Basic Statistics
Measure | Value |
---|---|
Filename | EPI-187_S20_L003_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 26246829 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 30 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATG | 155650 | 0.593024018253786 | TruSeq Adapter, Index 7 (100% over 49bp) |
CAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTAT | 40724 | 0.15515779068016178 | TruSeq Adapter, Index 7 (100% over 48bp) |
GGTAATATTTGGGTTTTAATGGATATGTTAGTTGTTTTTTATATTTTTTG | 32698 | 0.12457885864993444 | No Hit |
CCAGCCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCT | 27309 | 0.1040468545743183 | TruSeq Adapter, Index 7 (100% over 43bp) |