owl/Athaliana/20180515_oly_bowtie2_pbjelly_sjw_01_genome_index Bowtie2 genome index of the Olympia oyster genome assembly pbjelly_sjw_01. Run on Mox high performance computing node. See the GitHub wiki for more info on input assembly: https://github.com/RobertsLab/project-olympia.oyster-genomic/wiki/Genome-Assemblies See notebook entry for more info: http://onsnetwork.org/kubu4/2018/05/15/read-mapping-olympia-oyster-2brad-data-with-bowtie2 Files: - 20180515_oly_bowtie2_pbjelly_sjw_01_genome_index.sh: SLURM script file for job submission to Mox node. Contains specific commands used to run bowtie2-build command. - jelly.out.fasta: Input assembly FastA file (pbjelly_sjw_01). - oly_pbjelly_sjw_01_ref_bt2_index.out: bowtie2-build stdout. - pbjelly_sjw_01_ref*: Index files produced by bowtie2-build command. - slurm-174216.out: bowtie2-build sterr file (automatically generated/captured by Mox node)