Basic Statistics
Measure | Value |
---|---|
Filename | EPI-215_S31_L004_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24211042 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 31 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATG | 178479 | 0.7371801676276469 | TruSeq Adapter, Index 6 (100% over 49bp) |
CAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTAT | 39530 | 0.16327260924994472 | TruSeq Adapter, Index 6 (100% over 48bp) |
CCCGCCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCT | 36539 | 0.15091874195253555 | TruSeq Adapter, Index 6 (100% over 43bp) |
CCGCCCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCT | 26567 | 0.10973092360089251 | TruSeq Adapter, Index 6 (100% over 43bp) |