:N:0:CTTGTA Contig638593 75 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14048:9229_1:N:0:CTTGTA Contig585564 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1756:10210_1:N:0:CTTGTA Contig255093 127 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13363:10456_1:N:0:CTTGTA Contig45395 31218 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15636:10920_1:N:0:CTTGTA Contig8057 8187 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3370:11148_1:N:0:CTTGTA Contig406108 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5008:11325_1:N:0:CTTGTA Contig643484 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8025:13510_1:N:0:CTTGTA Contig668575 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11814:14495_1:N:0:CTTGTA Contig69965 4741 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15515:15056_1:N:0:CTTGTA Contig4083 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15296:16640_1:N:0:CTTGTA Contig29514 5391 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17099:16525_1:N:0:CTTGTA Contig647199 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4904:17891_1:N:0:CTTGTA Contig587871 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15008:17956_1:N:0:CTTGTA Contig67071 5928 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4774:18022_1:N:0:CTTGTA Contig660197 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15941:18098_1:N:0:CTTGTA Contig542660 96 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10410:18480_1:N:0:CTTGTA Contig352230 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5071:19051_1:N:0:CTTGTA Contig66125 9277 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17834:20467_1:N:0:CTTGTA Contig368522 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20620:20618_1:N:0:CTTGTA Contig135245 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10863:21668_1:N:0:CTTGTA Contig165158 1106 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:21286:23550_1:N:0:CTTGTA Contig466367 85 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:21037:25674_1:N:0:CTTGTA Contig585393 430 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9716:25806_1:N:0:CTTGTA Contig66484 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16540:25815_1:N:0:CTTGTA Contig622011 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7239:27397_1:N:0:CTTGTA Contig87822 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16061:27552_1:N:0:CTTGTA Contig79291 1945 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20905:28236_1:N:0:CTTGTA Contig416683 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9038:28857_1:N:0:CTTGTA Contig3510 6634 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13463:29134_1:N:0:TTTGTA Contig88381 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8995:29268_1:N:0:CTTGTA Contig471935 78 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11000:30781_1:N:0:CTTGTA Contig397385 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14138:30880_1:Y:0:CTTGTA Contig480629 77 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17066:30935_1:N:0:CTTGTA Contig40240 1815 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15361:31451_1:N:0:CTTGTA Contig579818 100 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18632:31353_1:N:0:CTTGTA Contig79166 2911 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4979:32011_1:N:0:CTTGTA Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1351:34962_1:N:0:CTTGTA Contig440652 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16477:35590_1:N:0:CTTGTA Contig385355 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20313:35903_1:N:0:CTTGTA Contig233955 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5947:36820_1:N:0:CTTGTA Contig13994 528 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7546:38162_1:N:0:CTTGTA Contig358871 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4373:38447_1:N:0:CTTGTA Contig419979 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9346:38699_1:N:0:CTTGTA Contig476846 81 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10156:38898_1:N:0:CTTGTA Contig118420 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11512:39957_1:N:0:CTTGTA Contig403687 241 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2316:40129_1:N:0:CTTGTA Contig598097 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16224:40446_1:N:0:CTTGTA Contig673502 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:21056:41055_1:N:0:CTTGTA Contig77590 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20595:41355_1:N:0:CTTGTA Contig662194 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9843:42851_1:N:0:CTTGTA Contig534390 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1629:45200_1:Y:0:CTTGTA Contig189000 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7836:46781_1:N:0:CTTGTA Contig128909 3375 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16313:47416_1:N:0:CTTGTA Contig297179 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12476:47823_1:Y:0:CTTGTA Contig615097 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10519:48347_1:N:0:CTTGTA Contig487437 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8196:48516_1:N:0:CTTGTA Contig322052 402 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7775:50010_1:Y:0:CTTGTA Contig73118 3145 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14251:50460_1:N:0:CTTGTA Contig8057 8187 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12370:50759_1:N:0:CTTGTA Contig445420 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3597:53002_1:N:0:CTTGTA Contig450203 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6514:53017_1:N:0:CTTGTA Contig536788 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9095:53043_1:N:0:CTTGTA Contig564182 119 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10046:56678_1:N:0:CTTGTA Contig498260 1019 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9145:57077_1:N:0:CTTGTA Contig8057 8187 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11729:57332_1:N:0:CTTGTA Contig581536 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13884:57760_1:N:0:CTTGTA Contig24949 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11551:58490_1:N:0:CTTGTA Contig76372 4475 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18920:58571_1:Y:0:CTTGTA Contig133326 1998 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14295:59576_1:N:0:CTTGTA Contig192988 1669 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20703:60400_1:N:0:CTTGTA Contig73114 9287 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13491:60516_1:N:0:CTTGTA Contig76123 2723 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15130:61704_1:N:0:CTTGTA Contig58165 2666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13464:62127_1:N:0:CTTGTA Contig211823 4753 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13598:62378_1:N:0:CTTGTA Contig176296 1066 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16428:62685_1:N:0:CTTGTA Contig474818 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19685:64066_1:N:0:CTTGTA Contig248177 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3205:64978_1:N:0:CTTGTA Contig429218 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15881:64837_1:N:0:CTTGTA Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11875:65363_1:N:0:CTTGTA Contig213739 1425 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19109:66375_1:N:0:CTTGTA Contig673642 187 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6838:66537_1:N:0:CTTGTA Contig617493 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17952:66670_1:N:0:CTTGTA Contig180820 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2856:67396_1:N:0:CTTGTA Contig664808 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:16895:70082_1:N:0:CTTGTA Contig288352 86 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20083:70897_1:N:0:CTTGTA Contig272235 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:20623:72129_1:N:0:CTTGTA Contig296481 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6070:73200_1:N:0:CTTGTA Contig53767 3497 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12380:73383_1:N:0:CTTGTA Contig618226 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:18570:74806_1:N:0:CTTGTA Contig494437 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:6932:77189_1:N:0:CTTGTA Contig106215 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1838:77466_1:N:0:CTTGTA Contig90933 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:5470:79010_1:N:0:CTTGTA Contig314528 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:13755:79105_1:Y:0:CTTGTA Contig142624 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10218:79600_1:N:0:CTTGTA Contig125396 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8892:80664_1:N:0:CTTGTA Contig248331 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:15974:80692_1:N:0:CTTGTA Contig527169 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1803:81086_1:N:0:CTTGTA Contig127394 5049 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4782:81867_1:N:0:CGTGTA Contig273760 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8114:82882_1:N:0:CTTGTA Contig70429 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1625:83952_1:N:0:CTTGTA Contig62815 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7530:83814_1:N:0:CTTGTA Contig562000 549 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:9905:83832_1:N:0:CTTGTA Contig166413 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:14729:84765_1:N:0:CTTGTA Contig419979 79 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19037:88067_1:N:0:CTTGTA Contig347662 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4994:89011_1:N:0:CTTGTA Contig562041 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17111:89009_1:N:0:CTTGTA Contig347876 93 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8068:90446_1:Y:0:CTTGTA Contig189495 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11499:90378_1:Y:0:CTTGTA Contig84407 10362 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:10908:90724_1:N:0:CTTGTA Contig192988 1666 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8593:90804_1:N:0:CTTGTA Contig320635 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:19334:91421_1:N:0:CTTGTA Contig195226 422 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4007:92274_1:N:0:CTTGTA Contig128149 1465 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7540:92674_1:N:0:CTTGTA Contig54452 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1409:93385_1:N:0:CTTGTA Contig273760 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11922:93392_1:N:0:CTTGTA Contig4032 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7524:93648_1:N:0:CTTGTA Contig28913 2783 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7394:93970_1:N:0:CTTGTA Contig25082 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:1767:95086_1:N:0:CTTGTA Contig515495 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:2304:95154_1:N:0:CTTGTA Contig16728 3541 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3758:95407_1:Y:0:CTTGTT Contig1221 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:4355:96575_1:N:0:CTTGTA Contig81425 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12631:97044_1:N:0:CTTGTA Contig437004 1076 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3211:97702_1:N:0:CTTGTA Contig333205 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:3983:97534_1:N:0:CTTGTA Contig119692 762 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:11697:98497_1:Y:0:CTTGTA Contig573992 104 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:12083:98596_1:N:0:CTTGTA Contig487350 101 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:7722:99236_1:N:0:CTTGTA Contig234397 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:17172:99237_1:N:0:CTTGAA Contig30655 1640 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1101:8895:100010_1:N:0:CTTGTA Contig494837 105 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12401:3095_1:N:0:CTTGTA Contig282460 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15569:3237_1:N:0:CTTGTA Contig598386 595 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7904:3487_1:N:0:CTTGTA Contig421493 139 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2068:5284_1:Y:0:CTTGTA Contig562765 87 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10722:6861_1:N:0:CTTGTA Contig150701 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13583:8810_1:N:0:CTTGTA Contig72676 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8796:9063_1:N:0:TTTGTA Contig31473 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14492:10136_1:N:0:CTTGTA Contig50415 19090 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6827:10657_1:N:0:CTTGTA Contig176831 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14966:11338_1:N:0:CTTGTA Contig33162 30897 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18802:11367_1:N:0:CTTGTA Contig46948 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14050:12502_1:N:0:CTTGTA Contig539956 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18220:12737_1:N:0:CTTGTA Contig86685 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2724:13571_1:N:0:CTTGTA Contig600466 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3093:13752_1:N:0:CTTGTA Contig8392 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8209:14800_1:N:0:CTTGTA Contig294721 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20040:14762_1:N:0:CTTGTA Contig447977 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5031:15307_1:N:0:CTTGTA Contig454143 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15392:15799_1:N:0:CTTGTA Contig409896 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11518:16744_1:N:0:CTTGTA Contig306533 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20177:16840_1:N:0:CTTGTA Contig448024 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9412:17065_1:N:0:CTTGTA Contig3510 6634 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16263:17689_1:N:0:CTTGTA Contig322052 402 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17066:17932_1:N:0:CTTGTA Contig296281 186 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10286:20165_1:N:0:CTTGTA Contig314765 92 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10944:20351_1:N:0:CTTGTA Contig511006 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:21113:22324_1:N:0:CTTGTA Contig46387 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2811:22830_1:N:0:CTTGTA Contig269558 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5428:23203_1:N:0:CTTGTA Contig160906 726 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5290:25409_1:N:0:CTTGTA Contig551859 96 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8822:25832_1:N:0:CTTGTA Contig406236 98 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17446:26066_1:N:0:CTTGTA Contig90138 12437 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2203:28024_1:N:0:CTTGTA Contig138394 1206 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15430:28989_1:N:0:CTTGTA Contig88030 2169 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2504:29040_1:N:0:CTTGTA Contig58829 4269 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15778:29118_1:Y:0:CTTGTA Contig52056 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15271:31192_1:N:0:CTTGTA Contig312699 83 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9851:32114_1:N:0:CTTGTA Contig284284 70 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4046:32493_1:N:0:CTTGTA Contig613233 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8649:32476_1:N:0:CTTGTA Contig105734 8077 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11884:32475_1:N:0:CTTGTA Contig46471 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5234:34918_1:N:0:CTTGTA Contig203707 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7776:35607_1:N:0:CTTGTA Contig221491 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:21237:36626_1:N:0:CTTGTA Contig674066 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14106:39768_1:N:0:CTTGTA Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2273:42121_1:N:0:CTTGTA Contig91220 7580 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13348:42057_1:N:0:CTTGTA Contig262974 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1356:42410_1:N:0:CTTGTA Contig523940 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6630:42489_1:N:0:CTTGTA Contig155975 2598 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13409:42270_1:N:0:CTTGTA Contig389420 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18004:42383_1:N:0:CTTGTA Contig674752 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4564:42638_1:N:0:CTTGTA Contig158089 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5490:43539_1:N:0:CTTGTA Contig159318 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19849:44138_1:N:0:TTTGTA Contig122688 736 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5680:44504_1:N:0:CTTGTA Contig7715 7903 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10411:44790_1:N:0:CTTGTA Contig513214 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6411:45089_1:N:0:CTTGTA Contig45483 25334 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17556:45645_1:N:0:CTTGTA Contig562041 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5915:47490_1:N:0:CTTGTA Contig426079 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12523:47362_1:N:0:CTTGTA Contig25082 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11176:47936_1:N:0:CTTGTA Contig465244 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10780:48494_1:N:0:CTTGTA Contig521356 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20914:49283_1:N:0:CTTGTA Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4189:50347_1:Y:0:CTTGTA Contig581536 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19668:50371_1:N:0:CTTGTA Contig282958 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6911:51988_1:N:0:CTTGTA Contig505908 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9447:51902_1:Y:0:CTTGTA Contig84290 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20381:51771_1:N:0:CTTGTA Contig239075 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:1323:53003_1:N:0:CTTGTA Contig559806 259 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12314:53879_1:N:0:CTTGTA Contig37313 158 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9469:54552_1:Y:0:CTTGTA Contig397915 72 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16641:55053_1:N:0:CTTGTA Contig601336 252 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17153:55073_1:N:0:CTTGTA Contig390002 165 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18696:55322_1:Y:0:CTTGTA Contig19409 7646 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12498:55810_1:N:0:CTTGTA Contig35786 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11855:56769_1:N:0:CTTGTA Contig461699 85 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5970:57361_1:N:0:CTTGTA Contig156879 506 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16580:57785_1:N:0:CTTGTA Contig427170 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2168:59249_1:N:0:CTTGTA Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17204:60974_1:Y:0:CTTGTA Contig200657 840 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13364:61822_1:N:0:CTTGTA Contig673283 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5389:62889_1:N:0:CTTGTA Contig557727 100 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18968:63451_1:N:0:CTTGTA Contig245061 95 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13776:63933_1:N:0:CTTGTA Contig91774 2259 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6338:64129_1:N:0:CTTGTA Contig96738 1298 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12954:64399_1:N:0:CTTGTA Contig43736 3408 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14984:66261_1:N:0:CTTGTA Contig449234 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17814:66673_1:N:0:CTTGTA Contig39170 9123 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15634:67502_1:N:0:CTTGTA Contig119718 870 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11106:68270_1:N:0:CTTGTA Contig427080 1115 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:8470:69075_1:N:0:CTTGAA Contig608747 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7383:69434_1:N:0:CTTGTA Contig476982 123 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18708:69865_1:N:0:CTTGTA Contig537336 73 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6648:70130_1:N:0:CTTGTA Contig588443 142 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12742:70031_1:N:0:CTTGTA Contig257409 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:12012:71262_1:N:0:CTTGTA Contig667476 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19219:71450_1:N:0:CTTGTA Contig338403 84 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:5212:71619_1:N:0:CTTGTA Contig212563 446 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17248:71958_1:N:0:CTTGTA Contig675564 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13960:73254_1:N:0:CTTGTA Contig363124 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11168:74355_1:N:0:CTTGTA Contig186816 493 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15865:75643_1:N:0:CTTGTA Contig15808 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13728:75829_1:N:0:CTTGTA Contig334719 122 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17097:76033_1:N:0:CTTGTA Contig393896 71 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:10913:76760_1:N:0:CTTGTA Contig595751 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:4767:77031_1:N:0:CTTGTA Contig552723 2759 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3396:77846_1:N:0:CTTGTA Contig233090 89 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2424:78852_1:N:0:CTTGTT Contig74242 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15845:79382_1:N:0:TTTGTA Contig43566 10024 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15953:79469_1:N:0:CTTGTA Contig131040 14111 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:11853:79599_1:N:0:CTTGTA Contig474704 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:9136:79819_1:N:0:CTTGTA Contig119417 2922 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14495:80492_1:N:0:CTTGTA Contig587005 80 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16187:81512_1:N:0:CTTGTA Contig75271 2595 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20630:82104_1:N:0:CTTGTT Contig275562 121 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19450:82341_1:N:0:CTTGTA Contig324165 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2006:83182_1:N:0:CTTGTA Contig76988 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17607:83160_1:N:0:CTTGTA Contig31504 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17841:83184_1:N:0:CTTGTA Contig64902 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17904:83872_1:N:0:CTTGTA Contig614733 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2682:84008_1:Y:0:CTTGTA Contig74987 24265 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:3947:84128_1:N:0:CTTGTA Contig4882 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:7858:84018_1:Y:0:CTTGTA Contig127394 5047 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:16196:84279_1:N:0:CTTGTA Contig125243 1014 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18174:87496_1:N:0:CTTGTA Contig183189 607 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13158:90812_1:N:0:CTTGTA Contig393611 91 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:13797:92910_1:N:0:CTTGTA Contig113390 987 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:15411:93078_1:N:0:CTTGTA Contig63056 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:6766:93597_1:N:0:CTTGTA Contig139112 1052 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2100:94364_1:N:0:CTTGTA Contig167526 950 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:18127:94512_1:N:0:CTTGTA Contig197727 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:20829:94795_1:N:0:CTTGTA Contig171283 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:2512:95464_1:N:0:CTTGTA Contig84561 1596 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:14486:95787_1:N:0:CTTGTA Contig119919 1 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:19880:97880_1:N:0:CTTGTA Contig657114 74 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17190:98801_1:N:0:CTTGTA Contig455848 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1102:17599:99019_1:N:0:CTTGTA Contig239672 88 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:15169:2769_1:N:0:CTTGTA Contig146075 2 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:11187:3080_1:N:0:CTTGTA Contig90154 3079 Chromosomal sequence could not be extracted for HWI-C00124:164:C7URDANXX:1:1103:4106:3345_1:N:0:CTTGTA Contig277899 2 Chromosomal seque