Basic Statistics
Measure | Value |
---|---|
Filename | EPI-153_S4_L002_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 31826247 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 32 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 232694 | 0.7311386730581209 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGC | 58105 | 0.1825694371064235 | Illumina Single End PCR Primer 1 (100% over 49bp) |
CCCCAACACAACAACACACACCAAACAACAATCTATAAACTATTTAAAAC | 41113 | 0.12917954165315187 | No Hit |
GGCTGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 35641 | 0.1119861854902339 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCG | 32669 | 0.10264798108303502 | Illumina Single End PCR Primer 1 (100% over 48bp) |
GGCGGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 32462 | 0.10199757451766149 | Illumina Single End PCR Primer 1 (100% over 44bp) |