Basic Statistics
Measure | Value |
---|---|
Filename | EPI-199_S24_L003_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18024873 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 32 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 130951 | 0.7265016513569887 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGC | 32761 | 0.18175440126540698 | Illumina Single End PCR Primer 1 (100% over 49bp) |
GGCGGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 32493 | 0.1802675669337587 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGGGGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 31658 | 0.17563507937060083 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCG | 18752 | 0.10403402010100153 | Illumina Single End PCR Primer 1 (100% over 48bp) |