Basic Statistics
Measure | Value |
---|---|
Filename | EPI-215_S31_L004_R2_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 24211042 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 31 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC | 163986 | 0.6773190513650755 | Illumina Single End PCR Primer 1 (100% over 50bp) |
GAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGC | 34555 | 0.14272413388899163 | Illumina Single End PCR Primer 1 (100% over 49bp) |
GGCGGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 34199 | 0.14125373042597672 | Illumina Single End PCR Primer 1 (100% over 44bp) |
GGGCGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTG | 25131 | 0.10379974558715813 | Illumina Single End PCR Primer 1 (100% over 44bp) |