Basic Statistics
Measure | Value |
---|---|
Filename | EPI-188_S21_L003_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24209277 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 32 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 279577 | 1.1548341571704102 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGC | 50633 | 0.2091470967926882 | Illumina Single End PCR Primer 1 (100% over 49bp) |
GGCGGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 44952 | 0.18568088588519185 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGGCGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 30035 | 0.12406401066830702 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCG | 27682 | 0.11434459608190696 | Illumina Single End PCR Primer 1 (100% over 48bp) |